MS002678.1 (mRNA) Bitter gourd (TR) v1

Overview
NameMS002678.1
TypemRNA
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncleavage and polyadenylation specificity factor subunit 6
Locationscaffold928: 240487 .. 242619 (+)
Sequence length2133
RNA-Seq ExpressionMS002678.1
SyntenyMS002678.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGAAGGTGAGGGAGGGTTCGGTGAGGGTGTGGATCAGATTGATCAGTTTCATCGGAATGAGGCGATTTCTGCCGTTGCTGATGAGGGTTTCTTGGGCGAAGATGAGGATGAGTATGAGGACCTCTACAACGATGTTAATGTTGGGGAGGGGTTTCTTCAGTCGTTGAGGAAGAATGATGATTTGGGATTCAGGAACGAGGAGGAGCCGCCGAAGATTGAGCCTCCTGCAACTTTAGCACCCAGTTCTGGTGCTTCGATACCTGGTGTTGGCGGAGGTGCGACTGAAGTTGCTAGTTTAGGAGATGGCGGGCACAGTGTTCCGGAGAGAGTAACCGAGGGTTACAATCAGATTCCAGATTTAAGAACGAATGAGATGGCTATGAGAGGTGGGGCAGGATCGGGGCCGCCGATGGGTGGGGGAGGCGGGATTAGGGTTGAATTAGGGCAAGGGAGTAAAACCAATGAGTTGGAGGAGCGAAGTAGTAATAACGTAGCCGTGCATCAGGCTCCGCAACAGCCACAGCCACAGCCACAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACCGCAACAGCACCACCATCAACCACTGCACAGCGGAGTTTTAGGAAATCCCGGGAGCGTAGAAAATGACGGTTTGCTAAGGCAAGGTGGAGTAAATGTAAATGGGGTTGGTGGAAATGGGTATGGTAATATGGGGAGTGCAGGGGGAGGTGGCGGTGGAACGATTTTGTTTGTTGGTGATTTACATTGGTGGACTACAGATGCGGAGCTGGAGGTGGAGCTCTGTAAGTATGGTCCTTTAAAGGAGGTTAAATTTTTTGACGAGAAAGCTAGTGGGAAATCAAAAGGCTACTGCCAGGTTGAGTTTTATGATCCTTCTGCTGCCACGGCTTGTAAGGAGGGGATGAATGGGCATGTTTTTAATGGCCGGCCATGCGTTGTTGCCTTTGCATCACCATTTAGCGTTAAGAAGATGGGAGAAGCCCAAGTAAATAGGAACCAACAGATTGCCCAAGCTGCTAATCCTCAAGCAAGGAGAGGTCCTAATGATGCCGCAGGTAAAATTGGTGGAAGTAACATTCAAACGGGTGGTAATTACCAAGGTGGTGATAACAACAGAGGTTCTGGGAGAGGTAATTGGGGGAGAGGCAATGCCCATGGAATGGGAGGTAGAGGACCAGCTGGCCCGATGAGGAATAGGGGTGGTGGGATGGGTGGCAGAGGTATAATGGGGAATGGTGGAAATGGATTTGGCCAAGGAATTGGTGCCACCCCTCCTTTGTTGCATCCTCAGTCAATGATGGGTCAAGGTTTTGATCCATCTTTTGGTGCACCCATGGGACGAATGGGCACCTATGGTGGTTTTCCTGGAGCTCCCGCTCCCCCTTTCTCTGGGATTTTATCGTCATTTCCACCTGTTGGGGGTGTTGGTCTTCCTGGAGTAGCTCCTCATGTGAACCCAGCATTTTTTGGAAGAGGTATGCCTATGAATGGAATGGGGATGATGGCACCATCGGGTGTTGATGGGCCTAATATGGGAATGTGGTCCGACCCTAGTATGGGTGGATGGGGCAGTGAAGAACATGGTGGTGGTAGAGCTGGAGAGTCTAGTTATGGAGAAGAGGCTGGGTCTGACCAACAATATGGTGAAGGTAGTCATGATAGAGGTGGGTGGGCAAATTCTGCTAAGGAGAAAGATAGAGGCTCCGAAAGGGATTGGTCACAGTCTTCTGAAAGAAGGTATCGAGACGATAGAGAGAGATCCAAAGAAAAAGATCCAGGTCCTGACCATGATTGGCAGGATAGAAGGCCACGCGATGATAGAGATGTAGGTCGAGAAAGGGATAAGGATCGTGATCGCGATAGGGAACGTTCTCGAGATTATGAGCGTGGCCATGATCGCGATCGTGATAGAGATCGTGACCGTGATAGGCACAAGGAAGATAGGGACAGGTATTCAGATCATCATAGGTACAGGGACCGTGAACCAGAGCATGAAGATGAGTGGGAAAGGGGGCGATCATCGAGGACTCATAGCAAGTCTAGATTACCACAAGAAGAAGAAAGTCGTTCTAGATCAAGGGATGCTGATTATGGGAAAAGACGGCGGCTTACTTCTGAT

mRNA sequence

ATGGATGAAGGTGAGGGAGGGTTCGGTGAGGGTGTGGATCAGATTGATCAGTTTCATCGGAATGAGGCGATTTCTGCCGTTGCTGATGAGGGTTTCTTGGGCGAAGATGAGGATGAGTATGAGGACCTCTACAACGATGTTAATGTTGGGGAGGGGTTTCTTCAGTCGTTGAGGAAGAATGATGATTTGGGATTCAGGAACGAGGAGGAGCCGCCGAAGATTGAGCCTCCTGCAACTTTAGCACCCAGTTCTGGTGCTTCGATACCTGGTGTTGGCGGAGGTGCGACTGAAGTTGCTAGTTTAGGAGATGGCGGGCACAGTGTTCCGGAGAGAGTAACCGAGGGTTACAATCAGATTCCAGATTTAAGAACGAATGAGATGGCTATGAGAGGTGGGGCAGGATCGGGGCCGCCGATGGGTGGGGGAGGCGGGATTAGGGTTGAATTAGGGCAAGGGAGTAAAACCAATGAGTTGGAGGAGCGAAGTAGTAATAACGTAGCCGTGCATCAGGCTCCGCAACAGCCACAGCCACAGCCACAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACCGCAACAGCACCACCATCAACCACTGCACAGCGGAGTTTTAGGAAATCCCGGGAGCGTAGAAAATGACGGTTTGCTAAGGCAAGGTGGAGTAAATGTAAATGGGGTTGGTGGAAATGGGTATGGTAATATGGGGAGTGCAGGGGGAGGTGGCGGTGGAACGATTTTGTTTGTTGGTGATTTACATTGGTGGACTACAGATGCGGAGCTGGAGGTGGAGCTCTGTAAGTATGGTCCTTTAAAGGAGGTTAAATTTTTTGACGAGAAAGCTAGTGGGAAATCAAAAGGCTACTGCCAGGTTGAGTTTTATGATCCTTCTGCTGCCACGGCTTGTAAGGAGGGGATGAATGGGCATGTTTTTAATGGCCGGCCATGCGTTGTTGCCTTTGCATCACCATTTAGCGTTAAGAAGATGGGAGAAGCCCAAGTAAATAGGAACCAACAGATTGCCCAAGCTGCTAATCCTCAAGCAAGGAGAGGTCCTAATGATGCCGCAGGTAAAATTGGTGGAAGTAACATTCAAACGGGTGGTAATTACCAAGGTGGTGATAACAACAGAGGTTCTGGGAGAGGTAATTGGGGGAGAGGCAATGCCCATGGAATGGGAGGTAGAGGACCAGCTGGCCCGATGAGGAATAGGGGTGGTGGGATGGGTGGCAGAGGTATAATGGGGAATGGTGGAAATGGATTTGGCCAAGGAATTGGTGCCACCCCTCCTTTGTTGCATCCTCAGTCAATGATGGGTCAAGGTTTTGATCCATCTTTTGGTGCACCCATGGGACGAATGGGCACCTATGGTGGTTTTCCTGGAGCTCCCGCTCCCCCTTTCTCTGGGATTTTATCGTCATTTCCACCTGTTGGGGGTGTTGGTCTTCCTGGAGTAGCTCCTCATGTGAACCCAGCATTTTTTGGAAGAGGTATGCCTATGAATGGAATGGGGATGATGGCACCATCGGGTGTTGATGGGCCTAATATGGGAATGTGGTCCGACCCTAGTATGGGTGGATGGGGCAGTGAAGAACATGGTGGTGGTAGAGCTGGAGAGTCTAGTTATGGAGAAGAGGCTGGGTCTGACCAACAATATGGTGAAGGTAGTCATGATAGAGGTGGGTGGGCAAATTCTGCTAAGGAGAAAGATAGAGGCTCCGAAAGGGATTGGTCACAGTCTTCTGAAAGAAGGTATCGAGACGATAGAGAGAGATCCAAAGAAAAAGATCCAGGTCCTGACCATGATTGGCAGGATAGAAGGCCACGCGATGATAGAGATGTAGGTCGAGAAAGGGATAAGGATCGTGATCGCGATAGGGAACGTTCTCGAGATTATGAGCGTGGCCATGATCGCGATCGTGATAGAGATCGTGACCGTGATAGGCACAAGGAAGATAGGGACAGGTATTCAGATCATCATAGGTACAGGGACCGTGAACCAGAGCATGAAGATGAGTGGGAAAGGGGGCGATCATCGAGGACTCATAGCAAGTCTAGATTACCACAAGAAGAAGAAAGTCGTTCTAGATCAAGGGATGCTGATTATGGGAAAAGACGGCGGCTTACTTCTGAT

Coding sequence (CDS)

ATGGATGAAGGTGAGGGAGGGTTCGGTGAGGGTGTGGATCAGATTGATCAGTTTCATCGGAATGAGGCGATTTCTGCCGTTGCTGATGAGGGTTTCTTGGGCGAAGATGAGGATGAGTATGAGGACCTCTACAACGATGTTAATGTTGGGGAGGGGTTTCTTCAGTCGTTGAGGAAGAATGATGATTTGGGATTCAGGAACGAGGAGGAGCCGCCGAAGATTGAGCCTCCTGCAACTTTAGCACCCAGTTCTGGTGCTTCGATACCTGGTGTTGGCGGAGGTGCGACTGAAGTTGCTAGTTTAGGAGATGGCGGGCACAGTGTTCCGGAGAGAGTAACCGAGGGTTACAATCAGATTCCAGATTTAAGAACGAATGAGATGGCTATGAGAGGTGGGGCAGGATCGGGGCCGCCGATGGGTGGGGGAGGCGGGATTAGGGTTGAATTAGGGCAAGGGAGTAAAACCAATGAGTTGGAGGAGCGAAGTAGTAATAACGTAGCCGTGCATCAGGCTCCGCAACAGCCACAGCCACAGCCACAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACCGCAACAGCACCACCATCAACCACTGCACAGCGGAGTTTTAGGAAATCCCGGGAGCGTAGAAAATGACGGTTTGCTAAGGCAAGGTGGAGTAAATGTAAATGGGGTTGGTGGAAATGGGTATGGTAATATGGGGAGTGCAGGGGGAGGTGGCGGTGGAACGATTTTGTTTGTTGGTGATTTACATTGGTGGACTACAGATGCGGAGCTGGAGGTGGAGCTCTGTAAGTATGGTCCTTTAAAGGAGGTTAAATTTTTTGACGAGAAAGCTAGTGGGAAATCAAAAGGCTACTGCCAGGTTGAGTTTTATGATCCTTCTGCTGCCACGGCTTGTAAGGAGGGGATGAATGGGCATGTTTTTAATGGCCGGCCATGCGTTGTTGCCTTTGCATCACCATTTAGCGTTAAGAAGATGGGAGAAGCCCAAGTAAATAGGAACCAACAGATTGCCCAAGCTGCTAATCCTCAAGCAAGGAGAGGTCCTAATGATGCCGCAGGTAAAATTGGTGGAAGTAACATTCAAACGGGTGGTAATTACCAAGGTGGTGATAACAACAGAGGTTCTGGGAGAGGTAATTGGGGGAGAGGCAATGCCCATGGAATGGGAGGTAGAGGACCAGCTGGCCCGATGAGGAATAGGGGTGGTGGGATGGGTGGCAGAGGTATAATGGGGAATGGTGGAAATGGATTTGGCCAAGGAATTGGTGCCACCCCTCCTTTGTTGCATCCTCAGTCAATGATGGGTCAAGGTTTTGATCCATCTTTTGGTGCACCCATGGGACGAATGGGCACCTATGGTGGTTTTCCTGGAGCTCCCGCTCCCCCTTTCTCTGGGATTTTATCGTCATTTCCACCTGTTGGGGGTGTTGGTCTTCCTGGAGTAGCTCCTCATGTGAACCCAGCATTTTTTGGAAGAGGTATGCCTATGAATGGAATGGGGATGATGGCACCATCGGGTGTTGATGGGCCTAATATGGGAATGTGGTCCGACCCTAGTATGGGTGGATGGGGCAGTGAAGAACATGGTGGTGGTAGAGCTGGAGAGTCTAGTTATGGAGAAGAGGCTGGGTCTGACCAACAATATGGTGAAGGTAGTCATGATAGAGGTGGGTGGGCAAATTCTGCTAAGGAGAAAGATAGAGGCTCCGAAAGGGATTGGTCACAGTCTTCTGAAAGAAGGTATCGAGACGATAGAGAGAGATCCAAAGAAAAAGATCCAGGTCCTGACCATGATTGGCAGGATAGAAGGCCACGCGATGATAGAGATGTAGGTCGAGAAAGGGATAAGGATCGTGATCGCGATAGGGAACGTTCTCGAGATTATGAGCGTGGCCATGATCGCGATCGTGATAGAGATCGTGACCGTGATAGGCACAAGGAAGATAGGGACAGGTATTCAGATCATCATAGGTACAGGGACCGTGAACCAGAGCATGAAGATGAGTGGGAAAGGGGGCGATCATCGAGGACTCATAGCAAGTCTAGATTACCACAAGAAGAAGAAAGTCGTTCTAGATCAAGGGATGCTGATTATGGGAAAAGACGGCGGCTTACTTCTGAT

Protein sequence

MDEGEGGFGEGVDQIDQFHRNEAISAVADEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFRNEEEPPKIEPPATLAPSSGASIPGVGGGATEVASLGDGGHSVPERVTEGYNQIPDLRTNEMAMRGGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAVHQAPQQPQPQPQQQQQQQQQQQQPQQHHHQPLHSGVLGNPGSVENDGLLRQGGVNVNGVGGNGYGNMGSAGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMNGHVFNGRPCVVAFASPFSVKKMGEAQVNRNQQIAQAANPQARRGPNDAAGKIGGSNIQTGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMAPSGVDGPNMGMWSDPSMGGWGSEEHGGGRAGESSYGEEAGSDQQYGEGSHDRGGWANSAKEKDRGSERDWSQSSERRYRDDRERSKEKDPGPDHDWQDRRPRDDRDVGRERDKDRDRDRERSRDYERGHDRDRDRDRDRDRHKEDRDRYSDHHRYRDREPEHEDEWERGRSSRTHSKSRLPQEEESRSRSRDADYGKRRRLTSD
Homology
BLAST of MS002678.1 vs. NCBI nr
Match: XP_022139595.1 (cleavage and polyadenylation specificity factor subunit 6 [Momordica charantia])

HSP 1 Score: 1335.1 bits (3454), Expect = 0.0e+00
Identity = 704/711 (99.02%), Postives = 705/711 (99.16%), Query Frame = 0

Query: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGEGGFGEGVDQIDQFHRNEAISAVADEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  DDLGFRNEEEPPKIEPPATLAPSSGASIPGVGGGATEVASLGDGGHSVPERVTEGYNQIP 120
           DDLGFRNEEEPPKIEPPATLAPSSGASIPGVGGGATEVASLGDGGHSVPERVTEGYNQIP
Sbjct: 61  DDLGFRNEEEPPKIEPPATLAPSSGASIPGVGGGATEVASLGDGGHSVPERVTEGYNQIP 120

Query: 121 DLRTNEMAMRGGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAVHQAPQQPQPQPQ 180
           DLRTNEMAMRGGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAVHQAPQQPQPQP 
Sbjct: 121 DLRTNEMAMRGGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAVHQAPQQPQPQP- 180

Query: 181 QQQQQQQQQQQPQQHHHQPLHSGVLGNPGSVENDGLLRQGGVNVNGVGGNGYGNMGSAGG 240
              QQQQQQQQPQQHHHQPLHSGVLGNPGSVENDGLLRQGGVNVNGVGGNGYGNMGSAGG
Sbjct: 181 ---QQQQQQQQPQQHHHQPLHSGVLGNPGSVENDGLLRQGGVNVNGVGGNGYGNMGSAGG 240

Query: 241 GGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDPSAAT 300
           GGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDPSAAT
Sbjct: 241 GGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDPSAAT 300

Query: 301 ACKEGMNGHVFNGRPCVVAFASPFSVKKMGEAQVNRNQQIAQAANPQARRGPNDAAGKIG 360
           ACKEGMNGHVFNGRPCVVAFASPFSVKKMGEAQVNRNQQIAQAANPQARRGPNDA GKIG
Sbjct: 301 ACKEGMNGHVFNGRPCVVAFASPFSVKKMGEAQVNRNQQIAQAANPQARRGPNDAVGKIG 360

Query: 361 GSNIQTGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNG 420
           GSNIQTGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNG
Sbjct: 361 GSNIQTGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNG 420

Query: 421 FGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGV 480
           FGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGV
Sbjct: 421 FGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGV 480

Query: 481 GLPGVAPHVNPAFFGRGMPMNGMGMMAPSGVDGPNMGMWSDPSMGGWGSEEHGGGRAGES 540
           GLPGVAPHVNPAFFGRGMPMNGMGMMAPSGVDGPNMGMWSDPSMGGWGSEEHGGGRAGES
Sbjct: 481 GLPGVAPHVNPAFFGRGMPMNGMGMMAPSGVDGPNMGMWSDPSMGGWGSEEHGGGRAGES 540

Query: 541 SYGEEAGSDQQYGEGSHDRGGWANSAKEKDRGSERDWSQSSERRYRDDRERSKEKDPGPD 600
           SYGEEAGSDQQYGEGSHDRGGWANSAKEKDRGSERDWSQSS+RRYRDDRERSKEKDPGPD
Sbjct: 541 SYGEEAGSDQQYGEGSHDRGGWANSAKEKDRGSERDWSQSSDRRYRDDRERSKEKDPGPD 600

Query: 601 HDWQDRRPRDDRDVGRERDKDRDRDRERSRDYERGHDRDRDRDRDRDRHKEDRDRYSDHH 660
           HDWQDRRPRDDRDVGRERDKDRDRDRE SRDYERGHDRDRDRDRDRDRHKEDRDRYSDHH
Sbjct: 601 HDWQDRRPRDDRDVGRERDKDRDRDRELSRDYERGHDRDRDRDRDRDRHKEDRDRYSDHH 660

Query: 661 RYRDREPEHEDEWERGRSSRTHSKSRLPQEEESRSRSRDADYGKRRRLTSD 712
           RYRDREPEHEDEWERGRSSRTHSKSRLPQEEESRSRSRDADYGKRRRLTSD
Sbjct: 661 RYRDREPEHEDEWERGRSSRTHSKSRLPQEEESRSRSRDADYGKRRRLTSD 707

BLAST of MS002678.1 vs. NCBI nr
Match: XP_038897113.1 (uncharacterized PE-PGRS family protein PE_PGRS46-like [Benincasa hispida])

HSP 1 Score: 1211.4 bits (3133), Expect = 0.0e+00
Identity = 650/718 (90.53%), Postives = 675/718 (94.01%), Query Frame = 0

Query: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGEGGFGEGVDQIDQFHRNEAISAVAD+GFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  DDLGFRNEEEPPKIEPPATLAPSSGASIPGVGGGATEVASLGDGGHSVPERVTEGYNQIP 120
           DDLGF+ EE  PK+EPPA + PSSGASIPGVGGGATEVA LGDGGHSV ERVTEGYNQIP
Sbjct: 61  DDLGFKTEE--PKMEPPAPVPPSSGASIPGVGGGATEVAGLGDGGHSVSERVTEGYNQIP 120

Query: 121 DLRTNEMAMRGGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAVHQAPQQPQPQPQ 180
           DLRTNEMA+RGG GSGPP+GGGGGIRVELGQGSKT+ELEERSSNNV  HQA         
Sbjct: 121 DLRTNEMAVRGGVGSGPPVGGGGGIRVELGQGSKTSELEERSSNNVVAHQA--------- 180

Query: 181 QQQQQQQQQQQPQ-QHHHQPLHSGVLGNPGSVENDGLLRQGGV-NVNGVGGNGYGNMGSA 240
           Q Q QQQ Q QPQ QHHHQP  SGVLGNPGSVEN+GLLRQGGV NVNGVGGN +GNMGSA
Sbjct: 181 QHQHQQQPQPQPQPQHHHQPPQSGVLGNPGSVENEGLLRQGGVINVNGVGGNAFGNMGSA 240

Query: 241 GGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDPSA 300
           GGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKF+DEKASGKSKGYCQVEFYDPSA
Sbjct: 241 GGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSA 300

Query: 301 ATACKEGMNGHVFNGRPCVVAFASPFSVKKMGEAQVNRNQQIAQAANPQARRGPNDAAGK 360
           ATACKEGMNGH+FNGRPCVVA+ASPFSVKKMGEAQVNRNQQ+AQA NPQARRGPNDA GK
Sbjct: 301 ATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGPNDAVGK 360

Query: 361 IGGSNIQTGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGIMGNGG 420
           IGGS+I TGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMR+RGGGMGGRGIMGNGG
Sbjct: 361 IGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGG 420

Query: 421 NGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVG 480
           NGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVG
Sbjct: 421 NGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVG 480

Query: 481 GVGLPGVAPHVNPAFFGRGMPMNGMGMMAPSGVDGPNMGMWSDPSMGGWGSEEHGGGRAG 540
           GVGLPGVAPHVNPAFFGRGMPMNGMGMM  SGVDGPNMGMWSDPSMGGWGSEEHGGGRAG
Sbjct: 481 GVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRAG 540

Query: 541 ESSYGEEAGSDQQYGEGSHDRGGWANSAKEKDRGSERDWSQSSERRYRDDRERSKEKDPG 600
           ESSYGEEAGSDQQYGEGSH+RG WANSAKEKDRGSERDWSQSS+RRYRDDRERSKEKDPG
Sbjct: 541 ESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRERSKEKDPG 600

Query: 601 PDHDWQDRRPRDDRDVGRERDK--DRDRDRERSRDYERGH---DRDRDRDRDRDRHKEDR 660
           PDHDW DRRPRDDRD+GRERDK  DRDRDRERSRDYERGH   +RDRDRDRDRDR+KEDR
Sbjct: 601 PDHDWPDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHDRERDRDRDRDRDRYKEDR 660

Query: 661 DRYSDHHRYRDREPEHEDEWERGRSSRTHSKSRLPQEEESRSRSRDADYGKRRRLTSD 712
           DRY DHHRYRDREPEHE++WERGRSSRTHSKSRL Q+EE+RSRSRD DYGKRRRLTS+
Sbjct: 661 DRYFDHHRYRDREPEHEEDWERGRSSRTHSKSRLSQDEENRSRSRDVDYGKRRRLTSE 707

BLAST of MS002678.1 vs. NCBI nr
Match: XP_023535463.1 (cleavage and polyadenylation specificity factor subunit 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1206.8 bits (3121), Expect = 0.0e+00
Identity = 649/723 (89.76%), Postives = 679/723 (93.91%), Query Frame = 0

Query: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGEGG G G DQIDQFHRNEAISAVAD+GFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  DDLGFRNEEEPPKIEPPATLAPSSGASIPGVGGGATEVASLGDGGHSVPERVTEGYNQIP 120
           DDLGF++EEE PK+EPPA + P+SGASIPG GGG T+V  LGDGGHSV ERVTEGYNQIP
Sbjct: 61  DDLGFKSEEE-PKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTEGYNQIP 120

Query: 121 DLRTNEMAMRGGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAVHQAPQQPQPQPQ 180
           DLRTNEMA+R GAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVA HQAPQQPQPQPQ
Sbjct: 121 DLRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPQQPQPQPQ 180

Query: 181 QQQQ--QQQQQQQPQQHHHQPLHSGVLGNPGSVENDGLLRQ-GGVNVNGVGGNGYGNMGS 240
           QQ Q   Q Q QQ  QHHHQ    GVLGNP SVEN+GLLRQ GGVNVNGVGGNG+GN+G+
Sbjct: 181 QQLQPPAQPQPQQQTQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVGN 240

Query: 241 A----GGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEF 300
           A    GGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEF
Sbjct: 241 AGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEF 300

Query: 301 YDPSAATACKEGMNGHVFNGRPCVVAFASPFSVKKMGEAQVNRNQQIAQAANPQARRGPN 360
           YDPSAATACKEGMNGH+FNGRPCVVA+ASPFSVK+MGEAQVNRNQQ+AQA NPQARRGPN
Sbjct: 301 YDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGPN 360

Query: 361 DAAGKIGGSNIQTGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGI 420
           D  GK+GGS+I TGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGI
Sbjct: 361 DTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGI 420

Query: 421 MGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSS 480
           MGNGGNGFGQG+GATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSS
Sbjct: 421 MGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSS 480

Query: 481 FPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMAPSGVDGPNMGMWSDPSMGGWGSEEHG 540
           FPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMM  SGVDGPNMGMWSDPSMGGWGSEEHG
Sbjct: 481 FPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHG 540

Query: 541 GGRAGESSYGEEAGSDQQYGEGSHDRGGWANSAKEKDRGSERDWSQSSERRYRDDRERSK 600
           GGRAGESSYGEEAGSDQQYGEGSH+RG WANSAKEKDRGSERDWSQSS+RRYRDDRERSK
Sbjct: 541 GGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRERSK 600

Query: 601 EKDPGPDHDWQDRRPRDDRDVGRERDKDRDRDR--ERSRDYERGH---DRDRDRDRDRDR 660
           EKDPGPDHDW DRRPRDDRD+GRER+KDRDRDR  ERSRDYERGH   DRDRDRDRDRDR
Sbjct: 601 EKDPGPDHDWPDRRPRDDRDIGREREKDRDRDRDKERSRDYERGHHDRDRDRDRDRDRDR 660

Query: 661 HKEDRDRYSDHHRYRDREPEHEDEWERGRSSRTHSKSRLPQEEESRSRSRDADYGKRRRL 712
           +KEDRDRYSDHHRYRDREPEH+++WERGRSSRTHSKSRLPQEEE+RSR+RDADYGKRRRL
Sbjct: 661 YKEDRDRYSDHHRYRDREPEHDEDWERGRSSRTHSKSRLPQEEENRSRTRDADYGKRRRL 720

BLAST of MS002678.1 vs. NCBI nr
Match: XP_038897335.1 (cleavage and polyadenylation specificity factor subunit 6-like [Benincasa hispida] >XP_038897338.1 cleavage and polyadenylation specificity factor subunit 6-like [Benincasa hispida])

HSP 1 Score: 1202.2 bits (3109), Expect = 0.0e+00
Identity = 645/723 (89.21%), Postives = 671/723 (92.81%), Query Frame = 0

Query: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDE EGGFGEGVDQIDQFHRNEAISAVAD+GFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDESEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  DDLGFRNEEEPPKIEPPATLAPSSGASIPGVGGGATEVASLGDGGHSVPERVTEGYNQIP 120
           DDLGF+ EE  PK+EPPA   PSSGASIPGVGGGATEVA LGDGGHSV ERVTEGYNQIP
Sbjct: 61  DDLGFKTEE--PKMEPPAPAPPSSGASIPGVGGGATEVAGLGDGGHSVSERVTEGYNQIP 120

Query: 121 DLRTNEMAMRGGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAVHQAPQQPQPQPQ 180
           D+R NEMA+RGGAG GPP+GGGGGIRVELGQGSKTNELEERS+NN+A HQAPQQ QPQ Q
Sbjct: 121 DIRANEMAIRGGAGPGPPVGGGGGIRVELGQGSKTNELEERSNNNIAAHQAPQQQQPQLQ 180

Query: 181 QQQQQQQQQQQPQQHHHQPLHSGVLGNPGSVENDGLLRQ-GGVNVNGVGGNGYGNMGSAG 240
            Q Q         QHHHQP  SGVLGNPGSVEN+GLLRQ GGVNVNGVGGNG+GNMGSAG
Sbjct: 181 AQPQ--------PQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNMGSAG 240

Query: 241 GGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDPSAA 300
           GGGGGTILFVGDLHWWTTDAELE ELCKYGPLKEVKF+DEKASGKSKGYCQVEFYDPSAA
Sbjct: 241 GGGGGTILFVGDLHWWTTDAELEAELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAA 300

Query: 301 TACKEGMNGHVFNGRPCVVAFASPFSVKKMGEAQVNRNQQIAQAANPQARRGPNDAAGKI 360
           TACKEGMNGH+FNGRPCVVA+ASPFSVK+MGEAQVNRNQQ++QA NPQARRGPNDA GKI
Sbjct: 301 TACKEGMNGHIFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQATNPQARRGPNDAVGKI 360

Query: 361 GGSNIQTGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGN 420
           GGSNI TGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMR+RGGGMGGRGIMGNGGN
Sbjct: 361 GGSNIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGN 420

Query: 421 GFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGG 480
           GFGQGIGA PPLLHPQSMM QGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGG
Sbjct: 421 GFGQGIGAAPPLLHPQSMMAQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGG 480

Query: 481 VGLPGVAPHVNPAFFGRGMPMNGMGMMAPSGVDGPNMGMWSDPSMGGWGSEEHGGGRAGE 540
           VGLPGVAPHVNPAFFGRGMPMNGMGMM  SGVDGPNMGMWSDPSMGGWGSEEHGGGRA E
Sbjct: 481 VGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRADE 540

Query: 541 SSYGEEAGSDQQYGEGSHDRGGWANSAKEKDRGSERDWSQSSERRYRD------DRERSK 600
           SSYGEEAGSDQQYGEGSHDRG WANS KEKDRGSERDWSQSS+RRYRD      DRERSK
Sbjct: 541 SSYGEEAGSDQQYGEGSHDRGAWANSTKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSK 600

Query: 601 EKDPGPDHDWQDRRPRDDRDVGRERDK--DRDRDRERSRDYERGH---DRDRDRDRDRDR 660
           EKDPGPDHDW DRRPRDDRD+GRERDK  DRDRDRERSRDYERGH   DR+RDRDRDRDR
Sbjct: 601 EKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERDRDRDRDR 660

Query: 661 HKEDRDRYSDHHRYRDREPEHEDEWERGRSSRTHSKSRLPQEEESRSRSRDADYGKRRRL 712
           +KEDRDRYSDHHRYRDREPEHE++WERGRSSRTHSKSRL QEEE+RSR+RDADYGKRRRL
Sbjct: 661 YKEDRDRYSDHHRYRDREPEHEEDWERGRSSRTHSKSRLSQEEENRSRTRDADYGKRRRL 713

BLAST of MS002678.1 vs. NCBI nr
Match: XP_022936014.1 (cleavage and polyadenylation specificity factor subunit CG7185-like [Cucurbita moschata] >XP_022936015.1 cleavage and polyadenylation specificity factor subunit CG7185-like [Cucurbita moschata])

HSP 1 Score: 1199.9 bits (3103), Expect = 0.0e+00
Identity = 647/725 (89.24%), Postives = 676/725 (93.24%), Query Frame = 0

Query: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGEGG G G DQIDQFHRNEAISAVAD+GFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  DDLGFRNEEEPPKIEPPATLAPSSGASIPGVGGGATEVASLGDGGHSVPERVTEGYNQIP 120
           DDLGF++EEE PK+EPPA + P+SGASIPG GGG T+V  LGDGGHSV ERVTEGYNQIP
Sbjct: 61  DDLGFKSEEE-PKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTEGYNQIP 120

Query: 121 DLRTNEMAMRGGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAVHQAPQQPQPQPQ 180
           DLRTNEMA+R GAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVA HQAP Q QPQP 
Sbjct: 121 DLRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPPQQQPQPL 180

Query: 181 QQ----QQQQQQQQQPQQHHHQPLHSGVLGNPGSVENDGLLRQ-GGVNVNGVGGNGYGNM 240
           QQ     Q Q Q QQ  QHHHQ    GVLGNP SVEN+GLLRQ GGVNVNGVGGNG+GN+
Sbjct: 181 QQLQPPAQPQPQPQQQTQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNV 240

Query: 241 GSA----GGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQV 300
           G+A    GGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQV
Sbjct: 241 GNAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQV 300

Query: 301 EFYDPSAATACKEGMNGHVFNGRPCVVAFASPFSVKKMGEAQVNRNQQIAQAANPQARRG 360
           EFYDPSAATACKEGMNGH+FNGRPCVVA+ASPFSVK+MGEAQVNRNQQ+AQA NPQARRG
Sbjct: 301 EFYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRG 360

Query: 361 PNDAAGKIGGSNIQTGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGR 420
           PND  GK+GGS+I TGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGR
Sbjct: 361 PNDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGR 420

Query: 421 GIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGIL 480
           GIMGNGGNGFGQG+GATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGIL
Sbjct: 421 GIMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGIL 480

Query: 481 SSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMAPSGVDGPNMGMWSDPSMGGWGSEE 540
           SSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMM  SGVDGPNMGMWSDPSMGGWGSEE
Sbjct: 481 SSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEE 540

Query: 541 HGGGRAGESSYGEEAGSDQQYGEGSHDRGGWANSAKEKDRGSERDWSQSSERRYRDDRER 600
           HGGGRAGESSYGEEAGSDQQYGEGSH+RG WANSAKEKDRGSERDWSQSS+RRYRDDRER
Sbjct: 541 HGGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRER 600

Query: 601 SKEKDPGPDHDWQDRRPRDDRDVGRERDKDRDRDR--ERSRDYERGH---DRDRDRDRDR 660
           SKEKDPGPDHDW DRRPRDDRD+GRERDKDRDRDR  ERSRDYERGH   DRDRDRDRDR
Sbjct: 601 SKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRDRDR 660

Query: 661 DRHKEDRDRYSDHHRYRDREPEHEDEWERGRSSRTHSKSRLPQEEESRSRSRDADYGKRR 712
           DR+KEDRDRYSDHHRYRDREPEH+++WERGRSSRTHSKSRLPQEEE+RSR+RDADYGKRR
Sbjct: 661 DRYKEDRDRYSDHHRYRDREPEHDEDWERGRSSRTHSKSRLPQEEENRSRTRDADYGKRR 720

BLAST of MS002678.1 vs. ExPASy TrEMBL
Match: A0A6J1CCR1 (cleavage and polyadenylation specificity factor subunit 6 OS=Momordica charantia OX=3673 GN=LOC111010455 PE=4 SV=1)

HSP 1 Score: 1335.1 bits (3454), Expect = 0.0e+00
Identity = 704/711 (99.02%), Postives = 705/711 (99.16%), Query Frame = 0

Query: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGEGGFGEGVDQIDQFHRNEAISAVADEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  DDLGFRNEEEPPKIEPPATLAPSSGASIPGVGGGATEVASLGDGGHSVPERVTEGYNQIP 120
           DDLGFRNEEEPPKIEPPATLAPSSGASIPGVGGGATEVASLGDGGHSVPERVTEGYNQIP
Sbjct: 61  DDLGFRNEEEPPKIEPPATLAPSSGASIPGVGGGATEVASLGDGGHSVPERVTEGYNQIP 120

Query: 121 DLRTNEMAMRGGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAVHQAPQQPQPQPQ 180
           DLRTNEMAMRGGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAVHQAPQQPQPQP 
Sbjct: 121 DLRTNEMAMRGGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAVHQAPQQPQPQP- 180

Query: 181 QQQQQQQQQQQPQQHHHQPLHSGVLGNPGSVENDGLLRQGGVNVNGVGGNGYGNMGSAGG 240
              QQQQQQQQPQQHHHQPLHSGVLGNPGSVENDGLLRQGGVNVNGVGGNGYGNMGSAGG
Sbjct: 181 ---QQQQQQQQPQQHHHQPLHSGVLGNPGSVENDGLLRQGGVNVNGVGGNGYGNMGSAGG 240

Query: 241 GGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDPSAAT 300
           GGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDPSAAT
Sbjct: 241 GGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDPSAAT 300

Query: 301 ACKEGMNGHVFNGRPCVVAFASPFSVKKMGEAQVNRNQQIAQAANPQARRGPNDAAGKIG 360
           ACKEGMNGHVFNGRPCVVAFASPFSVKKMGEAQVNRNQQIAQAANPQARRGPNDA GKIG
Sbjct: 301 ACKEGMNGHVFNGRPCVVAFASPFSVKKMGEAQVNRNQQIAQAANPQARRGPNDAVGKIG 360

Query: 361 GSNIQTGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNG 420
           GSNIQTGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNG
Sbjct: 361 GSNIQTGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNG 420

Query: 421 FGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGV 480
           FGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGV
Sbjct: 421 FGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGV 480

Query: 481 GLPGVAPHVNPAFFGRGMPMNGMGMMAPSGVDGPNMGMWSDPSMGGWGSEEHGGGRAGES 540
           GLPGVAPHVNPAFFGRGMPMNGMGMMAPSGVDGPNMGMWSDPSMGGWGSEEHGGGRAGES
Sbjct: 481 GLPGVAPHVNPAFFGRGMPMNGMGMMAPSGVDGPNMGMWSDPSMGGWGSEEHGGGRAGES 540

Query: 541 SYGEEAGSDQQYGEGSHDRGGWANSAKEKDRGSERDWSQSSERRYRDDRERSKEKDPGPD 600
           SYGEEAGSDQQYGEGSHDRGGWANSAKEKDRGSERDWSQSS+RRYRDDRERSKEKDPGPD
Sbjct: 541 SYGEEAGSDQQYGEGSHDRGGWANSAKEKDRGSERDWSQSSDRRYRDDRERSKEKDPGPD 600

Query: 601 HDWQDRRPRDDRDVGRERDKDRDRDRERSRDYERGHDRDRDRDRDRDRHKEDRDRYSDHH 660
           HDWQDRRPRDDRDVGRERDKDRDRDRE SRDYERGHDRDRDRDRDRDRHKEDRDRYSDHH
Sbjct: 601 HDWQDRRPRDDRDVGRERDKDRDRDRELSRDYERGHDRDRDRDRDRDRHKEDRDRYSDHH 660

Query: 661 RYRDREPEHEDEWERGRSSRTHSKSRLPQEEESRSRSRDADYGKRRRLTSD 712
           RYRDREPEHEDEWERGRSSRTHSKSRLPQEEESRSRSRDADYGKRRRLTSD
Sbjct: 661 RYRDREPEHEDEWERGRSSRTHSKSRLPQEEESRSRSRDADYGKRRRLTSD 707

BLAST of MS002678.1 vs. ExPASy TrEMBL
Match: A0A6J1F726 (cleavage and polyadenylation specificity factor subunit CG7185-like OS=Cucurbita moschata OX=3662 GN=LOC111442737 PE=4 SV=1)

HSP 1 Score: 1199.9 bits (3103), Expect = 0.0e+00
Identity = 647/725 (89.24%), Postives = 676/725 (93.24%), Query Frame = 0

Query: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGEGG G G DQIDQFHRNEAISAVAD+GFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  DDLGFRNEEEPPKIEPPATLAPSSGASIPGVGGGATEVASLGDGGHSVPERVTEGYNQIP 120
           DDLGF++EEE PK+EPPA + P+SGASIPG GGG T+V  LGDGGHSV ERVTEGYNQIP
Sbjct: 61  DDLGFKSEEE-PKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTEGYNQIP 120

Query: 121 DLRTNEMAMRGGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAVHQAPQQPQPQPQ 180
           DLRTNEMA+R GAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVA HQAP Q QPQP 
Sbjct: 121 DLRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPPQQQPQPL 180

Query: 181 QQ----QQQQQQQQQPQQHHHQPLHSGVLGNPGSVENDGLLRQ-GGVNVNGVGGNGYGNM 240
           QQ     Q Q Q QQ  QHHHQ    GVLGNP SVEN+GLLRQ GGVNVNGVGGNG+GN+
Sbjct: 181 QQLQPPAQPQPQPQQQTQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNV 240

Query: 241 GSA----GGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQV 300
           G+A    GGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQV
Sbjct: 241 GNAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQV 300

Query: 301 EFYDPSAATACKEGMNGHVFNGRPCVVAFASPFSVKKMGEAQVNRNQQIAQAANPQARRG 360
           EFYDPSAATACKEGMNGH+FNGRPCVVA+ASPFSVK+MGEAQVNRNQQ+AQA NPQARRG
Sbjct: 301 EFYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRG 360

Query: 361 PNDAAGKIGGSNIQTGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGR 420
           PND  GK+GGS+I TGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGR
Sbjct: 361 PNDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGR 420

Query: 421 GIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGIL 480
           GIMGNGGNGFGQG+GATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGIL
Sbjct: 421 GIMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGIL 480

Query: 481 SSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMAPSGVDGPNMGMWSDPSMGGWGSEE 540
           SSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMM  SGVDGPNMGMWSDPSMGGWGSEE
Sbjct: 481 SSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEE 540

Query: 541 HGGGRAGESSYGEEAGSDQQYGEGSHDRGGWANSAKEKDRGSERDWSQSSERRYRDDRER 600
           HGGGRAGESSYGEEAGSDQQYGEGSH+RG WANSAKEKDRGSERDWSQSS+RRYRDDRER
Sbjct: 541 HGGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRER 600

Query: 601 SKEKDPGPDHDWQDRRPRDDRDVGRERDKDRDRDR--ERSRDYERGH---DRDRDRDRDR 660
           SKEKDPGPDHDW DRRPRDDRD+GRERDKDRDRDR  ERSRDYERGH   DRDRDRDRDR
Sbjct: 601 SKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRDRDR 660

Query: 661 DRHKEDRDRYSDHHRYRDREPEHEDEWERGRSSRTHSKSRLPQEEESRSRSRDADYGKRR 712
           DR+KEDRDRYSDHHRYRDREPEH+++WERGRSSRTHSKSRLPQEEE+RSR+RDADYGKRR
Sbjct: 661 DRYKEDRDRYSDHHRYRDREPEHDEDWERGRSSRTHSKSRLPQEEENRSRTRDADYGKRR 720

BLAST of MS002678.1 vs. ExPASy TrEMBL
Match: A0A6J1ILS2 (cleavage and polyadenylation specificity factor subunit 6-like OS=Cucurbita maxima OX=3661 GN=LOC111476425 PE=4 SV=1)

HSP 1 Score: 1199.1 bits (3101), Expect = 0.0e+00
Identity = 647/723 (89.49%), Postives = 676/723 (93.50%), Query Frame = 0

Query: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGEGG G G DQIDQFHRNEAISAVAD+GFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  DDLGFRNEEEPPKIEPPATLAPSSGASIPGVGGGATEVASLGDGGHSVPERVTEGYNQIP 120
           DDLGF++EEE PK+EPPA + P+SGASIPG GGG T+V  LGDGGHSV ERVTEGYNQIP
Sbjct: 61  DDLGFKSEEE-PKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTEGYNQIP 120

Query: 121 DLRTNEMAMRGGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAVHQAPQQPQPQPQ 180
           DLR NEMA+R GAGSGPP+GGGGGIRVELGQGSKTNELEERSSNNVA HQAPQQ QPQPQ
Sbjct: 121 DLRANEMAIRVGAGSGPPIGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPQQQQPQPQ 180

Query: 181 QQQQ--QQQQQQQPQQHHHQPLHSGVLGNPGSVENDGLLRQ-GGVNVNGVGGNGYGNMGS 240
           QQ Q   Q Q QQ  QHHHQ    GVLGNP SVEN+GLLRQ GGVNVNGVGGNG+GN+GS
Sbjct: 181 QQLQPPAQPQPQQQTQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVGS 240

Query: 241 A----GGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEF 300
           A    GGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEF
Sbjct: 241 AGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEF 300

Query: 301 YDPSAATACKEGMNGHVFNGRPCVVAFASPFSVKKMGEAQVNRNQQIAQAANPQARRGPN 360
           YDPSAATACKEGMNGH+FNGRPCVVA+ASPFSVK+MGEAQVNRNQQ+AQA NPQARRGPN
Sbjct: 301 YDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGPN 360

Query: 361 DAAGKIGGSNIQTGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGI 420
           D  GK+GGS+I TGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGI
Sbjct: 361 DTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGI 420

Query: 421 MGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSS 480
           MGNGGNGFGQG+GATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSS
Sbjct: 421 MGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSS 480

Query: 481 FPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMAPSGVDGPNMGMWSDPSMGGWGSEEHG 540
           FPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMM  SGVDGPNMGMWSDPSMGGWGSEEHG
Sbjct: 481 FPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHG 540

Query: 541 GGRAGESSYGEEAGSDQQYGEGSHDRGGWANSAKEKDRGSERDWSQSSERRYRDDRERSK 600
           GGRAGESSYGEEAGSDQQYGEGSH+RG WANSAKEKDRGSERDWSQSS+RRYRDDRERSK
Sbjct: 541 GGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRERSK 600

Query: 601 EKDPGPDHDWQDRRPRDDRDVGRERDKDRDRDR--ERSRDYERGH---DRDRDRDRDRDR 660
           EKD GPDHDW DRRPRDDRD+GRERDKDRDRDR  ERSRDYERGH   DRDRDRDRDRDR
Sbjct: 601 EKDLGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRDRDRDR 660

Query: 661 HKEDRDRYSDHHRYRDREPEHEDEWERGRSSRTHSKSRLPQEEESRSRSRDADYGKRRRL 712
           +KEDRDRYSDHHRYRDREPEH+++WERGRSSRTHSKSRLPQEEE+RSR+RDADYGKRRRL
Sbjct: 661 YKEDRDRYSDHHRYRDREPEHDEDWERGRSSRTHSKSRLPQEEENRSRTRDADYGKRRRL 720

BLAST of MS002678.1 vs. ExPASy TrEMBL
Match: A0A5D3CC60 (Cleavage and polyadenylation specificity factor subunit 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00770 PE=4 SV=1)

HSP 1 Score: 1180.6 bits (3053), Expect = 0.0e+00
Identity = 640/726 (88.15%), Postives = 671/726 (92.42%), Query Frame = 0

Query: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGEGGFGEGVDQIDQFHRNEAISAVAD+GFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  DDLGFRNEEEPPKIEPPATLAPSSGASIPGVGGGATEVASLGD-GGHSVPERVTEGYNQI 120
           D LGF+ EEE PK+EPPA + P+SGASIPG+GGGATEV  LGD GGH+V ERVTEGYNQI
Sbjct: 61  DGLGFKREEE-PKMEPPAPVPPTSGASIPGIGGGATEVTGLGDAGGHTVSERVTEGYNQI 120

Query: 121 PDLRTNEMAMRGGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAVHQAPQQPQPQP 180
           PDLRTNEMA+RGGAGSGPP+GGG GIRVELGQGSK  ELEERSSNNVA HQAPQQPQ QP
Sbjct: 121 PDLRTNEMAIRGGAGSGPPVGGGVGIRVELGQGSKPIELEERSSNNVAGHQAPQQPQLQP 180

Query: 181 QQQQQQQQQQQQPQQHHHQPLHSGVLGNPGSVENDGLLRQ-GGVNVNGVGGNGYGNMGSA 240
           Q Q           QHHHQP  SGVLGNPGSVEN+GLLRQ GGVNVNGVGGNG+GN+GSA
Sbjct: 181 QPQ----------PQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNVGSA 240

Query: 241 GGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDPSA 300
           GGG GGT+LFVGDLHWWTTDAELEVELCKYGPLKEVKF+DEKASGKSKGYCQVEFYDPSA
Sbjct: 241 GGGSGGTVLFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSA 300

Query: 301 ATACKEGMNGHVFNGRPCVVAFASPFSVKKMGEAQVNRNQQIAQAANPQARRGPNDAAGK 360
           ATACKEGMNGH+FNGRPCVVA+ASPFSVKKMGEAQVNRNQQIAQA NPQARR PNDA GK
Sbjct: 301 ATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGK 360

Query: 361 IGGSNIQTGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGIMGNGG 420
           IGGS+I TGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMR RGGG+GGRGIMGNGG
Sbjct: 361 IGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRGRGGGIGGRGIMGNGG 420

Query: 421 NGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVG 480
           NGFGQGIGATPPLLHPQSMMGQGFDPSFGAP+GRMGTYGGFPGAPAPPFSGILSSFPPVG
Sbjct: 421 NGFGQGIGATPPLLHPQSMMGQGFDPSFGAPIGRMGTYGGFPGAPAPPFSGILSSFPPVG 480

Query: 481 GVGLPGVAPHVNPAFFGRGMPMNGMGMMAPSGVDGPNMGMWSDPSMGGWGSEEHGGGRAG 540
           GVGLPGVAPHVNPAFFGRGMPMNGMGMM  SGVDGPNMGMWSDPSMGGWGSEE GGGRAG
Sbjct: 481 GVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEQGGGRAG 540

Query: 541 ESSYGEEAGSDQQYGEGSHDRGGWANSAKEKDRGSERDWSQSSERRYRD------DRERS 600
           ESSYGEEAGSDQ YGEGSH+RG WANSAKEKDRGSERDWSQSS+RRYRD      DRERS
Sbjct: 541 ESSYGEEAGSDQHYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRERS 600

Query: 601 KEKDPGPDHDWQDRRPRDDRDVGRERDK--DRDRDRERSRDYERGH---DRDRDRDRDRD 660
           KEKDPGPDHDW DRRPRDDRD+GRERDK  DRDRDRERSRDYERGH   DR+R+RDRDRD
Sbjct: 601 KEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHERDRERERDRDRD 660

Query: 661 RHKEDRDRYSDHHRYRDREPEHEDEWERGRSSRT--HSKSRLPQEEESRSRSRDADYGKR 712
           R+K+DR+RYSDHHRYRDREPEH+++WERGRSSRT  HSKSRL QEEESRSRSRDADYGKR
Sbjct: 661 RYKDDRERYSDHHRYRDREPEHDEDWERGRSSRTHSHSKSRLSQEEESRSRSRDADYGKR 715

BLAST of MS002678.1 vs. ExPASy TrEMBL
Match: A0A6J1ITV5 (cleavage and polyadenylation specificity factor subunit CG7185-like OS=Cucurbita maxima OX=3661 GN=LOC111480534 PE=4 SV=1)

HSP 1 Score: 1172.5 bits (3032), Expect = 0.0e+00
Identity = 633/718 (88.16%), Postives = 661/718 (92.06%), Query Frame = 0

Query: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGEGGFGEGVDQIDQFHRNEAISAVAD+GFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  DDLGFRNEEEPPKIEPPATLAPSSGASIPGVGGGATEVASLGDGGHSVPERVTEGYNQIP 120
           +DLGF+N EE PK EPPA +APSSGASIPGVGGGATEV+ LGDGG SV  R TEGYNQIP
Sbjct: 61  EDLGFKNVEE-PKREPPAAVAPSSGASIPGVGGGATEVSGLGDGGPSVSVRPTEGYNQIP 120

Query: 121 DLRTNEMAMRGGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAVHQAPQQPQPQPQ 180
           DLRTNEMA+RGGAGSGPP+GGGGGIRVELGQGSKTNEL+ERSSNN A HQAP        
Sbjct: 121 DLRTNEMAIRGGAGSGPPIGGGGGIRVELGQGSKTNELDERSSNNAAAHQAP-------- 180

Query: 181 QQQQQQQQQQQPQQHHHQPLHSGVLGNPGSVENDGLLRQ-GGVNVNGVGGNGYGNMGSAG 240
             QQQQQQQQQ QQHH QP   G+LGNPG+VEN+GLLRQ GGVNVNG GGNG GNMG+AG
Sbjct: 181 --QQQQQQQQQQQQHHPQPPQGGLLGNPGNVENEGLLRQGGGVNVNGAGGNGLGNMGNAG 240

Query: 241 GGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDPSAA 300
           GGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYD SAA
Sbjct: 241 GGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDSSAA 300

Query: 301 TACKEGMNGHVFNGRPCVVAFASPFSVKKMGEAQVNRNQQIAQAANPQARRGPNDAAGKI 360
           TACKEGMNGH+FNGRPCVVAFASPFSVK+MGEAQVNRNQQIAQA NPQARRGPN+AAGKI
Sbjct: 301 TACKEGMNGHIFNGRPCVVAFASPFSVKRMGEAQVNRNQQIAQATNPQARRGPNEAAGKI 360

Query: 361 GGSNIQTGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGN 420
           GGSNI TGGNYQG DNNRGSGRGNWGRGNAHGMGGRGPAG MR RGGGMGGRGIMGNGG 
Sbjct: 361 GGSNIATGGNYQGVDNNRGSGRGNWGRGNAHGMGGRGPAGLMRGRGGGMGGRGIMGNGGT 420

Query: 421 GFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGG 480
           GFGQGIG TPPLLHPQSMMGQGFDP+FGAPMGRMG YGGFPGAPAPPFSGILSSFPPVGG
Sbjct: 421 GFGQGIGGTPPLLHPQSMMGQGFDPTFGAPMGRMGAYGGFPGAPAPPFSGILSSFPPVGG 480

Query: 481 VGLPGVAPHVNPAFFGRGMPMNGMGMMAPSGVDGPNMGMWSDPSMGGWGSEEHGGGRAGE 540
           VGLPGVAPHVNPAFFGRGMPMNGMGMM  SGVDG NMGMW+DPSMGGWGSEEHGGGRAGE
Sbjct: 481 VGLPGVAPHVNPAFFGRGMPMNGMGMMPSSGVDGHNMGMWTDPSMGGWGSEEHGGGRAGE 540

Query: 541 SSYGEEAGSDQQYGEGSHDRGGWANSAKEKDRGSERDWSQSSERRYRD------DRERSK 600
           SSYGEEAGSDQQYGEGSH+RG WANSAKEKDRGSERDWSQSS+RRYRD      DRE SK
Sbjct: 541 SSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRDGGYDRETSK 600

Query: 601 EKDPGPDHDWQDRRPRDDRDVGRERDKDRDRDRERSRDYERGHDRDRDRDRDRDRHKEDR 660
           EKDPGP+HDW DRRPRDDRD+GRERDK RDRDRERSRD+ERGH    DRDRDRDR+KEDR
Sbjct: 601 EKDPGPEHDWPDRRPRDDRDIGRERDKVRDRDRERSRDHERGH---HDRDRDRDRYKEDR 660

Query: 661 DRYSDHHRYRDREPEHEDEWERGRSSRTHSKSRLPQEEESRSRSRDADYGKRRRLTSD 712
           DRYSDH RYRDREPEHE+EW+RGRSSRTHSKSRL QEEE+RSRS+DADYGKRRRLTS+
Sbjct: 661 DRYSDHQRYRDREPEHEEEWDRGRSSRTHSKSRLSQEEENRSRSKDADYGKRRRLTSE 704

BLAST of MS002678.1 vs. TAIR 10
Match: AT5G55670.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 644.8 bits (1662), Expect = 8.0e-185
Identity = 434/751 (57.79%), Postives = 522/751 (69.51%), Query Frame = 0

Query: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADEGFLGEDE-DEYEDLYNDVNVGEGFLQSLRK 60
           MDEG+G      DQ+DQFH+NEAISAVAD+GF+ E+E D+YEDLYNDVNVGEGFLQS++K
Sbjct: 1   MDEGDGR-----DQMDQFHQNEAISAVADDGFMAEEEDDDYEDLYNDVNVGEGFLQSMKK 60

Query: 61  NDDLGFRNE-------EEPPKIEPPATLAPSSGASIPGVGGGATE---VASLGDGGHSVP 120
           ND+ G RNE       EE  ++EP    A  S  SIPG+ G + E    A  G GG    
Sbjct: 61  NDEAGSRNEEKEKVNMEEEDRVEPVLGEAEVS-ISIPGLVGESVEKEAEAESGGGGSGSG 120

Query: 121 ERV---TEGYNQIPDLRTNEMAMR--GGAGSGPPMGGGGGIRVELGQGS-KTNELEERSS 180
             V   + GY    +++ ++++    GG G+G     GGG+RVELGQ S + N+LE    
Sbjct: 121 TDVVVASSGYG-AQEVKVSDVSQEIPGGIGTGT----GGGLRVELGQASNRANDLEAPRG 180

Query: 181 NNVAVHQAPQQPQPQPQQQQQQQQQQQQPQQHHHQPLHSGVLGNPGSVENDGLLRQGGVN 240
           NN++     Q   P P            P   +++ L   V+GN     N G+    G N
Sbjct: 181 NNIS-----QGLLPPP------------PVLGNNENLMRPVMGN----VNGGIPPGPGSN 240

Query: 241 VNGVGGN----GYGNMGSAGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDE 300
           + G G N    G    G+ GGGGGG  LFVGDLHWWTTDAELE ELCKYG +KEVKFFDE
Sbjct: 241 MVGNGANIAMPGVVGGGTGGGGGGGAFLFVGDLHWWTTDAELEAELCKYGAVKEVKFFDE 300

Query: 301 KASGKSKGYCQVEFYDPSAATACKEGMNGHVFNGRPCVVAFASPFSVKKMGEAQVNRNQQ 360
           KASGKSKGYCQVEFYDP AA+ACK+ +NG+ FNGRPCVV +ASP+SVK+MGEAQVNR QQ
Sbjct: 301 KASGKSKGYCQVEFYDPVAASACKDALNGYPFNGRPCVVEYASPYSVKRMGEAQVNRTQQ 360

Query: 361 IAQAANPQARRG--------PNDAAGKIGGSNIQTGGNYQGGDNNRGSGRGNWGRGNAHG 420
            AQ+   QA+RG        P  A      +N   GGN+QGG+ NRG GRGNWGRGNA G
Sbjct: 361 -AQSVIAQAKRGGPADPPSKPLVANNNNNNNNNAIGGNFQGGE-NRGFGRGNWGRGNAQG 420

Query: 421 MGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQGIGATPPL-LHPQSMMGQGFDPSFGAPM 480
           MGGRGP GPMRNR  GMGGRG+MGNG  GFGQG+G  PP+ +  Q MMGQGF+ +FG PM
Sbjct: 421 MGGRGPGGPMRNRPNGMGGRGLMGNG--GFGQGMGTGPPMNMMHQPMMGQGFEQAFGGPM 480

Query: 481 GRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMAPSG 540
            RMG YGGFPGAP P F G+LSSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMM  +G
Sbjct: 481 ARMGGYGGFPGAPGPQFPGLLSSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPNAG 540

Query: 541 VD-GPNMGMWSDPSMGGWGS-EEHGGGRAGESSYGEEAGSDQQYGEGSHDRGGWANSAKE 600
           VD G NMGMW DP+ GGWG+ E+ G GRA ESSYGEEA SD QYGE +H+RG   N  KE
Sbjct: 541 VDGGHNMGMW-DPNSGGWGAGEDLGSGRAAESSYGEEAASDHQYGEVNHERGARPNPVKE 600

Query: 601 KDRGSERDWSQSSERRYRDD------RERSKEKDPGPDHDWQDRRPRDDRDVGRERDKD- 660
           K+R SER+WS SS+RR R+D      R+  +EKD G  +D  +RR RDDRD GRER+++ 
Sbjct: 601 KERASEREWSGSSDRRNREDKDAGYERDIPREKDVGHGYDMPERRHRDDRDTGREREREH 660

Query: 661 RDRDRERSRDYERGHDRDRDRDRDRDRHKEDRDRYSDHHRYRDR-EPEHEDEWERGRSSR 712
             +DRERSR+    H RDR+R+R+RDRH+E+R+RY   HR R R EPEH++EW RGRSSR
Sbjct: 661 HHKDRERSRE----HVRDRERERERDRHREERERYGGDHRTRHRDEPEHDEEWNRGRSSR 710

BLAST of MS002678.1 vs. TAIR 10
Match: AT5G55670.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 427.6 bits (1098), Expect = 2.0e-119
Identity = 341/748 (45.59%), Postives = 418/748 (55.88%), Query Frame = 0

Query: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADEGFLGEDE-DEYEDLYNDVNVGEGFLQSLRK 60
           MDEG+G      DQ+DQFH+NEAISAVAD+GF+ E+E D+YEDLYNDVNVGEGFLQS++K
Sbjct: 1   MDEGDGR-----DQMDQFHQNEAISAVADDGFMAEEEDDDYEDLYNDVNVGEGFLQSMKK 60

Query: 61  NDDLGFRNE-------EEPPKIEPPATLAPSSGASIPGVGGGATE---VASLGDGGHSVP 120
           ND+ G RNE       EE  ++EP    A  S  SIPG+ G + E    A  G GG    
Sbjct: 61  NDEAGSRNEEKEKVNMEEEDRVEPVLGEAEVS-ISIPGLVGESVEKEAEAESGGGGSGSG 120

Query: 121 ERV---TEGYNQIPDLRTNEMAMR--GGAGSGPPMGGGGGIRVELGQGS-KTNELEERSS 180
             V   + GY    +++ ++++    GG G+G     GGG+RVELGQ S + N+LE    
Sbjct: 121 TDVVVASSGYG-AQEVKVSDVSQEIPGGIGTGT----GGGLRVELGQASNRANDLEAPRG 180

Query: 181 NNVAVHQAPQQPQPQPQQQQQQQQQQQQPQQHHHQPLHSGVLGNPGSVENDGLLRQGGVN 240
           NN++     Q   P P            P   +++ L   V+GN     N G+    G N
Sbjct: 181 NNIS-----QGLLPPP------------PVLGNNENLMRPVMGN----VNGGIPPGPGSN 240

Query: 241 VNGVGGN----GYGNMGSAGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDE 300
           + G G N    G    G+ GGGGGG  LFVGDLHWWTTDAELE ELCKYG +KEVKFFDE
Sbjct: 241 MVGNGANIAMPGVVGGGTGGGGGGGAFLFVGDLHWWTTDAELEAELCKYGAVKEVKFFDE 300

Query: 301 KASGKSKGYCQVEFYDPSAATACKEGMNGHVFNGRPCVVAFASPFSVKKMGEAQVNRNQQ 360
           KASGKSKGYCQVEFYDP AA+ACK+ +NG+ FNGRPCVV +ASP+SVK+MGEAQVNR QQ
Sbjct: 301 KASGKSKGYCQVEFYDPVAASACKDALNGYPFNGRPCVVEYASPYSVKRMGEAQVNRTQQ 360

Query: 361 IAQAANPQARRG--------PNDAAGKIGGSNIQTGGNYQGGDNNRGSGRGNWGRGNAHG 420
            AQ+   QA+RG        P  A      +N   GGN+QGG+ NRG GRGNWGRGNA G
Sbjct: 361 -AQSVIAQAKRGGPADPPSKPLVANNNNNNNNNAIGGNFQGGE-NRGFGRGNWGRGNAQG 420

Query: 421 MGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMG 480
           MGGRGP GPMRNR  GM                                           
Sbjct: 421 MGGRGPGGPMRNRPNGM------------------------------------------- 480

Query: 481 RMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMAPSGV 540
                                                                       
Sbjct: 481 ------------------------------------------------------------ 540

Query: 541 DGPNMGMWSDPSMGGWGSEEHGGGRAGESSYGEEAGSDQQYGEGSHDRGGWANSAKEKDR 600
                                 GGRA ESSYGEEA SD QYGE +H+RG   N  KEK+R
Sbjct: 541 ----------------------GGRAAESSYGEEAASDHQYGEVNHERGARPNPVKEKER 585

Query: 601 GSERDWSQSSERRYRDD------RERSKEKDPGPDHDWQDRRPRDDRDVGRERDKD-RDR 660
            SER+WS SS+RR R+D      R+  +EKD G  +D  +RR RDDRD GRER+++   +
Sbjct: 601 ASEREWSGSSDRRNREDKDAGYERDIPREKDVGHGYDMPERRHRDDRDTGREREREHHHK 585

Query: 661 DRERSRDYERGHDRDRDRDRDRDRHKEDRDRYSDHHRYRDR-EPEHEDEWERGRSSRTHS 712
           DRERSR+    H RDR+R+R+RDRH+E+R+RY   HR R R EPEH++EW RGRSSR H+
Sbjct: 661 DRERSRE----HVRDRERERERDRHREERERYGGDHRTRHRDEPEHDEEWNRGRSSRGHN 585

BLAST of MS002678.1 vs. TAIR 10
Match: AT1G13190.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 229.6 bits (584), Expect = 8.1e-60
Identity = 256/713 (35.90%), Postives = 343/713 (48.11%), Query Frame = 0

Query: 24  ISAVADEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFRNEEEPPKIEPPATLA-- 83
           I A+ADE  +G D+DEY+DLY+DVNVGE F Q+          N+ +PP     +  +  
Sbjct: 21  IPALADEELMG-DDDEYDDLYSDVNVGESFFQA---------HNQPQPPAQVNTSNASLQ 80

Query: 84  --PSSGASIPGVG---GGATEVASLGDGGH---SVPERVTEGYNQIP---------DLRT 143
              S  A+ P +G   GG  E     DGGH   S P+  ++ Y Q           D+++
Sbjct: 81  AQNSHVAAEPRMGIVSGGTVEGKYRNDGGHNGISGPDTRSDVYPQASSFGAKGLNIDIQS 140

Query: 144 NEMAMRGGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAVHQAPQQPQPQPQQQQQ 203
           N++A +G         G  G  V + +              + VH +   P PQ  QQ  
Sbjct: 141 NKIAQQGSTTVVLNNHGFSGNAVNVPE--------------MPVHNSYGAP-PQGAQQIP 200

Query: 204 QQQQQQQPQ-QHHHQPLHSGVLGNPGSVENDGLLRQGGVNVNGVGGNGYGNMGSAGGGGG 263
             Q    P    +  P  S V+ N                                   G
Sbjct: 201 VSQMSVNPNVMMNKSPTQSFVVDN-----------------------------------G 260

Query: 264 GTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDPSAATACK 323
            T+LFVG+LHWWTTDAE+E  L +YG +KE+KFFDE+ SGKSKGYCQVEFYD +AA ACK
Sbjct: 261 NTMLFVGELHWWTTDAEIESVLSQYGRVKEIKFFDERVSGKSKGYCQVEFYDSAAAAACK 320

Query: 324 EGMNGHVFNGRPCVVAFASPFSVKKMGEAQVNRNQQIAQAANPQARRGPNDAAGKIGGSN 383
           EGMNG +FNG+ CVVAFASP ++K+MG     RNQ   Q  N   RR  N+  G+  G+N
Sbjct: 321 EGMNGFIFNGKACVVAFASPETLKQMGANFTGRNQGQNQIQN---RRPLNEGMGR--GNN 380

Query: 384 IQTGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGI----MGNGGN 443
                N Q GD  R  GRG + RG   GMG RG A      GG M GRG+     G+G  
Sbjct: 381 NNNNMNTQNGDGGRNYGRGGFARG-GQGMGNRGGAW-----GGAMRGRGVNNMASGSGAG 440

Query: 444 GFGQGIG--ATPPLLHPQSMMGQ-GFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPP 503
            +G G+   A   ++HPQ MMG  GFDP+F   MGR   YGG+ G   P   G+  S+P 
Sbjct: 441 PYGPGLAGPAFGGMMHPQGMMGAGGFDPTF---MGRGAGYGGYSGIAYP---GMPHSYPG 500

Query: 504 VGGVGLPGVAPHVNPAFFGRGMPMNGMGMMAPSGVDGPN-MGMWSDPSMGGWGSEEHGGG 563
           V  +G+ G+APHVNPAFFG      GMG M  SG++G +   MW         SE +GGG
Sbjct: 501 VNAMGMVGIAPHVNPAFFG-----TGMGTMGSSGMNGVHAAAMW---------SEANGGG 560

Query: 564 RAGESSYGEEAGSDQQYGEGSHDRGGWANSAKEKDRGSERDWSQSSERRYRDDRERSKEK 623
                  GEE GS+          GG+ +  +EK+    RD  +++  R           
Sbjct: 561 -------GEEGGSEY---------GGYEDETQEKEEKPSRDKERATTER----------- 571

Query: 624 DPGPDHDWQDRRPRDDRDVGRERDKDRDRDRERSRDYERGHDRDRDRDRDRDRHKEDRDR 683
                 DW                                   +   DR    H+E++D 
Sbjct: 621 ------DWS----------------------------------ENSGDRRHKSHREEKDS 571

Query: 684 YSDHHRYRDREPEHEDEWERGRSS-RTHSKSRLPQEEESRSRSRDADYGKRRR 708
           + ++ + RDR+    DE++RG+SS ++ S+SR+  E++ RSRSRDADYGKRRR
Sbjct: 681 HREYKQQRDRD---SDEFDRGQSSLKSRSRSRM-SEDDHRSRSRDADYGKRRR 571

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022139595.10.0e+0099.02cleavage and polyadenylation specificity factor subunit 6 [Momordica charantia][more]
XP_038897113.10.0e+0090.53uncharacterized PE-PGRS family protein PE_PGRS46-like [Benincasa hispida][more]
XP_023535463.10.0e+0089.76cleavage and polyadenylation specificity factor subunit 6-like [Cucurbita pepo s... [more]
XP_038897335.10.0e+0089.21cleavage and polyadenylation specificity factor subunit 6-like [Benincasa hispid... [more]
XP_022936014.10.0e+0089.24cleavage and polyadenylation specificity factor subunit CG7185-like [Cucurbita m... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1CCR10.0e+0099.02cleavage and polyadenylation specificity factor subunit 6 OS=Momordica charantia... [more]
A0A6J1F7260.0e+0089.24cleavage and polyadenylation specificity factor subunit CG7185-like OS=Cucurbita... [more]
A0A6J1ILS20.0e+0089.49cleavage and polyadenylation specificity factor subunit 6-like OS=Cucurbita maxi... [more]
A0A5D3CC600.0e+0088.15Cleavage and polyadenylation specificity factor subunit 6 OS=Cucumis melo var. m... [more]
A0A6J1ITV50.0e+0088.16cleavage and polyadenylation specificity factor subunit CG7185-like OS=Cucurbita... [more]
Match NameE-valueIdentityDescription
AT5G55670.18.0e-18557.79RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G55670.22.0e-11945.59RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT1G13190.18.1e-6035.90RNA-binding (RRM/RBD/RNP motifs) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 246..319
e-value: 1.2E-19
score: 81.3
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 247..316
e-value: 3.8E-13
score: 49.1
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 245..323
score: 13.344883
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 164..340
e-value: 1.5E-27
score: 98.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..200
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 359..382
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 514..711
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 561..711
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 342..407
NoneNo IPR availablePANTHERPTHR23204:SF9CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6-LIKEcoord: 1..711
NoneNo IPR availableCDDcd12372RRM_CFIm68_CFIm59coord: 247..320
e-value: 2.17008E-33
score: 120.863
IPR034772CPSF6/7 familyPANTHERPTHR23204CLEAVAGE AND POLYADENYLATION SPECIFIC FACTORcoord: 1..711
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 234..330

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MS002678MS002678gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MS002678.1-cdsMS002678.1-cds-scaffold928:240487..242619CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MS002678.1MS002678.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding