MS002167.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS002167.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Location	scaffold30: 2910429 .. 2913983 (+)
Sequence length	651
RNA-Seq Expression	MS002167.1
Synteny	MS002167.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATTTTGACACATGGAAGTCCGAATTTCAGAATTTTCTGTGAAAGGGAGGGGAGCTTGTTTTTAGGTATTTCTGCTGCTCCAGTTTTGCCTCAGAGGGTGGGAGTTTACGGGCATTTTGTGAAAGGTTAGTCAATTTTACCTGTCTTTTTTTAAGTTCTTGGACTTTTCTTTGCGTGGTTGTTGATTGGAAATTCTGAACTAAGTTGAATGTGTTATGCATGATTTGCTAATTGTTCTAGAGAAAGTAAGAGTTTCAATCTCTCTACTATTTATTTTATTCACCGATATTGTTGTCTTCGTTTGGCAATTTAAAGAGAGAGTATAAAAAATTATGGTATGACTTTAAACATTAAATAATGGAACACAAGTTGGTGGAATAATAATAGTGAAGAATATAGATTGCCTGTCAATCTCTTCACATTGACAACTCCCAATAGACTTTGTTAAAAAATCCGATTTGTTCGATGGCCTTTCGACATGTATGCTCAACATAGTCTCGTCCCCGTATAGAAGTGCCATATTTTCGTTGACATGATTTTTATGTCTATATTCCCTTGGTATTGACCACCCTGTAAAGTTGATTTATGCAGTTTGAAGACTGATGGTACATACCGTCAGGATTTTAAGATGGAATAAAAGGGATTTGACATAAATTACGAGCTAGAGAACATGTGCAGGAACAAAGATGGTCTTTCGTTTTTTATCTCTCTCTTTTAATTGGTGAAATAATCACGTTTAAGAAATGATTTACATCATCCTGTTATTTATATTGTTTAAAGTTCAAGCAGATTAGTCATAAATTCTTATGATTTGTTATGGAATCATGATCGATACTTTTATGTTTGAATGAAAACACCAAACATTTTCATTAAGGGAATGAAAAGATAGGAAATGAGGGGAGAACCATTTGTCCAAGAAATCTTATATAGAATTGCTCCAATTGGCTTACATCAAAAAAGAAGAATAATTACAAAAAAGTTTTGAGAGACTTCTCCAATTGGAAGCTACATAAGTAACTATGTTTAGAAATGCTTCAAAACCTCATCTGTAATCATTGAAAGTCCTTCTATTCCAATTTTTTTTTTTCTCTGTTCAGGGGACAAGTGGATAAAGGTGAATAAAGGGTAAATTTTTGCACATTGTCCATTGTTTTCACCTTTTCCAGCAATGGAGTTCAAATGTAGAATTTGGTTTTCTTGGAATTTTTCTCTTCCAAATATAGCTTGTTAGAAATGTGTTAGGTTTTGGACGAGGGGCTGAAAGGTGTTGGGATTAGGATTTGCAAGATAAATCCTGTGTTTTCGTGTAGTCACACTCTTTCATTCTTCAACCGAGGAGAGTTTAAAAGCAGCAGTCTTTCCCAGAAAGTTTGTTAAAGCCCATATCTCCTCTTCATTTAGAGTTTTTTGGAAGGCTTAATCCCATAACTCTATTTGTCCCAACAATCAACACTTGTACAGTTCCTTGGCCGTGTAGAGCTTAGCATGTTGATTGAGGAGGAGCATCCTGACGGCTAGATACTGTATTTACTTAATTTTAATCTCTATTTTATCAGTCTATTTTTTATAGTGTTATAGATGACTGGAAACTCTCCAAAACTCTAAACGGTTGTTGCTAGTATAATTTTATTGAAGAACGAATAAAACAAGCACTTTCGCAAAGTTATATTCAAGTCAATTGTGACTAGCAATTAAGTTGATCTATCATAAGAACTCCATTCAATTACCATATGATTGCTATATCCTTTTTTCGTCAGGGAGAGGAACTAGTCGAAGGTTGTCGAAGAAGGAACTCTGTGATTTCCCTGGGAAAGGATCCTTTGCCGCAAGGAACATTGTCTTCACTGTCCCTAGGGACAGTAGCTCTTCAAACACAAGCAGCAGCAGCAGCAAGGACGATCCTTCAAATCAATCCGAGGCAAGGCAACTATCTGTCGTGATTTTTTTCTCTCTGCATCAATGGATCTTCTTTTTACGATCTCTATTGGAGCAGTTGTGCATTATATATTATCTACTTCTTGAGTATATGGTGATTGCATTTATAAAAAGCTTAGCAGAGCAGATTCCAGCTGATTCACATGACACATGCAGTTTTTTGTTCCTACAAGGACAGTGCAATGATATTCTCCCTCTTTCTTCTGGGGTGGGGAGTGAGATGCTTTAGGGGGAACTAGTGCAGAAATTTCAGTTAGTATTTACTTGATTACTTGATCACACTTGCATAAATCTTGATGATAAAGGAGAGATGTCATTCGCTATGTGCATGGAAGTTAGTCGATATTTTTCTAGGGAGGACAAAATTTTACATTCTAACTTTTTTTATATTTAATTTTTCAATTCTAAAAATTATGGGAACAGAGAGGCATATTATATATTCTTTTTGTAGCCGGTGGGTGTAACAGACATTTTTTTCTGCAGCAAACACCTTTTGGTTACACGAGGAAGGATGTTTTATTCATTGGATTGGGCGTCACAATTCTTGGATTTGGGTTGAAAAGTGGATTAGAGGTACGTACTCAGATTTTTCACTTTTCCTTTTGATACTAATGCTCTGATTTATTTTGTTGTTTTTGGTCTTATATTTTAAAAAATTAAACTTATAAACATTACTACCTTTGTGTCTCATTGTTTTGTTATCTACTTTTTTTATAATATTTCCAAAAGTTAACCCAACTCTTAAAAACTAAAAAAGTAATATTAATCTTTTTTTATTATTTTATTATTTGAAAGTTGGCTCAGAATTGTATTTAAGAAAGGTGAAAAACATATTTCGAAATCGTAAGGAAGCAAGCATAATTTCTAAAAACAAAATCGTTATCAAAACGGACCTAACTCTTCCTCCCGTAAGAGATATTTGTTTATATATTTATTGATATTTGTTTATATATTTATAGAATTCCGAGGGTGAACTATCTCCCCCTCTTCTATACACTTCCATTAATTTTCTGGCTGCTCATTGGAGATAAAACTTTTCAGTTGCTCTTTTATTGTTCTATTCCAACGTTATTACTCCAAAGAACAAATCATATACCAGTACATTGTGCTTTTGCCTTTTAGTTCTGTGAAATTCATGCTGTTCACTTCTATTCACCAAATGTGTAATTTTTTTGTCTTGATATCTTGTGCAGTTTGCTGGGTATGATCCCATGCAAGCAGGCAACGTGGTCCAGCTTGTACTGGTTTTGGGCTTAACGCTTGGATGGATTTCCACGTACATGTTCAGAGTTTCAAACAAGGATATGACATATGCTCAACAACTACGTGATTACGAGGACAAAGTCATGCAGGTGTGATATGTGAATCACTTTTAAGAACGTAGAACCAAACATCAAACTGATTTTACTAAAATCACTTATTTTGAATGCACCCTGAAACGCATCTATAAAGTTCTTGACATTTCTGTTTTAGTTTTTCAATTACTTTCTCACTAACCTCAATTAATTTGTGTCTGTAGAAACGTCTGGAGAGCCTTACAGAAGCCGAGCTAGTAGCGTTGCTTGAACAAGTCGAGGAAGAGAAGAGCCAGTCAGCTAGTGGTGAGCAGGTCAAT

mRNA sequence

ATGGCGATTTTGACACATGGAAGTCCGAATTTCAGAATTTTCTGTGAAAGGGAGGGGAGCTTGTTTTTAGGTATTTCTGCTGCTCCAGTTTTGCCTCAGAGGGTGGGAGTTTACGGGCATTTTGTGAAAGGGAGAGGAACTAGTCGAAGGTTGTCGAAGAAGGAACTCTGTGATTTCCCTGGGAAAGGATCCTTTGCCGCAAGGAACATTGTCTTCACTGTCCCTAGGGACAGTAGCTCTTCAAACACAAGCAGCAGCAGCAGCAAGGACGATCCTTCAAATCAATCCGAGGCAAGGCAACTATCTCAAACACCTTTTGGTTACACGAGGAAGGATGTTTTATTCATTGGATTGGGCGTCACAATTCTTGGATTTGGGTTGAAAAGTGGATTAGAGTTTGCTGGGTATGATCCCATGCAAGCAGGCAACGTGGTCCAGCTTGTACTGGTTTTGGGCTTAACGCTTGGATGGATTTCCACGTACATGTTCAGAGTTTCAAACAAGGATATGACATATGCTCAACAACTACGTGATTACGAGGACAAAGTCATGCAGAAACGTCTGGAGAGCCTTACAGAAGCCGAGCTAGTAGCGTTGCTTGAACAAGTCGAGGAAGAGAAGAGCCAGTCAGCTAGTGGTGAGCAGGTCAAT

Coding sequence (CDS)

ATGGCGATTTTGACACATGGAAGTCCGAATTTCAGAATTTTCTGTGAAAGGGAGGGGAGCTTGTTTTTAGGTATTTCTGCTGCTCCAGTTTTGCCTCAGAGGGTGGGAGTTTACGGGCATTTTGTGAAAGGGAGAGGAACTAGTCGAAGGTTGTCGAAGAAGGAACTCTGTGATTTCCCTGGGAAAGGATCCTTTGCCGCAAGGAACATTGTCTTCACTGTCCCTAGGGACAGTAGCTCTTCAAACACAAGCAGCAGCAGCAGCAAGGACGATCCTTCAAATCAATCCGAGGCAAGGCAACTATCTCAAACACCTTTTGGTTACACGAGGAAGGATGTTTTATTCATTGGATTGGGCGTCACAATTCTTGGATTTGGGTTGAAAAGTGGATTAGAGTTTGCTGGGTATGATCCCATGCAAGCAGGCAACGTGGTCCAGCTTGTACTGGTTTTGGGCTTAACGCTTGGATGGATTTCCACGTACATGTTCAGAGTTTCAAACAAGGATATGACATATGCTCAACAACTACGTGATTACGAGGACAAAGTCATGCAGAAACGTCTGGAGAGCCTTACAGAAGCCGAGCTAGTAGCGTTGCTTGAACAAGTCGAGGAAGAGAAGAGCCAGTCAGCTAGTGGTGAGCAGGTCAAT

Protein sequence

MAILTHGSPNFRIFCEREGSLFLGISAAPVLPQRVGVYGHFVKGRGTSRRLSKKELCDFPGKGSFAARNIVFTVPRDSSSSNTSSSSSKDDPSNQSEARQLSQTPFGYTRKDVLFIGLGVTILGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSNKDMTYAQQLRDYEDKVMQKRLESLTEAELVALLEQVEEEKSQSASGEQVN

Homology

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BLAST of MS002167.1 vs. NCBI nr
Match: XP_022134582.1 (uncharacterized protein LOC111006814 [Momordica charantia])

HSP 1 Score: 403.7 bits (1036), Expect = 1.0e-108
Identity = 211/217 (97.24%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MAILTHGSPNFRIFCEREGSLFLGISAAPVLPQRVGVYGHFVKGRGTSRRLSKKELCDFP 60
           MAILTHGSPNFRIFCEREGSLFLGISAAPVLPQRVGVYGHFVKGRGTSRRLSKKELCDFP
Sbjct: 1   MAILTHGSPNFRIFCEREGSLFLGISAAPVLPQRVGVYGHFVKGRGTSRRLSKKELCDFP 60

Query: 61  GKGSFAARNIVFTVPRDSSSSNTSSSSSKDDPSNQSEARQLSQTPFGYTRKDVLFIGLGV 120
           GKGSFAARNIVFTVPRDSSSSNTSSSSSKDDPSNQSE     QTPFGYTRKDVLFIGLGV
Sbjct: 61  GKGSFAARNIVFTVPRDSSSSNTSSSSSKDDPSNQSE-----QTPFGYTRKDVLFIGLGV 120

Query: 121 TILGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSNKDMTYAQQLRDYE 180
           TILGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGW+STYMFRVSNKDMTYAQQLRDYE
Sbjct: 121 TILGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWVSTYMFRVSNKDMTYAQQLRDYE 180

Query: 181 DKVMQKRLESLTEAELVALLEQVEEEKSQSASGEQVN 218
           DKVMQKRLESLTEAELVALLEQVEEEKSQSASGEQVN
Sbjct: 181 DKVMQKRLESLTEAELVALLEQVEEEKSQSASGEQVN 212

[Close]

BLAST of MS002167.1 vs. NCBI nr
Match: KAG7021658.1 (hypothetical protein SDJN02_15384, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 349.0 bits (894), Expect = 3.0e-92
Identity = 181/217 (83.41%), Postives = 194/217 (89.40%), Query Frame = 0


Query: 1   MAILTHGSPNFRIFCEREGSLFLGISAAPVLPQRVGVYGHFVKGRGTSRRLSKKELCDFP 60
           MA+  HG PN RIFCEREG+LFLG SAAPVLPQR  VYGHF + RG+S+RLSKKE  DFP
Sbjct: 1   MAVFIHGIPNSRIFCEREGTLFLGFSAAPVLPQRARVYGHFARERGSSQRLSKKERIDFP 60

Query: 61  GKGSFAARNIVFTVPRDSSSSNTSSSSSKDDPSNQSEARQLSQTPFGYTRKDVLFIGLGV 120
            KG F  + +V TVPRDSSSSNT  SSS+DDP+NQS+ARQL QTPFGYTRKDVL IG GV
Sbjct: 61  TKGFFGTKRVVVTVPRDSSSSNT--SSSEDDPTNQSKARQLPQTPFGYTRKDVLLIGFGV 120

Query: 121 TILGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSNKDMTYAQQLRDYE 180
           T+LGFGLKSGLEFAG+DPMQAGNVVQLVLVLGLTL WISTYMFRVSNKDMTYAQQLRDYE
Sbjct: 121 TVLGFGLKSGLEFAGFDPMQAGNVVQLVLVLGLTLAWISTYMFRVSNKDMTYAQQLRDYE 180

Query: 181 DKVMQKRLESLTEAELVALLEQVEEEKSQSASGEQVN 218
           DKVM+KRLESLTEAELVALLEQVEEEKSQSASGEQVN
Sbjct: 181 DKVMEKRLESLTEAELVALLEQVEEEKSQSASGEQVN 215

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BLAST of MS002167.1 vs. NCBI nr
Match: XP_038880733.1 (uncharacterized protein LOC120072335 [Benincasa hispida])

HSP 1 Score: 344.4 bits (882), Expect = 7.4e-91
Identity = 181/217 (83.41%), Postives = 194/217 (89.40%), Query Frame = 0


Query: 1   MAILTHGSPNFRIFCEREGSLFLGISAAPVLPQRVGVYGHFVKGRGTSRRLSKKELCDFP 60
           MA+ THG  N RIFCEREG+LFLGISAAPVLPQR  VYGHF + RGTSRRLSKKE  DFP
Sbjct: 1   MAVFTHGCSNSRIFCEREGTLFLGISAAPVLPQRARVYGHFARERGTSRRLSKKEQLDFP 60

Query: 61  GKGSFAARNIVFTVPRDSSSSNTSSSSSKDDPSNQSEARQLSQTPFGYTRKDVLFIGLGV 120
            KG FA R +V TVPRDSSSSNT  S+SK+DP+NQSE     +TPFGYTRKDVL IGLGV
Sbjct: 61  RKGFFATRKVVLTVPRDSSSSNT--STSKEDPTNQSE-----RTPFGYTRKDVLLIGLGV 120

Query: 121 TILGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSNKDMTYAQQLRDYE 180
           T+LGFGLK+GLE+AGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVS+KDMTYAQQLRDYE
Sbjct: 121 TVLGFGLKTGLEYAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYE 180

Query: 181 DKVMQKRLESLTEAELVALLEQVEEEKSQSASGEQVN 218
           DKVMQKRLESLTEAEL+ALLEQVEEEKSQSASGEQVN
Sbjct: 181 DKVMQKRLESLTEAELIALLEQVEEEKSQSASGEQVN 210

[Close]

BLAST of MS002167.1 vs. NCBI nr
Match: XP_022925672.1 (uncharacterized protein LOC111433018 [Cucurbita moschata] >XP_022925678.1 uncharacterized protein LOC111433018 [Cucurbita moschata] >XP_022925687.1 uncharacterized protein LOC111433018 [Cucurbita moschata] >XP_022925697.1 uncharacterized protein LOC111433018 [Cucurbita moschata] >XP_022925705.1 uncharacterized protein LOC111433018 [Cucurbita moschata] >XP_022925714.1 uncharacterized protein LOC111433018 [Cucurbita moschata])

HSP 1 Score: 339.7 bits (870), Expect = 1.8e-89
Identity = 179/217 (82.49%), Postives = 191/217 (88.02%), Query Frame = 0


Query: 1   MAILTHGSPNFRIFCEREGSLFLGISAAPVLPQRVGVYGHFVKGRGTSRRLSKKELCDFP 60
           MA+ THG PN RIFCEREG+LFLG SAAPVLPQR  VYGHF + RG+S RLSKKE  DFP
Sbjct: 1   MAVFTHGIPNSRIFCEREGTLFLGFSAAPVLPQRARVYGHFARERGSSERLSKKERIDFP 60

Query: 61  GKGSFAARNIVFTVPRDSSSSNTSSSSSKDDPSNQSEARQLSQTPFGYTRKDVLFIGLGV 120
            KG F  + +V TVPRDSSSSNT  SSS+DDP+NQS+     QTPFGYTRKDVL IGLGV
Sbjct: 61  TKGFFGTKRVVVTVPRDSSSSNT--SSSEDDPTNQSK-----QTPFGYTRKDVLLIGLGV 120

Query: 121 TILGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSNKDMTYAQQLRDYE 180
           T+LGFGLKSGLEFAG+DPMQAGNVVQLVLVLGLTL WISTYMFRVSNKDMTYAQQLRDYE
Sbjct: 121 TVLGFGLKSGLEFAGFDPMQAGNVVQLVLVLGLTLAWISTYMFRVSNKDMTYAQQLRDYE 180

Query: 181 DKVMQKRLESLTEAELVALLEQVEEEKSQSASGEQVN 218
           DKVM+KRLESLTEAELVALLEQVEEEKSQSASGEQVN
Sbjct: 181 DKVMEKRLESLTEAELVALLEQVEEEKSQSASGEQVN 210

[Close]

BLAST of MS002167.1 vs. NCBI nr
Match: KAG6587693.1 (Serine/threonine-protein kinase 11-interacting protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 336.3 bits (861), Expect = 2.0e-88
Identity = 177/217 (81.57%), Postives = 190/217 (87.56%), Query Frame = 0


Query: 1   MAILTHGSPNFRIFCEREGSLFLGISAAPVLPQRVGVYGHFVKGRGTSRRLSKKELCDFP 60
           MA+  HG PN RIFCEREG+LFLG SAAPVLPQR  VYGHF + RG+S+RLSKKE  DFP
Sbjct: 21  MAVFIHGIPNSRIFCEREGTLFLGFSAAPVLPQRARVYGHFARERGSSQRLSKKERIDFP 80

Query: 61  GKGSFAARNIVFTVPRDSSSSNTSSSSSKDDPSNQSEARQLSQTPFGYTRKDVLFIGLGV 120
            KG F  + +V TVPRDSSSSNT  SSS+DDP+NQS+     QTPFGYTRKDVL IGLGV
Sbjct: 81  TKGFFGTKRVVVTVPRDSSSSNT--SSSEDDPTNQSK-----QTPFGYTRKDVLLIGLGV 140

Query: 121 TILGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSNKDMTYAQQLRDYE 180
           T+LGFGLKSGLEFAG+DPMQAGNVVQLVLVLGLTL WISTYMFRVSNKDMTYAQQLRDYE
Sbjct: 141 TVLGFGLKSGLEFAGFDPMQAGNVVQLVLVLGLTLAWISTYMFRVSNKDMTYAQQLRDYE 200

Query: 181 DKVMQKRLESLTEAELVALLEQVEEEKSQSASGEQVN 218
           DKVM+KRLESLTEAELVALLEQVEEEKSQSASGEQ N
Sbjct: 201 DKVMEKRLESLTEAELVALLEQVEEEKSQSASGEQTN 230

[Close]

BLAST of MS002167.1 vs. ExPASy TrEMBL
Match: A0A6J1C000 (uncharacterized protein LOC111006814 OS=Momordica charantia OX=3673 GN=LOC111006814 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 5.0e-109
Identity = 211/217 (97.24%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MAILTHGSPNFRIFCEREGSLFLGISAAPVLPQRVGVYGHFVKGRGTSRRLSKKELCDFP 60
           MAILTHGSPNFRIFCEREGSLFLGISAAPVLPQRVGVYGHFVKGRGTSRRLSKKELCDFP
Sbjct: 1   MAILTHGSPNFRIFCEREGSLFLGISAAPVLPQRVGVYGHFVKGRGTSRRLSKKELCDFP 60

Query: 61  GKGSFAARNIVFTVPRDSSSSNTSSSSSKDDPSNQSEARQLSQTPFGYTRKDVLFIGLGV 120
           GKGSFAARNIVFTVPRDSSSSNTSSSSSKDDPSNQSE     QTPFGYTRKDVLFIGLGV
Sbjct: 61  GKGSFAARNIVFTVPRDSSSSNTSSSSSKDDPSNQSE-----QTPFGYTRKDVLFIGLGV 120

Query: 121 TILGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSNKDMTYAQQLRDYE 180
           TILGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGW+STYMFRVSNKDMTYAQQLRDYE
Sbjct: 121 TILGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWVSTYMFRVSNKDMTYAQQLRDYE 180

Query: 181 DKVMQKRLESLTEAELVALLEQVEEEKSQSASGEQVN 218
           DKVMQKRLESLTEAELVALLEQVEEEKSQSASGEQVN
Sbjct: 181 DKVMQKRLESLTEAELVALLEQVEEEKSQSASGEQVN 212

[Close]

BLAST of MS002167.1 vs. ExPASy TrEMBL
Match: A0A6J1EFX7 (uncharacterized protein LOC111433018 OS=Cucurbita moschata OX=3662 GN=LOC111433018 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 8.8e-90
Identity = 179/217 (82.49%), Postives = 191/217 (88.02%), Query Frame = 0


Query: 1   MAILTHGSPNFRIFCEREGSLFLGISAAPVLPQRVGVYGHFVKGRGTSRRLSKKELCDFP 60
           MA+ THG PN RIFCEREG+LFLG SAAPVLPQR  VYGHF + RG+S RLSKKE  DFP
Sbjct: 1   MAVFTHGIPNSRIFCEREGTLFLGFSAAPVLPQRARVYGHFARERGSSERLSKKERIDFP 60

Query: 61  GKGSFAARNIVFTVPRDSSSSNTSSSSSKDDPSNQSEARQLSQTPFGYTRKDVLFIGLGV 120
            KG F  + +V TVPRDSSSSNT  SSS+DDP+NQS+     QTPFGYTRKDVL IGLGV
Sbjct: 61  TKGFFGTKRVVVTVPRDSSSSNT--SSSEDDPTNQSK-----QTPFGYTRKDVLLIGLGV 120

Query: 121 TILGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSNKDMTYAQQLRDYE 180
           T+LGFGLKSGLEFAG+DPMQAGNVVQLVLVLGLTL WISTYMFRVSNKDMTYAQQLRDYE
Sbjct: 121 TVLGFGLKSGLEFAGFDPMQAGNVVQLVLVLGLTLAWISTYMFRVSNKDMTYAQQLRDYE 180

Query: 181 DKVMQKRLESLTEAELVALLEQVEEEKSQSASGEQVN 218
           DKVM+KRLESLTEAELVALLEQVEEEKSQSASGEQVN
Sbjct: 181 DKVMEKRLESLTEAELVALLEQVEEEKSQSASGEQVN 210

[Close]

BLAST of MS002167.1 vs. ExPASy TrEMBL
Match: A0A6J1IDW5 (uncharacterized protein LOC111471752 OS=Cucurbita maxima OX=3661 GN=LOC111471752 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.7e-88
Identity = 177/217 (81.57%), Postives = 191/217 (88.02%), Query Frame = 0


Query: 1   MAILTHGSPNFRIFCEREGSLFLGISAAPVLPQRVGVYGHFVKGRGTSRRLSKKELCDFP 60
           MA+ THG PN RIFCEREG+LFLG SAAPVLPQR  VY HF + RG+S+RLSKKE  DFP
Sbjct: 1   MAVFTHGIPNSRIFCEREGTLFLGFSAAPVLPQRARVYRHFARERGSSQRLSKKEPIDFP 60

Query: 61  GKGSFAARNIVFTVPRDSSSSNTSSSSSKDDPSNQSEARQLSQTPFGYTRKDVLFIGLGV 120
            KG F  + +V TVPRDSSSSN  +SSS+DDP+NQS+     QTPFGYTRKDVL IGLGV
Sbjct: 61  TKGFFGTKKVVLTVPRDSSSSN--ASSSEDDPTNQSK-----QTPFGYTRKDVLLIGLGV 120

Query: 121 TILGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSNKDMTYAQQLRDYE 180
           T+LGFGLKSGLEFAG+DPMQAGNVVQLVLVLGLTL WISTYMFRVSNKDMTYAQQLRDYE
Sbjct: 121 TVLGFGLKSGLEFAGFDPMQAGNVVQLVLVLGLTLAWISTYMFRVSNKDMTYAQQLRDYE 180

Query: 181 DKVMQKRLESLTEAELVALLEQVEEEKSQSASGEQVN 218
           DKVM+KRLESLTEAELVALLEQVEEEKSQSASGEQVN
Sbjct: 181 DKVMEKRLESLTEAELVALLEQVEEEKSQSASGEQVN 210

[Close]

BLAST of MS002167.1 vs. ExPASy TrEMBL
Match: A0A1S3BX71 (uncharacterized protein LOC103494194 OS=Cucumis melo OX=3656 GN=LOC103494194 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 4.8e-88
Identity = 179/217 (82.49%), Postives = 190/217 (87.56%), Query Frame = 0


Query: 1   MAILTHGSPNFRIFCEREGSLFLGISAAPVLPQRVGVYGHFVKGRGTSRRLSKKELCDFP 60
           MA+ THG  NFRIF EREG+LFLGISAAPVLPQ   VYG F + RGTSRRLSKKE  DFP
Sbjct: 1   MAVFTHGCSNFRIFSEREGTLFLGISAAPVLPQSARVYGQFARERGTSRRLSKKEQLDFP 60

Query: 61  GKGSFAARNIVFTVPRDSSSSNTSSSSSKDDPSNQSEARQLSQTPFGYTRKDVLFIGLGV 120
            KG FA R +V TVP+DSSSSNTSSS+  +DP+NQSE     QTPFGYTRKDVL IGLGV
Sbjct: 61  RKGFFATRKVVLTVPKDSSSSNTSSSN--EDPTNQSE-----QTPFGYTRKDVLLIGLGV 120

Query: 121 TILGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSNKDMTYAQQLRDYE 180
           T+LGFGLKSGLE+AGYD MQAGNVVQLVLVLGLTLGWISTYMFRVS+KDMTYAQQLRDYE
Sbjct: 121 TVLGFGLKSGLEYAGYDSMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYE 180

Query: 181 DKVMQKRLESLTEAELVALLEQVEEEKSQSASGEQVN 218
           DKVMQKRLESLTEAELVALLEQVEEEKSQSAS EQVN
Sbjct: 181 DKVMQKRLESLTEAELVALLEQVEEEKSQSASSEQVN 210

[Close]

BLAST of MS002167.1 vs. ExPASy TrEMBL
Match: A0A0A0LPZ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025200 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 2.0e-86
Identity = 177/217 (81.57%), Postives = 188/217 (86.64%), Query Frame = 0


Query: 1   MAILTHGSPNFRIFCEREGSLFLGISAAPVLPQRVGVYGHFVKGRGTSRRLSKKELCDFP 60
           MA+ T G  N RIF EREG+LFLGISAAPVLPQ   VYGHF + RGTSRRLSKKE  DFP
Sbjct: 1   MAVFTLGCSNSRIFSEREGTLFLGISAAPVLPQSARVYGHFARERGTSRRLSKKEQIDFP 60

Query: 61  GKGSFAARNIVFTVPRDSSSSNTSSSSSKDDPSNQSEARQLSQTPFGYTRKDVLFIGLGV 120
            KG F  R +V TVP+DSSSSNTSSS+  DD +NQ+E     QTPFGYTRKDVL IGLGV
Sbjct: 61  RKGFFGTRKVVLTVPKDSSSSNTSSSN--DDSTNQTE-----QTPFGYTRKDVLLIGLGV 120

Query: 121 TILGFGLKSGLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSNKDMTYAQQLRDYE 180
           T+LGFGLKSGLE+AGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVS+KDMTYAQQLRDYE
Sbjct: 121 TVLGFGLKSGLEYAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYE 180

Query: 181 DKVMQKRLESLTEAELVALLEQVEEEKSQSASGEQVN 218
           DKVMQKRLESLTEAELVALLEQVEEEKSQSAS EQVN
Sbjct: 181 DKVMQKRLESLTEAELVALLEQVEEEKSQSASSEQVN 210

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BLAST of MS002167.1 vs. TAIR 10
Match: AT3G17930.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3007 (InterPro:IPR021562); Has 236 Blast hits to 236 proteins in 83 species: Archae - 0; Bacteria - 117; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). )

HSP 1 Score: 167.9 bits (424), Expect = 8.8e-42
Identity = 85/123 (69.11%), Postives = 101/123 (82.11%), Query Frame = 0


Query: 87  SSKDDPSNQSEARQLSQTPFGYTRKDVLFIGLGVTILGFGLKSGLEFAGYDPMQAGNVVQ 146
           SS    +    A +   TPFGYTRKDV+ IG+GVT LG GL+SGLE+ G DP+QAGN VQ
Sbjct: 66  SSNSTETEDDSATKTKTTPFGYTRKDVILIGVGVTALGIGLESGLEYVGVDPLQAGNAVQ 125

Query: 147 LVLVLGLTLGWISTYMFRVSNKDMTYAQQLRDYEDKVMQKRLESLTEAELVALLEQVEEE 206
           L+LVLGLTLGWISTY+FRV NK+MTYAQQLRDYE +VMQKRLESL+EAEL AL+ QV+EE
Sbjct: 126 LILVLGLTLGWISTYIFRVGNKEMTYAQQLRDYESQVMQKRLESLSEAELEALMAQVDEE 185

Query: 207 KSQ 210
           K++
Sbjct: 186 KTK 188

The following BLAST results are available for this feature:

BLAST of MS002167.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134582.1	1.0e-108	97.24	uncharacterized protein LOC111006814 [Momordica charantia]	[more]
KAG7021658.1	3.0e-92	83.41	hypothetical protein SDJN02_15384, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_038880733.1	7.4e-91	83.41	uncharacterized protein LOC120072335 [Benincasa hispida]	[more]
XP_022925672.1	1.8e-89	82.49	uncharacterized protein LOC111433018 [Cucurbita moschata] >XP_022925678.1 unchar...	[more]
KAG6587693.1	2.0e-88	81.57	Serine/threonine-protein kinase 11-interacting protein, partial [Cucurbita argyr...	[more]

BLAST of MS002167.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS002167.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C000	5.0e-109	97.24	uncharacterized protein LOC111006814 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1EFX7	8.8e-90	82.49	uncharacterized protein LOC111433018 OS=Cucurbita moschata OX=3662 GN=LOC1114330...	[more]
A0A6J1IDW5	1.7e-88	81.57	uncharacterized protein LOC111471752 OS=Cucurbita maxima OX=3661 GN=LOC111471752...	[more]
A0A1S3BX71	4.8e-88	82.49	uncharacterized protein LOC103494194 OS=Cucumis melo OX=3656 GN=LOC103494194 PE=...	[more]
A0A0A0LPZ9	2.0e-86	81.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025200 PE=4 SV=1	[more]

BLAST of MS002167.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17930.1	8.8e-42	69.11	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021562	Protein of unknown function DUF3007	PFAM	PF11460	DUF3007	coord: 109..204 e-value: 1.3E-32 score: 111.9
IPR021562	Protein of unknown function DUF3007	PANTHER	PTHR35734	OS01G0805200 PROTEIN	coord: 4..217
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..102

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS002167	MS002167	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS002167.1-cds	MS002167.1-cds-scaffold30:2910429..2910558	CDS
MS002167.1-cds	MS002167.1-cds-scaffold30:2912191..2912366	CDS
MS002167.1-cds	MS002167.1-cds-scaffold30:2912852..2912941	CDS
MS002167.1-cds	MS002167.1-cds-scaffold30:2913562..2913720	CDS
MS002167.1-cds	MS002167.1-cds-scaffold30:2913888..2913983	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS002167.1	MS002167.1-protein	polypeptide