MS002724.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS002724.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Pentatricopeptide repeat-containing protein
Location	scaffold66: 31785 .. 34014 (-)
Sequence length	1443
RNA-Seq Expression	MS002724.1
Synteny	MS002724.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCGGCGTTAGCAATGTTCAAAATCTTAAGCAGGTCTTCGAATTTCGCGAGAACAGTGAGAACAGAGACAGATTCATTCTGTTCTCTGGTGTTGAGATTATACAGCACGAGACGAAACTGCAACCGAAGGAACCTCTTCGCGAGGATTAGTCCTCTCGGTGACCCTGAGCTCAGTGTAGTCCCGATTCTTGATCAGTGGATTGAGGAAGGCAGGAAGATCAAGGACTTTGAGCTCCGGAGAATCGTTCGCGACCTTCGTTCTGGCCGGCGGTATGGCCAAGCCCTCGAGGTGAGCGCAATTCAAATTTCTCCCTGGTTTTACCATTTTCCATTAAAGGAAGATTAGACTGTATATGGTGTCAGTTGGATGAGGAGCGATTTTAGTGGTTTATTGAATAATCGCAGGAGAGGATTTCGAAATCCCTGCTTGTGTTTATTCCTCTAGTCCTTTTATTAATTGCTGAAAATCCTGTGGAGGCAACAACCTAGAAATATACATTTTGGAATTTGAAGCAATCAAATTTAGTTTAGCTAACTGTGATTTTATTCCTTCATCTTCATTAAAACATGGTTCTGGAAATGTAATGTAGTTGAATTCTCGTTCCGGTCCAAATAATCATCCTTTCCAGTTTCCACAGAGGTAAATCTGGACTGCTGCTTGGCAAGAGGATGGCATATGTAATGTTATGTACAATTGTTGAATTCTTGTAGTTAGCTGAACACTAGGTTGATATCCTAATTCTTAAAGGTTACTGACGATTTCGTTTTTAAAGATTATGCCTACTTCCTCTCTCAATATCCTTAGCATGCTTTTCATCATTCTAGAAACATGTTTAATTTCAGAAACAAAAACAAGTTTTAAATACCACCATTTTTAGTTTTTAAATTTTGAAAATGTTATCAAAAAGTAGATAACAAACAAAAGAAAAAAAGTTGGAAATAGTGTTTATAAGCTAAAATTTCAAAAATTAAAAACTAAATAGTTATCAAACAGTGTGTTTAATCCATTTGATTTCATCAGTCCTAGATTTTTTTAGTTGATCGTTTGTTCTTCTCTTGGATTATTCTAATTGAAGGTGTCCGAATGGATGAGCAGCAAGGGACTTTTCCCCCTTACAACAAGAGACTTTGCTGTACAGCTTGATCTGATTGGCCGAGTTCGGGGGCTGGATTCTGCAGAGAAGTACTTCAGCAGTGTTTCTAACCAGGAGGAAATTGGTAAACTCTATGGTGCTCTTCTAAATTGTTATGTCAGGGAAGGCCTTGTAGATAAGTCCCTTGCCCATATGCAGGAGATGAAACAGATGGGTTTTGCTTCCACTCCCCTCAACTACAATGATATCATGTGTCTATATCTGAACACTGGCCACGTCGATAAAGTTCCGAACGTGCTGTCTGAAATGAAGGAGAATGGTGTTCTTCCTGACAATTTTAGCTATAGAATTTGCATCAATTCTTATGGAGCTAGGTCTGATCTGATCACTATGGAGAAGGTCTTGAAAGAAATGGAGAGCCAATCCCACATATCCATGGACTGGACTACATACTCAATGGTAGCCAATTTTTTCATAAAAGCCAGTATGCACGAAGAAGCACTGAATTACCTTCGAAAATGTGAGGACAAGGTAGACCGAGATGCGCTCGGATTCAATCATCTCATTTCGCTCTACACCAGTCTGGGACATAATGATGAAGTAATGAGACTGTGGGCCCTCCAGAAGGAGAAGTGTAAGAAGCAAGTCAATAGGGATTATATAACCATGTTGGGTTCCTTGGTAAAGCTCGAGCAGCTTGAGGAAGCTGAAAATCTGCTCAAGGAATGGGAGTCATCTTGCCAGTGTTACGATTTTCGAGTCCCGAACGTTCTCCTTATCGGTTACTCGCAAAAGGGGTTAATCGAAAGAGCTGAAAAGATGCTTAGGAGCATTGCCAGAGAAGGGAGAATCCCACCACCAAATAGTTGGGCCATTATTGCAGCAGGGTACTTGGAAAAACAGAACCTGGAGAAGGCTTTTAAGTGCATGAATGAAGCTCTTGCTTTAAAAGAGCAAAACAACGGGTGGAGGCCAAAACCTAGCGTTGTATCAAGCATTCTGCGATGGCTATCTGAAAATGGAAGATATGGGGAACTGAAAGAGTTTCTGAGCTCATTGAAGACTGTACCTTCCATGGATGGAAAACTACATAATGCCTTAGATGAGCTTGTGGAAACCTTAGAAAACGAC

mRNA sequence

ATGGCGGCGGCGTTAGCAATGTTCAAAATCTTAAGCAGGTCTTCGAATTTCGCGAGAACAGTGAGAACAGAGACAGATTCATTCTGTTCTCTGGTGTTGAGATTATACAGCACGAGACGAAACTGCAACCGAAGGAACCTCTTCGCGAGGATTAGTCCTCTCGGTGACCCTGAGCTCAGTGTAGTCCCGATTCTTGATCAGTGGATTGAGGAAGGCAGGAAGATCAAGGACTTTGAGCTCCGGAGAATCGTTCGCGACCTTCGTTCTGGCCGGCGGTATGGCCAAGCCCTCGAGGTGTCCGAATGGATGAGCAGCAAGGGACTTTTCCCCCTTACAACAAGAGACTTTGCTGTACAGCTTGATCTGATTGGCCGAGTTCGGGGGCTGGATTCTGCAGAGAAGTACTTCAGCAGTGTTTCTAACCAGGAGGAAATTGGTAAACTCTATGGTGCTCTTCTAAATTGTTATGTCAGGGAAGGCCTTGTAGATAAGTCCCTTGCCCATATGCAGGAGATGAAACAGATGGGTTTTGCTTCCACTCCCCTCAACTACAATGATATCATGTGTCTATATCTGAACACTGGCCACGTCGATAAAGTTCCGAACGTGCTGTCTGAAATGAAGGAGAATGGTGTTCTTCCTGACAATTTTAGCTATAGAATTTGCATCAATTCTTATGGAGCTAGGTCTGATCTGATCACTATGGAGAAGGTCTTGAAAGAAATGGAGAGCCAATCCCACATATCCATGGACTGGACTACATACTCAATGGTAGCCAATTTTTTCATAAAAGCCAGTATGCACGAAGAAGCACTGAATTACCTTCGAAAATGTGAGGACAAGGTAGACCGAGATGCGCTCGGATTCAATCATCTCATTTCGCTCTACACCAGTCTGGGACATAATGATGAAGTAATGAGACTGTGGGCCCTCCAGAAGGAGAAGTGTAAGAAGCAAGTCAATAGGGATTATATAACCATGTTGGGTTCCTTGGTAAAGCTCGAGCAGCTTGAGGAAGCTGAAAATCTGCTCAAGGAATGGGAGTCATCTTGCCAGTGTTACGATTTTCGAGTCCCGAACGTTCTCCTTATCGGTTACTCGCAAAAGGGGTTAATCGAAAGAGCTGAAAAGATGCTTAGGAGCATTGCCAGAGAAGGGAGAATCCCACCACCAAATAGTTGGGCCATTATTGCAGCAGGGTACTTGGAAAAACAGAACCTGGAGAAGGCTTTTAAGTGCATGAATGAAGCTCTTGCTTTAAAAGAGCAAAACAACGGGTGGAGGCCAAAACCTAGCGTTGTATCAAGCATTCTGCGATGGCTATCTGAAAATGGAAGATATGGGGAACTGAAAGAGTTTCTGAGCTCATTGAAGACTGTACCTTCCATGGATGGAAAACTACATAATGCCTTAGATGAGCTTGTGGAAACCTTAGAAAACGAC

Coding sequence (CDS)

ATGGCGGCGGCGTTAGCAATGTTCAAAATCTTAAGCAGGTCTTCGAATTTCGCGAGAACAGTGAGAACAGAGACAGATTCATTCTGTTCTCTGGTGTTGAGATTATACAGCACGAGACGAAACTGCAACCGAAGGAACCTCTTCGCGAGGATTAGTCCTCTCGGTGACCCTGAGCTCAGTGTAGTCCCGATTCTTGATCAGTGGATTGAGGAAGGCAGGAAGATCAAGGACTTTGAGCTCCGGAGAATCGTTCGCGACCTTCGTTCTGGCCGGCGGTATGGCCAAGCCCTCGAGGTGTCCGAATGGATGAGCAGCAAGGGACTTTTCCCCCTTACAACAAGAGACTTTGCTGTACAGCTTGATCTGATTGGCCGAGTTCGGGGGCTGGATTCTGCAGAGAAGTACTTCAGCAGTGTTTCTAACCAGGAGGAAATTGGTAAACTCTATGGTGCTCTTCTAAATTGTTATGTCAGGGAAGGCCTTGTAGATAAGTCCCTTGCCCATATGCAGGAGATGAAACAGATGGGTTTTGCTTCCACTCCCCTCAACTACAATGATATCATGTGTCTATATCTGAACACTGGCCACGTCGATAAAGTTCCGAACGTGCTGTCTGAAATGAAGGAGAATGGTGTTCTTCCTGACAATTTTAGCTATAGAATTTGCATCAATTCTTATGGAGCTAGGTCTGATCTGATCACTATGGAGAAGGTCTTGAAAGAAATGGAGAGCCAATCCCACATATCCATGGACTGGACTACATACTCAATGGTAGCCAATTTTTTCATAAAAGCCAGTATGCACGAAGAAGCACTGAATTACCTTCGAAAATGTGAGGACAAGGTAGACCGAGATGCGCTCGGATTCAATCATCTCATTTCGCTCTACACCAGTCTGGGACATAATGATGAAGTAATGAGACTGTGGGCCCTCCAGAAGGAGAAGTGTAAGAAGCAAGTCAATAGGGATTATATAACCATGTTGGGTTCCTTGGTAAAGCTCGAGCAGCTTGAGGAAGCTGAAAATCTGCTCAAGGAATGGGAGTCATCTTGCCAGTGTTACGATTTTCGAGTCCCGAACGTTCTCCTTATCGGTTACTCGCAAAAGGGGTTAATCGAAAGAGCTGAAAAGATGCTTAGGAGCATTGCCAGAGAAGGGAGAATCCCACCACCAAATAGTTGGGCCATTATTGCAGCAGGGTACTTGGAAAAACAGAACCTGGAGAAGGCTTTTAAGTGCATGAATGAAGCTCTTGCTTTAAAAGAGCAAAACAACGGGTGGAGGCCAAAACCTAGCGTTGTATCAAGCATTCTGCGATGGCTATCTGAAAATGGAAGATATGGGGAACTGAAAGAGTTTCTGAGCTCATTGAAGACTGTACCTTCCATGGATGGAAAACTACATAATGCCTTAGATGAGCTTGTGGAAACCTTAGAAAACGAC

Protein sequence

MAAALAMFKILSRSSNFARTVRTETDSFCSLVLRLYSTRRNCNRRNLFARISPLGDPELSVVPILDQWIEEGRKIKDFELRRIVRDLRSGRRYGQALEVSEWMSSKGLFPLTTRDFAVQLDLIGRVRGLDSAEKYFSSVSNQEEIGKLYGALLNCYVREGLVDKSLAHMQEMKQMGFASTPLNYNDIMCLYLNTGHVDKVPNVLSEMKENGVLPDNFSYRICINSYGARSDLITMEKVLKEMESQSHISMDWTTYSMVANFFIKASMHEEALNYLRKCEDKVDRDALGFNHLISLYTSLGHNDEVMRLWALQKEKCKKQVNRDYITMLGSLVKLEQLEEAENLLKEWESSCQCYDFRVPNVLLIGYSQKGLIERAEKMLRSIAREGRIPPPNSWAIIAAGYLEKQNLEKAFKCMNEALALKEQNNGWRPKPSVVSSILRWLSENGRYGELKEFLSSLKTVPSMDGKLHNALDELVETLEND

Homology

[Close]

BLAST of MS002724.1 vs. NCBI nr
Match: XP_022142737.1 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like [Momordica charantia])

HSP 1 Score: 955.7 bits (2469), Expect = 1.5e-274
Identity = 475/481 (98.75%), Postives = 477/481 (99.17%), Query Frame = 0


Query: 1   MAAALAMFKILSRSSNFARTVRTETDSFCSLVLRLYSTRRNCNRRNLFARISPLGDPELS 60
           MAAALAMFKILSRSSNF RTVRTETDSFCSLVLRLYSTRRNCNRRNLFARISPLGDPELS
Sbjct: 1   MAAALAMFKILSRSSNFERTVRTETDSFCSLVLRLYSTRRNCNRRNLFARISPLGDPELS 60

Query: 61  VVPILDQWIEEGRKIKDFELRRIVRDLRSGRRYGQALEVSEWMSSKGLFPLTTRDFAVQL 120
           VV ILDQWIEEGRKIKDFELRRIVRDLRS RRYGQALEVSEWMSSKGLFPLTTRDFAVQL
Sbjct: 61  VVQILDQWIEEGRKIKDFELRRIVRDLRSCRRYGQALEVSEWMSSKGLFPLTTRDFAVQL 120

Query: 121 DLIGRVRGLDSAEKYFSSVSNQEEIGKLYGALLNCYVREGLVDKSLAHMQEMKQMGFAST 180
           DLIGRVRGLDSAEKYFSSVSNQEEIGKLYGALLNCYVREGLVDKSL HMQEMKQMGFAST
Sbjct: 121 DLIGRVRGLDSAEKYFSSVSNQEEIGKLYGALLNCYVREGLVDKSLTHMQEMKQMGFAST 180

Query: 181 PLNYNDIMCLYLNTGHVDKVPNVLSEMKENGVLPDNFSYRICINSYGARSDLITMEKVLK 240
           PLNYNDIMCLYLNTGHVDKVPNVLSEMKENGVLPDNFSYRICINSYGARSDLITMEKVLK
Sbjct: 181 PLNYNDIMCLYLNTGHVDKVPNVLSEMKENGVLPDNFSYRICINSYGARSDLITMEKVLK 240

Query: 241 EMESQSHISMDWTTYSMVANFFIKASMHEEALNYLRKCEDKVDRDALGFNHLISLYTSLG 300
           EMESQSHISMDWTTYSMVANFFIKASMHEEALNYLRKCEDKVDRDALGFNHLISLYTSLG
Sbjct: 241 EMESQSHISMDWTTYSMVANFFIKASMHEEALNYLRKCEDKVDRDALGFNHLISLYTSLG 300

Query: 301 HNDEVMRLWALQKEKCKKQVNRDYITMLGSLVKLEQLEEAENLLKEWESSCQCYDFRVPN 360
           HNDEVMRLWALQKEKCKKQVNRDYITMLGSLVKLE+LEEAENLLKEWESSCQCYDFRVPN
Sbjct: 301 HNDEVMRLWALQKEKCKKQVNRDYITMLGSLVKLERLEEAENLLKEWESSCQCYDFRVPN 360

Query: 361 VLLIGYSQKGLIERAEKMLRSIAREGRIPPPNSWAIIAAGYLEKQNLEKAFKCMNEALAL 420
           VLLIGYSQKGLIERAEKMLRSIAREGRIPPPNSWAIIAAGYLEKQNLEKAFKCMNEALA+
Sbjct: 361 VLLIGYSQKGLIERAEKMLRSIAREGRIPPPNSWAIIAAGYLEKQNLEKAFKCMNEALAV 420

Query: 421 KEQNNGWRPKPSVVSSILRWLSENGRYGELKEFLSSLKTVPSMDGKLHNALDELVETLEN 480
           KEQNNGWRPKPSVVSSILRWLSENGRYGELKEFLSSLKTVPSMDGKLHNALDELVETLEN
Sbjct: 421 KEQNNGWRPKPSVVSSILRWLSENGRYGELKEFLSSLKTVPSMDGKLHNALDELVETLEN 480

Query: 481 D 482
           D
Sbjct: 481 D 481

[Close]

BLAST of MS002724.1 vs. NCBI nr
Match: XP_023545982.1 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 832.8 bits (2150), Expect = 1.5e-237
Identity = 412/482 (85.48%), Postives = 447/482 (92.74%), Query Frame = 0


Query: 1   MAAALAMFKIL-SRSSNFARTVRTETDSFCSLVLRLYSTRRNCNRRNLFARISPLGDPEL 60
           +AAALAMFKIL S SS F RT RTETD+FC + LRLYS RR CNRRNLFARISPLG PEL
Sbjct: 38  LAAALAMFKILRSFSSGFTRTARTETDAFCFVALRLYSARRTCNRRNLFARISPLGSPEL 97

Query: 61  SVVPILDQWIEEGRKIKDFELRRIVRDLRSGRRYGQALEVSEWMSSKGLFPLTTRDFAVQ 120
           SVVPILDQWI+EGR IKDFE+RRIVRDLR+ RRYGQALEVSEWM SKGLF  TTRDFAVQ
Sbjct: 98  SVVPILDQWIQEGRMIKDFEMRRIVRDLRNCRRYGQALEVSEWMRSKGLFSFTTRDFAVQ 157

Query: 121 LDLIGRVRGLDSAEKYFSSVSNQEEIGKLYGALLNCYVREGLVDKSLAHMQEMKQMGFAS 180
           LDLIGRV+GLDSAEKYFSSVSNQEEIGKLYGALLNCYVREGLVDK+L+HMQ+MK+MGFAS
Sbjct: 158 LDLIGRVQGLDSAEKYFSSVSNQEEIGKLYGALLNCYVREGLVDKALSHMQKMKEMGFAS 217

Query: 181 TPLNYNDIMCLYLNTGHVDKVPNVLSEMKENGVLPDNFSYRICINSYGARSDLITMEKVL 240
           +PL YNDIMCLYLNTG VDKVPNVLSEMKENGVLPDN+SYRICI+SYGARSDLI M KVL
Sbjct: 218 SPLCYNDIMCLYLNTGQVDKVPNVLSEMKENGVLPDNYSYRICISSYGARSDLIGMLKVL 277

Query: 241 KEMESQSHISMDWTTYSMVANFFIKASMHEEALNYLRKCEDKVDRDALGFNHLISLYTSL 300
           +EMESQ+HISMDWTTYSMVANFFIKA MHE+A++YLRKCEDKV++DALGFNHLISLYTSL
Sbjct: 278 REMESQTHISMDWTTYSMVANFFIKAGMHEQAMSYLRKCEDKVNQDALGFNHLISLYTSL 337

Query: 301 GHNDEVMRLWALQKEKCKKQVNRDYITMLGSLVKLEQLEEAENLLKEWESSCQCYDFRVP 360
           G  DEVMRLWALQK KCKKQVNRDYITMLG LVKLE LEEAE L+KEWESSC+CYDFRVP
Sbjct: 338 GRKDEVMRLWALQK-KCKKQVNRDYITMLGCLVKLEFLEEAEKLVKEWESSCECYDFRVP 397

Query: 361 NVLLIGYSQKGLIERAEKMLRSIAREGRIPPPNSWAIIAAGYLEKQNLEKAFKCMNEALA 420
           NVLLIGYSQ+GLIERAEKML++I  +GRIPPPNSW IIAAGYLEKQN E+AFKCM EA+A
Sbjct: 398 NVLLIGYSQRGLIERAEKMLQNIISDGRIPPPNSWGIIAAGYLEKQNPERAFKCMKEAVA 457

Query: 421 LKEQNNGWRPKPSVVSSILRWLSENGRYGELKEFLSSLKTVPSMDGKLHNALDELVETLE 480
           ++EQN GWRPKPSV+SSILRWLSENGRY ELKEFLSSLKTVPSMDGKL NA DEL+ETL+
Sbjct: 458 VQEQNKGWRPKPSVLSSILRWLSENGRYEELKEFLSSLKTVPSMDGKLSNAFDELLETLK 517

Query: 481 ND 482
           N+
Sbjct: 518 NN 518

[Close]

BLAST of MS002724.1 vs. NCBI nr
Match: XP_022989754.1 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 831.6 bits (2147), Expect = 3.4e-237
Identity = 413/482 (85.68%), Postives = 447/482 (92.74%), Query Frame = 0


Query: 1   MAAALAMFKIL-SRSSNFARTVRTETDSFCSLVLRLYSTRRNCNRRNLFARISPLGDPEL 60
           +AAALAMFKIL S SS F RT RTETD+FC + LRLYS RR CNRRNLFARISPLG PEL
Sbjct: 45  LAAALAMFKILRSFSSGFTRTARTETDAFCFVALRLYSARRTCNRRNLFARISPLGSPEL 104

Query: 61  SVVPILDQWIEEGRKIKDFELRRIVRDLRSGRRYGQALEVSEWMSSKGLFPLTTRDFAVQ 120
           SVVPILDQWI+EGR IKDFELRRIVRDLR+ RRYGQALEVSEWM SKGLF  TTRDFAVQ
Sbjct: 105 SVVPILDQWIQEGRMIKDFELRRIVRDLRNCRRYGQALEVSEWMRSKGLFSFTTRDFAVQ 164

Query: 121 LDLIGRVRGLDSAEKYFSSVSNQEEIGKLYGALLNCYVREGLVDKSLAHMQEMKQMGFAS 180
           LDLIGRV+GLDSAEKYFSSVSNQEE+GKLYGALLNCYVREGLVDK+L+HMQ+MK+MGFAS
Sbjct: 165 LDLIGRVQGLDSAEKYFSSVSNQEEMGKLYGALLNCYVREGLVDKALSHMQKMKEMGFAS 224

Query: 181 TPLNYNDIMCLYLNTGHVDKVPNVLSEMKENGVLPDNFSYRICINSYGARSDLITMEKVL 240
           +PL YNDIMCLYLNTG VDKVPNVLSEMKENGVLPDN+SYRICI+SYGARSDLI M KVL
Sbjct: 225 SPLCYNDIMCLYLNTGQVDKVPNVLSEMKENGVLPDNYSYRICISSYGARSDLIGMLKVL 284

Query: 241 KEMESQSHISMDWTTYSMVANFFIKASMHEEALNYLRKCEDKVDRDALGFNHLISLYTSL 300
           KEMESQ+HISMDWTTYSMVANFFIKA MHE+A++YLRKCEDKV++DALGFNHLISLYTSL
Sbjct: 285 KEMESQTHISMDWTTYSMVANFFIKAGMHEKAMSYLRKCEDKVNQDALGFNHLISLYTSL 344

Query: 301 GHNDEVMRLWALQKEKCKKQVNRDYITMLGSLVKLEQLEEAENLLKEWESSCQCYDFRVP 360
           G  DEVMRLWALQK KCKKQVNRDYITMLG LVKLE LEEAE L+KEW SSC+CYDFRVP
Sbjct: 345 GCKDEVMRLWALQK-KCKKQVNRDYITMLGCLVKLEFLEEAEKLVKEWVSSCECYDFRVP 404

Query: 361 NVLLIGYSQKGLIERAEKMLRSIAREGRIPPPNSWAIIAAGYLEKQNLEKAFKCMNEALA 420
           NVLLIGYS++GLIERAEKML++I  +GRIPPPNSW IIAAGYLEKQNLEKAFKCM EA+A
Sbjct: 405 NVLLIGYSKRGLIERAEKMLQNIISDGRIPPPNSWGIIAAGYLEKQNLEKAFKCMKEAVA 464

Query: 421 LKEQNNGWRPKPSVVSSILRWLSENGRYGELKEFLSSLKTVPSMDGKLHNALDELVETLE 480
           ++EQN GWRPKPSV+SSILRWLSENGRY ELKEFLSSLKTVPSMDGKL NA DEL+ETL+
Sbjct: 465 VQEQNKGWRPKPSVLSSILRWLSENGRYEELKEFLSSLKTVPSMDGKLSNAFDELLETLK 524

Query: 481 ND 482
           N+
Sbjct: 525 NN 525

[Close]

BLAST of MS002724.1 vs. NCBI nr
Match: KAG6600732.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 830.1 bits (2143), Expect = 9.8e-237
Identity = 411/482 (85.27%), Postives = 445/482 (92.32%), Query Frame = 0


Query: 1   MAAALAMFKIL-SRSSNFARTVRTETDSFCSLVLRLYSTRRNCNRRNLFARISPLGDPEL 60
           +AAALAMFKIL S SS F RT RTETD+FC + LRLYS RR CNRRNLFARISPLG PEL
Sbjct: 49  LAAALAMFKILRSFSSGFTRTARTETDAFCFVALRLYSARRTCNRRNLFARISPLGSPEL 108

Query: 61  SVVPILDQWIEEGRKIKDFELRRIVRDLRSGRRYGQALEVSEWMSSKGLFPLTTRDFAVQ 120
           SVVPILDQWI+EGR IKDFE+RRIVRDLR+ RRYGQAL+VSEWM SKGLF  TTRDFAVQ
Sbjct: 109 SVVPILDQWIQEGRMIKDFEMRRIVRDLRNCRRYGQALQVSEWMRSKGLFSFTTRDFAVQ 168

Query: 121 LDLIGRVRGLDSAEKYFSSVSNQEEIGKLYGALLNCYVREGLVDKSLAHMQEMKQMGFAS 180
           LDLIGRVRG+DSAEKYF SVSNQEEIGKLYGALLNCYVREGLVDK+L+HMQ+MK+MGFAS
Sbjct: 169 LDLIGRVRGIDSAEKYFGSVSNQEEIGKLYGALLNCYVREGLVDKALSHMQKMKEMGFAS 228

Query: 181 TPLNYNDIMCLYLNTGHVDKVPNVLSEMKENGVLPDNFSYRICINSYGARSDLITMEKVL 240
           +PL YNDIMCLYLNTG VDKVPNVLSEMK NGVLPDN+SYRICI+SYGARSDLI M KVL
Sbjct: 229 SPLCYNDIMCLYLNTGQVDKVPNVLSEMKVNGVLPDNYSYRICISSYGARSDLIGMLKVL 288

Query: 241 KEMESQSHISMDWTTYSMVANFFIKASMHEEALNYLRKCEDKVDRDALGFNHLISLYTSL 300
           KEMESQ+HISMDWTTYSMVANFFIKA MHE+A++YLRKCEDKV++DALGFNHLISLYTSL
Sbjct: 289 KEMESQTHISMDWTTYSMVANFFIKAGMHEKAMSYLRKCEDKVNQDALGFNHLISLYTSL 348

Query: 301 GHNDEVMRLWALQKEKCKKQVNRDYITMLGSLVKLEQLEEAENLLKEWESSCQCYDFRVP 360
           G  DEVMRLWALQK KCKKQVNRDYITMLG LVKLE LEEAE L+KEWESSC+CYDFRVP
Sbjct: 349 GRKDEVMRLWALQK-KCKKQVNRDYITMLGCLVKLEFLEEAEKLVKEWESSCECYDFRVP 408

Query: 361 NVLLIGYSQKGLIERAEKMLRSIAREGRIPPPNSWAIIAAGYLEKQNLEKAFKCMNEALA 420
           NVLLIGYSQKGLIERAEKML++I  +GRIPPPNSW IIAAGYLEKQN E+AFKCM EA+A
Sbjct: 409 NVLLIGYSQKGLIERAEKMLQNIISDGRIPPPNSWGIIAAGYLEKQNPERAFKCMKEAVA 468

Query: 421 LKEQNNGWRPKPSVVSSILRWLSENGRYGELKEFLSSLKTVPSMDGKLHNALDELVETLE 480
           ++EQN GWRPKPSV+SSILRWLSENGRY ELKEFLSSLKTVPSMDGKL NA DEL+ETL+
Sbjct: 469 VQEQNKGWRPKPSVLSSILRWLSENGRYEELKEFLSSLKTVPSMDGKLSNAFDELLETLK 528

Query: 481 ND 482
           N+
Sbjct: 529 NN 529

[Close]

BLAST of MS002724.1 vs. NCBI nr
Match: XP_022942045.1 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 828.9 bits (2140), Expect = 2.2e-236
Identity = 409/482 (84.85%), Postives = 446/482 (92.53%), Query Frame = 0


Query: 1   MAAALAMFKIL-SRSSNFARTVRTETDSFCSLVLRLYSTRRNCNRRNLFARISPLGDPEL 60
           +AAALAMFKIL S SS F RT RTETD+FC + LRLYS RR CNRRNLFARISPLG PEL
Sbjct: 49  LAAALAMFKILRSFSSGFTRTARTETDAFCFVALRLYSARRTCNRRNLFARISPLGSPEL 108

Query: 61  SVVPILDQWIEEGRKIKDFELRRIVRDLRSGRRYGQALEVSEWMSSKGLFPLTTRDFAVQ 120
           SVVPILDQWI+EGR IKDFE+RRIVRDLR+ RRYGQAL+VSEWM SKGLF  TTRDFAVQ
Sbjct: 109 SVVPILDQWIQEGRMIKDFEMRRIVRDLRNCRRYGQALQVSEWMRSKGLFSFTTRDFAVQ 168

Query: 121 LDLIGRVRGLDSAEKYFSSVSNQEEIGKLYGALLNCYVREGLVDKSLAHMQEMKQMGFAS 180
           LDLIGRVRG+DSAEKYFSSVSNQEEIGKLYGALLNCYVREGLVDK+L+HMQ+MK+MGFAS
Sbjct: 169 LDLIGRVRGIDSAEKYFSSVSNQEEIGKLYGALLNCYVREGLVDKALSHMQKMKEMGFAS 228

Query: 181 TPLNYNDIMCLYLNTGHVDKVPNVLSEMKENGVLPDNFSYRICINSYGARSDLITMEKVL 240
           +PL YNDIMCLYLNTG VDKVPNVLSEMK+NGVLPDN+SYRICI+SYGARSDLI M KVL
Sbjct: 229 SPLCYNDIMCLYLNTGQVDKVPNVLSEMKDNGVLPDNYSYRICISSYGARSDLIGMLKVL 288

Query: 241 KEMESQSHISMDWTTYSMVANFFIKASMHEEALNYLRKCEDKVDRDALGFNHLISLYTSL 300
           KEMESQ+HISMDWTTYSMVANFFIKA MHE+A++YLRKCEDKV++DALGFNHLISLYTSL
Sbjct: 289 KEMESQTHISMDWTTYSMVANFFIKAGMHEQAMSYLRKCEDKVNQDALGFNHLISLYTSL 348

Query: 301 GHNDEVMRLWALQKEKCKKQVNRDYITMLGSLVKLEQLEEAENLLKEWESSCQCYDFRVP 360
           G  DEVMRLWALQK KCKKQVNRDYITMLG LVKLE LEEAE L++EWESSC+CYDFRVP
Sbjct: 349 GRKDEVMRLWALQK-KCKKQVNRDYITMLGCLVKLEFLEEAEKLVEEWESSCECYDFRVP 408

Query: 361 NVLLIGYSQKGLIERAEKMLRSIAREGRIPPPNSWAIIAAGYLEKQNLEKAFKCMNEALA 420
           NVLLIGYSQ+GLIERAEKML++I  +GRIPPPNSW IIAAGYLEKQN E+AFKCM EA+A
Sbjct: 409 NVLLIGYSQRGLIERAEKMLQNIISDGRIPPPNSWGIIAAGYLEKQNPERAFKCMKEAVA 468

Query: 421 LKEQNNGWRPKPSVVSSILRWLSENGRYGELKEFLSSLKTVPSMDGKLHNALDELVETLE 480
           ++EQN GWRPKPSV+SSILRWLSENGRY ELKEFLSSLK VPSMDGKL NA DEL+ETL+
Sbjct: 469 VQEQNKGWRPKPSVLSSILRWLSENGRYEELKEFLSSLKAVPSMDGKLSNAFDELLETLK 528

Query: 481 ND 482
           N+
Sbjct: 529 NN 529

[Close]

BLAST of MS002724.1 vs. ExPASy Swiss-Prot
Match: Q84JR3 (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21705 PE=2 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 6.0e-120
Identity = 207/439 (47.15%), Postives = 299/439 (68.11%), Query Frame = 0


Query: 34  RLYSTRRNCNRRNLFARISPLGDPELSVVPILDQWIEEGRKIKDFELRRIVRDLRSGRRY 93
           R Y T R   +  L+++ISPLGDP+ SV P L  W++ G+K+   EL RIV DLR  +R+
Sbjct: 15  RYYYTNR-VKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRF 74

Query: 94  GQALEVSEWMSSKGLFPLTTRDFAVQLDLIGRVRGLDSAEKYFSSVSNQEEIGKLYGALL 153
             ALEVS+WM+  G+   +  + AV LDLIGRV G  +AE+YF ++  Q +  K YGALL
Sbjct: 75  LHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALL 134

Query: 154 NCYVREGLVDKSLAHMQEMKQMGFASTPLNYNDIMCLYLNTGHVDKVPNVLSEMKENGVL 213
           NCYVR+  V+KSL H ++MK+MGF ++ L YN+IMCLY N G  +KVP VL EMKE  V 
Sbjct: 135 NCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVA 194

Query: 214 PDNFSYRICINSYGARSDLITMEKVLKEMESQSHISMDWTTYSMVANFFIKASMHEEALN 273
           PDN+SYRICIN++GA  DL  +   L++ME +  I+MDW TY++ A F+I     + A+ 
Sbjct: 195 PDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVE 254

Query: 274 YLRKCEDKVD-RDALGFNHLISLYTSLGHNDEVMRLWALQKEKCKKQVNRDYITMLGSLV 333
            L+  E++++ +D  G+NHLI+LY  LG   EV+RLW L+K+ CK+++N+DY+T+L SLV
Sbjct: 255 LLKMSENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLV 314

Query: 334 KLEQLEEAENLLKEWESSCQCYDFRVPNVLLIGYSQKGLIERAEKMLRSIAREGRIPPPN 393
           K++ L EAE +L EW+SS  CYDFRVPN ++ GY  K + E+AE ML  +AR G+   P 
Sbjct: 315 KIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPE 374

Query: 394 SWAIIAAGYLEKQNLEKAFKCMNEALALKEQNNGWRPKPSVVSSILRWLSENGRYGELKE 453
           SW ++A  Y EK  LE AFKCM  AL ++  +  WRP  ++V+S+L W+ + G   E++ 
Sbjct: 375 SWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVES 434

Query: 454 FLSSLKTVPSMDGKLHNAL 472
           F++SL+    ++ ++++AL
Sbjct: 435 FVASLRNCIGVNKQMYHAL 452

[Close]

BLAST of MS002724.1 vs. ExPASy Swiss-Prot
Match: Q9SKU6 (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 4.5e-75
Identity = 144/410 (35.12%), Postives = 241/410 (58.78%), Query Frame = 0


Query: 50  RISPLGDPELSVVPILDQWIEEGRKIKDFELRRIVRDLRSGRRYGQALEVSEWMSSKGLF 109
           R++  GDP  S++ +LD W+++G  +K  EL  I++ LR   R+  AL++S+WMS   + 
Sbjct: 43  RVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSEHRVH 102

Query: 110 PLTTRDFAVQLDLIGRVRGLDSAEKYFSSVSNQEEIGKLYGALLNCYVREGLVDKSLAHM 169
            ++  D A++LDLI +V GL  AEK+F ++  +     LYGALLNCY  + ++ K+    
Sbjct: 103 EISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVF 162

Query: 170 QEMKQMGFASTPLNYNDIMCLYLNTGHVDKVPNVLSEMKENGVLPDNFSYRICINSYGAR 229
           QEMK++GF    L YN ++ LY+ TG    V  +L EM++  V PD F+    +++Y   
Sbjct: 163 QEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVV 222

Query: 230 SDLITMEKVLKEMESQSHISMDWTTYSMVANFFIKASMHEEALNYLRKCEDKVD--RDAL 289
           SD+  MEK L   E+   + +DW TY+  AN +IKA + E+AL  LRK E  V+  +   
Sbjct: 223 SDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKH 282

Query: 290 GFNHLISLYTSLGHNDEVMRLWALQKEKCKKQVNRDYITMLGSLVKLEQLEEAENLLKEW 349
            +  L+S Y + G  +EV RLW+L KE      N  YI+++ +L+K++ +EE E +++EW
Sbjct: 283 AYEVLMSFYGAAGKKEEVYRLWSLYKE-LDGFYNTGYISVISALLKMDDIEEVEKIMEEW 342

Query: 350 ESSCQCYDFRVPNVLLIGYSQKGLIERAEKMLRSIAREGRIPPPNSWAIIAAGYLEKQNL 409
           E+    +D R+P++L+ GY +KG++E+AE+++  + ++ R+   ++W  +A GY     +
Sbjct: 343 EAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKM 402

Query: 410 EKAFKCMNEALALKEQNNGWRPKPSVVSSILRWLSENGRYGELKEFLSSL 458
           EKA +    A+ + +   GWRP   V+ S + +L        L++ L  L
Sbjct: 403 EKAVEKWKRAIEVSKP--GWRPHQVVLMSCVDYLEGQRDMEGLRKILRLL 449

[Close]

BLAST of MS002724.1 vs. ExPASy Swiss-Prot
Match: Q8LPS6 (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 274.6 bits (701), Expect = 2.1e-72
Identity = 148/432 (34.26%), Postives = 249/432 (57.64%), Query Frame = 0


Query: 47  LFARISPLGDPELSVVPILDQWIEEGRKIKDFELRRIVRDLRSGRRYGQALEVSEWMSSK 106
           ++ +IS +  PEL    +L+QW + GRK+  +EL R+V++LR  +R  QALEV +WM+++
Sbjct: 69  IYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNR 128

Query: 107 G-LFPLTTRDFAVQLDLIGRVRGLDSAEKYFSSVSNQEEIGKLYGALLNCYVREGLVDKS 166
           G  F L+  D A+QLDLIG+VRG+  AE++F  +    +  ++YG+LLN YVR    +K+
Sbjct: 129 GERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKA 188

Query: 167 LAHMQEMKQMGFASTPLNYNDIMCLYLNTGHVDKVPNVLSEMKENGVLPDNFSYRICINS 226
            A +  M+  G+A  PL +N +M LY+N    DKV  ++ EMK+  +  D +SY I ++S
Sbjct: 189 EALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSS 248

Query: 227 YGARSDLITMEKVLKEMESQSHISMDWTTYSMVANFFIKASMHEEALNYLRKCEDKV-DR 286
            G+   +  ME V ++M+S   I  +WTT+S +A  +IK    E+A + LRK E ++  R
Sbjct: 249 CGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGR 308

Query: 287 DALGFNHLISLYTSLGHNDEVMRLWALQKEKCKKQVNRDYITMLGSLVKLEQLEEAENLL 346
           + + +++L+SLY SLG+  E+ R+W + K       N  Y  ++ SLV++  +E AE + 
Sbjct: 309 NRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVY 368

Query: 347 KEWESSCQCYDFRVPNVLLIGYSQKGLIERAEKMLRSIAREGRIPPPNSWAIIAAGYLEK 406
           +EW      YD R+PN+L+  Y +   +E AE +   +   G  P  ++W I+A G+  K
Sbjct: 369 EEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRK 428

Query: 407 QNLEKAFKCMNEALALKEQNNGWRPKPSVVSSILRWLSENGRYGELKEFLSSLKTVPSMD 466
           + + +A  C+  A + +  +N WRPK  ++S   +   E       +  L  L+    ++
Sbjct: 429 RCISEALTCLRNAFSAEGSSN-WRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLE 488

Query: 467 GKLHNALDELVE 477
            K + AL ++ E
Sbjct: 489 DKSYLALIDVDE 499

[Close]

BLAST of MS002724.1 vs. ExPASy Swiss-Prot
Match: O22714 (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=1 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 4.5e-67
Identity = 134/438 (30.59%), Postives = 241/438 (55.02%), Query Frame = 0


Query: 31  LVLRLYSTRRNCNRRN--------LFARISPLGDPELSVVPILDQWIEEGRKIKDFELRR 90
           + +R  S  R+  +R+        L+ R+   G  E+ V   L+Q+++  + +  +E+  
Sbjct: 1   MAMRHLSRSRDVTKRSTKKYIEEPLYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGD 60

Query: 91  IVRDLRSGRRYGQALEVSEWMSSKGLFPLTTRDFAVQLDLIGRVRGLDSAEKYFSSVSNQ 150
            ++ LR+   Y  AL++SE M  +G+   T  D A+ LDL+ + R + + E YF  +   
Sbjct: 61  TIKKLRNRGLYYPALKLSEVMEERGM-NKTVSDQAIHLDLVAKAREITAGENYFVDLPET 120

Query: 151 EEIGKLYGALLNCYVREGLVDKSLAHMQEMKQMGFASTPLNYNDIMCLYLNTGHVDKVPN 210
            +    YG+LLNCY +E L +K+   + +MK++    + ++YN +M LY  TG  +KVP 
Sbjct: 121 SKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPA 180

Query: 211 VLSEMKENGVLPDNFSYRICINSYGARSDLITMEKVLKEMESQSHISMDWTTYSMVANFF 270
           ++ E+K   V+PD+++Y + + +  A +D+  +E+V++EM     ++ DWTTYS +A+ +
Sbjct: 181 MIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIY 240

Query: 271 IKASMHEEALNYLRKCEDK-VDRDALGFNHLISLYTSLGHNDEVMRLWALQKEKCKKQVN 330
           + A + ++A   L++ E K   RD   +  LI+LY  LG   EV R+W   +    K  N
Sbjct: 241 VDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSN 300

Query: 331 RDYITMLGSLVKLEQLEEAENLLKEWESSCQCYDFRVPNVLLIGYSQKGLIERAEKMLRS 390
             Y+ M+  LVKL  L  AE L KEW+++C  YD R+ NVL+  Y+Q+GLI++A ++   
Sbjct: 301 VAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEK 360

Query: 391 IAREGRIPPPNSWAIIAAGYLEKQNLEKAFKCMNEALALKEQNNG-WRPKPSVVSSILRW 450
             R G      +W I    Y++  ++ +A +CM++A+++ + + G W P P  V +++ +
Sbjct: 361 APRRGGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSY 420

Query: 451 LSENGRYGELKEFLSSLK 459
             +       +  L  LK
Sbjct: 421 FEQKKDVNGAENLLEILK 437

[Close]

BLAST of MS002724.1 vs. ExPASy Swiss-Prot
Match: Q9SY07 (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.5e-62
Identity = 135/429 (31.47%), Postives = 234/429 (54.55%), Query Frame = 0


Query: 44  RRNLFARISPLGDPELSVVPILDQWIEEGRKIKDFELRRIVRDLRSGRRYGQALEVSEWM 103
           R  L  R+  L   + S V  + +W EEG  ++ +EL RIVR+LR  +RY  ALE+ EWM
Sbjct: 60  RDTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWM 119

Query: 104 SSKGLFPLTTRDFAVQLDLIGRVRGLDSAEKYFSSVSNQEEIGKLYGALLNCYVREGLVD 163
             +    L   D+AV LDLI ++RGL+SAEK+F  + +Q        +LL+ YV+  L D
Sbjct: 120 VVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSD 179

Query: 164 KSLAHMQEMKQMGFASTPLNYNDIMCLYLNTGHVDKVPNVLSEMKENGVLPDNFSYRICI 223
           K+ A  ++M + GF  + L YN ++ +Y++ G  +KVP ++ E+K     PD  +Y + +
Sbjct: 180 KAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIR-TSPDIVTYNLWL 239

Query: 224 NSYGARSDLITMEKVLKEMESQSHISMDWTTYSMVANFFIKASMHEEALNYLRKCEDKVD 283
            ++ + +D+   EKV  + + +  ++ DW TYS++ N + K    E+A   L++ E  V 
Sbjct: 240 TAFASGNDVEGAEKVYLKAKEEK-LNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVS 299

Query: 284 -RDALGFNHLISLYTSLGHNDEVMRLWALQKEKCKKQVNRDYITMLGSLVKLEQLEEAEN 343
            ++ + +  LISL+ +LG  D V   W   K   KK  + +Y++M+ ++VKL + E+A+ 
Sbjct: 300 KKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKG 359

Query: 344 LLKEWESSCQCYDFRVPNVLLIGYSQKGLIERAEKMLRSIAREGRIPPPNSWAIIAAGYL 403
           L  EWES     D R+PN++L  Y  +  +   EK    I  +G  P  ++W I+   YL
Sbjct: 360 LYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYL 419

Query: 404 EKQNLEKAFKCMNEALALKEQNNGWRPKPSVVSSILRWLSENGRYGELKEFLSSLKTVPS 463
           +++++EK   C  +A+   +    W     +V    + L E G     ++ ++ L+    
Sbjct: 420 KRKDMEKVLDCFGKAI---DSVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGY 479

Query: 464 MDGKLHNAL 472
           ++ +L+N+L
Sbjct: 480 VNTQLYNSL 483

[Close]

BLAST of MS002724.1 vs. ExPASy TrEMBL
Match: A0A6J1CNQ2 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111012782 PE=4 SV=1)

HSP 1 Score: 955.7 bits (2469), Expect = 7.5e-275
Identity = 475/481 (98.75%), Postives = 477/481 (99.17%), Query Frame = 0


Query: 1   MAAALAMFKILSRSSNFARTVRTETDSFCSLVLRLYSTRRNCNRRNLFARISPLGDPELS 60
           MAAALAMFKILSRSSNF RTVRTETDSFCSLVLRLYSTRRNCNRRNLFARISPLGDPELS
Sbjct: 1   MAAALAMFKILSRSSNFERTVRTETDSFCSLVLRLYSTRRNCNRRNLFARISPLGDPELS 60

Query: 61  VVPILDQWIEEGRKIKDFELRRIVRDLRSGRRYGQALEVSEWMSSKGLFPLTTRDFAVQL 120
           VV ILDQWIEEGRKIKDFELRRIVRDLRS RRYGQALEVSEWMSSKGLFPLTTRDFAVQL
Sbjct: 61  VVQILDQWIEEGRKIKDFELRRIVRDLRSCRRYGQALEVSEWMSSKGLFPLTTRDFAVQL 120

Query: 121 DLIGRVRGLDSAEKYFSSVSNQEEIGKLYGALLNCYVREGLVDKSLAHMQEMKQMGFAST 180
           DLIGRVRGLDSAEKYFSSVSNQEEIGKLYGALLNCYVREGLVDKSL HMQEMKQMGFAST
Sbjct: 121 DLIGRVRGLDSAEKYFSSVSNQEEIGKLYGALLNCYVREGLVDKSLTHMQEMKQMGFAST 180

Query: 181 PLNYNDIMCLYLNTGHVDKVPNVLSEMKENGVLPDNFSYRICINSYGARSDLITMEKVLK 240
           PLNYNDIMCLYLNTGHVDKVPNVLSEMKENGVLPDNFSYRICINSYGARSDLITMEKVLK
Sbjct: 181 PLNYNDIMCLYLNTGHVDKVPNVLSEMKENGVLPDNFSYRICINSYGARSDLITMEKVLK 240

Query: 241 EMESQSHISMDWTTYSMVANFFIKASMHEEALNYLRKCEDKVDRDALGFNHLISLYTSLG 300
           EMESQSHISMDWTTYSMVANFFIKASMHEEALNYLRKCEDKVDRDALGFNHLISLYTSLG
Sbjct: 241 EMESQSHISMDWTTYSMVANFFIKASMHEEALNYLRKCEDKVDRDALGFNHLISLYTSLG 300

Query: 301 HNDEVMRLWALQKEKCKKQVNRDYITMLGSLVKLEQLEEAENLLKEWESSCQCYDFRVPN 360
           HNDEVMRLWALQKEKCKKQVNRDYITMLGSLVKLE+LEEAENLLKEWESSCQCYDFRVPN
Sbjct: 301 HNDEVMRLWALQKEKCKKQVNRDYITMLGSLVKLERLEEAENLLKEWESSCQCYDFRVPN 360

Query: 361 VLLIGYSQKGLIERAEKMLRSIAREGRIPPPNSWAIIAAGYLEKQNLEKAFKCMNEALAL 420
           VLLIGYSQKGLIERAEKMLRSIAREGRIPPPNSWAIIAAGYLEKQNLEKAFKCMNEALA+
Sbjct: 361 VLLIGYSQKGLIERAEKMLRSIAREGRIPPPNSWAIIAAGYLEKQNLEKAFKCMNEALAV 420

Query: 421 KEQNNGWRPKPSVVSSILRWLSENGRYGELKEFLSSLKTVPSMDGKLHNALDELVETLEN 480
           KEQNNGWRPKPSVVSSILRWLSENGRYGELKEFLSSLKTVPSMDGKLHNALDELVETLEN
Sbjct: 421 KEQNNGWRPKPSVVSSILRWLSENGRYGELKEFLSSLKTVPSMDGKLHNALDELVETLEN 480

Query: 481 D 482
           D
Sbjct: 481 D 481

[Close]

BLAST of MS002724.1 vs. ExPASy TrEMBL
Match: A0A6J1JQ72 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111486809 PE=4 SV=1)

HSP 1 Score: 831.6 bits (2147), Expect = 1.6e-237
Identity = 413/482 (85.68%), Postives = 447/482 (92.74%), Query Frame = 0


Query: 1   MAAALAMFKIL-SRSSNFARTVRTETDSFCSLVLRLYSTRRNCNRRNLFARISPLGDPEL 60
           +AAALAMFKIL S SS F RT RTETD+FC + LRLYS RR CNRRNLFARISPLG PEL
Sbjct: 45  LAAALAMFKILRSFSSGFTRTARTETDAFCFVALRLYSARRTCNRRNLFARISPLGSPEL 104

Query: 61  SVVPILDQWIEEGRKIKDFELRRIVRDLRSGRRYGQALEVSEWMSSKGLFPLTTRDFAVQ 120
           SVVPILDQWI+EGR IKDFELRRIVRDLR+ RRYGQALEVSEWM SKGLF  TTRDFAVQ
Sbjct: 105 SVVPILDQWIQEGRMIKDFELRRIVRDLRNCRRYGQALEVSEWMRSKGLFSFTTRDFAVQ 164

Query: 121 LDLIGRVRGLDSAEKYFSSVSNQEEIGKLYGALLNCYVREGLVDKSLAHMQEMKQMGFAS 180
           LDLIGRV+GLDSAEKYFSSVSNQEE+GKLYGALLNCYVREGLVDK+L+HMQ+MK+MGFAS
Sbjct: 165 LDLIGRVQGLDSAEKYFSSVSNQEEMGKLYGALLNCYVREGLVDKALSHMQKMKEMGFAS 224

Query: 181 TPLNYNDIMCLYLNTGHVDKVPNVLSEMKENGVLPDNFSYRICINSYGARSDLITMEKVL 240
           +PL YNDIMCLYLNTG VDKVPNVLSEMKENGVLPDN+SYRICI+SYGARSDLI M KVL
Sbjct: 225 SPLCYNDIMCLYLNTGQVDKVPNVLSEMKENGVLPDNYSYRICISSYGARSDLIGMLKVL 284

Query: 241 KEMESQSHISMDWTTYSMVANFFIKASMHEEALNYLRKCEDKVDRDALGFNHLISLYTSL 300
           KEMESQ+HISMDWTTYSMVANFFIKA MHE+A++YLRKCEDKV++DALGFNHLISLYTSL
Sbjct: 285 KEMESQTHISMDWTTYSMVANFFIKAGMHEKAMSYLRKCEDKVNQDALGFNHLISLYTSL 344

Query: 301 GHNDEVMRLWALQKEKCKKQVNRDYITMLGSLVKLEQLEEAENLLKEWESSCQCYDFRVP 360
           G  DEVMRLWALQK KCKKQVNRDYITMLG LVKLE LEEAE L+KEW SSC+CYDFRVP
Sbjct: 345 GCKDEVMRLWALQK-KCKKQVNRDYITMLGCLVKLEFLEEAEKLVKEWVSSCECYDFRVP 404

Query: 361 NVLLIGYSQKGLIERAEKMLRSIAREGRIPPPNSWAIIAAGYLEKQNLEKAFKCMNEALA 420
           NVLLIGYS++GLIERAEKML++I  +GRIPPPNSW IIAAGYLEKQNLEKAFKCM EA+A
Sbjct: 405 NVLLIGYSKRGLIERAEKMLQNIISDGRIPPPNSWGIIAAGYLEKQNLEKAFKCMKEAVA 464

Query: 421 LKEQNNGWRPKPSVVSSILRWLSENGRYGELKEFLSSLKTVPSMDGKLHNALDELVETLE 480
           ++EQN GWRPKPSV+SSILRWLSENGRY ELKEFLSSLKTVPSMDGKL NA DEL+ETL+
Sbjct: 465 VQEQNKGWRPKPSVLSSILRWLSENGRYEELKEFLSSLKTVPSMDGKLSNAFDELLETLK 524

Query: 481 ND 482
           N+
Sbjct: 525 NN 525

[Close]

BLAST of MS002724.1 vs. ExPASy TrEMBL
Match: A0A6J1FVG8 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111447235 PE=4 SV=1)

HSP 1 Score: 828.9 bits (2140), Expect = 1.1e-236
Identity = 409/482 (84.85%), Postives = 446/482 (92.53%), Query Frame = 0


Query: 1   MAAALAMFKIL-SRSSNFARTVRTETDSFCSLVLRLYSTRRNCNRRNLFARISPLGDPEL 60
           +AAALAMFKIL S SS F RT RTETD+FC + LRLYS RR CNRRNLFARISPLG PEL
Sbjct: 49  LAAALAMFKILRSFSSGFTRTARTETDAFCFVALRLYSARRTCNRRNLFARISPLGSPEL 108

Query: 61  SVVPILDQWIEEGRKIKDFELRRIVRDLRSGRRYGQALEVSEWMSSKGLFPLTTRDFAVQ 120
           SVVPILDQWI+EGR IKDFE+RRIVRDLR+ RRYGQAL+VSEWM SKGLF  TTRDFAVQ
Sbjct: 109 SVVPILDQWIQEGRMIKDFEMRRIVRDLRNCRRYGQALQVSEWMRSKGLFSFTTRDFAVQ 168

Query: 121 LDLIGRVRGLDSAEKYFSSVSNQEEIGKLYGALLNCYVREGLVDKSLAHMQEMKQMGFAS 180
           LDLIGRVRG+DSAEKYFSSVSNQEEIGKLYGALLNCYVREGLVDK+L+HMQ+MK+MGFAS
Sbjct: 169 LDLIGRVRGIDSAEKYFSSVSNQEEIGKLYGALLNCYVREGLVDKALSHMQKMKEMGFAS 228

Query: 181 TPLNYNDIMCLYLNTGHVDKVPNVLSEMKENGVLPDNFSYRICINSYGARSDLITMEKVL 240
           +PL YNDIMCLYLNTG VDKVPNVLSEMK+NGVLPDN+SYRICI+SYGARSDLI M KVL
Sbjct: 229 SPLCYNDIMCLYLNTGQVDKVPNVLSEMKDNGVLPDNYSYRICISSYGARSDLIGMLKVL 288

Query: 241 KEMESQSHISMDWTTYSMVANFFIKASMHEEALNYLRKCEDKVDRDALGFNHLISLYTSL 300
           KEMESQ+HISMDWTTYSMVANFFIKA MHE+A++YLRKCEDKV++DALGFNHLISLYTSL
Sbjct: 289 KEMESQTHISMDWTTYSMVANFFIKAGMHEQAMSYLRKCEDKVNQDALGFNHLISLYTSL 348

Query: 301 GHNDEVMRLWALQKEKCKKQVNRDYITMLGSLVKLEQLEEAENLLKEWESSCQCYDFRVP 360
           G  DEVMRLWALQK KCKKQVNRDYITMLG LVKLE LEEAE L++EWESSC+CYDFRVP
Sbjct: 349 GRKDEVMRLWALQK-KCKKQVNRDYITMLGCLVKLEFLEEAEKLVEEWESSCECYDFRVP 408

Query: 361 NVLLIGYSQKGLIERAEKMLRSIAREGRIPPPNSWAIIAAGYLEKQNLEKAFKCMNEALA 420
           NVLLIGYSQ+GLIERAEKML++I  +GRIPPPNSW IIAAGYLEKQN E+AFKCM EA+A
Sbjct: 409 NVLLIGYSQRGLIERAEKMLQNIISDGRIPPPNSWGIIAAGYLEKQNPERAFKCMKEAVA 468

Query: 421 LKEQNNGWRPKPSVVSSILRWLSENGRYGELKEFLSSLKTVPSMDGKLHNALDELVETLE 480
           ++EQN GWRPKPSV+SSILRWLSENGRY ELKEFLSSLK VPSMDGKL NA DEL+ETL+
Sbjct: 469 VQEQNKGWRPKPSVLSSILRWLSENGRYEELKEFLSSLKAVPSMDGKLSNAFDELLETLK 528

Query: 481 ND 482
           N+
Sbjct: 529 NN 529

[Close]

BLAST of MS002724.1 vs. ExPASy TrEMBL
Match: A0A0A0L7Y2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G104890 PE=4 SV=1)

HSP 1 Score: 798.1 bits (2060), Expect = 2.0e-227
Identity = 395/482 (81.95%), Postives = 437/482 (90.66%), Query Frame = 0


Query: 1   MAAALAMFKILSRSSN-FARTVRTETDSFCSLVLRLYSTRRNCNRRNLFARISPLGDPEL 60
           MAAA AMFKILSRSS+   RT+R ETD+FC + LRLYSTRR+C+RRNL+ARISPLGDPE 
Sbjct: 1   MAAASAMFKILSRSSSGCTRTLRPETDAFCFVALRLYSTRRSCDRRNLYARISPLGDPEC 60

Query: 61  SVVPILDQWIEEGRKIKDFELRRIVRDLRSGRRYGQALEVSEWMSSKGLFPLTTRDFAVQ 120
           +VVP+L+QWIEEGR IKDFELRRIVRDLR+ RRY QALEVSEWM SKGLF LTTRDFA+Q
Sbjct: 61  TVVPVLNQWIEEGRNIKDFELRRIVRDLRTCRRYRQALEVSEWMCSKGLFSLTTRDFAIQ 120

Query: 121 LDLIGRVRGLDSAEKYFSSVSNQEEIGKLYGALLNCYVREGLVDKSLAHMQEMKQMGFAS 180
           LDLIG+VRGLDSAEKYF SVSNQ+EIGKLYGALLNCYVREGL+DKSLAHMQ+MK+MG AS
Sbjct: 121 LDLIGQVRGLDSAEKYFGSVSNQKEIGKLYGALLNCYVREGLIDKSLAHMQKMKEMGLAS 180

Query: 181 TPLNYNDIMCLYLNTGHVDKVPNVLSEMKENGVLPDNFSYRICINSYGARSDLITMEKVL 240
           +PL YNDIMCLYLNTG  DKVPNVLSEMKENGVLPDNFSYRICI+SYGARSD+I+ME VL
Sbjct: 181 SPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICISSYGARSDVISMENVL 240

Query: 241 KEMESQSHISMDWTTYSMVANFFIKASMHEEALNYLRKCEDKVDRDALGFNHLISLYTSL 300
           KEME Q+HISMDWTTYSMVA FFIKA MH++A+NYLRKCEDKVD DALGFNHLIS YT+L
Sbjct: 241 KEMEGQTHISMDWTTYSMVAGFFIKAGMHDKAMNYLRKCEDKVDEDALGFNHLISHYTNL 300

Query: 301 GHNDEVMRLWALQKEKCKKQVNRDYITMLGSLVKLEQLEEAENLLKEWESSCQCYDFRVP 360
           GH +EVMRLWAL K K KKQ+NRDYITMLGSLVKLE LEEAENL+ EWESSCQCYDFRVP
Sbjct: 301 GHKNEVMRLWALLK-KGKKQLNRDYITMLGSLVKLELLEEAENLVMEWESSCQCYDFRVP 360

Query: 361 NVLLIGYSQKGLIERAEKMLRSIAREGRIPPPNSWAIIAAGYLEKQNLEKAFKCMNEALA 420
           NV+LIGYSQKGLIE+AEKMLR+I   G IP PNSW IIA+GYLEKQNLEKAF+CM EALA
Sbjct: 361 NVVLIGYSQKGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLEKQNLEKAFECMKEALA 420

Query: 421 LKEQNNGWRPKPSVVSSILRWLSENGRYGELKEFLSSLKTVPSMDGKLHNALDELVETLE 480
           +K QN  WRPKP+V+SSILRWLSEN RY E+KEF+SSLKTVPSMD KL+NALDEL+E + 
Sbjct: 421 VKGQNKVWRPKPNVLSSILRWLSENRRYEEMKEFMSSLKTVPSMDEKLNNALDELLEIMA 480

Query: 481 ND 482
           ND
Sbjct: 481 ND 481

[Close]

BLAST of MS002724.1 vs. ExPASy TrEMBL
Match: A0A1S4DZ16 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103493335 PE=4 SV=1)

HSP 1 Score: 783.1 bits (2021), Expect = 6.7e-223
Identity = 388/482 (80.50%), Postives = 433/482 (89.83%), Query Frame = 0


Query: 1   MAAALAMFKILSRSSN-FARTVRTETDSFCSLVLRLYSTRRNCNRRNLFARISPLGDPEL 60
           MAAA AMFKILSRSS+   RT R ETD+FC + LRLYSTRR+CNRR L+A ISPLGDP+ 
Sbjct: 1   MAAASAMFKILSRSSSGCTRTPRPETDAFCFVALRLYSTRRSCNRRKLYAMISPLGDPDS 60

Query: 61  SVVPILDQWIEEGRKIKDFELRRIVRDLRSGRRYGQALEVSEWMSSKGLFPLTTRDFAVQ 120
           SVVP+L+QWI+EGRKIKDFELRRIVRDLR+ RRY QALEVSEWM SKG F LTTRDFA+Q
Sbjct: 61  SVVPVLNQWIKEGRKIKDFELRRIVRDLRTCRRYRQALEVSEWMCSKGRFSLTTRDFAIQ 120

Query: 121 LDLIGRVRGLDSAEKYFSSVSNQEEIGKLYGALLNCYVREGLVDKSLAHMQEMKQMGFAS 180
           LDLIG+VRGLDSAEKYF SVS Q+EIGKLYG+LLNCYVREGL+DKSLAHMQ+MK+MGFAS
Sbjct: 121 LDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGSLLNCYVREGLIDKSLAHMQKMKEMGFAS 180

Query: 181 TPLNYNDIMCLYLNTGHVDKVPNVLSEMKENGVLPDNFSYRICINSYGARSDLITMEKVL 240
           +PL YNDIMCLYLNTG  DKVPNVLSEMKENGVLPDNFSYRICI+SYGARSD+I+ME VL
Sbjct: 181 SPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICISSYGARSDVISMENVL 240

Query: 241 KEMESQSHISMDWTTYSMVANFFIKASMHEEALNYLRKCEDKVDRDALGFNHLISLYTSL 300
           KEMESQ+HISMDW TYSMVA FFIK  MH++A NYLRKCED+VD+DALGFNHLIS YT+L
Sbjct: 241 KEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRVDQDALGFNHLISHYTNL 300

Query: 301 GHNDEVMRLWALQKEKCKKQVNRDYITMLGSLVKLEQLEEAENLLKEWESSCQCYDFRVP 360
           GH +EVMRLWALQK K KKQ+NRDYITMLGSLVKL+ LEEAENL+ EWESSCQC DFRVP
Sbjct: 301 GHKNEVMRLWALQK-KAKKQLNRDYITMLGSLVKLDLLEEAENLVMEWESSCQCNDFRVP 360

Query: 361 NVLLIGYSQKGLIERAEKMLRSIAREGRIPPPNSWAIIAAGYLEKQNLEKAFKCMNEALA 420
           NV+LIGYSQ GLIE+AEKMLR+I   G IP PNSW IIA+GYLEKQNLEKAF+CM EALA
Sbjct: 361 NVVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLEKQNLEKAFECMKEALA 420

Query: 421 LKEQNNGWRPKPSVVSSILRWLSENGRYGELKEFLSSLKTVPSMDGKLHNALDELVETLE 480
           +K QN  WRPKP+V+SSILRWLSEN RY E+KEF+SSLKTVPSMD KL++ALDEL+E +E
Sbjct: 421 VKGQNKVWRPKPNVLSSILRWLSENRRYEEMKEFMSSLKTVPSMDEKLNSALDELLEIME 480

Query: 481 ND 482
           ND
Sbjct: 481 ND 481

[Close]

BLAST of MS002724.1 vs. TAIR 10
Match: AT4G21705.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 432.6 bits (1111), Expect = 4.2e-121
Identity = 207/439 (47.15%), Postives = 299/439 (68.11%), Query Frame = 0


Query: 34  RLYSTRRNCNRRNLFARISPLGDPELSVVPILDQWIEEGRKIKDFELRRIVRDLRSGRRY 93
           R Y T R   +  L+++ISPLGDP+ SV P L  W++ G+K+   EL RIV DLR  +R+
Sbjct: 15  RYYYTNR-VKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRF 74

Query: 94  GQALEVSEWMSSKGLFPLTTRDFAVQLDLIGRVRGLDSAEKYFSSVSNQEEIGKLYGALL 153
             ALEVS+WM+  G+   +  + AV LDLIGRV G  +AE+YF ++  Q +  K YGALL
Sbjct: 75  LHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALL 134

Query: 154 NCYVREGLVDKSLAHMQEMKQMGFASTPLNYNDIMCLYLNTGHVDKVPNVLSEMKENGVL 213
           NCYVR+  V+KSL H ++MK+MGF ++ L YN+IMCLY N G  +KVP VL EMKE  V 
Sbjct: 135 NCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVA 194

Query: 214 PDNFSYRICINSYGARSDLITMEKVLKEMESQSHISMDWTTYSMVANFFIKASMHEEALN 273
           PDN+SYRICIN++GA  DL  +   L++ME +  I+MDW TY++ A F+I     + A+ 
Sbjct: 195 PDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVE 254

Query: 274 YLRKCEDKVD-RDALGFNHLISLYTSLGHNDEVMRLWALQKEKCKKQVNRDYITMLGSLV 333
            L+  E++++ +D  G+NHLI+LY  LG   EV+RLW L+K+ CK+++N+DY+T+L SLV
Sbjct: 255 LLKMSENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLV 314

Query: 334 KLEQLEEAENLLKEWESSCQCYDFRVPNVLLIGYSQKGLIERAEKMLRSIAREGRIPPPN 393
           K++ L EAE +L EW+SS  CYDFRVPN ++ GY  K + E+AE ML  +AR G+   P 
Sbjct: 315 KIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPE 374

Query: 394 SWAIIAAGYLEKQNLEKAFKCMNEALALKEQNNGWRPKPSVVSSILRWLSENGRYGELKE 453
           SW ++A  Y EK  LE AFKCM  AL ++  +  WRP  ++V+S+L W+ + G   E++ 
Sbjct: 375 SWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVES 434

Query: 454 FLSSLKTVPSMDGKLHNAL 472
           F++SL+    ++ ++++AL
Sbjct: 435 FVASLRNCIGVNKQMYHAL 452

[Close]

BLAST of MS002724.1 vs. TAIR 10
Match: AT2G20710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 283.5 bits (724), Expect = 3.2e-76
Identity = 144/410 (35.12%), Postives = 241/410 (58.78%), Query Frame = 0


Query: 50  RISPLGDPELSVVPILDQWIEEGRKIKDFELRRIVRDLRSGRRYGQALEVSEWMSSKGLF 109
           R++  GDP  S++ +LD W+++G  +K  EL  I++ LR   R+  AL++S+WMS   + 
Sbjct: 43  RVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSEHRVH 102

Query: 110 PLTTRDFAVQLDLIGRVRGLDSAEKYFSSVSNQEEIGKLYGALLNCYVREGLVDKSLAHM 169
            ++  D A++LDLI +V GL  AEK+F ++  +     LYGALLNCY  + ++ K+    
Sbjct: 103 EISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVF 162

Query: 170 QEMKQMGFASTPLNYNDIMCLYLNTGHVDKVPNVLSEMKENGVLPDNFSYRICINSYGAR 229
           QEMK++GF    L YN ++ LY+ TG    V  +L EM++  V PD F+    +++Y   
Sbjct: 163 QEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVV 222

Query: 230 SDLITMEKVLKEMESQSHISMDWTTYSMVANFFIKASMHEEALNYLRKCEDKVD--RDAL 289
           SD+  MEK L   E+   + +DW TY+  AN +IKA + E+AL  LRK E  V+  +   
Sbjct: 223 SDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKH 282

Query: 290 GFNHLISLYTSLGHNDEVMRLWALQKEKCKKQVNRDYITMLGSLVKLEQLEEAENLLKEW 349
            +  L+S Y + G  +EV RLW+L KE      N  YI+++ +L+K++ +EE E +++EW
Sbjct: 283 AYEVLMSFYGAAGKKEEVYRLWSLYKE-LDGFYNTGYISVISALLKMDDIEEVEKIMEEW 342

Query: 350 ESSCQCYDFRVPNVLLIGYSQKGLIERAEKMLRSIAREGRIPPPNSWAIIAAGYLEKQNL 409
           E+    +D R+P++L+ GY +KG++E+AE+++  + ++ R+   ++W  +A GY     +
Sbjct: 343 EAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKM 402

Query: 410 EKAFKCMNEALALKEQNNGWRPKPSVVSSILRWLSENGRYGELKEFLSSL 458
           EKA +    A+ + +   GWRP   V+ S + +L        L++ L  L
Sbjct: 403 EKAVEKWKRAIEVSKP--GWRPHQVVLMSCVDYLEGQRDMEGLRKILRLL 449

[Close]

BLAST of MS002724.1 vs. TAIR 10
Match: AT1G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 274.6 bits (701), Expect = 1.5e-73
Identity = 148/432 (34.26%), Postives = 249/432 (57.64%), Query Frame = 0


Query: 47  LFARISPLGDPELSVVPILDQWIEEGRKIKDFELRRIVRDLRSGRRYGQALEVSEWMSSK 106
           ++ +IS +  PEL    +L+QW + GRK+  +EL R+V++LR  +R  QALEV +WM+++
Sbjct: 69  IYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNR 128

Query: 107 G-LFPLTTRDFAVQLDLIGRVRGLDSAEKYFSSVSNQEEIGKLYGALLNCYVREGLVDKS 166
           G  F L+  D A+QLDLIG+VRG+  AE++F  +    +  ++YG+LLN YVR    +K+
Sbjct: 129 GERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKA 188

Query: 167 LAHMQEMKQMGFASTPLNYNDIMCLYLNTGHVDKVPNVLSEMKENGVLPDNFSYRICINS 226
            A +  M+  G+A  PL +N +M LY+N    DKV  ++ EMK+  +  D +SY I ++S
Sbjct: 189 EALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSS 248

Query: 227 YGARSDLITMEKVLKEMESQSHISMDWTTYSMVANFFIKASMHEEALNYLRKCEDKV-DR 286
            G+   +  ME V ++M+S   I  +WTT+S +A  +IK    E+A + LRK E ++  R
Sbjct: 249 CGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGR 308

Query: 287 DALGFNHLISLYTSLGHNDEVMRLWALQKEKCKKQVNRDYITMLGSLVKLEQLEEAENLL 346
           + + +++L+SLY SLG+  E+ R+W + K       N  Y  ++ SLV++  +E AE + 
Sbjct: 309 NRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVY 368

Query: 347 KEWESSCQCYDFRVPNVLLIGYSQKGLIERAEKMLRSIAREGRIPPPNSWAIIAAGYLEK 406
           +EW      YD R+PN+L+  Y +   +E AE +   +   G  P  ++W I+A G+  K
Sbjct: 369 EEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRK 428

Query: 407 QNLEKAFKCMNEALALKEQNNGWRPKPSVVSSILRWLSENGRYGELKEFLSSLKTVPSMD 466
           + + +A  C+  A + +  +N WRPK  ++S   +   E       +  L  L+    ++
Sbjct: 429 RCISEALTCLRNAFSAEGSSN-WRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLE 488

Query: 467 GKLHNALDELVE 477
            K + AL ++ E
Sbjct: 489 DKSYLALIDVDE 499

[Close]

BLAST of MS002724.1 vs. TAIR 10
Match: AT1G60770.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 256.9 bits (655), Expect = 3.2e-68
Identity = 134/438 (30.59%), Postives = 241/438 (55.02%), Query Frame = 0


Query: 31  LVLRLYSTRRNCNRRN--------LFARISPLGDPELSVVPILDQWIEEGRKIKDFELRR 90
           + +R  S  R+  +R+        L+ R+   G  E+ V   L+Q+++  + +  +E+  
Sbjct: 1   MAMRHLSRSRDVTKRSTKKYIEEPLYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGD 60

Query: 91  IVRDLRSGRRYGQALEVSEWMSSKGLFPLTTRDFAVQLDLIGRVRGLDSAEKYFSSVSNQ 150
            ++ LR+   Y  AL++SE M  +G+   T  D A+ LDL+ + R + + E YF  +   
Sbjct: 61  TIKKLRNRGLYYPALKLSEVMEERGM-NKTVSDQAIHLDLVAKAREITAGENYFVDLPET 120

Query: 151 EEIGKLYGALLNCYVREGLVDKSLAHMQEMKQMGFASTPLNYNDIMCLYLNTGHVDKVPN 210
            +    YG+LLNCY +E L +K+   + +MK++    + ++YN +M LY  TG  +KVP 
Sbjct: 121 SKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPA 180

Query: 211 VLSEMKENGVLPDNFSYRICINSYGARSDLITMEKVLKEMESQSHISMDWTTYSMVANFF 270
           ++ E+K   V+PD+++Y + + +  A +D+  +E+V++EM     ++ DWTTYS +A+ +
Sbjct: 181 MIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIY 240

Query: 271 IKASMHEEALNYLRKCEDK-VDRDALGFNHLISLYTSLGHNDEVMRLWALQKEKCKKQVN 330
           + A + ++A   L++ E K   RD   +  LI+LY  LG   EV R+W   +    K  N
Sbjct: 241 VDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSN 300

Query: 331 RDYITMLGSLVKLEQLEEAENLLKEWESSCQCYDFRVPNVLLIGYSQKGLIERAEKMLRS 390
             Y+ M+  LVKL  L  AE L KEW+++C  YD R+ NVL+  Y+Q+GLI++A ++   
Sbjct: 301 VAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEK 360

Query: 391 IAREGRIPPPNSWAIIAAGYLEKQNLEKAFKCMNEALALKEQNNG-WRPKPSVVSSILRW 450
             R G      +W I    Y++  ++ +A +CM++A+++ + + G W P P  V +++ +
Sbjct: 361 APRRGGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSY 420

Query: 451 LSENGRYGELKEFLSSLK 459
             +       +  L  LK
Sbjct: 421 FEQKKDVNGAENLLEILK 437

[Close]

BLAST of MS002724.1 vs. TAIR 10
Match: AT4G02820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 241.9 bits (616), Expect = 1.1e-63
Identity = 135/429 (31.47%), Postives = 234/429 (54.55%), Query Frame = 0


Query: 44  RRNLFARISPLGDPELSVVPILDQWIEEGRKIKDFELRRIVRDLRSGRRYGQALEVSEWM 103
           R  L  R+  L   + S V  + +W EEG  ++ +EL RIVR+LR  +RY  ALE+ EWM
Sbjct: 60  RDTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWM 119

Query: 104 SSKGLFPLTTRDFAVQLDLIGRVRGLDSAEKYFSSVSNQEEIGKLYGALLNCYVREGLVD 163
             +    L   D+AV LDLI ++RGL+SAEK+F  + +Q        +LL+ YV+  L D
Sbjct: 120 VVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSD 179

Query: 164 KSLAHMQEMKQMGFASTPLNYNDIMCLYLNTGHVDKVPNVLSEMKENGVLPDNFSYRICI 223
           K+ A  ++M + GF  + L YN ++ +Y++ G  +KVP ++ E+K     PD  +Y + +
Sbjct: 180 KAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIR-TSPDIVTYNLWL 239

Query: 224 NSYGARSDLITMEKVLKEMESQSHISMDWTTYSMVANFFIKASMHEEALNYLRKCEDKVD 283
            ++ + +D+   EKV  + + +  ++ DW TYS++ N + K    E+A   L++ E  V 
Sbjct: 240 TAFASGNDVEGAEKVYLKAKEEK-LNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVS 299

Query: 284 -RDALGFNHLISLYTSLGHNDEVMRLWALQKEKCKKQVNRDYITMLGSLVKLEQLEEAEN 343
            ++ + +  LISL+ +LG  D V   W   K   KK  + +Y++M+ ++VKL + E+A+ 
Sbjct: 300 KKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKG 359

Query: 344 LLKEWESSCQCYDFRVPNVLLIGYSQKGLIERAEKMLRSIAREGRIPPPNSWAIIAAGYL 403
           L  EWES     D R+PN++L  Y  +  +   EK    I  +G  P  ++W I+   YL
Sbjct: 360 LYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYL 419

Query: 404 EKQNLEKAFKCMNEALALKEQNNGWRPKPSVVSSILRWLSENGRYGELKEFLSSLKTVPS 463
           +++++EK   C  +A+   +    W     +V    + L E G     ++ ++ L+    
Sbjct: 420 KRKDMEKVLDCFGKAI---DSVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGY 479

Query: 464 MDGKLHNAL 472
           ++ +L+N+L
Sbjct: 480 VNTQLYNSL 483

The following BLAST results are available for this feature:

BLAST of MS002724.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142737.1	1.5e-274	98.75	pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like [Momor...	[more]
XP_023545982.1	1.5e-237	85.48	pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like [Cucur...	[more]
XP_022989754.1	3.4e-237	85.68	pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like [Cucur...	[more]
KAG6600732.1	9.8e-237	85.27	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_022942045.1	2.2e-236	84.85	pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like [Cucur...	[more]

BLAST of MS002724.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84JR3	6.0e-120	47.15	Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidop...	[more]
Q9SKU6	4.5e-75	35.12	Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop...	[more]
Q8LPS6	2.1e-72	34.26	Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX...	[more]
O22714	4.5e-67	30.59	Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX...	[more]
Q9SY07	1.5e-62	31.47	Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidop...	[more]

BLAST of MS002724.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CNQ2	7.5e-275	98.75	pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like OS=Mom...	[more]
A0A6J1JQ72	1.6e-237	85.68	pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like OS=Cuc...	[more]
A0A6J1FVG8	1.1e-236	84.85	pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like OS=Cuc...	[more]
A0A0A0L7Y2	2.0e-227	81.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G104890 PE=4 SV=1	[more]
A0A1S4DZ16	6.7e-223	80.50	pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like OS=Cuc...	[more]

BLAST of MS002724.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21705.1	4.2e-121	47.15	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G20710.1	3.2e-76	35.12	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G02150.1	1.5e-73	34.26	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G60770.1	3.2e-68	30.59	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G02820.1	1.1e-63	31.47	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 471..481
None	No IPR available	COILS	Coil	Coil	coord: 404..424
None	No IPR available	PANTHER	PTHR45717:SF7	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 34..472
None	No IPR available	PANTHER	PTHR45717	OS12G0527900 PROTEIN	coord: 34..472
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 184..226 e-value: 1.9E-8 score: 34.3
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 360..386 e-value: 0.038 score: 14.3 coord: 149..177 e-value: 4.3E-4 score: 20.3 coord: 324..349 e-value: 0.12 score: 12.6
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 148..177 e-value: 0.0016 score: 16.5 coord: 184..215 e-value: 1.0E-4 score: 20.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 180..214 score: 9.514466
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 145..179 score: 8.549871
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 355..389 score: 8.582755
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 264..477 e-value: 4.3E-19 score: 71.0 coord: 78..262 e-value: 4.7E-22 score: 80.7
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 253..424
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 391..424 score: 8.6734

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS002724	MS002724	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS002724.1-cds	MS002724.1-cds-scaffold66:31785..32933	CDS
MS002724.1-cds	MS002724.1-cds-scaffold66:33721..34014	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS002724.1	MS002724.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding