MS001959.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS001959.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Germin-like protein
Location	scaffold30: 1303256 .. 1303918 (+)
Sequence length	663
RNA-Seq Expression	MS001959.1
Synteny	MS001959.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGCTTTCACAAGCTTACCTTTGAACATGCTTGGTTGCTTCATTATATTGCTGCTTCTTCCTTCTCTTTGTTTGTCAGCTGACCCCGATCCGTTGCAGGACTTCTGCGTTCGTGATTTAAATGCGACCATATCAGTCAATGGTTTCCCTTGCAAGCCAGTATCAGATGTTACTTCGGATGATTTCTTCTTTGATGGATTGATCAAAGAGCCCGACACAAATAATGCTTTCGGTTTCGGGGCCACACAAGGAAATGTTCTCGCATTTCCAGGACTCAATACACTCGGGCTATCCATGAACCGTGTCGACTTTGCTCCTGGAGGAGTAAATGCACCTCACTCGCATCCTCGTGCCTCTGAAAGCGGCGTCATTATTAAGGGGAAAGTTCTTGTTGGGTTTGTGACAACAGATGGTGTGTATCATTACAAGGTTTTGACTGCAGGGCAGATGTTTATCATTCCCAGAGGACTTGTTCATTTCCAGTATAATGTTGGAAGCAGCAAAGCAACTCTGCTCACAGCTTTCAACAGTCAGTTACCGGGGGTTGTGGTTGCATCTCGAACTTTGTTTGCTTCGAATCCTTCGATCCCTGTTGAAATTTTGAGCAAAGCTTTCCAAGTCGATGAAGGTGTTATCAACACCATAAAGTCCAAGTTTGCT

mRNA sequence

ATGATTGCTTTCACAAGCTTACCTTTGAACATGCTTGGTTGCTTCATTATATTGCTGCTTCTTCCTTCTCTTTGTTTGTCAGCTGACCCCGATCCGTTGCAGGACTTCTGCGTTCGTGATTTAAATGCGACCATATCAGTCAATGGTTTCCCTTGCAAGCCAGTATCAGATGTTACTTCGGATGATTTCTTCTTTGATGGATTGATCAAAGAGCCCGACACAAATAATGCTTTCGGTTTCGGGGCCACACAAGGAAATGTTCTCGCATTTCCAGGACTCAATACACTCGGGCTATCCATGAACCGTGTCGACTTTGCTCCTGGAGGAGTAAATGCACCTCACTCGCATCCTCGTGCCTCTGAAAGCGGCGTCATTATTAAGGGGAAAGTTCTTGTTGGGTTTGTGACAACAGATGGTGTGTATCATTACAAGGTTTTGACTGCAGGGCAGATGTTTATCATTCCCAGAGGACTTGTTCATTTCCAGTATAATGTTGGAAGCAGCAAAGCAACTCTGCTCACAGCTTTCAACAGTCAGTTACCGGGGGTTGTGGTTGCATCTCGAACTTTGTTTGCTTCGAATCCTTCGATCCCTGTTGAAATTTTGAGCAAAGCTTTCCAAGTCGATGAAGGTGTTATCAACACCATAAAGTCCAAGTTTGCT

Coding sequence (CDS)

ATGATTGCTTTCACAAGCTTACCTTTGAACATGCTTGGTTGCTTCATTATATTGCTGCTTCTTCCTTCTCTTTGTTTGTCAGCTGACCCCGATCCGTTGCAGGACTTCTGCGTTCGTGATTTAAATGCGACCATATCAGTCAATGGTTTCCCTTGCAAGCCAGTATCAGATGTTACTTCGGATGATTTCTTCTTTGATGGATTGATCAAAGAGCCCGACACAAATAATGCTTTCGGTTTCGGGGCCACACAAGGAAATGTTCTCGCATTTCCAGGACTCAATACACTCGGGCTATCCATGAACCGTGTCGACTTTGCTCCTGGAGGAGTAAATGCACCTCACTCGCATCCTCGTGCCTCTGAAAGCGGCGTCATTATTAAGGGGAAAGTTCTTGTTGGGTTTGTGACAACAGATGGTGTGTATCATTACAAGGTTTTGACTGCAGGGCAGATGTTTATCATTCCCAGAGGACTTGTTCATTTCCAGTATAATGTTGGAAGCAGCAAAGCAACTCTGCTCACAGCTTTCAACAGTCAGTTACCGGGGGTTGTGGTTGCATCTCGAACTTTGTTTGCTTCGAATCCTTCGATCCCTGTTGAAATTTTGAGCAAAGCTTTCCAAGTCGATGAAGGTGTTATCAACACCATAAAGTCCAAGTTTGCT

Protein sequence

MIAFTSLPLNMLGCFIILLLLPSLCLSADPDPLQDFCVRDLNATISVNGFPCKPVSDVTSDDFFFDGLIKEPDTNNAFGFGATQGNVLAFPGLNTLGLSMNRVDFAPGGVNAPHSHPRASESGVIIKGKVLVGFVTTDGVYHYKVLTAGQMFIIPRGLVHFQYNVGSSKATLLTAFNSQLPGVVVASRTLFASNPSIPVEILSKAFQVDEGVINTIKSKFA

Homology

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BLAST of MS001959.1 vs. NCBI nr
Match: XP_022135143.1 (germin-like protein subfamily T member 2 [Momordica charantia])

HSP 1 Score: 437.6 bits (1124), Expect = 6.5e-119
Identity = 220/221 (99.55%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MIAFTSLPLNMLGCFIILLLLPSLCLSADPDPLQDFCVRDLNATISVNGFPCKPVSDVTS 60
           MIAFTSLPLNMLGCFIILLLLPSLCLSADPDPLQDFCVRDLNATISVNGFPCKPVSDVTS
Sbjct: 1   MIAFTSLPLNMLGCFIILLLLPSLCLSADPDPLQDFCVRDLNATISVNGFPCKPVSDVTS 60

Query: 61  DDFFFDGLIKEPDTNNAFGFGATQGNVLAFPGLNTLGLSMNRVDFAPGGVNAPHSHPRAS 120
           DDFFFDGLIKEPDTNNAFGFGATQGNVLAFPGLNTLGLSMNRVDFAPGGVNAPHSHPRAS
Sbjct: 61  DDFFFDGLIKEPDTNNAFGFGATQGNVLAFPGLNTLGLSMNRVDFAPGGVNAPHSHPRAS 120

Query: 121 ESGVIIKGKVLVGFVTTDGVYHYKVLTAGQMFIIPRGLVHFQYNVGSSKATLLTAFNSQL 180
           ESGVIIKGKVLVGFVTTDGVYHYKVLTAGQMFIIPRGLVH QYNVGSSKATLLTAFNSQL
Sbjct: 121 ESGVIIKGKVLVGFVTTDGVYHYKVLTAGQMFIIPRGLVHLQYNVGSSKATLLTAFNSQL 180

Query: 181 PGVVVASRTLFASNPSIPVEILSKAFQVDEGVINTIKSKFA 222
           PGVVVASRTLFASNPSIPVEILSKAFQVDEGVINTIKSKFA
Sbjct: 181 PGVVVASRTLFASNPSIPVEILSKAFQVDEGVINTIKSKFA 221

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BLAST of MS001959.1 vs. NCBI nr
Match: XP_023516405.1 (germin-like protein subfamily T member 2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 367.5 bits (942), Expect = 8.3e-98
Identity = 182/221 (82.35%), Postives = 199/221 (90.05%), Query Frame = 0


Query: 1   MIAFTSLPLNMLGCFIILLLLPSLCLSADPDPLQDFCVRDLNATISVNGFPCKPVSDVTS 60
           M+A TS P+NMLGC IILLLLP   LSADPDPLQDFCV DLNAT+S+NGFPCKPVS+VTS
Sbjct: 1   MLALTSSPVNMLGCLIILLLLPYPSLSADPDPLQDFCVADLNATVSLNGFPCKPVSEVTS 60

Query: 61  DDFFFDGLIKEPDTNNAFGFGATQGNVLAFPGLNTLGLSMNRVDFAPGGVNAPHSHPRAS 120
           DDFFFDGL KE +T+N FGFGATQGNVLAFPGLNTLGLSMNRVD A GG+NAPHSHPRAS
Sbjct: 61  DDFFFDGLSKEGNTDNPFGFGATQGNVLAFPGLNTLGLSMNRVDLARGGINAPHSHPRAS 120

Query: 121 ESGVIIKGKVLVGFVTTDGVYHYKVLTAGQMFIIPRGLVHFQYNVGSSKATLLTAFNSQL 180
           ES V+IKGKVLVGFV+T  VY+YKVLT G+MFIIPRGLVHFQYNVG SKA LLTAFNSQL
Sbjct: 121 ESVVVIKGKVLVGFVSTSNVYYYKVLTEGEMFIIPRGLVHFQYNVGHSKAILLTAFNSQL 180

Query: 181 PGVVVASRTLFASNPSIPVEILSKAFQVDEGVINTIKSKFA 222
           PG V+ SRTLFASNP IP+EIL+K FQVD+GVIN+IKSKFA
Sbjct: 181 PGAVIVSRTLFASNPPIPLEILTKTFQVDDGVINSIKSKFA 221

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BLAST of MS001959.1 vs. NCBI nr
Match: XP_038879323.1 (germin-like protein subfamily T member 2 [Benincasa hispida])

HSP 1 Score: 360.1 bits (923), Expect = 1.3e-95
Identity = 181/221 (81.90%), Postives = 196/221 (88.69%), Query Frame = 0


Query: 1   MIAFTSLPLNMLGCFIILLLLPSLCLSADPDPLQDFCVRDLNATISVNGFPCKPVSDVTS 60
           MIA  + PLNML CFIILLLLP   LSAD DPLQDFCV DLNATIS+NGFPCKPVS+VT+
Sbjct: 1   MIALRNSPLNMLSCFIILLLLPYPSLSADLDPLQDFCVADLNATISLNGFPCKPVSEVTA 60

Query: 61  DDFFFDGLIKEPDTNNAFGFGATQGNVLAFPGLNTLGLSMNRVDFAPGGVNAPHSHPRAS 120
           DDFFFDGL KE +T+N FGFG TQGNVLAFPGLNTLGLSMNRVD A GG+NAPHSHPRAS
Sbjct: 61  DDFFFDGLSKEGNTDNPFGFGVTQGNVLAFPGLNTLGLSMNRVDLAKGGINAPHSHPRAS 120

Query: 121 ESGVIIKGKVLVGFVTTDGVYHYKVLTAGQMFIIPRGLVHFQYNVGSSKATLLTAFNSQL 180
           ES V+IKGKVLVGFV+T  VY+YKVLT GQMFI+PRGLVHFQYNVG SKA LLTAFNSQL
Sbjct: 121 ESIVVIKGKVLVGFVSTRNVYYYKVLTVGQMFIVPRGLVHFQYNVGHSKAILLTAFNSQL 180

Query: 181 PGVVVASRTLFASNPSIPVEILSKAFQVDEGVINTIKSKFA 222
           PG VV SRTLFASNP IPV+IL+K FQVD+GVIN+IKSKFA
Sbjct: 181 PGAVVVSRTLFASNPPIPVKILTKTFQVDDGVINSIKSKFA 221

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BLAST of MS001959.1 vs. NCBI nr
Match: XP_022988407.1 (germin-like protein subfamily T member 2 [Cucurbita maxima])

HSP 1 Score: 359.0 bits (920), Expect = 2.9e-95
Identity = 176/221 (79.64%), Postives = 198/221 (89.59%), Query Frame = 0


Query: 1   MIAFTSLPLNMLGCFIILLLLPSLCLSADPDPLQDFCVRDLNATISVNGFPCKPVSDVTS 60
           M+A TS P+NMLGC IILLLLP   LSADPDPLQ+FCV DLNAT+S+NGFPCKPVS+VT+
Sbjct: 1   MMALTSSPVNMLGCLIILLLLPYPSLSADPDPLQNFCVADLNATVSLNGFPCKPVSEVTA 60

Query: 61  DDFFFDGLIKEPDTNNAFGFGATQGNVLAFPGLNTLGLSMNRVDFAPGGVNAPHSHPRAS 120
           DDFFFDGL KE +T+N FGFG TQGNVL+FPGLNTLGLSMNRVD A GG+NAPHSHPRAS
Sbjct: 61  DDFFFDGLSKEGNTDNPFGFGVTQGNVLSFPGLNTLGLSMNRVDLARGGINAPHSHPRAS 120

Query: 121 ESGVIIKGKVLVGFVTTDGVYHYKVLTAGQMFIIPRGLVHFQYNVGSSKATLLTAFNSQL 180
           ES V+IKG+VLVGFV+T  VY+YKVLT G+MFIIPRGLVHFQYNVG SKA LLTAFNSQL
Sbjct: 121 ESVVVIKGEVLVGFVSTSNVYYYKVLTEGEMFIIPRGLVHFQYNVGHSKAILLTAFNSQL 180

Query: 181 PGVVVASRTLFASNPSIPVEILSKAFQVDEGVINTIKSKFA 222
           PG V+ S+TLFASNP +PVEIL+K FQVD+GVIN+IKSKFA
Sbjct: 181 PGAVIVSQTLFASNPPVPVEILTKTFQVDDGVINSIKSKFA 221

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BLAST of MS001959.1 vs. NCBI nr
Match: XP_023531852.1 (germin-like protein subfamily T member 2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357.5 bits (916), Expect = 8.6e-95
Identity = 175/221 (79.19%), Postives = 195/221 (88.24%), Query Frame = 0


Query: 1   MIAFTSLPLNMLGCFIILLLLPSLCLSADPDPLQDFCVRDLNATISVNGFPCKPVSDVTS 60
           MIA TS PLNMLGCFIILLLLP   LSADPDPLQDFCV DLNAT+S+NGFPCKPV++VTS
Sbjct: 1   MIALTSSPLNMLGCFIILLLLPYHSLSADPDPLQDFCVADLNATVSLNGFPCKPVAEVTS 60

Query: 61  DDFFFDGLIKEPDTNNAFGFGATQGNVLAFPGLNTLGLSMNRVDFAPGGVNAPHSHPRAS 120
           DDFFFDGL KE +T+N FGF   QGNVL+FPGLNTLG+SMNRVD APGG+NAPHSHPRA+
Sbjct: 61  DDFFFDGLSKEGNTDNPFGFAVAQGNVLSFPGLNTLGISMNRVDLAPGGINAPHSHPRAT 120

Query: 121 ESGVIIKGKVLVGFVTTDGVYHYKVLTAGQMFIIPRGLVHFQYNVGSSKATLLTAFNSQL 180
           ES V+IKGKVLVGFV+T  VY YKVLT GQMF+IPRGL+HFQYNVG SKA LLTAFNSQL
Sbjct: 121 ESIVVIKGKVLVGFVSTSNVYFYKVLTVGQMFVIPRGLIHFQYNVGHSKAILLTAFNSQL 180

Query: 181 PGVVVASRTLFASNPSIPVEILSKAFQVDEGVINTIKSKFA 222
           PG V+ SRTLFASNP IP +IL+K F+VD+ VIN+IKSKFA
Sbjct: 181 PGAVIVSRTLFASNPPIPNQILTKTFRVDDDVINSIKSKFA 221

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BLAST of MS001959.1 vs. ExPASy Swiss-Prot
Match: Q9LMC9 (Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana OX=3702 GN=At1g18980 PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.6e-64
Identity = 123/206 (59.71%), Postives = 154/206 (74.76%), Query Frame = 0


Query: 16  IILLLLPSLCLSADPDPLQDFCVRDLNATISVNGFPCKPVSDVTSDDFFFDGLIKEPDTN 75
           I + ++PS  LS+D DPLQDFCV DL A+ S+NGFPCK  S V++ DFFF GL    +T+
Sbjct: 18  ICVFVIPS--LSSDSDPLQDFCVGDLKASPSINGFPCK--SSVSASDFFFSGLGGPLNTS 77

Query: 76  NAFGFGATQGNVLAFPGLNTLGLSMNRVDFAPGGVNAPHSHPRASESGVIIKGKVLVGFV 135
              G   +  NVL FPGLNTLGLSMN V+FAPGGVN PHSHPRA+E+GV+I+G V VGF+
Sbjct: 78  TPNGVAVSPANVLTFPGLNTLGLSMNNVEFAPGGVNPPHSHPRATEAGVVIEGSVFVGFL 137

Query: 136 TTDGVYHYKVLTAGQMFIIPRGLVHFQYNVGSSKATLLTAFNSQLPGVVVASRTLFASNP 195
           TT+     KVL AG+MF++PRGLVHFQ+NVG  KA L+T+FNSQLPG  V   TLF SNP
Sbjct: 138 TTNNTLFSKVLNAGEMFVVPRGLVHFQWNVGKVKARLITSFNSQLPGSAVLPSTLFGSNP 197

Query: 196 SIPVEILSKAFQVDEGVINTIKSKFA 222
           +IP  +L+K F+ D+  +N +KSKFA
Sbjct: 198 TIPNAVLTKTFRTDDVTVNKLKSKFA 219

[Close]

BLAST of MS001959.1 vs. ExPASy Swiss-Prot
Match: P92995 (Germin-like protein subfamily T member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP1 PE=2 SV=2)

HSP 1 Score: 237.3 bits (604), Expect = 1.7e-61
Identity = 122/223 (54.71%), Postives = 156/223 (69.96%), Query Frame = 0


Query: 2   IAFTSLPLNMLGCFII---LLLLPSLCLSADPDPLQDFCVRDLNATISVNGFPCKPVSDV 61
           +A   +P  +L  F++   L ++PS  LS+D DPLQDFCV DL A+ S+NGFPCK  S V
Sbjct: 1   MATLQIPSALLRSFLLMFCLFVIPS--LSSDSDPLQDFCVGDLKASASINGFPCK--SAV 60

Query: 62  TSDDFFFDGLIKEPDTNNAFGFGATQGNVLAFPGLNTLGLSMNRVDFAPGGVNAPHSHPR 121
           ++ DFF+ GL    DT+N  G      NVL FPGLNTLG+SMN V+ APGGVN PH HPR
Sbjct: 61  SASDFFYSGLGGPLDTSNPNGVTVAPANVLTFPGLNTLGISMNNVELAPGGVNPPHLHPR 120

Query: 122 ASESGVIIKGKVLVGFVTTDGVYHYKVLTAGQMFIIPRGLVHFQYNVGSSKATLLTAFNS 181
           A+E G +I+G V VGF++T+     KVL AG+ F+IPRGLVHFQ+NVG  KA ++TAFNS
Sbjct: 121 ATEVGTVIEGSVFVGFLSTNNTLFSKVLNAGEAFVIPRGLVHFQWNVGQVKARMITAFNS 180

Query: 182 QLPGVVVASRTLFASNPSIPVEILSKAFQVDEGVINTIKSKFA 222
           QLPG VV   TLF S P IP  +L++AF+ D+  +  +KSKFA
Sbjct: 181 QLPGAVVLPSTLFGSKPEIPNAVLTRAFRTDDTTVQNLKSKFA 219

[Close]

BLAST of MS001959.1 vs. ExPASy Swiss-Prot
Match: Q75HJ4 (Germin-like protein 3-8 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0804700 PE=2 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.7e-59
Identity = 120/224 (53.57%), Postives = 152/224 (67.86%), Query Frame = 0


Query: 5   TSLPLNMLGCFIILLLLPSLCLSADPDPLQDFCVRDL--------NATISVNGFPCKPVS 64
           +S PL +L     L +L S C+ ADP+P+QDFCV  +         A  +  GFPCKP S
Sbjct: 5   SSAPLLVLSA--ALAVLASTCI-ADPEPVQDFCVAVVPRAGDAAAAACPAYPGFPCKPAS 64

Query: 65  DVTSDDFFFDGLIKEPDTNNAFGFGATQGNVLAFPGLNTLGLSMNRVDFAPGGVNAPHSH 124
            V SDDFFF GL    DT+N FGF  T  N   FPGLNTLG+S+ RVD APGGVN  HSH
Sbjct: 65  TVVSDDFFFAGLAVASDTDNRFGFNVTAANAETFPGLNTLGVSIGRVDLAPGGVNPLHSH 124

Query: 125 PRASESGVIIKGKVLVGFVTTDGVYHYKVLTAGQMFIIPRGLVHFQYNVGSSKATLLTAF 184
           PRA+E   ++ G+VL GFV+T G ++ KVL  G+ F++PRG++HFQYNVG   A ++TAF
Sbjct: 125 PRATELIHVVAGRVLAGFVSTAGEFYSKVLGEGETFVVPRGMIHFQYNVGGVAAQVITAF 184

Query: 185 NSQLPGVVVASRTLFASNPSIPVEILSKAFQVDEGVINTIKSKF 221
           NSQ+PGVV A  TLF S+P IP  +L+K+FQVD  +I  +KSKF
Sbjct: 185 NSQMPGVVAAGSTLFGSDPEIPDAVLAKSFQVDAKIIKLLKSKF 225

[Close]

BLAST of MS001959.1 vs. ExPASy Swiss-Prot
Match: Q10BU2 (Germin-like protein 3-7 OS=Oryza sativa subsp. japonica OX=39947 GN=GER7 PE=2 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.5e-57
Identity = 115/208 (55.29%), Postives = 146/208 (70.19%), Query Frame = 0


Query: 17  ILLLLPSLCLSADPDPLQDFCV----RDLNATISVNGFPCKPVSDVTSDDFFFDGLIKEP 76
           +L +L S C +ADP+P+QDFCV        A+ +  GFPCKP S V SDDFFF GL    
Sbjct: 25  VLAVLASTC-AADPEPIQDFCVAVPRAGGEASPAYPGFPCKPASAVVSDDFFFAGLAAAG 84

Query: 77  DTNNAFGFGATQGNVLAFPGLNTLGLSMNRVDFAPGGVNAPHSHPRASESGVIIKGKVLV 136
            T+N FG     GNV AFP LNTLG+++NRVD APGGVN  HSHPRA+E   +I G++LV
Sbjct: 85  STDNPFGASLKPGNVEAFPALNTLGVAINRVDLAPGGVNPLHSHPRAAELVHVITGRMLV 144

Query: 137 GFVTTDGVYHYKVLTAGQMFIIPRGLVHFQYNVGSSKATLLTAFNSQLPGVVVASRTLFA 196
           GFV+T G Y+ KV+  G+ F IPRGL+HFQYN G++ A  +T FNSQLPGVV A+  LF 
Sbjct: 145 GFVSTAGKYYSKVVGEGETFAIPRGLMHFQYNPGNASARAMTVFNSQLPGVVPAATALFG 204

Query: 197 SNPSIPVEILSKAFQVDEGVINTIKSKF 221
           ++P IP  +L+K+FQVD  +I  +KSKF
Sbjct: 205 ADPEIPDAVLAKSFQVDAEIIKLLKSKF 231

[Close]

BLAST of MS001959.1 vs. ExPASy Swiss-Prot
Match: Q94JF3 (Germin-like protein 1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0705100 PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 6.2e-56
Identity = 101/194 (52.06%), Postives = 136/194 (70.10%), Query Frame = 0


Query: 28  ADPDPLQDFCVRDLNATISVNGFPCKPVSDVTSDDFFFDGLIKEPDTNNAFGFGATQGNV 87
           AD  PLQD CV DL A  +V+GFPCKP + V SDDFF D +++ P T+N FG  +T+  V
Sbjct: 29  ADSPPLQDICVADLRAATAVDGFPCKPTASVVSDDFFCDAIVQAPSTSNPFGVNSTRATV 88

Query: 88  LAFPGLNTLGLSMNRVDFAPGGVNAPHSHPRASESGVIIKGKVLVGFVTTDGVYHYKVLT 147
            AFPGLNTLGLS+ R D APGG+N PHSHPRASE  +++ G+V+VGF T       KV+ 
Sbjct: 89  SAFPGLNTLGLSITRTDLAPGGLNPPHSHPRASELVLVLSGEVMVGFTTAANRLFSKVVR 148

Query: 148 AGQMFIIPRGLVHFQYNVGSSKATLLTAFNSQLPGVVVASRTLFASNPSIPVEILSKAFQ 207
             ++F++PRGL HFQ NVG+  A+ +  F+SQ PG+V  +  LFA+ P++P+E+L+K F 
Sbjct: 149 EKELFVVPRGLQHFQLNVGAGNASFVAMFDSQSPGLVTPTFALFATQPAMPMEVLAKTFL 208

Query: 208 VDEGVINTIKSKFA 222
           + E  +  IKSKFA
Sbjct: 209 MGEDEVGAIKSKFA 222

[Close]

BLAST of MS001959.1 vs. ExPASy TrEMBL
Match: A0A6J1C3Z8 (Germin-like protein OS=Momordica charantia OX=3673 GN=LOC111007185 PE=3 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 3.2e-119
Identity = 220/221 (99.55%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MIAFTSLPLNMLGCFIILLLLPSLCLSADPDPLQDFCVRDLNATISVNGFPCKPVSDVTS 60
           MIAFTSLPLNMLGCFIILLLLPSLCLSADPDPLQDFCVRDLNATISVNGFPCKPVSDVTS
Sbjct: 1   MIAFTSLPLNMLGCFIILLLLPSLCLSADPDPLQDFCVRDLNATISVNGFPCKPVSDVTS 60

Query: 61  DDFFFDGLIKEPDTNNAFGFGATQGNVLAFPGLNTLGLSMNRVDFAPGGVNAPHSHPRAS 120
           DDFFFDGLIKEPDTNNAFGFGATQGNVLAFPGLNTLGLSMNRVDFAPGGVNAPHSHPRAS
Sbjct: 61  DDFFFDGLIKEPDTNNAFGFGATQGNVLAFPGLNTLGLSMNRVDFAPGGVNAPHSHPRAS 120

Query: 121 ESGVIIKGKVLVGFVTTDGVYHYKVLTAGQMFIIPRGLVHFQYNVGSSKATLLTAFNSQL 180
           ESGVIIKGKVLVGFVTTDGVYHYKVLTAGQMFIIPRGLVH QYNVGSSKATLLTAFNSQL
Sbjct: 121 ESGVIIKGKVLVGFVTTDGVYHYKVLTAGQMFIIPRGLVHLQYNVGSSKATLLTAFNSQL 180

Query: 181 PGVVVASRTLFASNPSIPVEILSKAFQVDEGVINTIKSKFA 222
           PGVVVASRTLFASNPSIPVEILSKAFQVDEGVINTIKSKFA
Sbjct: 181 PGVVVASRTLFASNPSIPVEILSKAFQVDEGVINTIKSKFA 221

[Close]

BLAST of MS001959.1 vs. ExPASy TrEMBL
Match: A0A6J1JCY5 (Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111485659 PE=3 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.4e-95
Identity = 176/221 (79.64%), Postives = 198/221 (89.59%), Query Frame = 0


Query: 1   MIAFTSLPLNMLGCFIILLLLPSLCLSADPDPLQDFCVRDLNATISVNGFPCKPVSDVTS 60
           M+A TS P+NMLGC IILLLLP   LSADPDPLQ+FCV DLNAT+S+NGFPCKPVS+VT+
Sbjct: 1   MMALTSSPVNMLGCLIILLLLPYPSLSADPDPLQNFCVADLNATVSLNGFPCKPVSEVTA 60

Query: 61  DDFFFDGLIKEPDTNNAFGFGATQGNVLAFPGLNTLGLSMNRVDFAPGGVNAPHSHPRAS 120
           DDFFFDGL KE +T+N FGFG TQGNVL+FPGLNTLGLSMNRVD A GG+NAPHSHPRAS
Sbjct: 61  DDFFFDGLSKEGNTDNPFGFGVTQGNVLSFPGLNTLGLSMNRVDLARGGINAPHSHPRAS 120

Query: 121 ESGVIIKGKVLVGFVTTDGVYHYKVLTAGQMFIIPRGLVHFQYNVGSSKATLLTAFNSQL 180
           ES V+IKG+VLVGFV+T  VY+YKVLT G+MFIIPRGLVHFQYNVG SKA LLTAFNSQL
Sbjct: 121 ESVVVIKGEVLVGFVSTSNVYYYKVLTEGEMFIIPRGLVHFQYNVGHSKAILLTAFNSQL 180

Query: 181 PGVVVASRTLFASNPSIPVEILSKAFQVDEGVINTIKSKFA 222
           PG V+ S+TLFASNP +PVEIL+K FQVD+GVIN+IKSKFA
Sbjct: 181 PGAVIVSQTLFASNPPVPVEILTKTFQVDDGVINSIKSKFA 221

[Close]

BLAST of MS001959.1 vs. ExPASy TrEMBL
Match: A0A6J1I672 (Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111471468 PE=3 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 5.4e-95
Identity = 176/221 (79.64%), Postives = 195/221 (88.24%), Query Frame = 0


Query: 1   MIAFTSLPLNMLGCFIILLLLPSLCLSADPDPLQDFCVRDLNATISVNGFPCKPVSDVTS 60
           MIA TS PLNMLGCFIILLLLP   LSADPDPLQDFCV DLNAT+S+NGFPCKPV++VTS
Sbjct: 1   MIALTSSPLNMLGCFIILLLLPYHSLSADPDPLQDFCVADLNATVSLNGFPCKPVAEVTS 60

Query: 61  DDFFFDGLIKEPDTNNAFGFGATQGNVLAFPGLNTLGLSMNRVDFAPGGVNAPHSHPRAS 120
           DDFFFDGL KE +T+N FGF   QGNVL+FPGLNTLG+SMNRVD AP G+NAPHSHPRA+
Sbjct: 61  DDFFFDGLSKEGNTDNPFGFAVAQGNVLSFPGLNTLGISMNRVDLAPRGINAPHSHPRAT 120

Query: 121 ESGVIIKGKVLVGFVTTDGVYHYKVLTAGQMFIIPRGLVHFQYNVGSSKATLLTAFNSQL 180
           ES V+IKGKVLVGFV+T  VY YKVLT GQMF+IPRGLVHFQYNVG SKA+LLTAFNSQL
Sbjct: 121 ESIVVIKGKVLVGFVSTSNVYFYKVLTVGQMFVIPRGLVHFQYNVGHSKASLLTAFNSQL 180

Query: 181 PGVVVASRTLFASNPSIPVEILSKAFQVDEGVINTIKSKFA 222
           PG V+ SRTLFASNP IP +IL+K FQVD+ VIN+IKSKFA
Sbjct: 181 PGAVIVSRTLFASNPPIPNQILTKTFQVDDDVINSIKSKFA 221

[Close]

BLAST of MS001959.1 vs. ExPASy TrEMBL
Match: A0A0A0LP04 (Germin-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G007890 PE=3 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.5e-94
Identity = 176/221 (79.64%), Postives = 193/221 (87.33%), Query Frame = 0


Query: 1   MIAFTSLPLNMLGCFIILLLLPSLCLSADPDPLQDFCVRDLNATISVNGFPCKPVSDVTS 60
           MIA  S  LNML CFIILLLLP   LSADPDPLQDFCV DLNAT+S+NGFPCKP S+VT+
Sbjct: 1   MIALRSSLLNMLVCFIILLLLPYPSLSADPDPLQDFCVADLNATVSLNGFPCKPASEVTA 60

Query: 61  DDFFFDGLIKEPDTNNAFGFGATQGNVLAFPGLNTLGLSMNRVDFAPGGVNAPHSHPRAS 120
           DDFFFDGL KE +T+N FGFG TQGNVL FPGLNTLGLSMNRVD A GG+NAPHSHPRA+
Sbjct: 61  DDFFFDGLSKEGNTDNPFGFGVTQGNVLTFPGLNTLGLSMNRVDLARGGINAPHSHPRAT 120

Query: 121 ESGVIIKGKVLVGFVTTDGVYHYKVLTAGQMFIIPRGLVHFQYNVGSSKATLLTAFNSQL 180
           ES V+IKGKVLVGFV+T  VY+YKVLT GQMF++PRGLVHFQYNVG  KATL+TAFNSQL
Sbjct: 121 ESIVVIKGKVLVGFVSTSSVYYYKVLTVGQMFVVPRGLVHFQYNVGHGKATLITAFNSQL 180

Query: 181 PGVVVASRTLFASNPSIPVEILSKAFQVDEGVINTIKSKFA 222
           PG VV SRTLFASNP +PVEIL+KAFQVD  VIN+IKSKFA
Sbjct: 181 PGAVVVSRTLFASNPPLPVEILTKAFQVDASVINSIKSKFA 221

[Close]

BLAST of MS001959.1 vs. ExPASy TrEMBL
Match: A0A6J1EXT8 (Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111439272 PE=3 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.5e-94
Identity = 174/221 (78.73%), Postives = 194/221 (87.78%), Query Frame = 0


Query: 1   MIAFTSLPLNMLGCFIILLLLPSLCLSADPDPLQDFCVRDLNATISVNGFPCKPVSDVTS 60
           MIA TS PLNMLGCFIILLLLP   LSADPDPLQDFCV DLNAT+S+NGFPCKPV++VTS
Sbjct: 1   MIALTSSPLNMLGCFIILLLLPYHSLSADPDPLQDFCVADLNATVSLNGFPCKPVAEVTS 60

Query: 61  DDFFFDGLIKEPDTNNAFGFGATQGNVLAFPGLNTLGLSMNRVDFAPGGVNAPHSHPRAS 120
           DDFFFDGL KE +T+N FGF   QGNVL+FPGLNTLG+SMNRVD AP G+NAPHSHPRA+
Sbjct: 61  DDFFFDGLSKEGNTDNPFGFAVAQGNVLSFPGLNTLGISMNRVDLAPRGINAPHSHPRAT 120

Query: 121 ESGVIIKGKVLVGFVTTDGVYHYKVLTAGQMFIIPRGLVHFQYNVGSSKATLLTAFNSQL 180
           ES V+IKGKVLVGFV+T  VY YKVLT GQMF+IPRGL+HFQYNVG SKA LLTAFNSQL
Sbjct: 121 ESIVVIKGKVLVGFVSTSNVYFYKVLTVGQMFVIPRGLIHFQYNVGHSKAILLTAFNSQL 180

Query: 181 PGVVVASRTLFASNPSIPVEILSKAFQVDEGVINTIKSKFA 222
           PG V+ SRTLFASNP IP +IL+K F+VD+ VIN+IKSKFA
Sbjct: 181 PGAVIVSRTLFASNPPIPNQILTKTFRVDDDVINSIKSKFA 221

[Close]

BLAST of MS001959.1 vs. TAIR 10
Match: AT1G18980.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 247.3 bits (630), Expect = 1.2e-65
Identity = 123/206 (59.71%), Postives = 154/206 (74.76%), Query Frame = 0


Query: 16  IILLLLPSLCLSADPDPLQDFCVRDLNATISVNGFPCKPVSDVTSDDFFFDGLIKEPDTN 75
           I + ++PS  LS+D DPLQDFCV DL A+ S+NGFPCK  S V++ DFFF GL    +T+
Sbjct: 18  ICVFVIPS--LSSDSDPLQDFCVGDLKASPSINGFPCK--SSVSASDFFFSGLGGPLNTS 77

Query: 76  NAFGFGATQGNVLAFPGLNTLGLSMNRVDFAPGGVNAPHSHPRASESGVIIKGKVLVGFV 135
              G   +  NVL FPGLNTLGLSMN V+FAPGGVN PHSHPRA+E+GV+I+G V VGF+
Sbjct: 78  TPNGVAVSPANVLTFPGLNTLGLSMNNVEFAPGGVNPPHSHPRATEAGVVIEGSVFVGFL 137

Query: 136 TTDGVYHYKVLTAGQMFIIPRGLVHFQYNVGSSKATLLTAFNSQLPGVVVASRTLFASNP 195
           TT+     KVL AG+MF++PRGLVHFQ+NVG  KA L+T+FNSQLPG  V   TLF SNP
Sbjct: 138 TTNNTLFSKVLNAGEMFVVPRGLVHFQWNVGKVKARLITSFNSQLPGSAVLPSTLFGSNP 197

Query: 196 SIPVEILSKAFQVDEGVINTIKSKFA 222
           +IP  +L+K F+ D+  +N +KSKFA
Sbjct: 198 TIPNAVLTKTFRTDDVTVNKLKSKFA 219

[Close]

BLAST of MS001959.1 vs. TAIR 10
Match: AT1G18970.1 (germin-like protein 4 )

HSP 1 Score: 237.3 bits (604), Expect = 1.2e-62
Identity = 122/223 (54.71%), Postives = 156/223 (69.96%), Query Frame = 0


Query: 2   IAFTSLPLNMLGCFII---LLLLPSLCLSADPDPLQDFCVRDLNATISVNGFPCKPVSDV 61
           +A   +P  +L  F++   L ++PS  LS+D DPLQDFCV DL A+ S+NGFPCK  S V
Sbjct: 1   MATLQIPSALLRSFLLMFCLFVIPS--LSSDSDPLQDFCVGDLKASASINGFPCK--SAV 60

Query: 62  TSDDFFFDGLIKEPDTNNAFGFGATQGNVLAFPGLNTLGLSMNRVDFAPGGVNAPHSHPR 121
           ++ DFF+ GL    DT+N  G      NVL FPGLNTLG+SMN V+ APGGVN PH HPR
Sbjct: 61  SASDFFYSGLGGPLDTSNPNGVTVAPANVLTFPGLNTLGISMNNVELAPGGVNPPHLHPR 120

Query: 122 ASESGVIIKGKVLVGFVTTDGVYHYKVLTAGQMFIIPRGLVHFQYNVGSSKATLLTAFNS 181
           A+E G +I+G V VGF++T+     KVL AG+ F+IPRGLVHFQ+NVG  KA ++TAFNS
Sbjct: 121 ATEVGTVIEGSVFVGFLSTNNTLFSKVLNAGEAFVIPRGLVHFQWNVGQVKARMITAFNS 180

Query: 182 QLPGVVVASRTLFASNPSIPVEILSKAFQVDEGVINTIKSKFA 222
           QLPG VV   TLF S P IP  +L++AF+ D+  +  +KSKFA
Sbjct: 181 QLPGAVVLPSTLFGSKPEIPNAVLTRAFRTDDTTVQNLKSKFA 219

[Close]

BLAST of MS001959.1 vs. TAIR 10
Match: AT1G09560.1 (germin-like protein 5 )

HSP 1 Score: 206.1 bits (523), Expect = 3.0e-53
Identity = 106/208 (50.96%), Postives = 136/208 (65.38%), Query Frame = 0


Query: 17  ILLLLPSLCL----SADPDPLQDFCVRDLNATISVNGFPCKPVSDVTSDDFFFDGLIKEP 76
           +LLLL ++      SADPD LQD CV DL + I +NGFPCK  + VTS DFF  GL K  
Sbjct: 8   LLLLLTTVSFFISSSADPDMLQDLCVADLPSGIKINGFPCKDAATVTSADFFSQGLAKPG 67

Query: 77  DTNNAFGFGATQGNVLAFPGLNTLGLSMNRVDFAPGGVNAPHSHPRASESGVIIKGKVLV 136
            TNN FG   T  NV+  PGLNTLG+S++R+D+APGG+N PH+HPRA+E   +++G + V
Sbjct: 68  LTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDV 127

Query: 137 GFVTTDGVYHYKVLTAGQMFIIPRGLVHFQYNVGSSKATLLTAFNSQLPGVVVASRTLFA 196
           GF+TT      + L  G +F  P+GLVHFQ N G   A+++ AFNSQLPG      TLF 
Sbjct: 128 GFLTTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGATLFG 187

Query: 197 SNPSIPVEILSKAFQVDEGVINTIKSKF 221
           S P +P  IL++AFQ   G +  IKSKF
Sbjct: 188 STPPVPDNILAQAFQTSPGTVKHIKSKF 215

[Close]

BLAST of MS001959.1 vs. TAIR 10
Match: AT1G74820.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 199.5 bits (506), Expect = 2.8e-51
Identity = 107/219 (48.86%), Postives = 140/219 (63.93%), Query Frame = 0


Query: 3   AFTSLPLNMLGCFIILLLLPSLCLSA-DPDPLQDFCVRDLNATISVNGFPCKPVSDVTSD 62
           +F S+ L  L   I L   P+L L A   +P QDFCV DL AT + +G+PCK  S VTS+
Sbjct: 9   SFLSIVLIFLALCITLFTNPTLSLPALKLNPFQDFCVADLQATPTNSGYPCK--SQVTSE 68

Query: 63  DFFFDGLIKEPDTNNAFGFGATQGNVLAFPGLNTLGLSMNRVDFAPGGVNAPHSHPRASE 122
           DFF+ GL    +T+N  G  A   N+L FPGLNTLG+SM  V  APGG N PHSHP  +E
Sbjct: 69  DFFYSGLNTPLNTSNPKGIAANPANLLTFPGLNTLGISMYNVAIAPGGYNQPHSHPGVTE 128

Query: 123 SGVIIKGKVLVGFVTTDGVYHYKVLTAGQMFIIPRGLVHFQYNVGSSKATLLTAFNSQLP 182
           +GV+I+G VLVGF+TT+   + KV+  G MF+IP GL+H++ NVG ++  LLT     LP
Sbjct: 129 AGVVIEGSVLVGFLTTNYTLYSKVIGPGDMFVIPPGLIHYEGNVGKTQCRLLTVVADDLP 188

Query: 183 GVVVASRTLFASNPSIPVEILSKAFQVDEGVINTIKSKF 221
             V    TL A+ P+IP E+L  AF+ D   IN ++SKF
Sbjct: 189 SEVGVPHTLLATKPAIPNEVLISAFKADSKTINMLRSKF 225

[Close]

BLAST of MS001959.1 vs. TAIR 10
Match: AT1G02335.1 (germin-like protein subfamily 2 member 2 precursor )

HSP 1 Score: 199.1 bits (505), Expect = 3.6e-51
Identity = 92/193 (47.67%), Postives = 129/193 (66.84%), Query Frame = 0


Query: 29  DPDPLQDFCVRDLNATISVNGFPCKPVSDVTSDDFFFDGLIKEPDTNNAFGFGATQGNVL 88
           DPD LQD CV D +    +NGFPCK   ++T  DFFF G+ K    N+  G   T  NV 
Sbjct: 24  DPDALQDLCVADKSHGTKLNGFPCKETLNITESDFFFAGISKPAVINSTMGSAVTGANVE 83

Query: 89  AFPGLNTLGLSMNRVDFAPGGVNAPHSHPRASESGVIIKGKVLVGFVTTDGVYHYKVLTA 148
             PGLNTL +S+ R+D+APGG+N PH+HPRA+E   +++G++ VGF+TT      K +  
Sbjct: 84  KIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVYVLEGELEVGFITTANKLFTKTIKI 143

Query: 149 GQMFIIPRGLVHFQYNVGSSKATLLTAFNSQLPGVVVASRTLFASNPSIPVEILSKAFQV 208
           G++F+ PRGLVHFQ N G S A++L+AFNSQLPG    + TLFA+ P++P ++L+K FQV
Sbjct: 144 GEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPGTASVAATLFAAEPALPEDVLTKTFQV 203

Query: 209 DEGVINTIKSKFA 222
              +++ IK + A
Sbjct: 204 GSKMVDKIKERLA 216

The following BLAST results are available for this feature:

BLAST of MS001959.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135143.1	6.5e-119	99.55	germin-like protein subfamily T member 2 [Momordica charantia]	[more]
XP_023516405.1	8.3e-98	82.35	germin-like protein subfamily T member 2 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_038879323.1	1.3e-95	81.90	germin-like protein subfamily T member 2 [Benincasa hispida]	[more]
XP_022988407.1	2.9e-95	79.64	germin-like protein subfamily T member 2 [Cucurbita maxima]	[more]
XP_023531852.1	8.6e-95	79.19	germin-like protein subfamily T member 2 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS001959.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LMC9	1.6e-64	59.71	Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana OX=3702 GN=At1g...	[more]
P92995	1.7e-61	54.71	Germin-like protein subfamily T member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP1...	[more]
Q75HJ4	2.7e-59	53.57	Germin-like protein 3-8 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0804700...	[more]
Q10BU2	1.5e-57	55.29	Germin-like protein 3-7 OS=Oryza sativa subsp. japonica OX=39947 GN=GER7 PE=2 SV...	[more]
Q94JF3	6.2e-56	52.06	Germin-like protein 1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0705100...	[more]

BLAST of MS001959.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C3Z8	3.2e-119	99.55	Germin-like protein OS=Momordica charantia OX=3673 GN=LOC111007185 PE=3 SV=1	[more]
A0A6J1JCY5	1.4e-95	79.64	Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111485659 PE=3 SV=1	[more]
A0A6J1I672	5.4e-95	79.64	Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111471468 PE=3 SV=1	[more]
A0A0A0LP04	3.5e-94	79.64	Germin-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G007890 PE=3 SV=1	[more]
A0A6J1EXT8	3.5e-94	78.73	Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111439272 PE=3 SV=1	[more]

BLAST of MS001959.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18980.1	1.2e-65	59.71	RmlC-like cupins superfamily protein	[more]
AT1G18970.1	1.2e-62	54.71	germin-like protein 4	[more]
AT1G09560.1	3.0e-53	50.96	germin-like protein 5	[more]
AT1G74820.1	2.8e-51	48.86	RmlC-like cupins superfamily protein	[more]
AT1G02335.1	3.6e-51	47.67	germin-like protein subfamily 2 member 2 precursor	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001929	Germin	PRINTS	PR00325	GERMIN	coord: 144..164 score: 52.05 coord: 177..192 score: 43.9 coord: 114..134 score: 50.5
IPR006045	Cupin 1	SMART	SM00835	Cupin_1_3	coord: 63..214 e-value: 5.7E-24 score: 95.6
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 72..210 e-value: 8.6E-37 score: 126.0
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 28..221 e-value: 3.2E-77 score: 260.5
None	No IPR available	PANTHER	PTHR31238:SF14	GERMIN-LIKE PROTEIN SUBFAMILY T MEMBER 1-RELATED	coord: 14..220
None	No IPR available	PANTHER	PTHR31238	GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3	coord: 14..220
None	No IPR available	CDD	cd02241	cupin_OxOx	coord: 29..220 e-value: 4.11277E-83 score: 243.657
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 29..220

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS001959	MS001959	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS001959.1-cds	MS001959.1-cds-scaffold30:1303256..1303918	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS001959.1	MS001959.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0030145	manganese ion binding