MS002261.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS002261.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	F-box protein PP2-B10-like
Location	scaffold30: 3676806 .. 3678841 (+)
Sequence length	873
RNA-Seq Expression	MS002261.1
Synteny	MS002261.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGGCAACGGAGGGCGAAGAAATTGCCGATTTCTCTTTGCTGCCCGAAGGAGTAATAGCTAACATCTTGTCGCTGACGACTCCACCGGATGCGTGCAGGTCATCGGAGGTTTCCTGGACTTTCCATGCCGCGGCGCAATCAGATATCGTGTGGGACAGATTCCTGCCTACCGATTGGCACGATTTGGTTTCTCGGGCTAAACCTAGCGATCTGAATTTTGATCCGGCTTCGTCTTCGAAGAAGGAGATCTTTTTCTCTCTCTGCGACAGACCACTGCTCATTGATGACGGCAAAAAGGTATGCTTTCCGTTTCCCCCAATTTCTCTCAATTGAAGGTGCCCACAGTTGGATACGTGGTTTTCCGCCGTGCCATTACTGGAAGTCCCTTTCTTGTCATGATGGCCTTTCAAATTCATTCTTTAGCTGTGATGTGATCTTGGAGGCCCCATTTTACTCTTTTTCTAATGTAACGATGATATTGTTTACTTTAGATTTTACCTTCACGTCTAATTTTAGAATATAAAATTCTTTTCGAAACACATGCTAAACCCTAATTTTTTAATTTTTAAGTCCTCTTTTACCCTAGTTAAGTAAGGATTCTAATAACAAAACTTTTGAGGTTACCTGGGATTTCAACAAAAATGTTTGAAACTATCTTTAAAAAGGTTGATATGCATTCCTATAAATGGTTGATATCCGAAATCCAATTTCCTTTATTCTCGTTGAGGAGGGGTGAAGTTTCAGTAACTTTTGATATCGCCAAAAGCAAGCAAGCGCTAGTTGGCATATATCTACGAACTCAGTTTGATCCCCTGCCCACATGTTGAACTATAAAAAAAAAAAAAAAAACTTTTGATATGCTCTGGACCAGAGTTTCTCTTTTCTGTTTTGCTTCTCTCTCTCTTTTTTTTTTTTAACTTCTTCCACAATTCATCATACAACTGGGTAGCAATCAGGTAACATCTCAAATTTGCACAAGGGCTTTAACTTTTTCTCATAAACTTGTAATCGAGTTAATGGGTCTAAACGTTCAGATTTATTAATTTCTCTTTGAATTAAATACAATATTATCGTTCCTGCCTTAAATTATATGTTTAGTTTCTATGCTTCAACTTTGTTCTTAATAACATGAACTGGGTGTGAAGAAGTTTTGGAGTGAGGGGGTTGAGTAAGTTTTGAAGAATGAATATTATTTGATTGTATATACATACACTTATAGTAGTCTGATTCACGAATAACATAAAACCACTGGTTCATATATATGTGTGTGTTTTGTTGCTTGTTGTATCAGCGATGAAACTGTTCTGCCCTTTCTATTTGTATGCACATAAATTGAGTGGGTTCAATCATTGGTATGTAACAGAGCTTTTCACTGGACAAACGGAGTGGTAAGAAATGCATAATGCTTGGAGCAAGGGACCTTTCAGTCGTTTGGGGTGATACCTCTTTCTATTGGACCTGGGAACGTCATCCCGAGTCGAGGTTCGAGTCTATGACATTGGATCAAATCCTATCCTCTATGCTGCTTCTTTTTCTTCCAATTCTAATACTTTCCTTTTAATGTGGGTGTGGGAATCAGGTTTGCAGAGGTAGCTGTGCTCCTCGAGGTGTGGTGGCTTGAAATACGTGGAAGAATAAGTTGCAGAATGTTGTCTCCTGCAACAACTTATGCAGCTTACTTTGTGTTCAAGATGAGGAAACGAAGATACTATGGGTTCAATGTTGATCCTGCGGATGCCATGGTGGGAACTGGTGGCACTGAAAACAGGTCGAAAAGTGTTTGTCTGGACCCTTTTATTGACAACCCTCGTCGGCGGCGTCGGCATGTCCCATTGGCGGTGGACCAGCCGCCTGAAAGTATGGAGGGGTCAGAGCGGCCAAAGCAGAGACATGATGGCTGGTTTGAAATCGAGCTGGGAGAGTTTCAAAGCGACAGTGGAGATGATGAAATTGAGATGGTTCTTATGGAGGTAAAGGGCAACACTCCCAAGAGCGGCCTTGTTGTTCAAGGGATAGAGATAAGGCCTAAAATAAGC

mRNA sequence

ACGGCAACGGAGGGCGAAGAAATTGCCGATTTCTCTTTGCTGCCCGAAGGAGTAATAGCTAACATCTTGTCGCTGACGACTCCACCGGATGCGTGCAGGTCATCGGAGGTTTCCTGGACTTTCCATGCCGCGGCGCAATCAGATATCGTGTGGGACAGATTCCTGCCTACCGATTGGCACGATTTGGTTTCTCGGGCTAAACCTAGCGATCTGAATTTTGATCCGGCTTCGTCTTCGAAGAAGGAGATCTTTTTCTCTCTCTGCGACAGACCACTGCTCATTGATGACGGCAAAAAGAGCTTTTCACTGGACAAACGGAGTGGTAAGAAATGCATAATGCTTGGAGCAAGGGACCTTTCAGTCGTTTGGGGTGATACCTCTTTCTATTGGACCTGGGAACGTCATCCCGAGTCGAGGTTTGCAGAGGTAGCTGTGCTCCTCGAGGTGTGGTGGCTTGAAATACGTGGAAGAATAAGTTGCAGAATGTTGTCTCCTGCAACAACTTATGCAGCTTACTTTGTGTTCAAGATGAGGAAACGAAGATACTATGGGTTCAATGTTGATCCTGCGGATGCCATGGTGGGAACTGGTGGCACTGAAAACAGGTCGAAAAGTGTTTGTCTGGACCCTTTTATTGACAACCCTCGTCGGCGGCGTCGGCATGTCCCATTGGCGGTGGACCAGCCGCCTGAAAGTATGGAGGGGTCAGAGCGGCCAAAGCAGAGACATGATGGCTGGTTTGAAATCGAGCTGGGAGAGTTTCAAAGCGACAGTGGAGATGATGAAATTGAGATGGTTCTTATGGAGGTAAAGGGCAACACTCCCAAGAGCGGCCTTGTTGTTCAAGGGATAGAGATAAGGCCTAAAATAAGC

Coding sequence (CDS)

ACGGCAACGGAGGGCGAAGAAATTGCCGATTTCTCTTTGCTGCCCGAAGGAGTAATAGCTAACATCTTGTCGCTGACGACTCCACCGGATGCGTGCAGGTCATCGGAGGTTTCCTGGACTTTCCATGCCGCGGCGCAATCAGATATCGTGTGGGACAGATTCCTGCCTACCGATTGGCACGATTTGGTTTCTCGGGCTAAACCTAGCGATCTGAATTTTGATCCGGCTTCGTCTTCGAAGAAGGAGATCTTTTTCTCTCTCTGCGACAGACCACTGCTCATTGATGACGGCAAAAAGAGCTTTTCACTGGACAAACGGAGTGGTAAGAAATGCATAATGCTTGGAGCAAGGGACCTTTCAGTCGTTTGGGGTGATACCTCTTTCTATTGGACCTGGGAACGTCATCCCGAGTCGAGGTTTGCAGAGGTAGCTGTGCTCCTCGAGGTGTGGTGGCTTGAAATACGTGGAAGAATAAGTTGCAGAATGTTGTCTCCTGCAACAACTTATGCAGCTTACTTTGTGTTCAAGATGAGGAAACGAAGATACTATGGGTTCAATGTTGATCCTGCGGATGCCATGGTGGGAACTGGTGGCACTGAAAACAGGTCGAAAAGTGTTTGTCTGGACCCTTTTATTGACAACCCTCGTCGGCGGCGTCGGCATGTCCCATTGGCGGTGGACCAGCCGCCTGAAAGTATGGAGGGGTCAGAGCGGCCAAAGCAGAGACATGATGGCTGGTTTGAAATCGAGCTGGGAGAGTTTCAAAGCGACAGTGGAGATGATGAAATTGAGATGGTTCTTATGGAGGTAAAGGGCAACACTCCCAAGAGCGGCCTTGTTGTTCAAGGGATAGAGATAAGGCCTAAAATAAGC

Protein sequence

TATEGEEIADFSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSDIVWDRFLPTDWHDLVSRAKPSDLNFDPASSSKKEIFFSLCDRPLLIDDGKKSFSLDKRSGKKCIMLGARDLSVVWGDTSFYWTWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAYFVFKMRKRRYYGFNVDPADAMVGTGGTENRSKSVCLDPFIDNPRRRRRHVPLAVDQPPESMEGSERPKQRHDGWFEIELGEFQSDSGDDEIEMVLMEVKGNTPKSGLVVQGIEIRPKIS

Homology

[Close]

BLAST of MS002261.1 vs. NCBI nr
Match: XP_022135496.1 (F-box protein PP2-B10-like [Momordica charantia])

HSP 1 Score: 599.4 bits (1544), Expect = 1.7e-167
Identity = 289/291 (99.31%), Postives = 289/291 (99.31%), Query Frame = 0


Query: 1   TATEGEEIADFSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSDIVWDRFLPTDWH 60
           TATEGEEI DFSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSDIVWDRFLPTDWH
Sbjct: 13  TATEGEEIDDFSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSDIVWDRFLPTDWH 72

Query: 61  DLVSRAKPSDLNFDPASSSKKEIFFSLCDRPLLIDDGKKSFSLDKRSGKKCIMLGARDLS 120
           DLVSRAKPSDLNFDPASSSKKEIFFSLCDRPLLIDDGKKSFSLDKRSGKKCIMLGARDLS
Sbjct: 73  DLVSRAKPSDLNFDPASSSKKEIFFSLCDRPLLIDDGKKSFSLDKRSGKKCIMLGARDLS 132

Query: 121 VVWGDTSFYWTWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAYFVFKMRKR 180
           VVWGDTSFYWTWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAYFVFKMRKR
Sbjct: 133 VVWGDTSFYWTWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAYFVFKMRKR 192

Query: 181 RYYGFNVDPADAMVGTGGTENRSKSVCLDPFIDNPRRRRRHVPLAVDQPPESMEGSERPK 240
           RYYGFNVDPADAMVGTGGTENRSKSVCLDPFIDNP RRRRHVPLAVDQPPESMEGSERPK
Sbjct: 193 RYYGFNVDPADAMVGTGGTENRSKSVCLDPFIDNPLRRRRHVPLAVDQPPESMEGSERPK 252

Query: 241 QRHDGWFEIELGEFQSDSGDDEIEMVLMEVKGNTPKSGLVVQGIEIRPKIS 292
           QRHDGWFEIELGEFQSDSGDDEIEMVLMEVKGNTPKSGLVVQGIEIRPKIS
Sbjct: 253 QRHDGWFEIELGEFQSDSGDDEIEMVLMEVKGNTPKSGLVVQGIEIRPKIS 303

[Close]

BLAST of MS002261.1 vs. NCBI nr
Match: XP_038878468.1 (F-box protein PP2-B10-like [Benincasa hispida])

HSP 1 Score: 468.4 bits (1204), Expect = 4.5e-128
Identity = 223/289 (77.16%), Postives = 248/289 (85.81%), Query Frame = 0


Query: 3   TEGEEIADFSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSDIVWDRFLPTDWHDL 62
           TEGEEI+DFS LPEGV+A ILSLTTP DACRSS VS TFHAAAQSDIVWD+ LPTDW  L
Sbjct: 10  TEGEEISDFSSLPEGVVAKILSLTTPSDACRSSAVSRTFHAAAQSDIVWDKLLPTDWKLL 69

Query: 63  VSRAKPSDLNFDPASSSKKEIFFSLCDRPLLIDDGKKSFSLDKRSGKKCIMLGARDLSVV 122
           +SR KPS+LNFDP SS KKEIFFSLC+ PLLIDDG KS SL+K SGKKCIMLGARDLS+V
Sbjct: 70  ISRRKPSNLNFDPISSPKKEIFFSLCESPLLIDDGNKSLSLEKWSGKKCIMLGARDLSIV 129

Query: 123 WGDTSFYWTWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAYFVFKMRKRRY 182
           WGDTS+YW+WE H +SRFAEVAVLL+VWWLEIRGRISCRMLSP TTYAAYFVFKMR+RRY
Sbjct: 130 WGDTSYYWSWEHHTDSRFAEVAVLLDVWWLEIRGRISCRMLSPKTTYAAYFVFKMRQRRY 189

Query: 183 YGFNVDPADAMVGTGGTENRSKSVCLDPFIDNPRRRRRHVPLAVDQPPESMEGSERPKQR 242
           YGFN++PADA VG  GTE   KSVCLDP++DNP+RRRRH P  +    E M G E P +R
Sbjct: 190 YGFNINPADATVGILGTEPHRKSVCLDPYLDNPQRRRRHAPWMMRPQSEDMAGLEWPPER 249

Query: 243 HDGWFEIELGEFQSDSGDDEIEMVLMEVKGNTPKSGLVVQGIEIRPKIS 292
           HDGWFEIELGEF+S  GDDE+EM LMEVKG++ KSGLVV+GIEIRPK S
Sbjct: 250 HDGWFEIELGEFESGDGDDEVEMALMEVKGSSAKSGLVVEGIEIRPKPS 298

[Close]

BLAST of MS002261.1 vs. NCBI nr
Match: XP_022134922.1 (F-box protein PP2-B10-like isoform X2 [Momordica charantia])

HSP 1 Score: 462.2 bits (1188), Expect = 3.2e-126
Identity = 223/292 (76.37%), Postives = 247/292 (84.59%), Query Frame = 0


Query: 1   TATEGEEIADFSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSDIVWDRFLPTDWH 60
           T TEGEEIADFS LPEGVIANILSLT P DACRSS VS  FHAAAQSDIVWDRFLPTDW+
Sbjct: 7   TGTEGEEIADFSSLPEGVIANILSLTGPSDACRSSTVSRAFHAAAQSDIVWDRFLPTDWY 66

Query: 61  DLVSRAKPSDLNFDPASSSKKEIFFSLCDRPLLIDDGKK-SFSLDKRSGKKCIMLGARDL 120
           DL+ R KPSDLN DP SSSKKEIFFSLCD PLL DDGKK SFSLDK SGKKCIMLGARDL
Sbjct: 67  DLICRRKPSDLNIDPISSSKKEIFFSLCDNPLLTDDGKKLSFSLDKWSGKKCIMLGARDL 126

Query: 121 SVVWGDTSFYWTWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAYFVFKMRK 180
           S+VWGDTS YWTWE HPESRFAEV V+L+VWWLEIRG+IS  MLSPATTYAAYFVF+MR+
Sbjct: 127 SIVWGDTSVYWTWESHPESRFAEVVVILKVWWLEIRGKISSGMLSPATTYAAYFVFRMRE 186

Query: 181 RRYYGFNVDPADAMVGTGGTENRSKSVCLDPFIDNPRRRRRHVPLAVDQPPESMEGSERP 240
           RRYYGFN+DP DAMVG  G+E   KSVCLDP++D+P +RRR VP A +  PE+M G E+P
Sbjct: 187 RRYYGFNIDPVDAMVGIVGSEYCMKSVCLDPYLDDPHQRRRRVPRAGNNLPENMSGLEQP 246

Query: 241 KQRHDGWFEIELGEFQSDSGDDEIEMVLMEVKGNTPKSGLVVQGIEIRPKIS 292
           ++R DGWFE ELGEF  D GDDE+EM+L EVK N  K  LVVQGI+IRPK++
Sbjct: 247 RERDDGWFETELGEFHIDGGDDEVEMILKEVKCNDSKRVLVVQGIQIRPKVN 298

[Close]

BLAST of MS002261.1 vs. NCBI nr
Match: XP_022134921.1 (F-box protein PP2-B10-like isoform X1 [Momordica charantia])

HSP 1 Score: 462.2 bits (1188), Expect = 3.2e-126
Identity = 223/292 (76.37%), Postives = 247/292 (84.59%), Query Frame = 0


Query: 1   TATEGEEIADFSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSDIVWDRFLPTDWH 60
           T TEGEEIADFS LPEGVIANILSLT P DACRSS VS  FHAAAQSDIVWDRFLPTDW+
Sbjct: 27  TGTEGEEIADFSSLPEGVIANILSLTGPSDACRSSTVSRAFHAAAQSDIVWDRFLPTDWY 86

Query: 61  DLVSRAKPSDLNFDPASSSKKEIFFSLCDRPLLIDDGKK-SFSLDKRSGKKCIMLGARDL 120
           DL+ R KPSDLN DP SSSKKEIFFSLCD PLL DDGKK SFSLDK SGKKCIMLGARDL
Sbjct: 87  DLICRRKPSDLNIDPISSSKKEIFFSLCDNPLLTDDGKKLSFSLDKWSGKKCIMLGARDL 146

Query: 121 SVVWGDTSFYWTWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAYFVFKMRK 180
           S+VWGDTS YWTWE HPESRFAEV V+L+VWWLEIRG+IS  MLSPATTYAAYFVF+MR+
Sbjct: 147 SIVWGDTSVYWTWESHPESRFAEVVVILKVWWLEIRGKISSGMLSPATTYAAYFVFRMRE 206

Query: 181 RRYYGFNVDPADAMVGTGGTENRSKSVCLDPFIDNPRRRRRHVPLAVDQPPESMEGSERP 240
           RRYYGFN+DP DAMVG  G+E   KSVCLDP++D+P +RRR VP A +  PE+M G E+P
Sbjct: 207 RRYYGFNIDPVDAMVGIVGSEYCMKSVCLDPYLDDPHQRRRRVPRAGNNLPENMSGLEQP 266

Query: 241 KQRHDGWFEIELGEFQSDSGDDEIEMVLMEVKGNTPKSGLVVQGIEIRPKIS 292
           ++R DGWFE ELGEF  D GDDE+EM+L EVK N  K  LVVQGI+IRPK++
Sbjct: 267 RERDDGWFETELGEFHIDGGDDEVEMILKEVKCNDSKRVLVVQGIQIRPKVN 318

[Close]

BLAST of MS002261.1 vs. NCBI nr
Match: XP_038880064.1 (F-box protein PP2-B10-like [Benincasa hispida])

HSP 1 Score: 442.6 bits (1137), Expect = 2.7e-120
Identity = 213/290 (73.45%), Postives = 238/290 (82.07%), Query Frame = 0


Query: 2   ATEGEEIADFSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSDIVWDRFLPTDWHD 61
           A EGEEI+DFS LPEGV+A ILSLTTPPDACRSS VS TFHAAAQSDIVW+ FLPTDW  
Sbjct: 10  AMEGEEISDFSSLPEGVVAKILSLTTPPDACRSSAVSRTFHAAAQSDIVWNEFLPTDWEL 69

Query: 62  LVSRAKPSDLNFDPASSSKKEIFFSLCDRPLLIDDGKKSFSLDKRSGKKCIMLGARDLSV 121
           L+SR KP  + FDP SS KK+IFFSLC  P+LIDDG KS SL+K SGKK IMLGARDLSV
Sbjct: 70  LISRRKPGKIKFDPISSPKKDIFFSLCYNPVLIDDGNKSLSLEKWSGKKRIMLGARDLSV 129

Query: 122 VWGDTSFYWTWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAYFVFKMRKRR 181
           VWGDTS YWTWE   ESRFAEVAVL+ VWWLEIRGRISCRMLSP TTYA YFVF MR+  
Sbjct: 130 VWGDTSGYWTWEHRLESRFAEVAVLVNVWWLEIRGRISCRMLSPKTTYAVYFVFNMRRCY 189

Query: 182 YYGFNVDPADAMVGTGGTENRSKSVCLDPFIDNPRRRRRHVPLAVDQPPESMEGSERPKQ 241
           YYGF++DPADA VG  GTEN  +SVCLDP++DNP+ RRRH P  +    E M G ERP++
Sbjct: 190 YYGFDIDPADATVGILGTENHRRSVCLDPYLDNPQGRRRHAPWMMRPQSEGMSGLERPQK 249

Query: 242 RHDGWFEIELGEFQSDSGDDEIEMVLMEVKGNTPKSGLVVQGIEIRPKIS 292
           RHDGWFEIELGEF+S  GDDE+EM L E+KG++ KSGLVV+GIEIRPK S
Sbjct: 250 RHDGWFEIELGEFESGDGDDEVEMALKELKGSSDKSGLVVEGIEIRPKPS 299

[Close]

BLAST of MS002261.1 vs. ExPASy Swiss-Prot
Match: Q9ZVQ6 (F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.6e-62
Identity = 132/285 (46.32%), Postives = 173/285 (60.70%), Query Frame = 0


Query: 7   EIADFSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSDIVWDRFLPTDWHDLVSRA 66
           E + F   PE  I+ I+S T P DAC ++ VS TF +  +SDI+W++FLP D+  L+  +
Sbjct: 10  ESSPFDSFPEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESLIPPS 69

Query: 67  KPSDLNFDPASSSKKEIFFSLCDRPLLIDDGKKSFSLDKRSGKKCIMLGARDLSVVWGDT 126
           +          SSKKE++FSLC+ P+L DD KKS  L+K SGK+C+ML A +LS++WGD 
Sbjct: 70  R--------VFSSKKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIWGDN 129

Query: 127 SFYWTWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAYFVFKMRKRRYYGFN 186
             YW W   PESRF +VA L +V W EIRGR + R+LSP T Y+AY VFK    + YGF 
Sbjct: 130 PQYWQWIPIPESRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAYIVFK-GVDKCYGFQ 189

Query: 187 VDPADAMVGTGGTENRSKSVCLDPFIDNPRRRRRHVPLAVDQPPESMEGSERPKQRHDGW 246
               +A VG  G E   + +C   F +  RR RR+V               +PKQR DGW
Sbjct: 190 NVAIEAAVGVVGQEPSRRLIC---FSEAIRRGRRNV--------------VKPKQREDGW 249

Query: 247 FEIELGEFQSDSG---DDEIEMVLMEVKGNTPKSGLVVQGIEIRP 289
            EIELGEF +D G   +DEIEM  +E K    K GL++QGIEIRP
Sbjct: 250 MEIELGEFFNDGGIMDNDEIEMSALETKQLNRKCGLIIQGIEIRP 268

[Close]

BLAST of MS002261.1 vs. ExPASy Swiss-Prot
Match: Q3E6P4 (F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 3.4e-62
Identity = 126/278 (45.32%), Postives = 172/278 (61.87%), Query Frame = 0


Query: 11  FSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSDIVWDRFLPTDWHDLVSRAKPSD 70
           F +LPE  I+NI+S T+P DAC ++ VS TF +A  SD VWD+FLP ++  LVSR++   
Sbjct: 61  FDVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRSR--- 120

Query: 71  LNFDPASSSKKEIFFSLCDRPLLIDDGKKSFSLDKRSGKKCIMLGARDLSVVWGDTSFYW 130
                  +SKKE++F+LC  P+LI+DGKKSF L+K SGK+CIML +++L + WG +  YW
Sbjct: 121 -----VFASKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEYW 180

Query: 131 TWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAYFVFKMRKRRYYGFNVDPA 190
            W   PESRF ++A LL+V W EIRG+ S R+LSP T Y+AY VFK  K R  G    P 
Sbjct: 181 QWISIPESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAYIVFK-TKDRCPGLGHLPV 240

Query: 191 DAMVGTGGTENRSKSVCLDPFIDNPRRRRRHVPLAVDQPPESMEGSERPKQRHDGWFEIE 250
           +  +G  G E+  + +    +   PR RR                  +P QR DGW E E
Sbjct: 241 EVGLGLVGQESSKRFI----YFIGPRDRRGR---------RETRDVTKPDQREDGWMEAE 300

Query: 251 LGEFQSDSGDDEIEMVLMEVKGNTPKSGLVVQGIEIRP 289
           LGEF ++   DEIE  ++E+K  + KSGL++QGIE RP
Sbjct: 301 LGEFFNEERCDEIEFSVIEIKSPSWKSGLIIQGIEFRP 316

[Close]

BLAST of MS002261.1 vs. ExPASy Swiss-Prot
Match: Q6NPT8 (F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.0e-58
Identity = 129/312 (41.35%), Postives = 175/312 (56.09%), Query Frame = 0


Query: 11  FSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSDIVWDRFLPTDWHDLVSRAKPSD 70
           F  LPE  I+ ++S T+P DAC  + VS +  +AAQSD+VW+ FLP+++  LV ++    
Sbjct: 32  FDALPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVLQS---- 91

Query: 71  LNFDPASSSKKEIFFSLCDRPLLIDDGKKSFSLDKRSGKKCIMLGARDLSVVWGDTSFYW 130
                   SKKEIF SL D  +L+++GKKSF ++K SGKKC ML A +L+++WGD+  YW
Sbjct: 92  ----ANHLSKKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGDSPAYW 151

Query: 131 TWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAYFVFKMRKRRYYGFNVDPA 190
            W   PES+F +VA L  V W E+RG+ISC MLS  T Y+ Y VFK    R YGF++ P 
Sbjct: 152 KWITVPESKFEKVAELRNVCWFEVRGKISCGMLSKGTHYSVYVVFKTANGRSYGFDLVPV 211

Query: 191 DAMVGTGGTENRSKSVCLD------------------PFIDNPRRRRRHVPLAVDQPPES 250
           +A VG  G     KSV  +                    +    R RR       +  E 
Sbjct: 212 EAGVGFVGKVATKKSVYFESGNADSRSATSHYSGISYAMVSRAFRMRRPWMQVQREEEEE 271

Query: 251 MEGSER-------PKQRHDGWFEIELGEFQ------SDSGDDEIEMVLMEVKGNTPKSGL 292
           +EG          PK+R DGW E+ELG+F        D G DEIE+ +ME +    KSGL
Sbjct: 272 VEGERERGMNVVGPKERVDGWSEVELGKFYINNGGCGDDGSDEIEISIMETQNGNWKSGL 331

[Close]

BLAST of MS002261.1 vs. ExPASy Swiss-Prot
Match: Q9ZVQ8 (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 4.4e-57
Identity = 119/287 (41.46%), Postives = 178/287 (62.02%), Query Frame = 0


Query: 8   IADFSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSDIVWDRFLPTDWHDLVSRAK 67
           +A+   LPE  ++ I+S T+P DAC  + VS TF +A +SDIVW++F+P ++  L+S+++
Sbjct: 33  VAELDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSR 92

Query: 68  PSDLNFDPASSSKKEIFFSLCDRPLLIDDGKKSFSLDKRSGKKCIMLGARDLSVVWGDTS 127
                      SKKE++F+LCD+ +LIDDGKKS  ++K + K+CIM+ A +L++ WG++ 
Sbjct: 93  AFKF------LSKKELYFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNSP 152

Query: 128 FYWTWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAYFVFKMRKRRYYGFNV 187
             W W   P++RF  VA LLEV   EIRGRI+ R++SP T Y+AY V+K +    YGF  
Sbjct: 153 QSWRWIPDPQARFETVAELLEVCLFEIRGRINSRVISPKTRYSAYIVYK-KLNICYGFEN 212

Query: 188 DPADAMVGTGG---TENRSKSVCLDPFIDNPRRRRRHVPLAVDQPPESMEGSERPKQRHD 247
              + +VG  G    E+  + +C D  +D   RRR           +  +   +P++R D
Sbjct: 213 VAVEVVVGVVGQDLEESCRRYICFDETMDEQFRRR-----------DRGKNLVKPERRKD 272

Query: 248 GWFEIELGEFQSDSG---DDEIEMVLMEVKGNTPKSGLVVQGIEIRP 289
           GW EI++GEF ++ G   DDEIEMV +E K    K GL++QGIEIRP
Sbjct: 273 GWMEIKIGEFFNEGGLLNDDEIEMVALEAKQRHWKRGLIIQGIEIRP 301

[Close]

BLAST of MS002261.1 vs. ExPASy Swiss-Prot
Match: Q9ZVR5 (Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2)

HSP 1 Score: 211.8 bits (538), Expect = 1.0e-53
Identity = 115/279 (41.22%), Postives = 161/279 (57.71%), Query Frame = 0


Query: 11  FSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSDIVWDRFLPTDWHDLVSRAKPSD 70
           F  LPE  I+NI+S T+P DAC ++ VS TF +A  SD VWD+FLP+D+  LV  ++   
Sbjct: 47  FDNLPEDCISNIISFTSPRDACVAASVSKTFESAVNSDSVWDKFLPSDYSSLVPPSR--- 106

Query: 71  LNFDPASSSKKEIFFSLCDRPLLIDDGKKSFSLDKRSGKKCIMLG-ARDLSVVWGDTSFY 130
                  SSKKE++F++CD P+L++DG KSF L+K +GKKC ML   + + + W  T  Y
Sbjct: 107 -----VFSSKKELYFAICDNPVLVEDGGKSFWLEKENGKKCFMLSPKKSMWITWVSTPQY 166

Query: 131 WTWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAYFVFKMRKRRYYGFNVDP 190
           W W   PE+RF EV  LL V W E+RG ++ + LSP T Y+AY VFK  K         P
Sbjct: 167 WRWISIPEARFEEVPELLNVCWFEVRGGMNTKELSPGTRYSAYIVFK-TKNGCPNLGDVP 226

Query: 191 ADAMVGTGGTENRSKSVCLDPFIDNPRRRRRHVPLAVDQPPESMEGSERPKQRHDGWFEI 250
            +A VG  G E+  + +    +   P  +RR                 RP +R DGW E 
Sbjct: 227 VEATVGLVGQESSQRHI----YFVGPSDQRR---------DRETRDVTRPTKRKDGWMEA 286

Query: 251 ELGEFQSDSGDDEIEMVLMEVKGNTPKSGLVVQGIEIRP 289
           ELG+F ++SG D ++  ++E+K    K GL++QGIE RP
Sbjct: 287 ELGQFFNESGCDVVDTSILEIKTPYWKRGLIIQGIEFRP 303

[Close]

BLAST of MS002261.1 vs. ExPASy TrEMBL
Match: A0A6J1C0X7 (F-box protein PP2-B10-like OS=Momordica charantia OX=3673 GN=LOC111007437 PE=4 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 8.2e-168
Identity = 289/291 (99.31%), Postives = 289/291 (99.31%), Query Frame = 0


Query: 1   TATEGEEIADFSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSDIVWDRFLPTDWH 60
           TATEGEEI DFSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSDIVWDRFLPTDWH
Sbjct: 13  TATEGEEIDDFSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSDIVWDRFLPTDWH 72

Query: 61  DLVSRAKPSDLNFDPASSSKKEIFFSLCDRPLLIDDGKKSFSLDKRSGKKCIMLGARDLS 120
           DLVSRAKPSDLNFDPASSSKKEIFFSLCDRPLLIDDGKKSFSLDKRSGKKCIMLGARDLS
Sbjct: 73  DLVSRAKPSDLNFDPASSSKKEIFFSLCDRPLLIDDGKKSFSLDKRSGKKCIMLGARDLS 132

Query: 121 VVWGDTSFYWTWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAYFVFKMRKR 180
           VVWGDTSFYWTWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAYFVFKMRKR
Sbjct: 133 VVWGDTSFYWTWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAYFVFKMRKR 192

Query: 181 RYYGFNVDPADAMVGTGGTENRSKSVCLDPFIDNPRRRRRHVPLAVDQPPESMEGSERPK 240
           RYYGFNVDPADAMVGTGGTENRSKSVCLDPFIDNP RRRRHVPLAVDQPPESMEGSERPK
Sbjct: 193 RYYGFNVDPADAMVGTGGTENRSKSVCLDPFIDNPLRRRRHVPLAVDQPPESMEGSERPK 252

Query: 241 QRHDGWFEIELGEFQSDSGDDEIEMVLMEVKGNTPKSGLVVQGIEIRPKIS 292
           QRHDGWFEIELGEFQSDSGDDEIEMVLMEVKGNTPKSGLVVQGIEIRPKIS
Sbjct: 253 QRHDGWFEIELGEFQSDSGDDEIEMVLMEVKGNTPKSGLVVQGIEIRPKIS 303

[Close]

BLAST of MS002261.1 vs. ExPASy TrEMBL
Match: A0A6J1BZ47 (F-box protein PP2-B10-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007056 PE=4 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 1.6e-126
Identity = 223/292 (76.37%), Postives = 247/292 (84.59%), Query Frame = 0


Query: 1   TATEGEEIADFSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSDIVWDRFLPTDWH 60
           T TEGEEIADFS LPEGVIANILSLT P DACRSS VS  FHAAAQSDIVWDRFLPTDW+
Sbjct: 27  TGTEGEEIADFSSLPEGVIANILSLTGPSDACRSSTVSRAFHAAAQSDIVWDRFLPTDWY 86

Query: 61  DLVSRAKPSDLNFDPASSSKKEIFFSLCDRPLLIDDGKK-SFSLDKRSGKKCIMLGARDL 120
           DL+ R KPSDLN DP SSSKKEIFFSLCD PLL DDGKK SFSLDK SGKKCIMLGARDL
Sbjct: 87  DLICRRKPSDLNIDPISSSKKEIFFSLCDNPLLTDDGKKLSFSLDKWSGKKCIMLGARDL 146

Query: 121 SVVWGDTSFYWTWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAYFVFKMRK 180
           S+VWGDTS YWTWE HPESRFAEV V+L+VWWLEIRG+IS  MLSPATTYAAYFVF+MR+
Sbjct: 147 SIVWGDTSVYWTWESHPESRFAEVVVILKVWWLEIRGKISSGMLSPATTYAAYFVFRMRE 206

Query: 181 RRYYGFNVDPADAMVGTGGTENRSKSVCLDPFIDNPRRRRRHVPLAVDQPPESMEGSERP 240
           RRYYGFN+DP DAMVG  G+E   KSVCLDP++D+P +RRR VP A +  PE+M G E+P
Sbjct: 207 RRYYGFNIDPVDAMVGIVGSEYCMKSVCLDPYLDDPHQRRRRVPRAGNNLPENMSGLEQP 266

Query: 241 KQRHDGWFEIELGEFQSDSGDDEIEMVLMEVKGNTPKSGLVVQGIEIRPKIS 292
           ++R DGWFE ELGEF  D GDDE+EM+L EVK N  K  LVVQGI+IRPK++
Sbjct: 267 RERDDGWFETELGEFHIDGGDDEVEMILKEVKCNDSKRVLVVQGIQIRPKVN 318

[Close]

BLAST of MS002261.1 vs. ExPASy TrEMBL
Match: A0A6J1C117 (F-box protein PP2-B10-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007056 PE=4 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 1.6e-126
Identity = 223/292 (76.37%), Postives = 247/292 (84.59%), Query Frame = 0


Query: 1   TATEGEEIADFSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSDIVWDRFLPTDWH 60
           T TEGEEIADFS LPEGVIANILSLT P DACRSS VS  FHAAAQSDIVWDRFLPTDW+
Sbjct: 7   TGTEGEEIADFSSLPEGVIANILSLTGPSDACRSSTVSRAFHAAAQSDIVWDRFLPTDWY 66

Query: 61  DLVSRAKPSDLNFDPASSSKKEIFFSLCDRPLLIDDGKK-SFSLDKRSGKKCIMLGARDL 120
           DL+ R KPSDLN DP SSSKKEIFFSLCD PLL DDGKK SFSLDK SGKKCIMLGARDL
Sbjct: 67  DLICRRKPSDLNIDPISSSKKEIFFSLCDNPLLTDDGKKLSFSLDKWSGKKCIMLGARDL 126

Query: 121 SVVWGDTSFYWTWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAYFVFKMRK 180
           S+VWGDTS YWTWE HPESRFAEV V+L+VWWLEIRG+IS  MLSPATTYAAYFVF+MR+
Sbjct: 127 SIVWGDTSVYWTWESHPESRFAEVVVILKVWWLEIRGKISSGMLSPATTYAAYFVFRMRE 186

Query: 181 RRYYGFNVDPADAMVGTGGTENRSKSVCLDPFIDNPRRRRRHVPLAVDQPPESMEGSERP 240
           RRYYGFN+DP DAMVG  G+E   KSVCLDP++D+P +RRR VP A +  PE+M G E+P
Sbjct: 187 RRYYGFNIDPVDAMVGIVGSEYCMKSVCLDPYLDDPHQRRRRVPRAGNNLPENMSGLEQP 246

Query: 241 KQRHDGWFEIELGEFQSDSGDDEIEMVLMEVKGNTPKSGLVVQGIEIRPKIS 292
           ++R DGWFE ELGEF  D GDDE+EM+L EVK N  K  LVVQGI+IRPK++
Sbjct: 247 RERDDGWFETELGEFHIDGGDDEVEMILKEVKCNDSKRVLVVQGIQIRPKVN 298

[Close]

BLAST of MS002261.1 vs. ExPASy TrEMBL
Match: A0A6J1ES31 (F-box protein PP2-B10-like OS=Cucurbita moschata OX=3662 GN=LOC111436000 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 4.3e-116
Identity = 204/291 (70.10%), Postives = 237/291 (81.44%), Query Frame = 0


Query: 1   TATEGEEIADFSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSDIVWDRFLPTDWH 60
           T TE  EIADFS LPEG IANILSLTTP DACRSS VS TFHAAA SDIVW+RFLPTDW 
Sbjct: 8   TGTEDGEIADFSSLPEGAIANILSLTTPSDACRSSAVSRTFHAAALSDIVWERFLPTDWE 67

Query: 61  DLVSRAKPSDLNFDPASSSKKEIFFSLCDRPLLIDDGKKSFSLDKRSGKKCIMLGARDLS 120
           DL+SR KP+DLNFDP + S KEIFFSLC+ PLLIDDG  S SLDKRSGKKC+MLGAR+LS
Sbjct: 68  DLISRRKPNDLNFDPITWSTKEIFFSLCNNPLLIDDGYTSISLDKRSGKKCVMLGARELS 127

Query: 121 VVWGDTSFYWTWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAYFVFKMRKR 180
           +VWGDTS YW WE HPESRF EV V+ +VWWLEIRG+IS RMLSPATTY AYFVF+ R+R
Sbjct: 128 IVWGDTSVYWAWESHPESRFTEVLVIFKVWWLEIRGKISSRMLSPATTYVAYFVFRTRER 187

Query: 181 RYYGFNVDPADAMVGTGGTENRSKSVCLDPFIDNPRRRRRHVPLAVDQPPESMEGSERPK 240
           RY+GFN+DP DAMVG  G+E+  KSVCLDP+ DNP +R R VP A      ++   E+P+
Sbjct: 188 RYFGFNIDPIDAMVGIVGSEHYMKSVCLDPYFDNPHQRGRRVPRA----GCNLSRLEQPR 247

Query: 241 QRHDGWFEIELGEFQSDSGDDEIEMVLMEVKGNTPKSGLVVQGIEIRPKIS 292
           +RHDGWFE ELGEF+ D GDDE+E++L +VK    +SGLVVQGIE+RPK++
Sbjct: 248 ERHDGWFETELGEFRIDGGDDEVEIILKKVKCIDSRSGLVVQGIEMRPKMN 294

[Close]

BLAST of MS002261.1 vs. ExPASy TrEMBL
Match: A0A6J1KK45 (F-box protein PP2-B10-like OS=Cucurbita maxima OX=3661 GN=LOC111495993 PE=4 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 5.8e-113
Identity = 199/291 (68.38%), Postives = 235/291 (80.76%), Query Frame = 0


Query: 1   TATEGEEIADFSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSDIVWDRFLPTDWH 60
           T TE  EIADFS LPEG IANILSLTTP DACRSS VS  FHAAAQSDIVW+RFLPT+W 
Sbjct: 8   TGTEDGEIADFSSLPEGAIANILSLTTPSDACRSSAVSRIFHAAAQSDIVWERFLPTNWE 67

Query: 61  DLVSRAKPSDLNFDPASSSKKEIFFSLCDRPLLIDDGKKSFSLDKRSGKKCIMLGARDLS 120
           DL+SR KP+DLNFDP + S KEIFFSLC+ PLLIDDG  S SLDKRSGKK +MLGAR+LS
Sbjct: 68  DLISRRKPNDLNFDPTTWSTKEIFFSLCNNPLLIDDGYTSISLDKRSGKKYVMLGARELS 127

Query: 121 VVWGDTSFYWTWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAYFVFKMRKR 180
           +VWGDTS YW WE HPESRF EV V+ + WWLEIRG+IS RMLSPATTY AYFVF+ R+R
Sbjct: 128 IVWGDTSVYWAWESHPESRFTEVLVIFKAWWLEIRGKISSRMLSPATTYVAYFVFRTRER 187

Query: 181 RYYGFNVDPADAMVGTGGTENRSKSVCLDPFIDNPRRRRRHVPLAVDQPPESMEGSERPK 240
           RY+GFN+DP DAMVG  G+E+  KSVCLDP+ D+P +R R VP A      ++   E+P+
Sbjct: 188 RYFGFNIDPVDAMVGIVGSEHYMKSVCLDPYFDHPHQRGRRVPRA----GCNVSRLEQPR 247

Query: 241 QRHDGWFEIELGEFQSDSGDDEIEMVLMEVKGNTPKSGLVVQGIEIRPKIS 292
           +RHDGWFE ELGEF+ D GD+E+E++L +VK    +SGLVVQGI+IRPK++
Sbjct: 248 ERHDGWFETELGEFRIDGGDEEVEIILKKVKCIDSRSGLVVQGIDIRPKMN 294

[Close]

BLAST of MS002261.1 vs. TAIR 10
Match: AT2G02360.1 (phloem protein 2-B10 )

HSP 1 Score: 240.4 bits (612), Expect = 1.9e-63
Identity = 132/285 (46.32%), Postives = 173/285 (60.70%), Query Frame = 0


Query: 7   EIADFSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSDIVWDRFLPTDWHDLVSRA 66
           E + F   PE  I+ I+S T P DAC ++ VS TF +  +SDI+W++FLP D+  L+  +
Sbjct: 10  ESSPFDSFPEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESLIPPS 69

Query: 67  KPSDLNFDPASSSKKEIFFSLCDRPLLIDDGKKSFSLDKRSGKKCIMLGARDLSVVWGDT 126
           +          SSKKE++FSLC+ P+L DD KKS  L+K SGK+C+ML A +LS++WGD 
Sbjct: 70  R--------VFSSKKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIWGDN 129

Query: 127 SFYWTWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAYFVFKMRKRRYYGFN 186
             YW W   PESRF +VA L +V W EIRGR + R+LSP T Y+AY VFK    + YGF 
Sbjct: 130 PQYWQWIPIPESRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAYIVFK-GVDKCYGFQ 189

Query: 187 VDPADAMVGTGGTENRSKSVCLDPFIDNPRRRRRHVPLAVDQPPESMEGSERPKQRHDGW 246
               +A VG  G E   + +C   F +  RR RR+V               +PKQR DGW
Sbjct: 190 NVAIEAAVGVVGQEPSRRLIC---FSEAIRRGRRNV--------------VKPKQREDGW 249

Query: 247 FEIELGEFQSDSG---DDEIEMVLMEVKGNTPKSGLVVQGIEIRP 289
            EIELGEF +D G   +DEIEM  +E K    K GL++QGIEIRP
Sbjct: 250 MEIELGEFFNDGGIMDNDEIEMSALETKQLNRKCGLIIQGIEIRP 268

[Close]

BLAST of MS002261.1 vs. TAIR 10
Match: AT2G02240.1 (F-box family protein )

HSP 1 Score: 240.0 bits (611), Expect = 2.4e-63
Identity = 126/278 (45.32%), Postives = 172/278 (61.87%), Query Frame = 0


Query: 11  FSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSDIVWDRFLPTDWHDLVSRAKPSD 70
           F +LPE  I+NI+S T+P DAC ++ VS TF +A  SD VWD+FLP ++  LVSR++   
Sbjct: 61  FDVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRSR--- 120

Query: 71  LNFDPASSSKKEIFFSLCDRPLLIDDGKKSFSLDKRSGKKCIMLGARDLSVVWGDTSFYW 130
                  +SKKE++F+LC  P+LI+DGKKSF L+K SGK+CIML +++L + WG +  YW
Sbjct: 121 -----VFASKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEYW 180

Query: 131 TWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAYFVFKMRKRRYYGFNVDPA 190
            W   PESRF ++A LL+V W EIRG+ S R+LSP T Y+AY VFK  K R  G    P 
Sbjct: 181 QWISIPESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAYIVFK-TKDRCPGLGHLPV 240

Query: 191 DAMVGTGGTENRSKSVCLDPFIDNPRRRRRHVPLAVDQPPESMEGSERPKQRHDGWFEIE 250
           +  +G  G E+  + +    +   PR RR                  +P QR DGW E E
Sbjct: 241 EVGLGLVGQESSKRFI----YFIGPRDRRGR---------RETRDVTKPDQREDGWMEAE 300

Query: 251 LGEFQSDSGDDEIEMVLMEVKGNTPKSGLVVQGIEIRP 289
           LGEF ++   DEIE  ++E+K  + KSGL++QGIE RP
Sbjct: 301 LGEFFNEERCDEIEFSVIEIKSPSWKSGLIIQGIEFRP 316

[Close]

BLAST of MS002261.1 vs. TAIR 10
Match: AT2G02230.1 (phloem protein 2-B1 )

HSP 1 Score: 228.4 bits (581), Expect = 7.4e-60
Identity = 129/312 (41.35%), Postives = 175/312 (56.09%), Query Frame = 0


Query: 11  FSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSDIVWDRFLPTDWHDLVSRAKPSD 70
           F  LPE  I+ ++S T+P DAC  + VS +  +AAQSD+VW+ FLP+++  LV ++    
Sbjct: 32  FDALPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVLQS---- 91

Query: 71  LNFDPASSSKKEIFFSLCDRPLLIDDGKKSFSLDKRSGKKCIMLGARDLSVVWGDTSFYW 130
                   SKKEIF SL D  +L+++GKKSF ++K SGKKC ML A +L+++WGD+  YW
Sbjct: 92  ----ANHLSKKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGDSPAYW 151

Query: 131 TWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAYFVFKMRKRRYYGFNVDPA 190
            W   PES+F +VA L  V W E+RG+ISC MLS  T Y+ Y VFK    R YGF++ P 
Sbjct: 152 KWITVPESKFEKVAELRNVCWFEVRGKISCGMLSKGTHYSVYVVFKTANGRSYGFDLVPV 211

Query: 191 DAMVGTGGTENRSKSVCLD------------------PFIDNPRRRRRHVPLAVDQPPES 250
           +A VG  G     KSV  +                    +    R RR       +  E 
Sbjct: 212 EAGVGFVGKVATKKSVYFESGNADSRSATSHYSGISYAMVSRAFRMRRPWMQVQREEEEE 271

Query: 251 MEGSER-------PKQRHDGWFEIELGEFQ------SDSGDDEIEMVLMEVKGNTPKSGL 292
           +EG          PK+R DGW E+ELG+F        D G DEIE+ +ME +    KSGL
Sbjct: 272 VEGERERGMNVVGPKERVDGWSEVELGKFYINNGGCGDDGSDEIEISIMETQNGNWKSGL 331

[Close]

BLAST of MS002261.1 vs. TAIR 10
Match: AT2G02340.1 (phloem protein 2-B8 )

HSP 1 Score: 223.0 bits (567), Expect = 3.1e-58
Identity = 119/287 (41.46%), Postives = 178/287 (62.02%), Query Frame = 0


Query: 8   IADFSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSDIVWDRFLPTDWHDLVSRAK 67
           +A+   LPE  ++ I+S T+P DAC  + VS TF +A +SDIVW++F+P ++  L+S+++
Sbjct: 33  VAELDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSR 92

Query: 68  PSDLNFDPASSSKKEIFFSLCDRPLLIDDGKKSFSLDKRSGKKCIMLGARDLSVVWGDTS 127
                      SKKE++F+LCD+ +LIDDGKKS  ++K + K+CIM+ A +L++ WG++ 
Sbjct: 93  AFKF------LSKKELYFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNSP 152

Query: 128 FYWTWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAYFVFKMRKRRYYGFNV 187
             W W   P++RF  VA LLEV   EIRGRI+ R++SP T Y+AY V+K +    YGF  
Sbjct: 153 QSWRWIPDPQARFETVAELLEVCLFEIRGRINSRVISPKTRYSAYIVYK-KLNICYGFEN 212

Query: 188 DPADAMVGTGG---TENRSKSVCLDPFIDNPRRRRRHVPLAVDQPPESMEGSERPKQRHD 247
              + +VG  G    E+  + +C D  +D   RRR           +  +   +P++R D
Sbjct: 213 VAVEVVVGVVGQDLEESCRRYICFDETMDEQFRRR-----------DRGKNLVKPERRKD 272

Query: 248 GWFEIELGEFQSDSG---DDEIEMVLMEVKGNTPKSGLVVQGIEIRP 289
           GW EI++GEF ++ G   DDEIEMV +E K    K GL++QGIEIRP
Sbjct: 273 GWMEIKIGEFFNEGGLLNDDEIEMVALEAKQRHWKRGLIIQGIEIRP 301

[Close]

BLAST of MS002261.1 vs. TAIR 10
Match: AT2G02250.1 (phloem protein 2-B2 )

HSP 1 Score: 211.8 bits (538), Expect = 7.1e-55
Identity = 115/279 (41.22%), Postives = 161/279 (57.71%), Query Frame = 0


Query: 11  FSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSDIVWDRFLPTDWHDLVSRAKPSD 70
           F  LPE  I+NI+S T+P DAC ++ VS TF +A  SD VWD+FLP+D+  LV  ++   
Sbjct: 47  FDNLPEDCISNIISFTSPRDACVAASVSKTFESAVNSDSVWDKFLPSDYSSLVPPSR--- 106

Query: 71  LNFDPASSSKKEIFFSLCDRPLLIDDGKKSFSLDKRSGKKCIMLG-ARDLSVVWGDTSFY 130
                  SSKKE++F++CD P+L++DG KSF L+K +GKKC ML   + + + W  T  Y
Sbjct: 107 -----VFSSKKELYFAICDNPVLVEDGGKSFWLEKENGKKCFMLSPKKSMWITWVSTPQY 166

Query: 131 WTWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAYFVFKMRKRRYYGFNVDP 190
           W W   PE+RF EV  LL V W E+RG ++ + LSP T Y+AY VFK  K         P
Sbjct: 167 WRWISIPEARFEEVPELLNVCWFEVRGGMNTKELSPGTRYSAYIVFK-TKNGCPNLGDVP 226

Query: 191 ADAMVGTGGTENRSKSVCLDPFIDNPRRRRRHVPLAVDQPPESMEGSERPKQRHDGWFEI 250
            +A VG  G E+  + +    +   P  +RR                 RP +R DGW E 
Sbjct: 227 VEATVGLVGQESSQRHI----YFVGPSDQRR---------DRETRDVTRPTKRKDGWMEA 286

Query: 251 ELGEFQSDSGDDEIEMVLMEVKGNTPKSGLVVQGIEIRP 289
           ELG+F ++SG D ++  ++E+K    K GL++QGIE RP
Sbjct: 287 ELGQFFNESGCDVVDTSILEIKTPYWKRGLIIQGIEFRP 303

The following BLAST results are available for this feature:

BLAST of MS002261.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135496.1	1.7e-167	99.31	F-box protein PP2-B10-like [Momordica charantia]	[more]
XP_038878468.1	4.5e-128	77.16	F-box protein PP2-B10-like [Benincasa hispida]	[more]
XP_022134922.1	3.2e-126	76.37	F-box protein PP2-B10-like isoform X2 [Momordica charantia]	[more]
XP_022134921.1	3.2e-126	76.37	F-box protein PP2-B10-like isoform X1 [Momordica charantia]	[more]
XP_038880064.1	2.7e-120	73.45	F-box protein PP2-B10-like [Benincasa hispida]	[more]

BLAST of MS002261.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVQ6	2.6e-62	46.32	F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1	[more]
Q3E6P4	3.4e-62	45.32	F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1	[more]
Q6NPT8	1.0e-58	41.35	F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1	[more]
Q9ZVQ8	4.4e-57	41.46	Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1	[more]
Q9ZVR5	1.0e-53	41.22	Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2	[more]

BLAST of MS002261.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C0X7	8.2e-168	99.31	F-box protein PP2-B10-like OS=Momordica charantia OX=3673 GN=LOC111007437 PE=4 S...	[more]
A0A6J1BZ47	1.6e-126	76.37	F-box protein PP2-B10-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A6J1C117	1.6e-126	76.37	F-box protein PP2-B10-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A6J1ES31	4.3e-116	70.10	F-box protein PP2-B10-like OS=Cucurbita moschata OX=3662 GN=LOC111436000 PE=4 SV...	[more]
A0A6J1KK45	5.8e-113	68.38	F-box protein PP2-B10-like OS=Cucurbita maxima OX=3661 GN=LOC111495993 PE=4 SV=1	[more]

BLAST of MS002261.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02360.1	1.9e-63	46.32	phloem protein 2-B10	[more]
AT2G02240.1	2.4e-63	45.32	F-box family protein	[more]
AT2G02230.1	7.4e-60	41.35	phloem protein 2-B1	[more]
AT2G02340.1	3.1e-58	41.46	phloem protein 2-B8	[more]
AT2G02250.1	7.1e-55	41.22	phloem protein 2-B2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 11..54 e-value: 1.9E-4 score: 21.2
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 109..288 e-value: 3.6E-55 score: 186.0
None	No IPR available	GENE3D	1.20.1280.50		coord: 10..52 e-value: 3.2E-6 score: 28.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..242
None	No IPR available	PANTHER	PTHR32278:SF71	SUBFAMILY NOT NAMED	coord: 4..289
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 4..289
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 7..114

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS002261	MS002261	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS002261.1-cds	MS002261.1-cds-scaffold30:3676806..3677102	CDS
MS002261.1-cds	MS002261.1-cds-scaffold30:3678169..3678287	CDS
MS002261.1-cds	MS002261.1-cds-scaffold30:3678385..3678841	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS002261.1	MS002261.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding