MS002273.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS002273.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	PTI1-like tyrosine-protein kinase At3g15890
Location	scaffold30: 3761447 .. 3761797 (-)
Sequence length	351
RNA-Seq Expression	MS002273.1
Synteny	MS002273.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAACTCGAGTGAAAGGAACCTTAGGATATCTTGCTCCCGAATACGCCATGTGGGGTAAGGTTTCAGAGAGTTGTGACGTTTTTAGTTATGGGATTCTTCTGCTAGAGCTCATGACAGGAAGAAAGCCAATAGAGAAACTTCCTGGCGGAGCAAAGAGAACCATTATTGATTGGGTTGACACAATGATAAACAAAGGCAGGTTCAAGGATTTAGCTGATCGTAAGCTAAAGGGACAGCTTAATTGGAAGCAGTTCGAGCACATAATCCATTTGGCAATCATGTGTGTGCATCAGGACCCAAATAAACGGCCTACCATAAAAGAGGTGGTGGAGAGTTTGAAAGGGTTGATG

mRNA sequence

ACAACTCGAGTGAAAGGAACCTTAGGATATCTTGCTCCCGAATACGCCATGTGGGGTAAGGTTTCAGAGAGTTGTGACGTTTTTAGTTATGGGATTCTTCTGCTAGAGCTCATGACAGGAAGAAAGCCAATAGAGAAACTTCCTGGCGGAGCAAAGAGAACCATTATTGATTGGGTTGACACAATGATAAACAAAGGCAGGTTCAAGGATTTAGCTGATCGTAAGCTAAAGGGACAGCTTAATTGGAAGCAGTTCGAGCACATAATCCATTTGGCAATCATGTGTGTGCATCAGGACCCAAATAAACGGCCTACCATAAAAGAGGTGGTGGAGAGTTTGAAAGGGTTGATG

Coding sequence (CDS)

ACAACTCGAGTGAAAGGAACCTTAGGATATCTTGCTCCCGAATACGCCATGTGGGGTAAGGTTTCAGAGAGTTGTGACGTTTTTAGTTATGGGATTCTTCTGCTAGAGCTCATGACAGGAAGAAAGCCAATAGAGAAACTTCCTGGCGGAGCAAAGAGAACCATTATTGATTGGGTTGACACAATGATAAACAAAGGCAGGTTCAAGGATTTAGCTGATCGTAAGCTAAAGGGACAGCTTAATTGGAAGCAGTTCGAGCACATAATCCATTTGGCAATCATGTGTGTGCATCAGGACCCAAATAAACGGCCTACCATAAAAGAGGTGGTGGAGAGTTTGAAAGGGTTGATG

Protein sequence

TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIEKLPGGAKRTIIDWVDTMINKGRFKDLADRKLKGQLNWKQFEHIIHLAIMCVHQDPNKRPTIKEVVESLKGLM

Homology

[Close]

BLAST of MS002273.1 vs. NCBI nr
Match: XP_022135413.1 (PTI1-like tyrosine-protein kinase At3g15890 [Momordica charantia])

HSP 1 Score: 247.3 bits (630), Expect = 6.6e-62
Identity = 116/117 (99.15%), Postives = 116/117 (99.15%), Query Frame = 0


Query: 1   TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIEKLPGGAKRTIIDWVD 60
           TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIEKLPGGAKRTIIDWVD
Sbjct: 200 TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIEKLPGGAKRTIIDWVD 259

Query: 61  TMINKGRFKDLADRKLKGQLNWKQFEHIIHLAIMCVHQDPNKRPTIKEVVESLKGLM 118
           TMINKGRFKDLADRKLKGQLNWKQFEHIIHLAIMCVHQDPNKRPTIKEVVESLKG M
Sbjct: 260 TMINKGRFKDLADRKLKGQLNWKQFEHIIHLAIMCVHQDPNKRPTIKEVVESLKGSM 316

[Close]

BLAST of MS002273.1 vs. NCBI nr
Match: KAG6589728.1 (PTI1-like tyrosine-protein kinase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 218.4 bits (555), Expect = 3.3e-53
Identity = 99/117 (84.62%), Postives = 109/117 (93.16%), Query Frame = 0


Query: 1   TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIEKLPGGAKRTIIDWVD 60
           TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLEL+TGRKPIE+LPGGAKRTI +W++
Sbjct: 198 TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELITGRKPIERLPGGAKRTISEWIN 257

Query: 61  TMINKGRFKDLADRKLKGQLNWKQFEHIIHLAIMCVHQDPNKRPTIKEVVESLKGLM 118
           T INK RFKDLADRKLKG LNWKQFEH++HLAIMCV  +P+KRPTI+EVVE LK LM
Sbjct: 258 TTINKDRFKDLADRKLKGHLNWKQFEHVLHLAIMCVQTEPDKRPTIREVVECLKALM 314

[Close]

BLAST of MS002273.1 vs. NCBI nr
Match: KAG7023405.1 (PTI1-like tyrosine-protein kinase, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 218.4 bits (555), Expect = 3.3e-53
Identity = 99/117 (84.62%), Postives = 109/117 (93.16%), Query Frame = 0


Query: 1   TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIEKLPGGAKRTIIDWVD 60
           TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLEL+TGRKPIE+LPGGAKRTI +W++
Sbjct: 198 TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELITGRKPIERLPGGAKRTISEWIN 257

Query: 61  TMINKGRFKDLADRKLKGQLNWKQFEHIIHLAIMCVHQDPNKRPTIKEVVESLKGLM 118
           T INK RFKDLADRKLKG LNWKQFEH++HLAIMCV  +P+KRPTI+EVVE LK LM
Sbjct: 258 TTINKDRFKDLADRKLKGHLNWKQFEHVLHLAIMCVQTEPDKRPTIREVVECLKALM 314

[Close]

BLAST of MS002273.1 vs. NCBI nr
Match: XP_022921375.1 (PTI1-like tyrosine-protein kinase At3g15890 [Cucurbita moschata])

HSP 1 Score: 218.4 bits (555), Expect = 3.3e-53
Identity = 99/117 (84.62%), Postives = 109/117 (93.16%), Query Frame = 0


Query: 1   TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIEKLPGGAKRTIIDWVD 60
           TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLEL+TGRKPIE+LPGGAKRTI +W++
Sbjct: 198 TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELITGRKPIERLPGGAKRTISEWIN 257

Query: 61  TMINKGRFKDLADRKLKGQLNWKQFEHIIHLAIMCVHQDPNKRPTIKEVVESLKGLM 118
           T INK RFKDLADRKLKG LNWKQFEH++HLAIMCV  +P+KRPTI+EVVE LK LM
Sbjct: 258 TTINKDRFKDLADRKLKGHLNWKQFEHVLHLAIMCVQTEPDKRPTIREVVECLKALM 314

[Close]

BLAST of MS002273.1 vs. NCBI nr
Match: XP_023516727.1 (PTI1-like tyrosine-protein kinase At3g15890 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 216.1 bits (549), Expect = 1.6e-52
Identity = 98/117 (83.76%), Postives = 108/117 (92.31%), Query Frame = 0


Query: 1   TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIEKLPGGAKRTIIDWVD 60
           TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLEL+TGRKPIE+LPGGAKRTI +W++
Sbjct: 198 TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELITGRKPIERLPGGAKRTISEWIN 257

Query: 61  TMINKGRFKDLADRKLKGQLNWKQFEHIIHLAIMCVHQDPNKRPTIKEVVESLKGLM 118
             INK RFKDLADRKLKG LNWKQFEH++HLAIMCV  +P+KRPTI+EVVE LK LM
Sbjct: 258 ITINKDRFKDLADRKLKGHLNWKQFEHVLHLAIMCVQTEPDKRPTIREVVECLKALM 314

[Close]

BLAST of MS002273.1 vs. ExPASy Swiss-Prot
Match: C0LGU5 (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana OX=3702 GN=At5g45780 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.2e-23
Identity = 49/118 (41.53%), Postives = 79/118 (66.95%), Query Frame = 0


Query: 1   TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIEKLPGGAKR-TIIDWV 60
           TT V+GT+G++APEY   G+ SE  DVF +G+L+LEL+TG K I++  G  ++  I+ WV
Sbjct: 459 TTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQGNGQVRKGMILSWV 518

Query: 61  DTMINKGRFKDLADRKLKGQLNWKQFEHIIHLAIMCVHQDPNKRPTIKEVVESLKGLM 118
            T+  + RF ++ DR LKG+ +    E ++ LA++C    PN RP + +V++ L+GL+
Sbjct: 519 RTLKAEKRFAEMVDRDLKGEFDDLVLEEVVELALLCTQPHPNLRPRMSQVLKVLEGLV 576

[Close]

BLAST of MS002273.1 vs. ExPASy Swiss-Prot
Match: Q9FHG4 (Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana OX=3702 GN=LECRKS7 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 6.9e-22
Identity = 43/114 (37.72%), Postives = 74/114 (64.91%), Query Frame = 0


Query: 1   TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIEKLPGGAKR-TIIDWV 60
           +T   GT+GYLAPEY  +G  +E  D FSYG+++LE+  GR+PI+K P   K   ++DWV
Sbjct: 526 STLTAGTMGYLAPEYLQYGTATEKTDAFSYGVVILEVACGRRPIDKEPESQKTVNLVDWV 585

Query: 61  DTMINKGRFKDLADRKLKGQLNWKQFEHIIHLAIMCVHQDPNKRPTIKEVVESL 114
             + ++GR  +  D +LKG+ + +  + ++ + + C H D N+RP+++ V++ L
Sbjct: 586 WRLHSEGRVLEAVDERLKGEFDEEMMKKLLLVGLKCAHPDSNERPSMRRVLQIL 639

[Close]

BLAST of MS002273.1 vs. ExPASy Swiss-Prot
Match: Q9ASQ6 (Probable LRR receptor-like serine/threonine-protein kinase At1g29720 OS=Arabidopsis thaliana OX=3702 GN=RFK1 PE=2 SV=3)

HSP 1 Score: 104.8 bits (260), Expect = 6.9e-22
Identity = 40/115 (34.78%), Postives = 77/115 (66.96%), Query Frame = 0


Query: 1   TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIEKLPGGAKRTIIDWVD 60
           +T+V GT+GY+APEYA+WG+++E  DV+S+G++ +E+++G+   ++       ++I+W  
Sbjct: 830 STKVAGTIGYMAPEYALWGQLTEKADVYSFGVVAMEIVSGKSNTKQQGNADSVSLINWAL 889

Query: 61  TMINKGRFKDLADRKLKGQLNWKQFEHIIHLAIMCVHQDPNKRPTIKEVVESLKG 116
           T+   G   ++ DR L+G+ N  +   +I +A++C +  P+ RPT+ E V+ L+G
Sbjct: 890 TLQQTGDILEIVDRMLEGEFNRSEAVRMIKVALVCTNSSPSLRPTMSEAVKMLEG 944

[Close]

BLAST of MS002273.1 vs. ExPASy Swiss-Prot
Match: Q9LV48 (Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana OX=3702 GN=PERK1 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 9.1e-22
Identity = 46/119 (38.66%), Postives = 76/119 (63.87%), Query Frame = 0


Query: 1   TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIEKLPGGAKRTIIDWVD 60
           +TRV GT GYLAPEYA  GK++E  DVFS+G++LLEL+TGR+P++        +++DW  
Sbjct: 437 STRVMGTFGYLAPEYAASGKLTEKSDVFSFGVVLLELITGRRPVDANNVYVDDSLVDWAR 496

Query: 61  TMINK----GRFKDLADRKLKGQLNWKQFEHIIHLAIMCVHQDPNKRPTIKEVVESLKG 116
            ++N+    G F+ LAD K+  + + ++   ++  A  CV     +RP + ++V +L+G
Sbjct: 497 PLLNRASEEGDFEGLADSKMGNEYDREEMARMVACAAACVRHSARRRPRMSQIVRALEG 555

[Close]

BLAST of MS002273.1 vs. ExPASy Swiss-Prot
Match: Q8RWW0 (Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana OX=3702 GN=ALE2 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.2e-21
Identity = 47/115 (40.87%), Postives = 72/115 (62.61%), Query Frame = 0


Query: 1   TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIEKLPGGAKRTIIDWVD 60
           +TRV GT GY+APEYAM G +    DV+SYG++LLEL+TGR+P++      +  ++ W  
Sbjct: 503 STRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRRPVDMSQPSGEENLVTWAR 562

Query: 61  TMI-NKGRFKDLADRKLKGQLNWKQFEHIIHLAIMCVHQDPNKRPTIKEVVESLK 115
            ++ N+   + L D  L G  N+     +  +A MCVHQ+ + RP + EVV++LK
Sbjct: 563 PLLANREGLEQLVDPALAGTYNFDDMAKVAAIASMCVHQEVSHRPFMGEVVQALK 617

[Close]

BLAST of MS002273.1 vs. ExPASy TrEMBL
Match: A0A6J1C4R2 (PTI1-like tyrosine-protein kinase At3g15890 OS=Momordica charantia OX=3673 GN=LOC111007371 PE=3 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 3.2e-62
Identity = 116/117 (99.15%), Postives = 116/117 (99.15%), Query Frame = 0


Query: 1   TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIEKLPGGAKRTIIDWVD 60
           TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIEKLPGGAKRTIIDWVD
Sbjct: 200 TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIEKLPGGAKRTIIDWVD 259

Query: 61  TMINKGRFKDLADRKLKGQLNWKQFEHIIHLAIMCVHQDPNKRPTIKEVVESLKGLM 118
           TMINKGRFKDLADRKLKGQLNWKQFEHIIHLAIMCVHQDPNKRPTIKEVVESLKG M
Sbjct: 260 TMINKGRFKDLADRKLKGQLNWKQFEHIIHLAIMCVHQDPNKRPTIKEVVESLKGSM 316

[Close]

BLAST of MS002273.1 vs. ExPASy TrEMBL
Match: A0A6J1E5G5 (PTI1-like tyrosine-protein kinase At3g15890 OS=Cucurbita moschata OX=3662 GN=LOC111429664 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.6e-53
Identity = 99/117 (84.62%), Postives = 109/117 (93.16%), Query Frame = 0


Query: 1   TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIEKLPGGAKRTIIDWVD 60
           TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLEL+TGRKPIE+LPGGAKRTI +W++
Sbjct: 198 TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELITGRKPIERLPGGAKRTISEWIN 257

Query: 61  TMINKGRFKDLADRKLKGQLNWKQFEHIIHLAIMCVHQDPNKRPTIKEVVESLKGLM 118
           T INK RFKDLADRKLKG LNWKQFEH++HLAIMCV  +P+KRPTI+EVVE LK LM
Sbjct: 258 TTINKDRFKDLADRKLKGHLNWKQFEHVLHLAIMCVQTEPDKRPTIREVVECLKALM 314

[Close]

BLAST of MS002273.1 vs. ExPASy TrEMBL
Match: A0A6J1JMI5 (PTI1-like tyrosine-protein kinase At3g15890 OS=Cucurbita maxima OX=3661 GN=LOC111485734 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 6.7e-52
Identity = 95/117 (81.20%), Postives = 107/117 (91.45%), Query Frame = 0


Query: 1   TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIEKLPGGAKRTIIDWVD 60
           TTRVKGTLGYLAPEYAMWGKVSESCD+FSYGILLLEL+TGRKPIE+LPGGAKRTI +W+ 
Sbjct: 198 TTRVKGTLGYLAPEYAMWGKVSESCDIFSYGILLLELITGRKPIERLPGGAKRTISEWIS 257

Query: 61  TMINKGRFKDLADRKLKGQLNWKQFEHIIHLAIMCVHQDPNKRPTIKEVVESLKGLM 118
             INK RFKDLADRKLKG LNWKQF+H++HLAIMCV  +P+KRPTI+EVV+ LK LM
Sbjct: 258 ITINKDRFKDLADRKLKGHLNWKQFDHVLHLAIMCVQTEPDKRPTIREVVDCLKALM 314

[Close]

BLAST of MS002273.1 vs. ExPASy TrEMBL
Match: A0A5D3CBW6 (PTI1-like tyrosine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G00750 PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 8.7e-52
Identity = 98/117 (83.76%), Postives = 107/117 (91.45%), Query Frame = 0


Query: 1   TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIEKLPGGAKRTIIDWVD 60
           TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIE+LPGGAKRTI +WV+
Sbjct: 222 TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIERLPGGAKRTISEWVN 281

Query: 61  TMINKGRFKDLADRKLKGQLNWKQFEHIIHLAIMCVHQDPNKRPTIKEVVESLKGLM 118
             INK RFKDLAD+KLKGQLNWK+FE ++HLAIMCV  +  KRPTIK+VVE LKGLM
Sbjct: 282 MTINKDRFKDLADKKLKGQLNWKEFEQVMHLAIMCVQTEAEKRPTIKQVVEILKGLM 338

[Close]

BLAST of MS002273.1 vs. ExPASy TrEMBL
Match: A0A5A7VE42 (PTI1-like tyrosine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold117G00060 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 8.7e-52
Identity = 98/117 (83.76%), Postives = 107/117 (91.45%), Query Frame = 0


Query: 1   TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIEKLPGGAKRTIIDWVD 60
           TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIE+LPGGAKRTI +WV+
Sbjct: 198 TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIERLPGGAKRTISEWVN 257

Query: 61  TMINKGRFKDLADRKLKGQLNWKQFEHIIHLAIMCVHQDPNKRPTIKEVVESLKGLM 118
             INK RFKDLAD+KLKGQLNWK+FE ++HLAIMCV  +  KRPTIK+VVE LKGLM
Sbjct: 258 MTINKDRFKDLADKKLKGQLNWKEFEQVMHLAIMCVQTEAEKRPTIKQVVEILKGLM 314

[Close]

BLAST of MS002273.1 vs. TAIR 10
Match: AT5G45780.1 (Leucine-rich repeat protein kinase family protein )

HSP 1 Score: 109.8 bits (273), Expect = 1.5e-24
Identity = 49/118 (41.53%), Postives = 79/118 (66.95%), Query Frame = 0


Query: 1   TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIEKLPGGAKR-TIIDWV 60
           TT V+GT+G++APEY   G+ SE  DVF +G+L+LEL+TG K I++  G  ++  I+ WV
Sbjct: 459 TTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQGNGQVRKGMILSWV 518

Query: 61  DTMINKGRFKDLADRKLKGQLNWKQFEHIIHLAIMCVHQDPNKRPTIKEVVESLKGLM 118
            T+  + RF ++ DR LKG+ +    E ++ LA++C    PN RP + +V++ L+GL+
Sbjct: 519 RTLKAEKRFAEMVDRDLKGEFDDLVLEEVVELALLCTQPHPNLRPRMSQVLKVLEGLV 576

[Close]

BLAST of MS002273.1 vs. TAIR 10
Match: AT4G02010.1 (Protein kinase superfamily protein )

HSP 1 Score: 105.9 bits (263), Expect = 2.2e-23
Identity = 48/115 (41.74%), Postives = 76/115 (66.09%), Query Frame = 0


Query: 1   TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIEKLPGGAKRTIIDWVD 60
           +TRV GT GY+APEYAM G +    DV+SYG++LLEL+TGRKP++      +  ++ W  
Sbjct: 542 STRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWTR 601

Query: 61  TMI-NKGRFKDLADRKLKGQLNWKQFEHIIHLAIMCVHQDPNKRPTIKEVVESLK 115
            ++ +K R ++L D +L+G+   + F  +  +A  CV  + ++RPT+ EVV+SLK
Sbjct: 602 PVLRDKDRLEELVDSRLEGKYPKEDFIRVCTIAAACVAPEASQRPTMGEVVQSLK 656

[Close]

BLAST of MS002273.1 vs. TAIR 10
Match: AT1G29720.1 (Leucine-rich repeat transmembrane protein kinase )

HSP 1 Score: 104.8 bits (260), Expect = 4.9e-23
Identity = 40/115 (34.78%), Postives = 77/115 (66.96%), Query Frame = 0


Query: 1   TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIEKLPGGAKRTIIDWVD 60
           +T+V GT+GY+APEYA+WG+++E  DV+S+G++ +E+++G+   ++       ++I+W  
Sbjct: 830 STKVAGTIGYMAPEYALWGQLTEKADVYSFGVVAMEIVSGKSNTKQQGNADSVSLINWAL 889

Query: 61  TMINKGRFKDLADRKLKGQLNWKQFEHIIHLAIMCVHQDPNKRPTIKEVVESLKG 116
           T+   G   ++ DR L+G+ N  +   +I +A++C +  P+ RPT+ E V+ L+G
Sbjct: 890 TLQQTGDILEIVDRMLEGEFNRSEAVRMIKVALVCTNSSPSLRPTMSEAVKMLEG 944

[Close]

BLAST of MS002273.1 vs. TAIR 10
Match: AT5G55830.1 (Concanavalin A-like lectin protein kinase family protein )

HSP 1 Score: 104.8 bits (260), Expect = 4.9e-23
Identity = 43/114 (37.72%), Postives = 74/114 (64.91%), Query Frame = 0


Query: 1   TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIEKLPGGAKR-TIIDWV 60
           +T   GT+GYLAPEY  +G  +E  D FSYG+++LE+  GR+PI+K P   K   ++DWV
Sbjct: 526 STLTAGTMGYLAPEYLQYGTATEKTDAFSYGVVILEVACGRRPIDKEPESQKTVNLVDWV 585

Query: 61  DTMINKGRFKDLADRKLKGQLNWKQFEHIIHLAIMCVHQDPNKRPTIKEVVESL 114
             + ++GR  +  D +LKG+ + +  + ++ + + C H D N+RP+++ V++ L
Sbjct: 586 WRLHSEGRVLEAVDERLKGEFDEEMMKKLLLVGLKCAHPDSNERPSMRRVLQIL 639

[Close]

BLAST of MS002273.1 vs. TAIR 10
Match: AT3G24550.1 (proline extensin-like receptor kinase 1 )

HSP 1 Score: 104.4 bits (259), Expect = 6.4e-23
Identity = 46/119 (38.66%), Postives = 76/119 (63.87%), Query Frame = 0


Query: 1   TTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIEKLPGGAKRTIIDWVD 60
           +TRV GT GYLAPEYA  GK++E  DVFS+G++LLEL+TGR+P++        +++DW  
Sbjct: 437 STRVMGTFGYLAPEYAASGKLTEKSDVFSFGVVLLELITGRRPVDANNVYVDDSLVDWAR 496

Query: 61  TMINK----GRFKDLADRKLKGQLNWKQFEHIIHLAIMCVHQDPNKRPTIKEVVESLKG 116
            ++N+    G F+ LAD K+  + + ++   ++  A  CV     +RP + ++V +L+G
Sbjct: 497 PLLNRASEEGDFEGLADSKMGNEYDREEMARMVACAAACVRHSARRRPRMSQIVRALEG 555

The following BLAST results are available for this feature:

BLAST of MS002273.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135413.1	6.6e-62	99.15	PTI1-like tyrosine-protein kinase At3g15890 [Momordica charantia]	[more]
KAG6589728.1	3.3e-53	84.62	PTI1-like tyrosine-protein kinase, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7023405.1	3.3e-53	84.62	PTI1-like tyrosine-protein kinase, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022921375.1	3.3e-53	84.62	PTI1-like tyrosine-protein kinase At3g15890 [Cucurbita moschata]	[more]
XP_023516727.1	1.6e-52	83.76	PTI1-like tyrosine-protein kinase At3g15890 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS002273.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C0LGU5	2.2e-23	41.53	Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidop...	[more]
Q9FHG4	6.9e-22	37.72	Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thal...	[more]
Q9ASQ6	6.9e-22	34.78	Probable LRR receptor-like serine/threonine-protein kinase At1g29720 OS=Arabidop...	[more]
Q9LV48	9.1e-22	38.66	Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8RWW0	1.2e-21	40.87	Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana OX=37...	[more]

BLAST of MS002273.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C4R2	3.2e-62	99.15	PTI1-like tyrosine-protein kinase At3g15890 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1E5G5	1.6e-53	84.62	PTI1-like tyrosine-protein kinase At3g15890 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1JMI5	6.7e-52	81.20	PTI1-like tyrosine-protein kinase At3g15890 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A5D3CBW6	8.7e-52	83.76	PTI1-like tyrosine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7VE42	8.7e-52	83.76	PTI1-like tyrosine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of MS002273.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45780.1	1.5e-24	41.53	Leucine-rich repeat protein kinase family protein	[more]
AT4G02010.1	2.2e-23	41.74	Protein kinase superfamily protein	[more]
AT1G29720.1	4.9e-23	34.78	Leucine-rich repeat transmembrane protein kinase	[more]
AT5G55830.1	4.9e-23	37.72	Concanavalin A-like lectin protein kinase family protein	[more]
AT3G24550.1	6.4e-23	38.66	proline extensin-like receptor kinase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.510.10	Transferase(Phosphotransferase) domain 1	coord: 1..117 e-value: 3.9E-32 score: 113.2
None	No IPR available	PANTHER	PTHR47989:SF20	PTI1-LIKE TYROSINE-PROTEIN KINASE	coord: 1..116
None	No IPR available	PANTHER	PTHR47989	OS01G0750732 PROTEIN	coord: 1..116
IPR000719	Protein kinase domain	PFAM	PF00069	Pkinase	coord: 2..111 e-value: 2.8E-13 score: 49.8
IPR000719	Protein kinase domain	PROSITE	PS50011	PROTEIN_KINASE_DOM	coord: 1..117 score: 13.050642
IPR011009	Protein kinase-like domain superfamily	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 1..111

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS002273	MS002273	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS002273.1-cds	MS002273.1-cds-scaffold30:3761447..3761797	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS002273.1	MS002273.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity