MS001955.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS001955.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	transcription factor MYB1R1-like
Location	scaffold30: 1270718 .. 1272381 (+)
Sequence length	942
RNA-Seq Expression	MS001955.1
Synteny	MS001955.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGAGCAGCACCGCCGTCACCAACGAATCCGCCGCCGCCGAGACCGGCGGTGGCGGTCCTGGTGAGATCATGTTGTTTGGTGTAAGAGTGGTGGTGGATTCCATGAGGAAGAGTGTGAGTTTGAACAATCTGTCGCAGTACGAGCAGCCTCATGAGGCCGCCGATGTAATCGCCAACGAGAACAAGAACGACGTCGTTTCCGTCAATAACAAAGACGATGTTGCCGCTGGATATGCCTCTGCAGATGATGCTGTTCCCAACGCCCGTGGGAACCGCGAACGTGAGCGCAAGCGAGGTTCGCTCGGCATCGGATCTCCGATAGCCTTCGATTTCTGTCTCTTTTGTTGTATCGCTTTAATTTTTACTGGCTTCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCTGATTCTTCTGATTTCTGTAGAGTTAATCTTTCGATCTATTTAATTGAGTTGGAGAGTCGCTATGTTTTATGATCGGAACGTACGGGGAGAAACTGGAGTTGGCCTTGTATGTTTATGCATCTCAGATTTTTGTATTTGTGTTTGACGAATTTGTTGCGTGTGGATGAATAATAGGTGTGCCGTGGACTGAGGAAGAGCACAAACTGTTTTTAATTGGATTACAAAGAGTGGGGAAGGGGGATTGGAGAGGAATTTCAAGGAATTTCGTCAAGACCCGCACCCCAACACAGGTCGCTAGCCACGCGCAGAAATACTTTCTTCGCCGGAGTAACCTAAATCGCCGTCGCCGTAGATCTAGTCTCTTCGATATCACGACGGACACGGTAACTTACGAATACTTGCTATTCAATTAGTATGTGCCAATTTTTTGGTTGTTGAATCTGATTACTGGTATGATGAGTTCATCCCTTATCTTCGACTATCAAGATTAAGTTGATTGTTGATTAGAAGTCAACAAGGTGGCTGTTTAATTATCTAATTAAGTTGGCGATTGACGAAATCCATGACAAACTACTCTCTATGATGATGGATCTAAGTTTTTTTTCAGTCTTTTATTTTCTTAGAGGCGGACATTGACCTTTAAAAGACCAAATTTCTCGATTGATTTCGCCATTTTTAGCTTCTGCTGGTTAATTGACCAATGAAAGACTTGACTTTTCTGTCTCATAATCTCTATTTTTCTCTCACCAACCCCAAAAAAGTTTGATTTTCACATTAACTCTGATTTTTCTTTTTCCTGTCCTGTTAGGTCACGGCTGAGCCAATGGTTGAAGAGCCGGTGCAGCATCAAGAAATTTCCTCTCAATCTCATTCCTTTACTCCATCAGCCCTGCCTGAAATTTCCCAGAACAATGTAATTCCAATGGTGCAAACTCTGCCACTTACAATTGGGCCAACACCATTAGCCACACCAACCAAGAATCTGATGGAAAAGTGTGGTCCTGGAGAAGTAAACACAGAAAATGATGGATCACTGAGGCTTGGCCTCACGGATTCCATCTTTTCCTCCAATCAAACTCCAAACTCAACTGATTTGAACTTAAATTCAAACTCAATAATGGAGCCATCAGCCTTATCTCTTCGCCTTTCCTTAACATCTGACCACAGGGAGGCCTCATCAAGGCACTCAACTTTCCAGGCCATGCCAAGTTTCAATAACGGCGAGGGAATCATAAGTGTTGCT

mRNA sequence

ATGCGGAGCAGCACCGCCGTCACCAACGAATCCGCCGCCGCCGAGACCGGCGGTGGCGGTCCTGGTGAGATCATGTTGTTTGGTGTAAGAGTGGTGGTGGATTCCATGAGGAAGAGTGTGAGTTTGAACAATCTGTCGCAGTACGAGCAGCCTCATGAGGCCGCCGATGTAATCGCCAACGAGAACAAGAACGACGTCGTTTCCGTCAATAACAAAGACGATGTTGCCGCTGGATATGCCTCTGCAGATGATGCTGTTCCCAACGCCCGTGGGAACCGCGAACGTGAGCGCAAGCGAGGTGTGCCGTGGACTGAGGAAGAGCACAAACTGTTTTTAATTGGATTACAAAGAGTGGGGAAGGGGGATTGGAGAGGAATTTCAAGGAATTTCGTCAAGACCCGCACCCCAACACAGGTCGCTAGCCACGCGCAGAAATACTTTCTTCGCCGGAGTAACCTAAATCGCCGTCGCCGTAGATCTAGTCTCTTCGATATCACGACGGACACGGTCACGGCTGAGCCAATGGTTGAAGAGCCGGTGCAGCATCAAGAAATTTCCTCTCAATCTCATTCCTTTACTCCATCAGCCCTGCCTGAAATTTCCCAGAACAATGTAATTCCAATGGTGCAAACTCTGCCACTTACAATTGGGCCAACACCATTAGCCACACCAACCAAGAATCTGATGGAAAAGTGTGGTCCTGGAGAAGTAAACACAGAAAATGATGGATCACTGAGGCTTGGCCTCACGGATTCCATCTTTTCCTCCAATCAAACTCCAAACTCAACTGATTTGAACTTAAATTCAAACTCAATAATGGAGCCATCAGCCTTATCTCTTCGCCTTTCCTTAACATCTGACCACAGGGAGGCCTCATCAAGGCACTCAACTTTCCAGGCCATGCCAAGTTTCAATAACGGCGAGGGAATCATAAGTGTTGCT

Coding sequence (CDS)

ATGCGGAGCAGCACCGCCGTCACCAACGAATCCGCCGCCGCCGAGACCGGCGGTGGCGGTCCTGGTGAGATCATGTTGTTTGGTGTAAGAGTGGTGGTGGATTCCATGAGGAAGAGTGTGAGTTTGAACAATCTGTCGCAGTACGAGCAGCCTCATGAGGCCGCCGATGTAATCGCCAACGAGAACAAGAACGACGTCGTTTCCGTCAATAACAAAGACGATGTTGCCGCTGGATATGCCTCTGCAGATGATGCTGTTCCCAACGCCCGTGGGAACCGCGAACGTGAGCGCAAGCGAGGTGTGCCGTGGACTGAGGAAGAGCACAAACTGTTTTTAATTGGATTACAAAGAGTGGGGAAGGGGGATTGGAGAGGAATTTCAAGGAATTTCGTCAAGACCCGCACCCCAACACAGGTCGCTAGCCACGCGCAGAAATACTTTCTTCGCCGGAGTAACCTAAATCGCCGTCGCCGTAGATCTAGTCTCTTCGATATCACGACGGACACGGTCACGGCTGAGCCAATGGTTGAAGAGCCGGTGCAGCATCAAGAAATTTCCTCTCAATCTCATTCCTTTACTCCATCAGCCCTGCCTGAAATTTCCCAGAACAATGTAATTCCAATGGTGCAAACTCTGCCACTTACAATTGGGCCAACACCATTAGCCACACCAACCAAGAATCTGATGGAAAAGTGTGGTCCTGGAGAAGTAAACACAGAAAATGATGGATCACTGAGGCTTGGCCTCACGGATTCCATCTTTTCCTCCAATCAAACTCCAAACTCAACTGATTTGAACTTAAATTCAAACTCAATAATGGAGCCATCAGCCTTATCTCTTCGCCTTTCCTTAACATCTGACCACAGGGAGGCCTCATCAAGGCACTCAACTTTCCAGGCCATGCCAAGTTTCAATAACGGCGAGGGAATCATAAGTGTTGCT

Protein sequence

MRSSTAVTNESAAAETGGGGPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHEAADVIANENKNDVVSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLIGLQRVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAEPMVEEPVQHQEISSQSHSFTPSALPEISQNNVIPMVQTLPLTIGPTPLATPTKNLMEKCGPGEVNTENDGSLRLGLTDSIFSSNQTPNSTDLNLNSNSIMEPSALSLRLSLTSDHREASSRHSTFQAMPSFNNGEGIISVA

Homology

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BLAST of MS001955.1 vs. NCBI nr
Match: XP_022135144.1 (transcription factor MYB1R1-like [Momordica charantia])

HSP 1 Score: 598.6 bits (1542), Expect = 3.1e-167
Identity = 312/314 (99.36%), Postives = 313/314 (99.68%), Query Frame = 0


Query: 1   MRSSTAVTNESAAAETGGGGPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHEAADVIAN 60
           MRSSTAVTNESAAAETGGG PGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHEAA+VIAN
Sbjct: 1   MRSSTAVTNESAAAETGGGCPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHEAANVIAN 60

Query: 61  ENKNDVVSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLIGLQRVGK 120
           ENKNDVVSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLIGLQRVGK
Sbjct: 61  ENKNDVVSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLIGLQRVGK 120

Query: 121 GDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAEPMVEEPV 180
           GDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAEPMVEEPV
Sbjct: 121 GDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAEPMVEEPV 180

Query: 181 QHQEISSQSHSFTPSALPEISQNNVIPMVQTLPLTIGPTPLATPTKNLMEKCGPGEVNTE 240
           QHQEISSQSHSFTPSALPEISQNNVIPMVQTLPLTIGPTPLATPTKNLMEKCGPGEVNTE
Sbjct: 181 QHQEISSQSHSFTPSALPEISQNNVIPMVQTLPLTIGPTPLATPTKNLMEKCGPGEVNTE 240

Query: 241 NDGSLRLGLTDSIFSSNQTPNSTDLNLNSNSIMEPSALSLRLSLTSDHREASSRHSTFQA 300
           NDGSLRLGLTDSIFSSNQTPNSTDLNLNSNSIMEPSALSLRLSLTSDHREASSRHSTFQA
Sbjct: 241 NDGSLRLGLTDSIFSSNQTPNSTDLNLNSNSIMEPSALSLRLSLTSDHREASSRHSTFQA 300

Query: 301 MPSFNNGEGIISVA 315
           MPSFNNGEGIISVA
Sbjct: 301 MPSFNNGEGIISVA 314

[Close]

BLAST of MS001955.1 vs. NCBI nr
Match: XP_022988403.1 (transcription factor MYB1R1-like [Cucurbita maxima])

HSP 1 Score: 524.2 bits (1349), Expect = 7.5e-145
Identity = 275/315 (87.30%), Postives = 288/315 (91.43%), Query Frame = 0


Query: 1   MRSSTAVTNESAAAETGGGGPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHEAADVIAN 60
           MRS+ A  NES AAET GGGPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHEAADVI N
Sbjct: 1   MRSTAAAVNESPAAETCGGGPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHEAADVITN 60

Query: 61  ENKNDVVSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLIGLQRVGK 120
           ++KND+VSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFL+GLQ+VGK
Sbjct: 61  DSKNDLVSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLVGLQQVGK 120

Query: 121 GDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAEPMVEEPV 180
           GDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTA PMVEEP 
Sbjct: 121 GDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAAPMVEEPA 180

Query: 181 QHQEISSQSHSFTPSALPEISQNNVIPMVQTLPLTIGPTPLATP-TKNLMEKCGPGEVNT 240
           Q QEI+SQSHSF PS  PEIS++NVIP+ Q LP + GP PLAT  TKNLMEKCGPGEVNT
Sbjct: 181 QRQEIASQSHSFIPSPPPEISKHNVIPVEQNLPFSFGPAPLATTLTKNLMEKCGPGEVNT 240

Query: 241 ENDGSLRLGLTDSIFSSNQTPNSTDLNLNSNSIMEPSALSLRLSLTSDHREASSRHSTFQ 300
           E+DGSL+LGL DSIF SNQ PNST LNLNSNS ME SALSLRLSLTSD REASSRHSTFQ
Sbjct: 241 ESDGSLKLGLKDSIFPSNQNPNSTGLNLNSNSAMESSALSLRLSLTSDQREASSRHSTFQ 300

Query: 301 AMPSFNNGEGIISVA 315
           AMPSFNNGEGIIS A
Sbjct: 301 AMPSFNNGEGIISAA 315

[Close]

BLAST of MS001955.1 vs. NCBI nr
Match: XP_022921751.1 (transcription factor MYB1R1-like [Cucurbita moschata])

HSP 1 Score: 523.9 bits (1348), Expect = 9.8e-145
Identity = 275/315 (87.30%), Postives = 289/315 (91.75%), Query Frame = 0


Query: 1   MRSSTAVTNESAAAETGGGGPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHEAADVIAN 60
           MRS+ AV NES AAET GGGPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHEAADVI N
Sbjct: 1   MRSTAAVVNESPAAETCGGGPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHEAADVITN 60

Query: 61  ENKNDVVSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLIGLQRVGK 120
           ++KND+VSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFL+GLQ+VGK
Sbjct: 61  DSKNDLVSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLVGLQQVGK 120

Query: 121 GDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAEPMVEEPV 180
           GDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTA PMVEEP 
Sbjct: 121 GDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAAPMVEEPT 180

Query: 181 QHQEISSQSHSFTPSALPEISQNNVIPMVQTLPLTIGPTPLATP-TKNLMEKCGPGEVNT 240
           + QEI+SQSHSF PS  PEIS++NVIP+ QTLP + GP PLAT  TKNLMEKCGPGEVNT
Sbjct: 181 KRQEIASQSHSFIPSPPPEISKHNVIPVEQTLPFSFGPAPLATTLTKNLMEKCGPGEVNT 240

Query: 241 ENDGSLRLGLTDSIFSSNQTPNSTDLNLNSNSIMEPSALSLRLSLTSDHREASSRHSTFQ 300
           E+DGSL+LGL DSIF SNQ P ST LNLNSNS ME SALSLRLSLTSD REASSRHSTFQ
Sbjct: 241 ESDGSLKLGLKDSIFPSNQNPTSTGLNLNSNSAMESSALSLRLSLTSDQREASSRHSTFQ 300

Query: 301 AMPSFNNGEGIISVA 315
           AMPSFNNGEGIIS A
Sbjct: 301 AMPSFNNGEGIISAA 315

[Close]

BLAST of MS001955.1 vs. NCBI nr
Match: XP_023516314.1 (transcription factor MYB1R1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 518.1 bits (1333), Expect = 5.4e-143
Identity = 272/315 (86.35%), Postives = 285/315 (90.48%), Query Frame = 0


Query: 1   MRSSTAVTNESAAAETGGGGPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHEAADVIAN 60
           MRS+ AV NES AAET GGGPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHE ADVI N
Sbjct: 3   MRSTAAVVNESPAAETCGGGPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHEVADVITN 62

Query: 61  ENKNDVVSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLIGLQRVGK 120
           ++KND+VSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFL+GLQ+VGK
Sbjct: 63  DSKNDLVSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLVGLQQVGK 122

Query: 121 GDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAEPMVEEPV 180
           GDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTA PMVEEP 
Sbjct: 123 GDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAAPMVEEPA 182

Query: 181 QHQEISSQSHSFTPSALPEISQNNVIPMVQTLPLTIGPTPLATP-TKNLMEKCGPGEVNT 240
           Q QEI+SQSHSF PS  PEIS++NVIP+  TLP + GP PLAT  TKNLMEKCGPGEVNT
Sbjct: 183 QRQEIASQSHSFIPSPPPEISKHNVIPVEHTLPFSFGPAPLATTLTKNLMEKCGPGEVNT 242

Query: 241 ENDGSLRLGLTDSIFSSNQTPNSTDLNLNSNSIMEPSALSLRLSLTSDHREASSRHSTFQ 300
           E+DGSL+LGL DSIF SNQ P ST LNLNSN  ME SALSLRLSLTSD REASSRH TFQ
Sbjct: 243 ESDGSLKLGLKDSIFPSNQNPTSTGLNLNSNPAMESSALSLRLSLTSDQREASSRHPTFQ 302

Query: 301 AMPSFNNGEGIISVA 315
           AMPSFNNGEGIIS A
Sbjct: 303 AMPSFNNGEGIISAA 317

[Close]

BLAST of MS001955.1 vs. NCBI nr
Match: XP_038878277.1 (transcription factor MYB1R1-like [Benincasa hispida])

HSP 1 Score: 515.4 bits (1326), Expect = 3.5e-142
Identity = 270/314 (85.99%), Postives = 284/314 (90.45%), Query Frame = 0


Query: 1   MRSSTAVTNESAAAETGGGGPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHEAADVIAN 60
           MRS+TA  NESAAAETGGGGPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPH+AAD+IAN
Sbjct: 1   MRSTTAAVNESAAAETGGGGPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHDAADIIAN 60

Query: 61  ENKNDVVSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLIGLQRVGK 120
           +NKND+VSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLIGLQ+VGK
Sbjct: 61  DNKNDLVSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLIGLQQVGK 120

Query: 121 GDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAEPMVEEPV 180
           GDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTA PMVEE V
Sbjct: 121 GDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAAPMVEESV 180

Query: 181 QHQEISSQSHSFTPSALPEISQNNVIPMVQTLPLTIGPTPLATPTKNLMEKCGPGEVNTE 240
           Q QEI SQSHSFTPS LPEIS NNVIP+VQTLPL+ GPTPLATPTKNLM KCGP E+NTE
Sbjct: 181 QPQEIPSQSHSFTPSTLPEISNNNVIPIVQTLPLSFGPTPLATPTKNLMGKCGPREINTE 240

Query: 241 NDGSLRLGLTDSIFSSNQTPNSTDLNLNSNSIMEPSALSLRLSLTSDHREASSRHSTFQA 300
           NDGSL+LGL DSIFSSNQ P ST       S    S LSLRLSLTSD  +ASSRHSTFQ+
Sbjct: 241 NDGSLKLGLADSIFSSNQIPTST-----MESSSSSSTLSLRLSLTSDQIDASSRHSTFQS 300

Query: 301 MPSFNNGEGIISVA 315
           +PSFNNG+ IIS A
Sbjct: 301 IPSFNNGDAIISAA 309

[Close]

BLAST of MS001955.1 vs. ExPASy Swiss-Prot
Match: Q2V9B0 (Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.7e-70
Identity = 175/318 (55.03%), Postives = 206/318 (64.78%), Query Frame = 0


Query: 1   MRSSTAVTNESAAAETGGGGPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHEAADVIAN 60
           M S  +  + S  A TGGG  GEIMLFGVRV VD MRKSVSLN+LSQYE P        N
Sbjct: 1   MSSVYSDKSSSTPAVTGGGFGGEIMLFGVRVKVDPMRKSVSLNDLSQYEHP--------N 60

Query: 61  ENKNDVVSVNNKDDVAA---GYASADDAVPNARGNRERERKRGVPWTEEEHKLFLIGLQR 120
            N N+    NN+    A   GYASADDAV + + N  RERKRGVPWTEEEHKLFL+GLQ+
Sbjct: 61  ANNNNNGGDNNESSKVAQDEGYASADDAVQH-QSNSGRERKRGVPWTEEEHKLFLLGLQK 120

Query: 121 VGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAEPMVE 180
           VGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTD+V+  P +E
Sbjct: 121 VGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDSVSVMP-IE 180

Query: 181 EPVQHQEISSQSHSFTPSALPEISQNNVIPMVQTLPLTIGPTPLATPTKNLMEKCGPGEV 240
           E    QEI        P+ LP  ++ N  P+  T+       P+  P +    +  P  +
Sbjct: 181 EVENKQEIP----VVAPATLP-TTKTNAFPVAPTV------GPIIFPVQIDKSREYPTLL 240

Query: 241 NTENDGSLRLGLTDSIFSSNQTPNSTDLNLNSNSIMEPSALSLRLSLTSDHREASS-RHS 300
             ++  S  L     +FS      + DLN N NS +EPS+LSLRLSL+ D  +ASS RHS
Sbjct: 241 RHDHGNSSMLVGPVPMFSMPNPSTAIDLNANHNSTIEPSSLSLRLSLSLDQGQASSTRHS 297

Query: 301 TFQAMPSFNNGEGIISVA 315
            +  M SF+NGE II VA
Sbjct: 301 AYNVMSSFSNGESIIRVA 297

[Close]

BLAST of MS001955.1 vs. ExPASy Swiss-Prot
Match: Q9LVS0 (Transcription factor KUA1 OS=Arabidopsis thaliana OX=3702 GN=KUA1 PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.6e-36
Identity = 86/158 (54.43%), Postives = 107/158 (67.72%), Query Frame = 0


Query: 24  IMLFGVRVVVDSMRKSVSLNNLSQYEQPHEAADVIANENKNDVVSVNNKDDVAA-GYASA 83
           + LFGVR+   S+RKS S+ NLS Y           +        V   D VA  GYAS 
Sbjct: 23  VKLFGVRLTEGSIRKSASMGNLSHYTGSGSGGHGTGSNTPGSPGDV--PDHVAGDGYASE 82

Query: 84  DDAVPNARGNRERERKRGVPWTEEEHKLFLIGLQRVGKGDWRGISRNFVKTRTPTQVASH 143
           D     A  +  RERK+G PWTEEEH++FL+GLQ++GKGDWRGISRN+V TRTPTQVASH
Sbjct: 83  DFV---AGSSSSRERKKGTPWTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASH 142

Query: 144 AQKYFLRRSNLNRRRRRSSLFDITTDTVTAEPM-VEEP 180
           AQKYF+R+SN++RR+RRSSLFD+  D V   PM ++EP
Sbjct: 143 AQKYFIRQSNVSRRKRRSSLFDMVPDEVGDIPMDLQEP 175

[Close]

BLAST of MS001955.1 vs. ExPASy Swiss-Prot
Match: Q7XC57 (Transcription factor MYBS3 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS3 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.0e-32
Identity = 89/211 (42.18%), Postives = 124/211 (58.77%), Query Frame = 0


Query: 24  IMLFGVRVVVDSMRKSVSLNNLSQYEQPHEAADVIANENKNDVVSVNNKDDVAAGYASAD 83
           + +FGVR+   S+RKS S+ NLS       +A    +   +     +     A GYAS D
Sbjct: 23  VKIFGVRLTDGSIRKSASMGNLSLL----SSAAGSTSGGASPADGPDAAPTAADGYAS-D 82

Query: 84  DAVPNARGNRERERKRGVPWTEEEHKLFLIGLQRVGKGDWRGISRNFVKTRTPTQVASHA 143
           D V  +  +  R+RK+GVPWTEEEH+ FL+GLQ++GKGDWRGISRNFV +RTPTQVASHA
Sbjct: 83  DFVQGS-SSATRDRKKGVPWTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHA 142

Query: 144 QKYFLRRSNLNRRRRRSSLFDITTD----------------TVTAEPMVEEPVQHQEISS 203
           QKYF+R+SN+ RR+RRSSLFD+  D                 V  +P +  P + +E+ S
Sbjct: 143 QKYFIRQSNMTRRKRRSSLFDMVPDESMDLPPLPGGQEPETQVLNQPALPPPREEEEVDS 202

Query: 204 QSHSFTPSALPEISQNNVIP--MVQTLPLTI 217
              S T +     S + ++P  +  T P+ +
Sbjct: 203 M-ESDTSAVAESSSASAIMPDNLQSTYPVIV 226

[Close]

BLAST of MS001955.1 vs. ExPASy Swiss-Prot
Match: Q9FKF9 (Probable transcription factor At5g61620 OS=Arabidopsis thaliana OX=3702 GN=At5g61620 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 5.1e-27
Identity = 78/193 (40.41%), Postives = 112/193 (58.03%), Query Frame = 0


Query: 18  GGGPGEIMLFGVRVVVD--------SMRKSVSLNNLSQYEQPHEAADVIANENKNDVVSV 77
           G     + LFGV +  D        ++RKS+SL NL           ++AN+  N     
Sbjct: 28  GVNKASVKLFGVNISSDPIRPPEVTALRKSLSLGNLDA---------LLANDESN----- 87

Query: 78  NNKDDVAA----GYASADDAVPNARGNRERERKRGVPWTEEEHKLFLIGLQRVGKGDWRG 137
            + D +AA    GY S D  + + +G    E+K+G PWTEEEH+ FLIGL ++GKGDWRG
Sbjct: 88  GSGDPIAAVDDTGYHS-DGQIHSKKGKTAHEKKKGKPWTEEEHRNFLIGLNKLGKGDWRG 147

Query: 138 ISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAEPMVEEPVQHQEI 197
           I+++FV TRTPTQVASHAQKYF+R +  ++R+RR+SLFDI+         +E+  + +  
Sbjct: 148 IAKSFVSTRTPTQVASHAQKYFIRLNVNDKRKRRASLFDIS---------LEDQKEKERN 196

Query: 198 SSQSHSFTPSALP 199
           S  + + TP   P
Sbjct: 208 SQDASTKTPPKQP 196

[Close]

BLAST of MS001955.1 vs. ExPASy Swiss-Prot
Match: B8A9B2 (Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.3e-26
Identity = 54/76 (71.05%), Postives = 68/76 (89.47%), Query Frame = 0


Query: 94  ERERKRGVPWTEEEHKLFLIGLQRVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNL 153
           E+ER++G+PWTEEEH+LFL+GL + GKGDWR ISRNFV +RTPTQVASHAQKYF+R +++
Sbjct: 135 EQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSM 194

Query: 154 NRRRRRSSLFDITTDT 170
           NR RRRSS+ DIT+ T
Sbjct: 195 NRDRRRSSIHDITSVT 210

[Close]

BLAST of MS001955.1 vs. ExPASy TrEMBL
Match: A0A6J1C0M2 (transcription factor MYB1R1-like OS=Momordica charantia OX=3673 GN=LOC111007186 PE=4 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 1.5e-167
Identity = 312/314 (99.36%), Postives = 313/314 (99.68%), Query Frame = 0


Query: 1   MRSSTAVTNESAAAETGGGGPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHEAADVIAN 60
           MRSSTAVTNESAAAETGGG PGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHEAA+VIAN
Sbjct: 1   MRSSTAVTNESAAAETGGGCPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHEAANVIAN 60

Query: 61  ENKNDVVSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLIGLQRVGK 120
           ENKNDVVSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLIGLQRVGK
Sbjct: 61  ENKNDVVSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLIGLQRVGK 120

Query: 121 GDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAEPMVEEPV 180
           GDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAEPMVEEPV
Sbjct: 121 GDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAEPMVEEPV 180

Query: 181 QHQEISSQSHSFTPSALPEISQNNVIPMVQTLPLTIGPTPLATPTKNLMEKCGPGEVNTE 240
           QHQEISSQSHSFTPSALPEISQNNVIPMVQTLPLTIGPTPLATPTKNLMEKCGPGEVNTE
Sbjct: 181 QHQEISSQSHSFTPSALPEISQNNVIPMVQTLPLTIGPTPLATPTKNLMEKCGPGEVNTE 240

Query: 241 NDGSLRLGLTDSIFSSNQTPNSTDLNLNSNSIMEPSALSLRLSLTSDHREASSRHSTFQA 300
           NDGSLRLGLTDSIFSSNQTPNSTDLNLNSNSIMEPSALSLRLSLTSDHREASSRHSTFQA
Sbjct: 241 NDGSLRLGLTDSIFSSNQTPNSTDLNLNSNSIMEPSALSLRLSLTSDHREASSRHSTFQA 300

Query: 301 MPSFNNGEGIISVA 315
           MPSFNNGEGIISVA
Sbjct: 301 MPSFNNGEGIISVA 314

[Close]

BLAST of MS001955.1 vs. ExPASy TrEMBL
Match: A0A6J1JM71 (transcription factor MYB1R1-like OS=Cucurbita maxima OX=3661 GN=LOC111485656 PE=4 SV=1)

HSP 1 Score: 524.2 bits (1349), Expect = 3.6e-145
Identity = 275/315 (87.30%), Postives = 288/315 (91.43%), Query Frame = 0


Query: 1   MRSSTAVTNESAAAETGGGGPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHEAADVIAN 60
           MRS+ A  NES AAET GGGPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHEAADVI N
Sbjct: 1   MRSTAAAVNESPAAETCGGGPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHEAADVITN 60

Query: 61  ENKNDVVSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLIGLQRVGK 120
           ++KND+VSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFL+GLQ+VGK
Sbjct: 61  DSKNDLVSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLVGLQQVGK 120

Query: 121 GDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAEPMVEEPV 180
           GDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTA PMVEEP 
Sbjct: 121 GDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAAPMVEEPA 180

Query: 181 QHQEISSQSHSFTPSALPEISQNNVIPMVQTLPLTIGPTPLATP-TKNLMEKCGPGEVNT 240
           Q QEI+SQSHSF PS  PEIS++NVIP+ Q LP + GP PLAT  TKNLMEKCGPGEVNT
Sbjct: 181 QRQEIASQSHSFIPSPPPEISKHNVIPVEQNLPFSFGPAPLATTLTKNLMEKCGPGEVNT 240

Query: 241 ENDGSLRLGLTDSIFSSNQTPNSTDLNLNSNSIMEPSALSLRLSLTSDHREASSRHSTFQ 300
           E+DGSL+LGL DSIF SNQ PNST LNLNSNS ME SALSLRLSLTSD REASSRHSTFQ
Sbjct: 241 ESDGSLKLGLKDSIFPSNQNPNSTGLNLNSNSAMESSALSLRLSLTSDQREASSRHSTFQ 300

Query: 301 AMPSFNNGEGIISVA 315
           AMPSFNNGEGIIS A
Sbjct: 301 AMPSFNNGEGIISAA 315

[Close]

BLAST of MS001955.1 vs. ExPASy TrEMBL
Match: A0A6J1E289 (transcription factor MYB1R1-like OS=Cucurbita moschata OX=3662 GN=LOC111429908 PE=4 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 4.8e-145
Identity = 275/315 (87.30%), Postives = 289/315 (91.75%), Query Frame = 0


Query: 1   MRSSTAVTNESAAAETGGGGPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHEAADVIAN 60
           MRS+ AV NES AAET GGGPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHEAADVI N
Sbjct: 1   MRSTAAVVNESPAAETCGGGPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHEAADVITN 60

Query: 61  ENKNDVVSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLIGLQRVGK 120
           ++KND+VSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFL+GLQ+VGK
Sbjct: 61  DSKNDLVSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLVGLQQVGK 120

Query: 121 GDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAEPMVEEPV 180
           GDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTA PMVEEP 
Sbjct: 121 GDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAAPMVEEPT 180

Query: 181 QHQEISSQSHSFTPSALPEISQNNVIPMVQTLPLTIGPTPLATP-TKNLMEKCGPGEVNT 240
           + QEI+SQSHSF PS  PEIS++NVIP+ QTLP + GP PLAT  TKNLMEKCGPGEVNT
Sbjct: 181 KRQEIASQSHSFIPSPPPEISKHNVIPVEQTLPFSFGPAPLATTLTKNLMEKCGPGEVNT 240

Query: 241 ENDGSLRLGLTDSIFSSNQTPNSTDLNLNSNSIMEPSALSLRLSLTSDHREASSRHSTFQ 300
           E+DGSL+LGL DSIF SNQ P ST LNLNSNS ME SALSLRLSLTSD REASSRHSTFQ
Sbjct: 241 ESDGSLKLGLKDSIFPSNQNPTSTGLNLNSNSAMESSALSLRLSLTSDQREASSRHSTFQ 300

Query: 301 AMPSFNNGEGIISVA 315
           AMPSFNNGEGIIS A
Sbjct: 301 AMPSFNNGEGIISAA 315

[Close]

BLAST of MS001955.1 vs. ExPASy TrEMBL
Match: A0A0A0LUD4 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G007850 PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.5e-138
Identity = 264/315 (83.81%), Postives = 282/315 (89.52%), Query Frame = 0


Query: 1   MRSSTAVTNESAAAETGGGGPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHEAADVIAN 60
           MRS++A  NESAAAETGGG PGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPH+A DVI N
Sbjct: 1   MRSTSAAVNESAAAETGGGSPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHDATDVIVN 60

Query: 61  E-NKNDVVSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLIGLQRVG 120
           + NKND+VSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLIGLQ+VG
Sbjct: 61  DNNKNDLVSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLIGLQQVG 120

Query: 121 KGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAEPMVEEP 180
           KGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTA PMVEEP
Sbjct: 121 KGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAAPMVEEP 180

Query: 181 VQHQEISSQSHSFTPSALPEISQNNVIPMVQTLPLTIGPTPLATPTKNLMEKCGPGEVNT 240
           +Q +EI SQSHSFTPS LPEIS+NN IP++QTLP++ GPTPLATPTKNL+E CGP EVNT
Sbjct: 181 LQRKEIPSQSHSFTPSTLPEISKNNAIPIIQTLPVSFGPTPLATPTKNLIENCGPREVNT 240

Query: 241 ENDGSLRLGLTDSIFSSNQTPNSTDLNLNSNSIMEPSALSLRLSLTSDHREASSRHSTFQ 300
           ENDGSL+L L+DSIFSSNQ  N       S S    SALSLRLSLTSD RE SSRHSTFQ
Sbjct: 241 ENDGSLKLALSDSIFSSNQIRN------ESPSSSSSSALSLRLSLTSDQRETSSRHSTFQ 300

Query: 301 AMPSFNNGEGIISVA 315
            +PSFNNG+GIIS A
Sbjct: 301 PIPSFNNGDGIISAA 309

[Close]

BLAST of MS001955.1 vs. ExPASy TrEMBL
Match: A0A5A7UWD5 (Transcription factor MYB1R1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002060 PE=4 SV=1)

HSP 1 Score: 494.6 bits (1272), Expect = 3.1e-136
Identity = 258/315 (81.90%), Postives = 281/315 (89.21%), Query Frame = 0


Query: 1   MRSSTAVTNESAAAETGGGGPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHEAADVIAN 60
           MRS+++  NESAAAETGGG PGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPH+A DVIAN
Sbjct: 1   MRSTSSSVNESAAAETGGGSPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHDATDVIAN 60

Query: 61  EN-KNDVVSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLIGLQRVG 120
           +N KND+VSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLIGLQ+VG
Sbjct: 61  DNYKNDLVSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLIGLQQVG 120

Query: 121 KGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAEPMVEEP 180
           KGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTA PMVEEP
Sbjct: 121 KGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAAPMVEEP 180

Query: 181 VQHQEISSQSHSFTPSALPEISQNNVIPMVQTLPLTIGPTPLATPTKNLMEKCGPGEVNT 240
           +Q +EI SQSHSFTPS LPEIS+N  IP++QTLP++ GPTPLATPTKNLME CGP EVNT
Sbjct: 181 LQRKEIPSQSHSFTPSTLPEISKNKAIPIIQTLPVSFGPTPLATPTKNLMENCGPREVNT 240

Query: 241 ENDGSLRLGLTDSIFSSNQTPNSTDLNLNSNSIMEPSALSLRLSLTSDHREASSRHSTFQ 300
           +NDGSL+L L+DSIFSSNQ  + +            +ALSLRLSLT D RE SSRHSTFQ
Sbjct: 241 QNDGSLKLALSDSIFSSNQIRHESS---------SAAALSLRLSLTPDQRETSSRHSTFQ 300

Query: 301 AMPSFNNGEGIISVA 315
           ++PSFNNG+GIIS A
Sbjct: 301 SIPSFNNGDGIISAA 306

[Close]

BLAST of MS001955.1 vs. TAIR 10
Match: AT1G74840.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 227.3 bits (578), Expect = 1.8e-59
Identity = 143/276 (51.81%), Postives = 181/276 (65.58%), Query Frame = 0


Query: 1   MRSSTAVTNESAAAETGGGGPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHEAADVIAN 60
           M   +  ++ES  A  G G   EIMLFGVRVV+D MRK VSLNNLS YEQ  E    I  
Sbjct: 1   MADGSTSSSESTTACAGSGTRREIMLFGVRVVLDPMRKCVSLNNLSDYEQTAETPK-IDG 60

Query: 61  ENKNDVVSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLIGLQRVGK 120
           E++++     + +   AGYASAD+A+P +  N + ERKRGVPWTEEEHKLFL+GLQRVGK
Sbjct: 61  EDRDE----QDMNKTPAGYASADEALPMSSSNGKIERKRGVPWTEEEHKLFLLGLQRVGK 120

Query: 121 GDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAEPMVEEPV 180
           GDW+GISRNFVKTRT TQVASHAQKYFLRRSNLNRRRRRSSLFD+TTDTV   PM E+  
Sbjct: 121 GDWKGISRNFVKTRTSTQVASHAQKYFLRRSNLNRRRRRSSLFDMTTDTVI--PMEED-- 180

Query: 181 QHQEISSQSHSFTPSALPEISQNNVIPMVQTLPLTIGPTPLATPTKNLMEKCGPGEVNTE 240
            HQ +  ++ S + S +PEI+  ++ P++Q  P          PT N       G++ + 
Sbjct: 181 -HQVLIQENTSQSSSPVPEINNFSIHPVMQVFP------EFPVPTGNQ----SYGQLTSS 240

Query: 241 NDGSLRLGLTDSIFSSNQTPNSTDLNLNSNSIMEPS 277
           N     + L    F S+  P S +L+L S+++ EPS
Sbjct: 241 N----LINLVPLTFQSSPAPLSLNLSLASSNLNEPS 252

[Close]

BLAST of MS001955.1 vs. TAIR 10
Match: AT1G74840.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 222.2 bits (565), Expect = 5.7e-58
Identity = 129/219 (58.90%), Postives = 157/219 (71.69%), Query Frame = 0


Query: 1   MRSSTAVTNESAAAETGGGGPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQPHEAADVIAN 60
           M   +  ++ES  A  G G   EIMLFGVRVV+D MRK VSLNNLS YEQ  E    I  
Sbjct: 1   MADGSTSSSESTTACAGSGTRREIMLFGVRVVLDPMRKCVSLNNLSDYEQTAETPK-IDG 60

Query: 61  ENKNDVVSVNNKDDVAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLIGLQRVGK 120
           E++++     + +   AGYASAD+A+P +  N + ERKRGVPWTEEEHKLFL+GLQRVGK
Sbjct: 61  EDRDE----QDMNKTPAGYASADEALPMSSSNGKIERKRGVPWTEEEHKLFLLGLQRVGK 120

Query: 121 GDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAEPMVEEPV 180
           GDW+GISRNFVKTRT TQVASHAQKYFLRRSNLNRRRRRSSLFD+TTDTV   PM E+  
Sbjct: 121 GDWKGISRNFVKTRTSTQVASHAQKYFLRRSNLNRRRRRSSLFDMTTDTVI--PMEED-- 180

Query: 181 QHQEISSQSHSFTPSALPEISQNNVIPMVQTLPLTIGPT 220
            HQ +  ++ S + S +PEI+  ++ P++Q  P    PT
Sbjct: 181 -HQVLIQENTSQSSSPVPEINNFSIHPVMQVFPEFPVPT 209

[Close]

BLAST of MS001955.1 vs. TAIR 10
Match: AT1G19000.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 204.5 bits (519), Expect = 1.2e-52
Identity = 147/315 (46.67%), Postives = 179/315 (56.83%), Query Frame = 0


Query: 11  SAAAETGG----GGPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQ--PHEAADVIANENKN 70
           S+++ETG     G   EIMLFGVRVVVD MRK VSLNNLS YE+  P +    I      
Sbjct: 5   SSSSETGDCGVTGKRDEIMLFGVRVVVDPMRKCVSLNNLSDYEKSSPEDEIPKIVTAGAG 64

Query: 71  DVVSVNNKDD---VAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLIGLQRVGKG 130
           D    N  D    VA GYASA+DAV  +  +    RKRGVPWTE EHK FLIGLQ+VGKG
Sbjct: 65  DGEDKNETDATVIVADGYASANDAVQIS--SSSGGRKRGVPWTENEHKRFLIGLQKVGKG 124

Query: 131 DWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAEPMVEEPVQ 190
           DW+GISRNFVK+RTPTQVASHAQKYFLRR+NLNRRRRRSSLFDITT+TVT   M ++P Q
Sbjct: 125 DWKGISRNFVKSRTPTQVASHAQKYFLRRTNLNRRRRRSSLFDITTETVTEMAMEQDPTQ 184

Query: 191 HQEISSQSHSFTPSALPEISQNNVIPMVQTLPLTIGPTPLATPTKNLMEKCGPGEVNTEN 250
                        S LPE + ++    +Q        T + T T+N  E           
Sbjct: 185 EN-----------SPLPETNISSGQQAMQVF------TDVPTKTENAPE----------- 244

Query: 251 DGSLRLGLTDSIFSSNQTPNSTDLNLNSNSIMEPSALSLRLSLTSD---HREASSRHSTF 310
                  L D              NLN+++    + LSL L L S    + + +SRHS F
Sbjct: 245 ----TFHLNDPYLVPVTFQAKPTFNLNTDA----APLSLNLCLASSFNLNEQPNSRHSAF 281

Query: 311 QAMPSFNNGEGIISV 314
             MPSF++G+   S+
Sbjct: 305 TMMPSFSDGDSNSSI 281

[Close]

BLAST of MS001955.1 vs. TAIR 10
Match: AT1G19000.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 204.5 bits (519), Expect = 1.2e-52
Identity = 147/315 (46.67%), Postives = 179/315 (56.83%), Query Frame = 0


Query: 11  SAAAETGG----GGPGEIMLFGVRVVVDSMRKSVSLNNLSQYEQ--PHEAADVIANENKN 70
           S+++ETG     G   EIMLFGVRVVVD MRK VSLNNLS YE+  P +    I      
Sbjct: 5   SSSSETGDCGVTGKRDEIMLFGVRVVVDPMRKCVSLNNLSDYEKSSPEDEIPKIVTAGAG 64

Query: 71  DVVSVNNKDD---VAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLIGLQRVGKG 130
           D    N  D    VA GYASA+DAV  +  +    RKRGVPWTE EHK FLIGLQ+VGKG
Sbjct: 65  DGEDKNETDATVIVADGYASANDAVQIS--SSSGGRKRGVPWTENEHKRFLIGLQKVGKG 124

Query: 131 DWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAEPMVEEPVQ 190
           DW+GISRNFVK+RTPTQVASHAQKYFLRR+NLNRRRRRSSLFDITT+TVT   M ++P Q
Sbjct: 125 DWKGISRNFVKSRTPTQVASHAQKYFLRRTNLNRRRRRSSLFDITTETVTEMAMEQDPTQ 184

Query: 191 HQEISSQSHSFTPSALPEISQNNVIPMVQTLPLTIGPTPLATPTKNLMEKCGPGEVNTEN 250
                        S LPE + ++    +Q        T + T T+N  E           
Sbjct: 185 EN-----------SPLPETNISSGQQAMQVF------TDVPTKTENAPE----------- 244

Query: 251 DGSLRLGLTDSIFSSNQTPNSTDLNLNSNSIMEPSALSLRLSLTSD---HREASSRHSTF 310
                  L D              NLN+++    + LSL L L S    + + +SRHS F
Sbjct: 245 ----TFHLNDPYLVPVTFQAKPTFNLNTDA----APLSLNLCLASSFNLNEQPNSRHSAF 281

Query: 311 QAMPSFNNGEGIISV 314
             MPSF++G+   S+
Sbjct: 305 TMMPSFSDGDSNSSI 281

[Close]

BLAST of MS001955.1 vs. TAIR 10
Match: AT1G70000.1 (myb-like transcription factor family protein )

HSP 1 Score: 172.6 bits (436), Expect = 5.2e-43
Identity = 103/167 (61.68%), Postives = 113/167 (67.66%), Query Frame = 0


Query: 18  GGGPGEIMLFGVRVVVDS---MRKSVSLNNLSQYEQPHEAADVIANENKNDVVSVNNKDD 77
           GGG   IMLFGVRV   S    RKSVS+NNLSQ++Q  +                N  DD
Sbjct: 32  GGGEKAIMLFGVRVTEASSSCFRKSVSMNNLSQFDQTPDP---------------NPTDD 91

Query: 78  VAAGYASADDAVPNARGNRERERKRGVPWTEEEHKLFLIGLQRVGKGDWRGISRNFVKTR 137
              GYAS  D V +A G R RERKRG PWTEEEH+LFL GL +VGKGDWRGISRNFVKTR
Sbjct: 92  --GGYAS--DDVVHASG-RNRERKRGTPWTEEEHRLFLTGLHKVGKGDWRGISRNFVKTR 151

Query: 138 TPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAEPMVEEPVQ 182
           TPTQVASHAQKYFLRR+N NRRRRRSSLFDIT D+       E  +Q
Sbjct: 152 TPTQVASHAQKYFLRRTNQNRRRRRSSLFDITPDSFIGSSKEENQLQ 178

The following BLAST results are available for this feature:

BLAST of MS001955.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135144.1	3.1e-167	99.36	transcription factor MYB1R1-like [Momordica charantia]	[more]
XP_022988403.1	7.5e-145	87.30	transcription factor MYB1R1-like [Cucurbita maxima]	[more]
XP_022921751.1	9.8e-145	87.30	transcription factor MYB1R1-like [Cucurbita moschata]	[more]
XP_023516314.1	5.4e-143	86.35	transcription factor MYB1R1-like [Cucurbita pepo subsp. pepo]	[more]
XP_038878277.1	3.5e-142	85.99	transcription factor MYB1R1-like [Benincasa hispida]	[more]

BLAST of MS001955.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2V9B0	1.7e-70	55.03	Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]
Q9LVS0	4.6e-36	54.43	Transcription factor KUA1 OS=Arabidopsis thaliana OX=3702 GN=KUA1 PE=1 SV=1	[more]
Q7XC57	4.0e-32	42.18	Transcription factor MYBS3 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS3 PE=...	[more]
Q9FKF9	5.1e-27	40.41	Probable transcription factor At5g61620 OS=Arabidopsis thaliana OX=3702 GN=At5g6...	[more]
B8A9B2	3.3e-26	71.05	Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 ...	[more]

BLAST of MS001955.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C0M2	1.5e-167	99.36	transcription factor MYB1R1-like OS=Momordica charantia OX=3673 GN=LOC111007186 ...	[more]
A0A6J1JM71	3.6e-145	87.30	transcription factor MYB1R1-like OS=Cucurbita maxima OX=3661 GN=LOC111485656 PE=...	[more]
A0A6J1E289	4.8e-145	87.30	transcription factor MYB1R1-like OS=Cucurbita moschata OX=3662 GN=LOC111429908 P...	[more]
A0A0A0LUD4	1.5e-138	83.81	HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G00785...	[more]
A0A5A7UWD5	3.1e-136	81.90	Transcription factor MYB1R1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]

BLAST of MS001955.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74840.1	1.8e-59	51.81	Homeodomain-like superfamily protein	[more]
AT1G74840.2	5.7e-58	58.90	Homeodomain-like superfamily protein	[more]
AT1G19000.1	1.2e-52	46.67	Homeodomain-like superfamily protein	[more]
AT1G19000.2	1.2e-52	46.67	Homeodomain-like superfamily protein	[more]
AT1G70000.1	5.2e-43	61.68	myb-like transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 99..149 e-value: 1.1E-8 score: 44.9
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 95..147 score: 7.444956
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 102..147 e-value: 1.64035E-8 score: 47.9554
None	No IPR available	GENE3D	1.10.10.60		coord: 101..153 e-value: 1.9E-14 score: 55.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..101
None	No IPR available	PANTHER	PTHR12374	TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED	coord: 16..314
None	No IPR available	PANTHER	PTHR12374:SF69	KIN2	coord: 16..314
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 98..149 e-value: 2.8E-16 score: 57.5
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 102..146 e-value: 1.9E-10 score: 40.7
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 95..151 score: 18.297935
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 98..151 score: 9.686179
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 97..152

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS001955	MS001955	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS001955.1-cds	MS001955.1-cds-scaffold30:1270718..1271015	CDS
MS001955.1-cds	MS001955.1-cds-scaffold30:1271313..1271521	CDS
MS001955.1-cds	MS001955.1-cds-scaffold30:1271947..1272381	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS001955.1	MS001955.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding