MS002206.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS002206.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Choline monooxygenase, chloroplastic
Location	scaffold30: 3219248 .. 3222504 (+)
Sequence length	1323
RNA-Seq Expression	MS002206.1
Synteny	MS002206.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACGATAATCAAGCAAATTCCCACTCACTTCTTCCAACCTCCTGGCATCGCTACGCCTTCGATCAATCATCGTCCTTCAATGCCAATCTCGGCGGTTTCCACTTTTCGAAACCCAGATTCTCGCTTCGTTGAAGCTCAGAAACTCGTTCATGAATTCGACCCTGAAATTCCCCTAGAGAAGGCCCTCACTCCACCCAGCTCCTGGTACACTGATCCTTCCTTTTTCGCTCTCGAGCTCGATCGTGTCTTCTACAGAGGATGGCAGGCCGTGGGTTCGTTTTCGTTTCCATCTCTAGATTCTTCTTCGTCTTTTGCCGCTCTATTTAATCGTATATGTAAATCGAGACGATAAATTTTAAGGTTTAAATGTTGCTGCAATCTGCGCTCTCTAGAATGGAAAATCCCTTTAAATCTCTCCCACCTAAGTCCTTTTTGTGGATTTAGTATTTCCTTCTTGTGGCATTACGCTAGAAAGATAATTAAATCTTCATTGAATATCTACGATTTGAACCCGGAAGAAAATATACGAAAAAAGAAAAGAAAACAATGGTTCCATTGAGTGTTAGAAAGAGAACGACCATGGGTCGACTCCCCCTTCCTGTGGGGTTTGGGGTGACTTTGAGTTGACATAGTAACATTTTTCTTCAACTGAGTGTCAAGAAGGAAAGTAAGCTGAGATGAATAGTTTCTGCTTTTCATTAACTGAGAAATTGGAAGTTTTTGCTGTTTGATGGAGTAATTTGTTATGGGGTTTCTCATGCACTCAAAGCAGACCAAACCCATTGAAATTCTGTACTCTTCTTTGCTCTACAGCTAATGCAATCTGCTCTTTTTATTTTTCCTCTTTAGATTATAACTCTCACAATATTGATGCATGGATCATCAACTTCTTGTGCCATTGGCTTGTCAGGATATGTTGAACAATTAAAAGATCCCCATGACTTTTTCACAGGCAGGTGTGATTAATTGTCATCTACCATTTATTACTTATGGTATAAATCTAAAGGGTTGAAATAAAACTATTTCAAATACCAGAAGTTTGTCCATATTTTCCACAGATTGATTAGACCAAATATGAAGTTGAGTCAGTTGACATTTGTAATGCCTTCTGAGTCTTAGATATGGAATCAAATAGCTTGTCCATGAAAGTTGTTGGGTCTTCGTCTCTTTGACCATGGCAGGTTGGGTAATGTTGAGTTTGTGGTGTGTAAAGATAATAACGGGAAGGTTCGTGCATTTCACAACGTTTGCCGCCATCATGCCTCACTTCTCGCTTCTGGAAGTGGGAAAAAGTCATGCTTTGTATGTCCATATCATGTGAGTTCACTTGCATATCTTCTTGTAAGTTTCTTGGGAGTTTTTTTGGTTTCCTTTTCAGTTATTTTCCTGTTGAGCAGATTTAGTTTTTAGTCCTCAACTTTAACTTCAACCACATCAGGTCAATGCATTGTAAACCTTTTTATAAAAGATTATAGTATAACTAGGATGTAAGATTGATTCTGAGATATAACGAGGTGTATGGTGTATCTATACATTATTATTAATTGAACAGCCTTATTTCATATTTTGTGCAGGGATGGACATACGGGTTGGATGGAGTTCTGCTTAAGGCGACTAGAATAAAAGGGATACAGAACTTTGATGTAAACGTATGCCCTTATATCACAGTGATAACAGTTCTGACAACCATTTTAATACAGTGTTTCTGAATGGACTAATAATTGGTTAACTTTTTCTATTGATGGAGATTAGGATTTTGGGCTCATACCATTACTGGTAGCTACATGGGGTCCTTTCGTTCTTCTCAATCTGGATAAAGAGTTACCATCTGAGCAGGAAGTTGACGAGGATAAAGTAGCACGTGAATGGCTTGGAAGCTGTCTAGATGTGCTGAGTTTGAATGGAGTCAATACTTCGTTAAGTTACGTTTGTCGACGCGAATACACCATCGAATGTAATTGGAAGGTATGCCACTTTCATTCTTCGATTAGAGCATGCACTCCTATAGTTTATCCTTCTAGAAAAAAATGTTCTAGTGTTACCAAAAACTGACCAAGAGTTTCAGTTCAAAATAAGATTAAGTAAAGAAATATAAGTAAAAGAGAGGAAGGGAGAGATGACCAAAAGTTTCGGTATCTCGTCGGTTTTTTTGCAGGTATTTTGTGACAACTACTTAGATGGAGGATATCACGTTCCCTATGCGCATAAAGGGCTCGCATCTAATCTCAAGCTCGAGTCTTATTTGACTGAAGTATGACCACTGTTTATTTTGAATTCCTTACCAGCTACTCTTACAGCAATTTCCTTTCATGCCATTTGCTGTTTTAGGATCTGTTTACTTTAGGATTATAAGCTATTGTTCTGTTTTCACCTAAGGTCTGAAAGACCTTCATATAAAGTTAAAATGCAGATTTATGGTAGTTGTTCATTTGCTGTTAATTATCAATGTCACGTGATTACAACTCGTGATGTAGATATTTGAGACTGTTAGCATTCAAAGTTGTAACAGCGGCGAAGAACCGAAAGTCGATGATTATGGTCGCCTTGGATCAGAAGCACTATATGCTTTTATATATCCAAACTTCATGATAAATAGGTGGGCACTGTGTGATCTTTATTTTTTAGTTGTTCTGCTGCTGAACGTTTGTCTCATCAATTTGGGGTTCTATGACAGGTATGGACCTTGGATGGACACAAATTTAGTACTCCCACTCGGACCTCGAAAATGTTTAGTAGTATTCGATTACTTTCTTGAAGCTCCCTTTAAGGTAATTTCGAGTCGTTTGGCCTGATGGTTATGCAATAAGTTCTTTCTGCCTGTGTGCAAGTTCCCGATCAATAACTCGGTTAACGAAACCAGCCGTTGCTTGTGCAAAAATTCTGAAAAACCTGAGCTTTTGTGTTGTGATTTTCAGTTCAATTGGGTTTTTACTATTTTGTCTTCTCCCTTGATTTCACTTCCAGAATGACAACTCTTTTATACAAAAAAGTTTGGAAGACAGTGAAAGAGTGCAGGTATTGCCAACAAATCCTCCCCCTTTCCATCGTCATCATTTGTCTTGTGTTTGAATCAATTGTTACTTTTACCTTTTACAACTTTGGTTTAATTATTGTCAGAATGAAGACATTATTCTGTGTGAGGGTGTTCAAAGGGGCCTCGAGTCGCCTGCTTACAAGTTCGGCCGATACGCTCCTTCGGTCGAGAACGCCATGCACCATTTCCATCGTCTTCTTCATCTTAATCTCACCAAA

mRNA sequence

ATGGCGACGATAATCAAGCAAATTCCCACTCACTTCTTCCAACCTCCTGGCATCGCTACGCCTTCGATCAATCATCGTCCTTCAATGCCAATCTCGGCGGTTTCCACTTTTCGAAACCCAGATTCTCGCTTCGTTGAAGCTCAGAAACTCGTTCATGAATTCGACCCTGAAATTCCCCTAGAGAAGGCCCTCACTCCACCCAGCTCCTGGTACACTGATCCTTCCTTTTTCGCTCTCGAGCTCGATCGTGTCTTCTACAGAGGATGGCAGGCCGTGGGATATGTTGAACAATTAAAAGATCCCCATGACTTTTTCACAGGCAGGTTGGGTAATGTTGAGTTTGTGGTGTGTAAAGATAATAACGGGAAGGTTCGTGCATTTCACAACGTTTGCCGCCATCATGCCTCACTTCTCGCTTCTGGAAGTGGGAAAAAGTCATGCTTTGTATGTCCATATCATGGATGGACATACGGGTTGGATGGAGTTCTGCTTAAGGCGACTAGAATAAAAGGGATACAGAACTTTGATGTAAACGATTTTGGGCTCATACCATTACTGGTAGCTACATGGGGTCCTTTCGTTCTTCTCAATCTGGATAAAGAGTTACCATCTGAGCAGGAAGTTGACGAGGATAAAGTAGCACGTGAATGGCTTGGAAGCTGTCTAGATGTGCTGAGTTTGAATGGAGTCAATACTTCGTTAAGTTACGTTTGTCGACGCGAATACACCATCGAATGTAATTGGAAGGTATTTTGTGACAACTACTTAGATGGAGGATATCACGTTCCCTATGCGCATAAAGGGCTCGCATCTAATCTCAAGCTCGAGTCTTATTTGACTGAAATATTTGAGACTGTTAGCATTCAAAGTTGTAACAGCGGCGAAGAACCGAAAGTCGATGATTATGGTCGCCTTGGATCAGAAGCACTATATGCTTTTATATATCCAAACTTCATGATAAATAGGTGGGCACTGTGTGATCTTTATTTTTTAGTTGTTCTGCTGCTGAACGTTTGTCTCATCAATTTGGGGTTCTATGACAGGTATGGACCTTGGATGGACACAAATTTAGTACTCCCACTCGGACCTCGAAAATGTTTAGTAGTATTCGATTACTTTCTTGAAGCTCCCTTTAAGAATGACAACTCTTTTATACAAAAAAGTTTGGAAGACAGTGAAAGAGTGCAGAATGAAGACATTATTCTGTGTGAGGGTGTTCAAAGGGGCCTCGAGTCGCCTGCTTACAAGTTCGGCCGATACGCTCCTTCGGTCGAGAACGCCATGCACCATTTCCATCGTCTTCTTCATCTTAATCTCACCAAA

Coding sequence (CDS)

ATGGCGACGATAATCAAGCAAATTCCCACTCACTTCTTCCAACCTCCTGGCATCGCTACGCCTTCGATCAATCATCGTCCTTCAATGCCAATCTCGGCGGTTTCCACTTTTCGAAACCCAGATTCTCGCTTCGTTGAAGCTCAGAAACTCGTTCATGAATTCGACCCTGAAATTCCCCTAGAGAAGGCCCTCACTCCACCCAGCTCCTGGTACACTGATCCTTCCTTTTTCGCTCTCGAGCTCGATCGTGTCTTCTACAGAGGATGGCAGGCCGTGGGATATGTTGAACAATTAAAAGATCCCCATGACTTTTTCACAGGCAGGTTGGGTAATGTTGAGTTTGTGGTGTGTAAAGATAATAACGGGAAGGTTCGTGCATTTCACAACGTTTGCCGCCATCATGCCTCACTTCTCGCTTCTGGAAGTGGGAAAAAGTCATGCTTTGTATGTCCATATCATGGATGGACATACGGGTTGGATGGAGTTCTGCTTAAGGCGACTAGAATAAAAGGGATACAGAACTTTGATGTAAACGATTTTGGGCTCATACCATTACTGGTAGCTACATGGGGTCCTTTCGTTCTTCTCAATCTGGATAAAGAGTTACCATCTGAGCAGGAAGTTGACGAGGATAAAGTAGCACGTGAATGGCTTGGAAGCTGTCTAGATGTGCTGAGTTTGAATGGAGTCAATACTTCGTTAAGTTACGTTTGTCGACGCGAATACACCATCGAATGTAATTGGAAGGTATTTTGTGACAACTACTTAGATGGAGGATATCACGTTCCCTATGCGCATAAAGGGCTCGCATCTAATCTCAAGCTCGAGTCTTATTTGACTGAAATATTTGAGACTGTTAGCATTCAAAGTTGTAACAGCGGCGAAGAACCGAAAGTCGATGATTATGGTCGCCTTGGATCAGAAGCACTATATGCTTTTATATATCCAAACTTCATGATAAATAGGTGGGCACTGTGTGATCTTTATTTTTTAGTTGTTCTGCTGCTGAACGTTTGTCTCATCAATTTGGGGTTCTATGACAGGTATGGACCTTGGATGGACACAAATTTAGTACTCCCACTCGGACCTCGAAAATGTTTAGTAGTATTCGATTACTTTCTTGAAGCTCCCTTTAAGAATGACAACTCTTTTATACAAAAAAGTTTGGAAGACAGTGAAAGAGTGCAGAATGAAGACATTATTCTGTGTGAGGGTGTTCAAAGGGGCCTCGAGTCGCCTGCTTACAAGTTCGGCCGATACGCTCCTTCGGTCGAGAACGCCATGCACCATTTCCATCGTCTTCTTCATCTTAATCTCACCAAA

Protein sequence

MATIIKQIPTHFFQPPGIATPSINHRPSMPISAVSTFRNPDSRFVEAQKLVHEFDPEIPLEKALTPPSSWYTDPSFFALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNVEFVVCKDNNGKVRAFHNVCRHHASLLASGSGKKSCFVCPYHGWTYGLDGVLLKATRIKGIQNFDVNDFGLIPLLVATWGPFVLLNLDKELPSEQEVDEDKVAREWLGSCLDVLSLNGVNTSLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYLTEIFETVSIQSCNSGEEPKVDDYGRLGSEALYAFIYPNFMINRWALCDLYFLVVLLLNVCLINLGFYDRYGPWMDTNLVLPLGPRKCLVVFDYFLEAPFKNDNSFIQKSLEDSERVQNEDIILCEGVQRGLESPAYKFGRYAPSVENAMHHFHRLLHLNLTK

Homology

[Close]

BLAST of MS002206.1 vs. NCBI nr
Match: XP_022135573.1 (choline monooxygenase, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 928.3 bits (2398), Expect = 2.4e-266
Identity = 438/441 (99.32%), Postives = 439/441 (99.55%), Query Frame = 0


Query: 1   MATIIKQIPTHFFQPPGIATPSINHRPSMPISAVSTFRNPDSRFVEAQKLVHEFDPEIPL 60
           MATIIKQIPTHFFQPPGIATPSINHRPSMPISAVSTFRNPDSRFVEAQKLVHEFDPEIPL
Sbjct: 1   MATIIKQIPTHFFQPPGIATPSINHRPSMPISAVSTFRNPDSRFVEAQKLVHEFDPEIPL 60

Query: 61  EKALTPPSSWYTDPSFFALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNVEFVVCKDN 120
           EKALTPPSSWYTDPSFF LELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNVEFVVCKDN
Sbjct: 61  EKALTPPSSWYTDPSFFTLELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNVEFVVCKDN 120

Query: 121 NGKVRAFHNVCRHHASLLASGSGKKSCFVCPYHGWTYGLDGVLLKATRIKGIQNFDVNDF 180
           NGKVRAFHNVCRHHASLLASGSGKKSCFVCPYHGWTYGLDGVLLKATRIKGIQNFDVNDF
Sbjct: 121 NGKVRAFHNVCRHHASLLASGSGKKSCFVCPYHGWTYGLDGVLLKATRIKGIQNFDVNDF 180

Query: 181 GLIPLLVATWGPFVLLNLDKELPSEQEVDEDKVAREWLGSCLDVLSLNGVNTSLSYVCRR 240
           GLIPLLVATWGPFVLLNLDKELPSEQEVDEDKVAREWLGSC+DVLSLNGVNTSLSYVCRR
Sbjct: 181 GLIPLLVATWGPFVLLNLDKELPSEQEVDEDKVAREWLGSCVDVLSLNGVNTSLSYVCRR 240

Query: 241 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYLTEIFETVSIQSCNSGEEPKVD 300
           EYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYLTEIFETVSIQSCNSGEEPKVD
Sbjct: 241 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYLTEIFETVSIQSCNSGEEPKVD 300

Query: 301 DYGRLGSEALYAFIYPNFMINRWALCDLYFLVVLLLNVCLINLGFYDRYGPWMDTNLVLP 360
           DYGRLGSEALYAFIYPNFMINRWALCDLYFLVVLLLNVCLINLGFYDRYGPWMDTNLVLP
Sbjct: 301 DYGRLGSEALYAFIYPNFMINRWALCDLYFLVVLLLNVCLINLGFYDRYGPWMDTNLVLP 360

Query: 361 LGPRKCLVVFDYFLEAPFKNDNSFIQKSLEDSERVQNEDIILCEGVQRGLESPAYKFGRY 420
           LGPRKCLVVFDYFLEAPFKNDNSFIQKSLEDSERVQNEDIILCEGVQRGLESPAYKFGRY
Sbjct: 361 LGPRKCLVVFDYFLEAPFKNDNSFIQKSLEDSERVQNEDIILCEGVQRGLESPAYKFGRY 420

Query: 421 APSVENAMHHFHRLLHLNLTK 442
           APSVENAMHHFHR LHLNLTK
Sbjct: 421 APSVENAMHHFHRRLHLNLTK 441

[Close]

BLAST of MS002206.1 vs. NCBI nr
Match: XP_022135574.1 (choline monooxygenase, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 862.4 bits (2227), Expect = 1.6e-246
Identity = 412/441 (93.42%), Postives = 413/441 (93.65%), Query Frame = 0


Query: 1   MATIIKQIPTHFFQPPGIATPSINHRPSMPISAVSTFRNPDSRFVEAQKLVHEFDPEIPL 60
           MATIIKQIPTHFFQPPGIATPSINHRPSMPISAVSTFRNPDSRFVEAQKLVHEFDPEIPL
Sbjct: 1   MATIIKQIPTHFFQPPGIATPSINHRPSMPISAVSTFRNPDSRFVEAQKLVHEFDPEIPL 60

Query: 61  EKALTPPSSWYTDPSFFALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNVEFVVCKDN 120
           EKALTPPSSWYTDPSFF LELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNVEFVVCKDN
Sbjct: 61  EKALTPPSSWYTDPSFFTLELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNVEFVVCKDN 120

Query: 121 NGKVRAFHNVCRHHASLLASGSGKKSCFVCPYHGWTYGLDGVLLKATRIKGIQNFDVNDF 180
           NGKVRAFHNVCRHHASLLASGSGKKSCFVCPYHGWTYGLDGVLLKATRIKGIQNFDVNDF
Sbjct: 121 NGKVRAFHNVCRHHASLLASGSGKKSCFVCPYHGWTYGLDGVLLKATRIKGIQNFDVNDF 180

Query: 181 GLIPLLVATWGPFVLLNLDKELPSEQEVDEDKVAREWLGSCLDVLSLNGVNTSLSYVCRR 240
           GLIPLLVATWGPFVLLNLDKELPSEQEVDEDKVAREWLGSC+DVLSLNGVNTSLSYVCRR
Sbjct: 181 GLIPLLVATWGPFVLLNLDKELPSEQEVDEDKVAREWLGSCVDVLSLNGVNTSLSYVCRR 240

Query: 241 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYLTEIFETVSIQSCNSGEEPKVD 300
           EYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYLTEIFETVSIQSCNSGEEPKVD
Sbjct: 241 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYLTEIFETVSIQSCNSGEEPKVD 300

Query: 301 DYGRLGSEALYAFIYPNFMINRWALCDLYFLVVLLLNVCLINLGFYDRYGPWMDTNLVLP 360
           DYGRLGSEALYAFIYPNFMIN                          RYGPWMDTNLVLP
Sbjct: 301 DYGRLGSEALYAFIYPNFMIN--------------------------RYGPWMDTNLVLP 360

Query: 361 LGPRKCLVVFDYFLEAPFKNDNSFIQKSLEDSERVQNEDIILCEGVQRGLESPAYKFGRY 420
           LGPRKCLVVFDYFLEAPFKNDNSFIQKSLEDSERVQNEDIILCEGVQRGLESPAYKFGRY
Sbjct: 361 LGPRKCLVVFDYFLEAPFKNDNSFIQKSLEDSERVQNEDIILCEGVQRGLESPAYKFGRY 415

Query: 421 APSVENAMHHFHRLLHLNLTK 442
           APSVENAMHHFHR LHLNLTK
Sbjct: 421 APSVENAMHHFHRRLHLNLTK 415

[Close]

BLAST of MS002206.1 vs. NCBI nr
Match: XP_022987329.1 (choline monooxygenase, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 742.3 bits (1915), Expect = 2.5e-210
Identity = 361/451 (80.04%), Postives = 381/451 (84.48%), Query Frame = 0


Query: 1   MATIIKQIPTHFFQP--PGIATPSINHRPSMPISAVSTFRNPDSRFVEAQKLVHEFDPEI 60
           MA + K I THFFQP        S +HR    IS   +FRN DS F+EA KLV EFDPEI
Sbjct: 1   MAALTKHIHTHFFQPLFASFNFQSRSHRSPTRISPTLSFRNSDSHFIEALKLVDEFDPEI 60

Query: 61  PLEKALTPPSSWYTDPSFFALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNVEFVVCK 120
           PLEKA+TPPSSWYTDPSFFALELDRVF+RGWQAVGYVEQLKDPHDFFTGRLGNVE+VVCK
Sbjct: 61  PLEKAVTPPSSWYTDPSFFALELDRVFHRGWQAVGYVEQLKDPHDFFTGRLGNVEYVVCK 120

Query: 121 DNNGKVRAFHNVCRHHASLLASGSGKKSCFVCPYHGWTYGLDGVLLKATRIKGIQNFDVN 180
           DNN KVRAFHNVCRHHASLLASG GKKSCFVCPYHGWTYGLDG LLKATRI GIQNFDVN
Sbjct: 121 DNNKKVRAFHNVCRHHASLLASGCGKKSCFVCPYHGWTYGLDGGLLKATRINGIQNFDVN 180

Query: 181 DFGLIPLLVATWGPFVLLNLDKELPSEQEVDEDKVAREWLGSCLDVLSLNGVNTSLSYVC 240
           DFGL+PL VATWGPFVLLN+D++L SE  VDEDKVA EWLGSC D+LSLNGV+ SLS+VC
Sbjct: 181 DFGLVPLPVATWGPFVLLNMDEKLSSELVVDEDKVAYEWLGSCADLLSLNGVDASLSFVC 240

Query: 241 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYLTEIFETVSIQSCNSGEEPK 300
           RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESY TEIFE VSIQSC  G E K
Sbjct: 241 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYSTEIFEAVSIQSCKGGGESK 300

Query: 301 VDDYGRLGSEALYAFIYPNFMINRW--------ALCDLYFLVVLLLNVCLINLGFYDRYG 360
            DDYGRLG EALYAF+YPNFMINR+        AL    F  V LL       G Y+RYG
Sbjct: 301 GDDYGRLGPEALYAFVYPNFMINRYFLDTSTYLALWLFMFRDVFLLMFVSSFSGLYNRYG 360

Query: 361 PWMDTNLVLPLGPRKCLVVFDYFLEAPFKNDNSFIQKSLEDSERVQNEDIILCEGVQRGL 420
           PWMDTNLVLPLGP+KCLVVFDYFLE PFKND SFIQ+SLEDSE VQ EDIILCEGVQ+GL
Sbjct: 361 PWMDTNLVLPLGPQKCLVVFDYFLETPFKNDESFIQQSLEDSESVQIEDIILCEGVQKGL 420

Query: 421 ESPAYKFGRYAPSVENAMHHFHRLLHLNLTK 442
           ESPAYKFGRYAPSVENAMHHFHRLLHLNLTK
Sbjct: 421 ESPAYKFGRYAPSVENAMHHFHRLLHLNLTK 451

[Close]

BLAST of MS002206.1 vs. NCBI nr
Match: XP_038880722.1 (choline monooxygenase, chloroplastic [Benincasa hispida])

HSP 1 Score: 737.6 bits (1903), Expect = 6.1e-209
Identity = 356/443 (80.36%), Postives = 373/443 (84.20%), Query Frame = 0


Query: 1   MATIIKQIPTHFFQPPGIA--TPSINHRPSMPISAVSTFRNPDSRFVEAQKLVHEFDPEI 60
           MAT+ K I THFFQPP I+    S NHR    ISA  +FRN DS F+EAQKLV EFDPEI
Sbjct: 1   MATLTKHIHTHFFQPPSISFNLHSCNHRSPSRISAALSFRNSDSHFIEAQKLVDEFDPEI 60

Query: 61  PLEKALTPPSSWYTDPSFFALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNVEFVVCK 120
           PLEKA+TPPSSWY DPSF+ALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNVE+VVCK
Sbjct: 61  PLEKAVTPPSSWYIDPSFYALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNVEYVVCK 120

Query: 121 DNNGKVRAFHNVCRHHASLLASGSGKKSCFVCPYHGWTYGLDGVLLKATRIKGIQNFDVN 180
           DNN KVRAFHNVCRHHASLLASG GK+SCFVCPYHGWTYGLDGVLLKATRI GIQNFD N
Sbjct: 121 DNNRKVRAFHNVCRHHASLLASGCGKRSCFVCPYHGWTYGLDGVLLKATRINGIQNFDEN 180

Query: 181 DFGLIPLLVATWGPFVLLNLDKELPSEQEVDEDKVAREWLGSCLDVLSLNGVNTSLSYVC 240
           +FGLIPL VATWGPFVLLNLD +L SE +VDEDKV  EWLGSC D+LSLNGV+ SLSYVC
Sbjct: 181 NFGLIPLPVATWGPFVLLNLDGKLSSELDVDEDKVPGEWLGSCADLLSLNGVDASLSYVC 240

Query: 241 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYLTEIFETVSIQSCNSGEEPK 300
           RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKL+SY TEIFETVSIQSC  G E K
Sbjct: 241 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLDSYSTEIFETVSIQSCKGGGEAK 300

Query: 301 VDDYGRLGSEALYAFIYPNFMINRWALCDLYFLVVLLLNVCLINLGFYDRYGPWMDTNLV 360
            +DYGRLG EALYAFIYPNFMIN                          RYGPWMDTNLV
Sbjct: 301 GNDYGRLGPEALYAFIYPNFMIN--------------------------RYGPWMDTNLV 360

Query: 361 LPLGPRKCLVVFDYFLEAPFKNDNSFIQKSLEDSERVQNEDIILCEGVQRGLESPAYKFG 420
           LPLG RKCLVVFDYFLEA FKND  FIQ+SLEDSE VQ EDIILCEGVQ+GLESPAYKFG
Sbjct: 361 LPLGARKCLVVFDYFLEASFKNDGPFIQRSLEDSESVQKEDIILCEGVQKGLESPAYKFG 417

Query: 421 RYAPSVENAMHHFHRLLHLNLTK 442
           RYAPSVENAMHHFHRLLHLNLTK
Sbjct: 421 RYAPSVENAMHHFHRLLHLNLTK 417

[Close]

BLAST of MS002206.1 vs. NCBI nr
Match: XP_008443631.1 (PREDICTED: choline monooxygenase, chloroplastic isoform X2 [Cucumis melo] >KAA0060178.1 choline monooxygenase [Cucumis melo var. makuwa])

HSP 1 Score: 734.6 bits (1895), Expect = 5.1e-208
Identity = 352/443 (79.46%), Postives = 374/443 (84.42%), Query Frame = 0


Query: 1   MATIIKQIPTHFFQPPGIA--TPSINHRPSMPISAVSTFRNPDSRFVEAQKLVHEFDPEI 60
           MAT+ K I  HFFQPP I+      NHR    ISA  +FR+PDSRF+EA+KLV +FDPEI
Sbjct: 1   MATLTKHIQIHFFQPPSISFNFHFCNHRSPSRISASLSFRSPDSRFIEARKLVDDFDPEI 60

Query: 61  PLEKALTPPSSWYTDPSFFALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNVEFVVCK 120
           PLEKALTPPSSWY DPSFFALELDRVFYRGWQAVGYVEQLKD HDFFTGRLGNVE+VVCK
Sbjct: 61  PLEKALTPPSSWYIDPSFFALELDRVFYRGWQAVGYVEQLKDAHDFFTGRLGNVEYVVCK 120

Query: 121 DNNGKVRAFHNVCRHHASLLASGSGKKSCFVCPYHGWTYGLDGVLLKATRIKGIQNFDVN 180
           DNN KVRAFHNVCRHHASLLA+G GKKSCFVCPYHGWTYGLDG+LLKATRI GIQNF+ N
Sbjct: 121 DNNRKVRAFHNVCRHHASLLATGCGKKSCFVCPYHGWTYGLDGILLKATRINGIQNFNEN 180

Query: 181 DFGLIPLLVATWGPFVLLNLDKELPSEQEVDEDKVAREWLGSCLDVLSLNGVNTSLSYVC 240
           DFGL+PL VA WGPFVLLNLD +L S+ +VDEDKVAREWLG+C DVL LNGV+ SLSYVC
Sbjct: 181 DFGLVPLPVAMWGPFVLLNLDGKLSSKPDVDEDKVAREWLGTCADVLRLNGVDASLSYVC 240

Query: 241 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYLTEIFETVSIQSCNSGEEPK 300
           RREYTI+CNWKVFCDNYLDGGYHVPYAHKGLASNL LESY TE+FETVSIQSC  G E K
Sbjct: 241 RREYTIDCNWKVFCDNYLDGGYHVPYAHKGLASNLNLESYSTELFETVSIQSCKGGGESK 300

Query: 301 VDDYGRLGSEALYAFIYPNFMINRWALCDLYFLVVLLLNVCLINLGFYDRYGPWMDTNLV 360
            DDYGRLG EALYAFIYPNFMIN                          RYGPWMDTNLV
Sbjct: 301 GDDYGRLGPEALYAFIYPNFMIN--------------------------RYGPWMDTNLV 360

Query: 361 LPLGPRKCLVVFDYFLEAPFKNDNSFIQKSLEDSERVQNEDIILCEGVQRGLESPAYKFG 420
           LPLGPRKCLVVFDYFLEA FKND+SFIQ+SLEDSE VQNEDIILCEGVQ+GLESPAYKFG
Sbjct: 361 LPLGPRKCLVVFDYFLEASFKNDDSFIQQSLEDSESVQNEDIILCEGVQKGLESPAYKFG 417

Query: 421 RYAPSVENAMHHFHRLLHLNLTK 442
           RYAPSVENAMHHFHRLLH NLTK
Sbjct: 421 RYAPSVENAMHHFHRLLHRNLTK 417

[Close]

BLAST of MS002206.1 vs. ExPASy Swiss-Prot
Match: Q9SZR0 (Choline monooxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g29890 PE=2 SV=2)

HSP 1 Score: 542.0 bits (1395), Expect = 6.4e-153
Identity = 259/406 (63.79%), Postives = 302/406 (74.38%), Query Frame = 0


Query: 37  FRNPDSRFV--EAQKLVHEFDPEIPLEKALTPPSSWYTDPSFFALELDRVFYRGWQAVGY 96
           F NP   F   +  KLV EFDP+IPLE+A TPPSSWYTDP F++ ELDRVFY GWQAVGY
Sbjct: 42  FHNPTRVFAVSDISKLVTEFDPKIPLERASTPPSSWYTDPQFYSFELDRVFYGGWQAVGY 101

Query: 97  VEQLKDPHDFFTGRLGNVEFVVCKDNNGKVRAFHNVCRHHASLLASGSGKKSCFVCPYHG 156
            +Q+K+  DFFTGRLG+V+FVVC+D NGK+ AFHNVC HHAS+LASG+G+KSCFVC YHG
Sbjct: 102 SDQIKESRDFFTGRLGDVDFVVCRDENGKIHAFHNVCSHHASILASGNGRKSCFVCLYHG 161

Query: 157 WTYGLDGVLLKATRIKGIQNFDVNDFGLIPLLVATWGPFVLLNLDKELPSEQEVDEDK-V 216
           WTY L G L+KATR+ GIQNF +++ GL PL VA WGPFVLL +      + EV+ D+ V
Sbjct: 162 WTYSLSGSLVKATRMSGIQNFSLSEMGLKPLRVAVWGPFVLLKVTAATSRKGEVETDELV 221

Query: 217 AREWLGSCLDVLSLNGVNTSLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNL 276
           A EWLG+ +  LS  GV++ LSY+CRREYTI+CNWKVFCDNYLDGGYHVPYAHKGL S L
Sbjct: 222 ASEWLGTSVGRLSQGGVDSPLSYICRREYTIDCNWKVFCDNYLDGGYHVPYAHKGLMSGL 281

Query: 277 KLESYLTEIFETVSIQSCNSGEEPKVDDYGRLGSEALYAFIYPNFMINRWALCDLYFLVV 336
            LE+Y T IFE VSIQ C  G +   D + RLGSEALYAF+YPNFMIN            
Sbjct: 282 DLETYSTTIFEKVSIQECGGGSKVGEDGFDRLGSEALYAFVYPNFMIN------------ 341

Query: 337 LLLNVCLINLGFYDRYGPWMDTNLVLPLGPRKCLVVFDYFLEAPFKNDNSFIQKSLEDSE 396
                         RYGPWMDTNLVLPLGPRKC VVFDYFL+   K+D +FI++SLE+S+
Sbjct: 342 --------------RYGPWMDTNLVLPLGPRKCKVVFDYFLDPSLKDDEAFIKRSLEESD 401

Query: 397 RVQNEDIILCEGVQRGLESPAYKFGRYAPSVENAMHHFHRLLHLNL 440
           RVQ ED++LCE VQRGLES AY  GRYA  VE  MHHFH LLH NL
Sbjct: 402 RVQMEDVMLCESVQRGLESQAYDKGRYA-LVEKPMHHFHCLLHHNL 420

[Close]

BLAST of MS002206.1 vs. ExPASy Swiss-Prot
Match: Q93XE1 (Choline monooxygenase, chloroplastic OS=Amaranthus tricolor OX=29722 GN=CMO PE=2 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 4.5e-122
Identity = 211/425 (49.65%), Postives = 277/425 (65.18%), Query Frame = 0


Query: 15  PPGIATPSINHRPSMPISAVSTFRNPDSRFVEAQKLVHEFDPEIPLEKALTPPSSWYTDP 74
           P  +A+P I   PS   S   T   P+      ++++HEFDP++P E   TPPS+WYTDP
Sbjct: 57  PKAVASPVI---PSSINSNNITTTTPN-----IKRIIHEFDPKVPAEDGFTPPSTWYTDP 116

Query: 75  SFFALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNVEFVVCKDNNGKVRAFHNVCRHH 134
           S ++ ELDR+F +GWQ  GY +Q+K+P+ +FTG LGNVE++VC+D  GKV AFHNVC H 
Sbjct: 117 SLYSHELDRIFSKGWQVAGYSDQIKEPNQYFTGSLGNVEYLVCRDGQGKVHAFHNVCTHR 176

Query: 135 ASLLASGSGKKSCFVCPYHGWTYGLDGVLLKATRIKGIQNFDVNDFGLIPLLVATWGPFV 194
           AS+LA G+GKKSCFVCPYHGW +GLDG L+KAT+ +  Q FD  + GL+ L VA WGPFV
Sbjct: 177 ASILACGTGKKSCFVCPYHGWVFGLDGSLMKATKTEN-QVFDPKELGLVTLKVAIWGPFV 236

Query: 195 LLNLDKELPSEQEVDEDKVAREWLGSCLDVLSLNGVNTSLSYVCRREYTIECNWKVFCDN 254
           L++LD+   S  E  ED V +EW+GSC + +  +  + SL ++ R E+ +E NWKVFCDN
Sbjct: 237 LISLDR---SGSEGTED-VGKEWIGSCAEEVKKHAFDPSLQFINRSEFPMESNWKVFCDN 296

Query: 255 YLDGGYHVPYAHKGLASNLKLESYLTEIFETVSIQSCNSGEEPKVDDYGRLGSEALYAFI 314
           YLD  YHVPYAHK  A+ L  ++Y T++ E V IQ   S    K + + RLGSEA YAFI
Sbjct: 297 YLDSAYHVPYAHKYYAAELDFDTYKTDLLEKVVIQRVASSSN-KPNGFDRLGSEAFYAFI 356

Query: 315 YPNFMINRWALCDLYFLVVLLLNVCLINLGFYDRYGPWMDTNLVLPLGPRKCLVVFDYFL 374
           YPNF +                          +RYGPWM T  + PLGPRKC +V DY+L
Sbjct: 357 YPNFAV--------------------------ERYGPWMTTMHIGPLGPRKCKLVVDYYL 416

Query: 375 EAPFKNDNSFIQKSLEDSERVQNEDIILCEGVQRGLESPAYKFGRYAPSVENAMHHFHRL 434
           E    ND  +I+KS+  ++ VQ ED++LCE VQRGLE+PAY+ GRY   +E  +HHFH  
Sbjct: 417 ENAMMNDKPYIEKSIMINDNVQKEDVVLCESVQRGLETPAYRSGRYVMPIEKGIHHFHCW 441

Query: 435 LHLNL 440
           LH  L
Sbjct: 477 LHQTL 441

[Close]

BLAST of MS002206.1 vs. ExPASy Swiss-Prot
Match: O22553 (Choline monooxygenase, chloroplastic OS=Beta vulgaris OX=161934 GN=CMO PE=2 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 2.3e-118
Identity = 202/428 (47.20%), Postives = 268/428 (62.62%), Query Frame = 0


Query: 18  IATPSINHRPSMPIS------AVSTFRNPDSRFVEAQKLVHEFDPEIPLEKALTPPSSWY 77
           + TP+IN   +  I+         T +   +     + LVHEFDPEIP E ALTPPS+WY
Sbjct: 50  LQTPNINTSTNKIITKAVASPVFPTLKTTSNTPSSIRSLVHEFDPEIPPEDALTPPSTWY 109

Query: 78  TDPSFFALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNVEFVVCKDNNGKVRAFHNVC 137
           T+P+F++ EL+R+FY+GWQ  GY EQ+K+ + +FTG LGNVE++V +D  G++ AFHNVC
Sbjct: 110 TEPAFYSHELERIFYKGWQVAGYSEQVKEKNQYFTGSLGNVEYLVSRDGQGELHAFHNVC 169

Query: 138 RHHASLLASGSGKKSCFVCPYHGWTYGLDGVLLKATRIKGIQNFDVNDFGLIPLLVATWG 197
            H AS+LA GSGKKSCFVCPYHGW YGLDG L KA++    QN D  + GL PL VA WG
Sbjct: 170 THRASILACGSGKKSCFVCPYHGWVYGLDGSLAKASKATETQNLDPKELGLAPLKVAEWG 229

Query: 198 PFVLLNLDKELPSEQEVDEDKVAREWLGSCLDVLSLNGVNTSLSYVCRREYTIECNWKVF 257
           PF+L++LD+ L +  +     V  EW+G   + +  +  + +L +  R E+ +ECNWKVF
Sbjct: 230 PFILISLDRSLDANAD-----VGTEWIGKSAEDVKAHAFDPNLKFTHRSEFPMECNWKVF 289

Query: 258 CDNYLDGGYHVPYAHKGLASNLKLESYLTEIFETVSIQSCNSGEEPKVDDYGRLGSEALY 317
           CDNYLD  YHVPYAHK  A+ L  ++Y TE+ E   IQ   S    K D + RLG+EA Y
Sbjct: 290 CDNYLDSSYHVPYAHKYYAAELDFDTYNTEMIEKCVIQRVGSSSN-KPDGFDRLGTEAFY 349

Query: 318 AFIYPNFMINRWALCDLYFLVVLLLNVCLINLGFYDRYGPWMDTNLVLPLGPRKCLVVFD 377
           AFIYPNF +                          +RYG WM T  V+P+G RKC +V D
Sbjct: 350 AFIYPNFAV--------------------------ERYGTWMTTMHVVPMGQRKCKLVVD 409

Query: 378 YFLEAPFKNDNSFIQKSLEDSERVQNEDIILCEGVQRGLESPAYKFGRYAPSVENAMHHF 437
           Y+LE    +D ++I K +  ++ VQ ED +LCE VQRGLE+PAY+ GRY   +E  +HHF
Sbjct: 410 YYLEKAMLDDKAYIDKGIAINDNVQKEDKVLCESVQRGLETPAYRSGRYVMPIEKGIHHF 445

Query: 438 HRLLHLNL 440
           H  LH  L
Sbjct: 470 HCWLHETL 445

[Close]

BLAST of MS002206.1 vs. ExPASy Swiss-Prot
Match: O04121 (Choline monooxygenase, chloroplastic OS=Spinacia oleracea OX=3562 GN=CMO PE=1 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 3.9e-118
Identity = 204/431 (47.33%), Postives = 270/431 (62.65%), Query Frame = 0


Query: 9   PTHFFQPPGIATPSINHRPSMPISAVSTFRNPDSRFVEAQKLVHEFDPEIPLEKALTPPS 68
           PT   + P   T +    PS P    +T   P S     Q LVHEFDP+IP E A TPPS
Sbjct: 47  PTLKSRTPNKITTNAVAAPSFPSLTTTT---PSS----IQSLVHEFDPQIPPEDAHTPPS 106

Query: 69  SWYTDPSFFALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNVEFVVCKDNNGKVRAFH 128
           SWYT+P+F++ EL+R+FY+GWQ  G  +Q+K+P+ +FTG LGNVE++V +D  GKV AFH
Sbjct: 107 SWYTEPAFYSHELERIFYKGWQVAGISDQIKEPNQYFTGSLGNVEYLVSRDGEGKVHAFH 166

Query: 129 NVCRHHASLLASGSGKKSCFVCPYHGWTYGLDGVLLKATRIKGIQNFDVNDFGLIPLLVA 188
           NVC H AS+LA GSGKKSCFVCPYHGW YG+DG L KA++ K  QN D  + GL+PL VA
Sbjct: 167 NVCTHRASILACGSGKKSCFVCPYHGWVYGMDGSLAKASKAKPEQNLDPKELGLVPLKVA 226

Query: 189 TWGPFVLLNLDKELPSEQEVDEDKVAREWLGSCLDVLSLNGVNTSLSYVCRREYTIECNW 248
            WGPFVL++LD+ L      +   V  EWLG+  + +  +  + SL ++ R E+ +E NW
Sbjct: 227 VWGPFVLISLDRSLE-----EGGDVGTEWLGTSAEDVKAHAFDPSLQFIHRSEFPMESNW 286

Query: 249 KVFCDNYLDGGYHVPYAHKGLASNLKLESYLTEIFETVSIQSCNSGEEPKVDDYGRLGSE 308
           K+F DNYLD  YHVPYAHK  A+ L  ++Y T++ E V+IQ    G   K D + R+G +
Sbjct: 287 KIFSDNYLDSSYHVPYAHKYYATELNFDTYDTQMIENVTIQRV-EGSSNKPDGFDRVGIQ 346

Query: 309 ALYAFIYPNFMINRWALCDLYFLVVLLLNVCLINLGFYDRYGPWMDTNLVLPLGPRKCLV 368
           A YAF YPNF +                          +RYGPWM T  + PLGPRKC +
Sbjct: 347 AFYAFAYPNFAV--------------------------ERYGPWMTTMHIHPLGPRKCKL 406

Query: 369 VFDYFLEAPFKNDNSFIQKSLEDSERVQNEDIILCEGVQRGLESPAYKFGRYAPSVENAM 428
           V DY++E    +D  +I+K +  ++ VQ ED++LCE VQRGLE+PAY+ GRY   +E  +
Sbjct: 407 VVDYYIENSMLDDKDYIEKGIAINDNVQREDVVLCESVQRGLETPAYRSGRYVMPIEKGI 438

Query: 429 HHFHRLLHLNL 440
           HHFH  L   L
Sbjct: 467 HHFHCWLQQTL 438

[Close]

BLAST of MS002206.1 vs. ExPASy Swiss-Prot
Match: Q9LKN0 (Choline monooxygenase, chloroplastic OS=Atriplex hortensis OX=34272 GN=CMO PE=2 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 1.9e-117
Identity = 195/410 (47.56%), Postives = 267/410 (65.12%), Query Frame = 0


Query: 27  PSMPISAVSTFRNPDSRFVEAQKLVHEFDPEIPLEKALTPPSSWYTDPSFFALELDRVFY 86
           P+ P    +T   P S     Q LV +FDP +P E ALTPPSSWYT+P+F+A ELDR+FY
Sbjct: 63  PAFPSVTTTTTTTPSS----IQSLVKDFDPLVPAEDALTPPSSWYTEPAFYAHELDRIFY 122

Query: 87  RGWQAVGYVEQLKDPHDFFTGRLGNVEFVVCKDNNGKVRAFHNVCRHHASLLASGSGKKS 146
           +GWQ  GY +Q+K+ + +FTG LGNVE++VC+D  GKV AFHNVC H AS+LA GSGKKS
Sbjct: 123 KGWQVAGYSDQVKEANQYFTGTLGNVEYLVCRDGEGKVHAFHNVCTHRASILACGSGKKS 182

Query: 147 CFVCPYHGWTYGLDGVLLKATRIKGIQNFDVNDFGLIPLLVATWGPFVLLNLDKELPSEQ 206
           CFVCPYHGW YG++G L KA++    Q+ + ++ GL+PL VA WGPF+L++LD+   S +
Sbjct: 183 CFVCPYHGWVYGMNGSLTKASKATPEQSLNPDELGLVPLKVAVWGPFILISLDR---SSR 242

Query: 207 EVDEDKVAREWLGSCLDVLSLNGVNTSLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAH 266
           EV +  V  EWLGSC + +  +  + +L ++ R E+ IE NWK+F DNYLD  YHVPYAH
Sbjct: 243 EVGD--VGSEWLGSCAEDVKAHAFDPNLQFINRSEFPIESNWKIFSDNYLDSSYHVPYAH 302

Query: 267 KGLASNLKLESYLTEIFETVSIQSCNSGEEPKVDDYGRLGSEALYAFIYPNFMINRWALC 326
           K  A+ L  ++Y T++   V+IQ          + + RLG++A YAF YPNF +      
Sbjct: 303 KYYATELDFDTYQTDMVGNVTIQRVAGTSN---NGFNRLGTQAFYAFAYPNFAV------ 362

Query: 327 DLYFLVVLLLNVCLINLGFYDRYGPWMDTNLVLPLGPRKCLVVFDYFLEAPFKNDNSFIQ 386
                               +RYGPWM T  ++PLGPRKC +V DY++E    +D  +I+
Sbjct: 363 --------------------ERYGPWMTTMHIVPLGPRKCKLVVDYYIEKSKLDDKDYIE 422

Query: 387 KSLEDSERVQNEDIILCEGVQRGLESPAYKFGRYAPSVENAMHHFHRLLH 437
           K +  ++ VQ ED++LCE VQ+GLE+PAY+ GRY   +E  +HHFH  LH
Sbjct: 423 KGIAINDNVQKEDVVLCESVQKGLETPAYRSGRYVMPIEKGIHHFHCWLH 434

[Close]

BLAST of MS002206.1 vs. ExPASy TrEMBL
Match: A0A6J1C563 (Choline monooxygenase, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111007490 PE=3 SV=1)

HSP 1 Score: 928.3 bits (2398), Expect = 1.2e-266
Identity = 438/441 (99.32%), Postives = 439/441 (99.55%), Query Frame = 0


Query: 1   MATIIKQIPTHFFQPPGIATPSINHRPSMPISAVSTFRNPDSRFVEAQKLVHEFDPEIPL 60
           MATIIKQIPTHFFQPPGIATPSINHRPSMPISAVSTFRNPDSRFVEAQKLVHEFDPEIPL
Sbjct: 1   MATIIKQIPTHFFQPPGIATPSINHRPSMPISAVSTFRNPDSRFVEAQKLVHEFDPEIPL 60

Query: 61  EKALTPPSSWYTDPSFFALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNVEFVVCKDN 120
           EKALTPPSSWYTDPSFF LELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNVEFVVCKDN
Sbjct: 61  EKALTPPSSWYTDPSFFTLELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNVEFVVCKDN 120

Query: 121 NGKVRAFHNVCRHHASLLASGSGKKSCFVCPYHGWTYGLDGVLLKATRIKGIQNFDVNDF 180
           NGKVRAFHNVCRHHASLLASGSGKKSCFVCPYHGWTYGLDGVLLKATRIKGIQNFDVNDF
Sbjct: 121 NGKVRAFHNVCRHHASLLASGSGKKSCFVCPYHGWTYGLDGVLLKATRIKGIQNFDVNDF 180

Query: 181 GLIPLLVATWGPFVLLNLDKELPSEQEVDEDKVAREWLGSCLDVLSLNGVNTSLSYVCRR 240
           GLIPLLVATWGPFVLLNLDKELPSEQEVDEDKVAREWLGSC+DVLSLNGVNTSLSYVCRR
Sbjct: 181 GLIPLLVATWGPFVLLNLDKELPSEQEVDEDKVAREWLGSCVDVLSLNGVNTSLSYVCRR 240

Query: 241 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYLTEIFETVSIQSCNSGEEPKVD 300
           EYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYLTEIFETVSIQSCNSGEEPKVD
Sbjct: 241 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYLTEIFETVSIQSCNSGEEPKVD 300

Query: 301 DYGRLGSEALYAFIYPNFMINRWALCDLYFLVVLLLNVCLINLGFYDRYGPWMDTNLVLP 360
           DYGRLGSEALYAFIYPNFMINRWALCDLYFLVVLLLNVCLINLGFYDRYGPWMDTNLVLP
Sbjct: 301 DYGRLGSEALYAFIYPNFMINRWALCDLYFLVVLLLNVCLINLGFYDRYGPWMDTNLVLP 360

Query: 361 LGPRKCLVVFDYFLEAPFKNDNSFIQKSLEDSERVQNEDIILCEGVQRGLESPAYKFGRY 420
           LGPRKCLVVFDYFLEAPFKNDNSFIQKSLEDSERVQNEDIILCEGVQRGLESPAYKFGRY
Sbjct: 361 LGPRKCLVVFDYFLEAPFKNDNSFIQKSLEDSERVQNEDIILCEGVQRGLESPAYKFGRY 420

Query: 421 APSVENAMHHFHRLLHLNLTK 442
           APSVENAMHHFHR LHLNLTK
Sbjct: 421 APSVENAMHHFHRRLHLNLTK 441

[Close]

BLAST of MS002206.1 vs. ExPASy TrEMBL
Match: A0A6J1C1T8 (Choline monooxygenase, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111007490 PE=3 SV=1)

HSP 1 Score: 862.4 bits (2227), Expect = 7.9e-247
Identity = 412/441 (93.42%), Postives = 413/441 (93.65%), Query Frame = 0


Query: 1   MATIIKQIPTHFFQPPGIATPSINHRPSMPISAVSTFRNPDSRFVEAQKLVHEFDPEIPL 60
           MATIIKQIPTHFFQPPGIATPSINHRPSMPISAVSTFRNPDSRFVEAQKLVHEFDPEIPL
Sbjct: 1   MATIIKQIPTHFFQPPGIATPSINHRPSMPISAVSTFRNPDSRFVEAQKLVHEFDPEIPL 60

Query: 61  EKALTPPSSWYTDPSFFALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNVEFVVCKDN 120
           EKALTPPSSWYTDPSFF LELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNVEFVVCKDN
Sbjct: 61  EKALTPPSSWYTDPSFFTLELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNVEFVVCKDN 120

Query: 121 NGKVRAFHNVCRHHASLLASGSGKKSCFVCPYHGWTYGLDGVLLKATRIKGIQNFDVNDF 180
           NGKVRAFHNVCRHHASLLASGSGKKSCFVCPYHGWTYGLDGVLLKATRIKGIQNFDVNDF
Sbjct: 121 NGKVRAFHNVCRHHASLLASGSGKKSCFVCPYHGWTYGLDGVLLKATRIKGIQNFDVNDF 180

Query: 181 GLIPLLVATWGPFVLLNLDKELPSEQEVDEDKVAREWLGSCLDVLSLNGVNTSLSYVCRR 240
           GLIPLLVATWGPFVLLNLDKELPSEQEVDEDKVAREWLGSC+DVLSLNGVNTSLSYVCRR
Sbjct: 181 GLIPLLVATWGPFVLLNLDKELPSEQEVDEDKVAREWLGSCVDVLSLNGVNTSLSYVCRR 240

Query: 241 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYLTEIFETVSIQSCNSGEEPKVD 300
           EYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYLTEIFETVSIQSCNSGEEPKVD
Sbjct: 241 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYLTEIFETVSIQSCNSGEEPKVD 300

Query: 301 DYGRLGSEALYAFIYPNFMINRWALCDLYFLVVLLLNVCLINLGFYDRYGPWMDTNLVLP 360
           DYGRLGSEALYAFIYPNFMIN                          RYGPWMDTNLVLP
Sbjct: 301 DYGRLGSEALYAFIYPNFMIN--------------------------RYGPWMDTNLVLP 360

Query: 361 LGPRKCLVVFDYFLEAPFKNDNSFIQKSLEDSERVQNEDIILCEGVQRGLESPAYKFGRY 420
           LGPRKCLVVFDYFLEAPFKNDNSFIQKSLEDSERVQNEDIILCEGVQRGLESPAYKFGRY
Sbjct: 361 LGPRKCLVVFDYFLEAPFKNDNSFIQKSLEDSERVQNEDIILCEGVQRGLESPAYKFGRY 415

Query: 421 APSVENAMHHFHRLLHLNLTK 442
           APSVENAMHHFHR LHLNLTK
Sbjct: 421 APSVENAMHHFHRRLHLNLTK 415

[Close]

BLAST of MS002206.1 vs. ExPASy TrEMBL
Match: A0A6J1JIK0 (Choline monooxygenase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111484916 PE=3 SV=1)

HSP 1 Score: 742.3 bits (1915), Expect = 1.2e-210
Identity = 361/451 (80.04%), Postives = 381/451 (84.48%), Query Frame = 0


Query: 1   MATIIKQIPTHFFQP--PGIATPSINHRPSMPISAVSTFRNPDSRFVEAQKLVHEFDPEI 60
           MA + K I THFFQP        S +HR    IS   +FRN DS F+EA KLV EFDPEI
Sbjct: 1   MAALTKHIHTHFFQPLFASFNFQSRSHRSPTRISPTLSFRNSDSHFIEALKLVDEFDPEI 60

Query: 61  PLEKALTPPSSWYTDPSFFALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNVEFVVCK 120
           PLEKA+TPPSSWYTDPSFFALELDRVF+RGWQAVGYVEQLKDPHDFFTGRLGNVE+VVCK
Sbjct: 61  PLEKAVTPPSSWYTDPSFFALELDRVFHRGWQAVGYVEQLKDPHDFFTGRLGNVEYVVCK 120

Query: 121 DNNGKVRAFHNVCRHHASLLASGSGKKSCFVCPYHGWTYGLDGVLLKATRIKGIQNFDVN 180
           DNN KVRAFHNVCRHHASLLASG GKKSCFVCPYHGWTYGLDG LLKATRI GIQNFDVN
Sbjct: 121 DNNKKVRAFHNVCRHHASLLASGCGKKSCFVCPYHGWTYGLDGGLLKATRINGIQNFDVN 180

Query: 181 DFGLIPLLVATWGPFVLLNLDKELPSEQEVDEDKVAREWLGSCLDVLSLNGVNTSLSYVC 240
           DFGL+PL VATWGPFVLLN+D++L SE  VDEDKVA EWLGSC D+LSLNGV+ SLS+VC
Sbjct: 181 DFGLVPLPVATWGPFVLLNMDEKLSSELVVDEDKVAYEWLGSCADLLSLNGVDASLSFVC 240

Query: 241 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYLTEIFETVSIQSCNSGEEPK 300
           RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESY TEIFE VSIQSC  G E K
Sbjct: 241 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYSTEIFEAVSIQSCKGGGESK 300

Query: 301 VDDYGRLGSEALYAFIYPNFMINRW--------ALCDLYFLVVLLLNVCLINLGFYDRYG 360
            DDYGRLG EALYAF+YPNFMINR+        AL    F  V LL       G Y+RYG
Sbjct: 301 GDDYGRLGPEALYAFVYPNFMINRYFLDTSTYLALWLFMFRDVFLLMFVSSFSGLYNRYG 360

Query: 361 PWMDTNLVLPLGPRKCLVVFDYFLEAPFKNDNSFIQKSLEDSERVQNEDIILCEGVQRGL 420
           PWMDTNLVLPLGP+KCLVVFDYFLE PFKND SFIQ+SLEDSE VQ EDIILCEGVQ+GL
Sbjct: 361 PWMDTNLVLPLGPQKCLVVFDYFLETPFKNDESFIQQSLEDSESVQIEDIILCEGVQKGL 420

Query: 421 ESPAYKFGRYAPSVENAMHHFHRLLHLNLTK 442
           ESPAYKFGRYAPSVENAMHHFHRLLHLNLTK
Sbjct: 421 ESPAYKFGRYAPSVENAMHHFHRLLHLNLTK 451

[Close]

BLAST of MS002206.1 vs. ExPASy TrEMBL
Match: A0A5A7UY48 (Choline monooxygenase, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold542G00540 PE=3 SV=1)

HSP 1 Score: 734.6 bits (1895), Expect = 2.5e-208
Identity = 352/443 (79.46%), Postives = 374/443 (84.42%), Query Frame = 0


Query: 1   MATIIKQIPTHFFQPPGIA--TPSINHRPSMPISAVSTFRNPDSRFVEAQKLVHEFDPEI 60
           MAT+ K I  HFFQPP I+      NHR    ISA  +FR+PDSRF+EA+KLV +FDPEI
Sbjct: 1   MATLTKHIQIHFFQPPSISFNFHFCNHRSPSRISASLSFRSPDSRFIEARKLVDDFDPEI 60

Query: 61  PLEKALTPPSSWYTDPSFFALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNVEFVVCK 120
           PLEKALTPPSSWY DPSFFALELDRVFYRGWQAVGYVEQLKD HDFFTGRLGNVE+VVCK
Sbjct: 61  PLEKALTPPSSWYIDPSFFALELDRVFYRGWQAVGYVEQLKDAHDFFTGRLGNVEYVVCK 120

Query: 121 DNNGKVRAFHNVCRHHASLLASGSGKKSCFVCPYHGWTYGLDGVLLKATRIKGIQNFDVN 180
           DNN KVRAFHNVCRHHASLLA+G GKKSCFVCPYHGWTYGLDG+LLKATRI GIQNF+ N
Sbjct: 121 DNNRKVRAFHNVCRHHASLLATGCGKKSCFVCPYHGWTYGLDGILLKATRINGIQNFNEN 180

Query: 181 DFGLIPLLVATWGPFVLLNLDKELPSEQEVDEDKVAREWLGSCLDVLSLNGVNTSLSYVC 240
           DFGL+PL VA WGPFVLLNLD +L S+ +VDEDKVAREWLG+C DVL LNGV+ SLSYVC
Sbjct: 181 DFGLVPLPVAMWGPFVLLNLDGKLSSKPDVDEDKVAREWLGTCADVLRLNGVDASLSYVC 240

Query: 241 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYLTEIFETVSIQSCNSGEEPK 300
           RREYTI+CNWKVFCDNYLDGGYHVPYAHKGLASNL LESY TE+FETVSIQSC  G E K
Sbjct: 241 RREYTIDCNWKVFCDNYLDGGYHVPYAHKGLASNLNLESYSTELFETVSIQSCKGGGESK 300

Query: 301 VDDYGRLGSEALYAFIYPNFMINRWALCDLYFLVVLLLNVCLINLGFYDRYGPWMDTNLV 360
            DDYGRLG EALYAFIYPNFMIN                          RYGPWMDTNLV
Sbjct: 301 GDDYGRLGPEALYAFIYPNFMIN--------------------------RYGPWMDTNLV 360

Query: 361 LPLGPRKCLVVFDYFLEAPFKNDNSFIQKSLEDSERVQNEDIILCEGVQRGLESPAYKFG 420
           LPLGPRKCLVVFDYFLEA FKND+SFIQ+SLEDSE VQNEDIILCEGVQ+GLESPAYKFG
Sbjct: 361 LPLGPRKCLVVFDYFLEASFKNDDSFIQQSLEDSESVQNEDIILCEGVQKGLESPAYKFG 417

Query: 421 RYAPSVENAMHHFHRLLHLNLTK 442
           RYAPSVENAMHHFHRLLH NLTK
Sbjct: 421 RYAPSVENAMHHFHRLLHRNLTK 417

[Close]

BLAST of MS002206.1 vs. ExPASy TrEMBL
Match: A0A1S3B9A0 (Choline monooxygenase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487183 PE=3 SV=1)

HSP 1 Score: 734.6 bits (1895), Expect = 2.5e-208
Identity = 352/443 (79.46%), Postives = 374/443 (84.42%), Query Frame = 0


Query: 1   MATIIKQIPTHFFQPPGIA--TPSINHRPSMPISAVSTFRNPDSRFVEAQKLVHEFDPEI 60
           MAT+ K I  HFFQPP I+      NHR    ISA  +FR+PDSRF+EA+KLV +FDPEI
Sbjct: 1   MATLTKHIQIHFFQPPSISFNFHFCNHRSPSRISASLSFRSPDSRFIEARKLVDDFDPEI 60

Query: 61  PLEKALTPPSSWYTDPSFFALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNVEFVVCK 120
           PLEKALTPPSSWY DPSFFALELDRVFYRGWQAVGYVEQLKD HDFFTGRLGNVE+VVCK
Sbjct: 61  PLEKALTPPSSWYIDPSFFALELDRVFYRGWQAVGYVEQLKDAHDFFTGRLGNVEYVVCK 120

Query: 121 DNNGKVRAFHNVCRHHASLLASGSGKKSCFVCPYHGWTYGLDGVLLKATRIKGIQNFDVN 180
           DNN KVRAFHNVCRHHASLLA+G GKKSCFVCPYHGWTYGLDG+LLKATRI GIQNF+ N
Sbjct: 121 DNNRKVRAFHNVCRHHASLLATGCGKKSCFVCPYHGWTYGLDGILLKATRINGIQNFNEN 180

Query: 181 DFGLIPLLVATWGPFVLLNLDKELPSEQEVDEDKVAREWLGSCLDVLSLNGVNTSLSYVC 240
           DFGL+PL VA WGPFVLLNLD +L S+ +VDEDKVAREWLG+C DVL LNGV+ SLSYVC
Sbjct: 181 DFGLVPLPVAMWGPFVLLNLDGKLSSKPDVDEDKVAREWLGTCADVLRLNGVDASLSYVC 240

Query: 241 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYLTEIFETVSIQSCNSGEEPK 300
           RREYTI+CNWKVFCDNYLDGGYHVPYAHKGLASNL LESY TE+FETVSIQSC  G E K
Sbjct: 241 RREYTIDCNWKVFCDNYLDGGYHVPYAHKGLASNLNLESYSTELFETVSIQSCKGGGESK 300

Query: 301 VDDYGRLGSEALYAFIYPNFMINRWALCDLYFLVVLLLNVCLINLGFYDRYGPWMDTNLV 360
            DDYGRLG EALYAFIYPNFMIN                          RYGPWMDTNLV
Sbjct: 301 GDDYGRLGPEALYAFIYPNFMIN--------------------------RYGPWMDTNLV 360

Query: 361 LPLGPRKCLVVFDYFLEAPFKNDNSFIQKSLEDSERVQNEDIILCEGVQRGLESPAYKFG 420
           LPLGPRKCLVVFDYFLEA FKND+SFIQ+SLEDSE VQNEDIILCEGVQ+GLESPAYKFG
Sbjct: 361 LPLGPRKCLVVFDYFLEASFKNDDSFIQQSLEDSESVQNEDIILCEGVQKGLESPAYKFG 417

Query: 421 RYAPSVENAMHHFHRLLHLNLTK 442
           RYAPSVENAMHHFHRLLH NLTK
Sbjct: 421 RYAPSVENAMHHFHRLLHRNLTK 417

[Close]

BLAST of MS002206.1 vs. TAIR 10
Match: AT4G29890.1 (choline monooxygenase, putative (CMO-like) )

HSP 1 Score: 542.0 bits (1395), Expect = 4.6e-154
Identity = 259/406 (63.79%), Postives = 302/406 (74.38%), Query Frame = 0


Query: 37  FRNPDSRFV--EAQKLVHEFDPEIPLEKALTPPSSWYTDPSFFALELDRVFYRGWQAVGY 96
           F NP   F   +  KLV EFDP+IPLE+A TPPSSWYTDP F++ ELDRVFY GWQAVGY
Sbjct: 42  FHNPTRVFAVSDISKLVTEFDPKIPLERASTPPSSWYTDPQFYSFELDRVFYGGWQAVGY 101

Query: 97  VEQLKDPHDFFTGRLGNVEFVVCKDNNGKVRAFHNVCRHHASLLASGSGKKSCFVCPYHG 156
            +Q+K+  DFFTGRLG+V+FVVC+D NGK+ AFHNVC HHAS+LASG+G+KSCFVC YHG
Sbjct: 102 SDQIKESRDFFTGRLGDVDFVVCRDENGKIHAFHNVCSHHASILASGNGRKSCFVCLYHG 161

Query: 157 WTYGLDGVLLKATRIKGIQNFDVNDFGLIPLLVATWGPFVLLNLDKELPSEQEVDEDK-V 216
           WTY L G L+KATR+ GIQNF +++ GL PL VA WGPFVLL +      + EV+ D+ V
Sbjct: 162 WTYSLSGSLVKATRMSGIQNFSLSEMGLKPLRVAVWGPFVLLKVTAATSRKGEVETDELV 221

Query: 217 AREWLGSCLDVLSLNGVNTSLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNL 276
           A EWLG+ +  LS  GV++ LSY+CRREYTI+CNWKVFCDNYLDGGYHVPYAHKGL S L
Sbjct: 222 ASEWLGTSVGRLSQGGVDSPLSYICRREYTIDCNWKVFCDNYLDGGYHVPYAHKGLMSGL 281

Query: 277 KLESYLTEIFETVSIQSCNSGEEPKVDDYGRLGSEALYAFIYPNFMINRWALCDLYFLVV 336
            LE+Y T IFE VSIQ C  G +   D + RLGSEALYAF+YPNFMIN            
Sbjct: 282 DLETYSTTIFEKVSIQECGGGSKVGEDGFDRLGSEALYAFVYPNFMIN------------ 341

Query: 337 LLLNVCLINLGFYDRYGPWMDTNLVLPLGPRKCLVVFDYFLEAPFKNDNSFIQKSLEDSE 396
                         RYGPWMDTNLVLPLGPRKC VVFDYFL+   K+D +FI++SLE+S+
Sbjct: 342 --------------RYGPWMDTNLVLPLGPRKCKVVFDYFLDPSLKDDEAFIKRSLEESD 401

Query: 397 RVQNEDIILCEGVQRGLESPAYKFGRYAPSVENAMHHFHRLLHLNL 440
           RVQ ED++LCE VQRGLES AY  GRYA  VE  MHHFH LLH NL
Sbjct: 402 RVQMEDVMLCESVQRGLESQAYDKGRYA-LVEKPMHHFHCLLHHNL 420

[Close]

BLAST of MS002206.1 vs. TAIR 10
Match: AT1G44446.1 (Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain )

HSP 1 Score: 47.8 bits (112), Expect = 2.7e-05
Identity = 26/83 (31.33%), Postives = 33/83 (39.76%), Query Frame = 0


Query: 89  WQAVGYVEQLKDPHDFFTG-RLGNVEFVVCKDNNGKVRAFHNVCRHHASLLASGSGKKSC 148
           W  V +   LK  HD           +V+ +  +GK     N C H A  L  G+  +  
Sbjct: 221 WYPVAFTADLK--HDTMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGR 280

Query: 149 FVCPYHGWTYGLDGVLLKATRIK 171
             CPYHGW Y  DG   K    K
Sbjct: 281 IQCPYHGWEYSTDGECKKMPSTK 301

[Close]

BLAST of MS002206.1 vs. TAIR 10
Match: AT1G44446.2 (Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain )

HSP 1 Score: 47.8 bits (112), Expect = 2.7e-05
Identity = 26/83 (31.33%), Postives = 33/83 (39.76%), Query Frame = 0


Query: 89  WQAVGYVEQLKDPHDFFTG-RLGNVEFVVCKDNNGKVRAFHNVCRHHASLLASGSGKKSC 148
           W  V +   LK  HD           +V+ +  +GK     N C H A  L  G+  +  
Sbjct: 221 WYPVAFTADLK--HDTMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGR 280

Query: 149 FVCPYHGWTYGLDGVLLKATRIK 171
             CPYHGW Y  DG   K    K
Sbjct: 281 IQCPYHGWEYSTDGECKKMPSTK 301

[Close]

BLAST of MS002206.1 vs. TAIR 10
Match: AT1G44446.3 (Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain )

HSP 1 Score: 47.8 bits (112), Expect = 2.7e-05
Identity = 26/83 (31.33%), Postives = 33/83 (39.76%), Query Frame = 0


Query: 89  WQAVGYVEQLKDPHDFFTG-RLGNVEFVVCKDNNGKVRAFHNVCRHHASLLASGSGKKSC 148
           W  V +   LK  HD           +V+ +  +GK     N C H A  L  G+  +  
Sbjct: 221 WYPVAFTADLK--HDTMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGR 280

Query: 149 FVCPYHGWTYGLDGVLLKATRIK 171
             CPYHGW Y  DG   K    K
Sbjct: 281 IQCPYHGWEYSTDGECKKMPSTK 301

The following BLAST results are available for this feature:

BLAST of MS002206.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135573.1	2.4e-266	99.32	choline monooxygenase, chloroplastic isoform X1 [Momordica charantia]	[more]
XP_022135574.1	1.6e-246	93.42	choline monooxygenase, chloroplastic isoform X2 [Momordica charantia]	[more]
XP_022987329.1	2.5e-210	80.04	choline monooxygenase, chloroplastic isoform X1 [Cucurbita maxima]	[more]
XP_038880722.1	6.1e-209	80.36	choline monooxygenase, chloroplastic [Benincasa hispida]	[more]
XP_008443631.1	5.1e-208	79.46	PREDICTED: choline monooxygenase, chloroplastic isoform X2 [Cucumis melo] >KAA00...	[more]

BLAST of MS002206.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZR0	6.4e-153	63.79	Choline monooxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g2989...	[more]
Q93XE1	4.5e-122	49.65	Choline monooxygenase, chloroplastic OS=Amaranthus tricolor OX=29722 GN=CMO PE=2...	[more]
O22553	2.3e-118	47.20	Choline monooxygenase, chloroplastic OS=Beta vulgaris OX=161934 GN=CMO PE=2 SV=1	[more]
O04121	3.9e-118	47.33	Choline monooxygenase, chloroplastic OS=Spinacia oleracea OX=3562 GN=CMO PE=1 SV...	[more]
Q9LKN0	1.9e-117	47.56	Choline monooxygenase, chloroplastic OS=Atriplex hortensis OX=34272 GN=CMO PE=2 ...	[more]

BLAST of MS002206.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C563	1.2e-266	99.32	Choline monooxygenase, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1C1T8	7.9e-247	93.42	Choline monooxygenase, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1JIK0	1.2e-210	80.04	Choline monooxygenase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111484916...	[more]
A0A5A7UY48	2.5e-208	79.46	Choline monooxygenase, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3B9A0	2.5e-208	79.46	Choline monooxygenase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487183 PE=...	[more]

BLAST of MS002206.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29890.1	4.6e-154	63.79	choline monooxygenase, putative (CMO-like)	[more]
AT1G44446.1	2.7e-05	31.33	Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain	[more]
AT1G44446.2	2.7e-05	31.33	Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain	[more]
AT1G44446.3	2.7e-05	31.33	Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001663	Aromatic-ring-hydroxylating dioxygenase, alpha subunit	PRINTS	PR00090	RNGDIOXGNASE	coord: 103..118 score: 26.69 coord: 144..164 score: 44.74 coord: 73..98 score: 32.05 coord: 232..254 score: 23.01
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PFAM	PF00355	Rieske	coord: 89..168 e-value: 7.0E-17 score: 61.2
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PROSITE	PS51296	RIESKE	coord: 89..183 score: 25.653166
IPR015879	Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain	PFAM	PF00848	Ring_hydroxyl_A	coord: 239..273 e-value: 8.4E-9 score: 35.7 coord: 352..433 e-value: 1.9E-12 score: 47.6
None	No IPR available	GENE3D	3.90.380.10		coord: 338..441 e-value: 2.6E-19 score: 71.7 coord: 205..302 e-value: 1.7E-11 score: 46.0
None	No IPR available	PANTHER	PTHR43756:SF5	CHOLINE MONOOXYGENASE, CHLOROPLASTIC	coord: 46..324
None	No IPR available	PANTHER	PTHR43756:SF5	CHOLINE MONOOXYGENASE, CHLOROPLASTIC	coord: 346..441
None	No IPR available	CDD	cd08883	RHO_alpha_C_CMO-like	coord: 237..440 e-value: 2.05035E-85 score: 257.274
None	No IPR available	SUPERFAMILY	55961	Bet v1-like	coord: 216..435
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	GENE3D	2.102.10.10		coord: 86..204 e-value: 2.7E-31 score: 109.6
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	SUPERFAMILY	50022	ISP domain	coord: 51..200
IPR044637	Aromatic-ring-hydroxylating dioxygenase	PANTHER	PTHR43756	CHOLINE MONOOXYGENASE, CHLOROPLASTIC	coord: 46..324
IPR044637	Aromatic-ring-hydroxylating dioxygenase	PANTHER	PTHR43756	CHOLINE MONOOXYGENASE, CHLOROPLASTIC	coord: 346..441

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS002206	MS002206	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS002206.1-cds	MS002206.1-cds-scaffold30:3219248..3219524	CDS
MS002206.1-cds	MS002206.1-cds-scaffold30:3220163..3220208	CDS
MS002206.1-cds	MS002206.1-cds-scaffold30:3220434..3220569	CDS
MS002206.1-cds	MS002206.1-cds-scaffold30:3220827..3220901	CDS
MS002206.1-cds	MS002206.1-cds-scaffold30:3221005..3221217	CDS
MS002206.1-cds	MS002206.1-cds-scaffold30:3221408..3221503	CDS
MS002206.1-cds	MS002206.1-cds-scaffold30:3221727..3222020	CDS
MS002206.1-cds	MS002206.1-cds-scaffold30:3222217..3222267	CDS
MS002206.1-cds	MS002206.1-cds-scaffold30:3222370..3222504	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS002206.1	MS002206.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0005506	iron ion binding