MS001838.1 (mRNA) Bitter gourd (TR) v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CCTCCAGAAGGTGATTTACTTCCACTACCCAAAATGCATAAACAAATTGCACGATTACAAGCAAACTTGCTTCAGGCAGCCACCAAAGGAGCCGTGAGGATTAAGCAAAGAAAAGGCACACATAGAGGACCTCCAGAAGGTGATTTACTTCCACTACCCAAAATGCATAAACAAATTGCACGATTACAAGCAAACTTGCTTCAGGCAGCCACCAAAGGAGCCGTGAGGATTAAGCAAAGAAAAGGCACACATAGAGGA CCTCCAGAAGGTGATTTACTTCCACTACCCAAAATGCATAAACAAATTGCACGATTACAAGCAAACTTGCTTCAGGCAGCCACCAAAGGAGCCGTGAGGATTAAGCAAAGAAAAGGCACACATAGAGGA PPEGDLLPLPKMHKQIARLQANLLQAATKGAVRIKQRKGTHRG Homology
BLAST of MS001838.1 vs. NCBI nr
Match: CAE5965704.1 (unnamed protein product [Arabidopsis arenosa]) HSP 1 Score: 57.8 bits (138), Expect = 2.7e-05 Identity = 28/43 (65.12%), Postives = 35/43 (81.40%), Query Frame = 0
BLAST of MS001838.1 vs. NCBI nr
Match: XP_002882160.1 (protein NUCLEAR FUSION DEFECTIVE 4 [Arabidopsis lyrata subsp. lyrata] >EFH58419.1 nodulin family protein [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 57.8 bits (138), Expect = 2.7e-05 Identity = 28/43 (65.12%), Postives = 35/43 (81.40%), Query Frame = 0
BLAST of MS001838.1 vs. NCBI nr
Match: KAG7575518.1 (MFS transporter superfamily [Arabidopsis thaliana x Arabidopsis arenosa] >KAG7580195.1 MFS transporter superfamily [Arabidopsis suecica]) HSP 1 Score: 57.8 bits (138), Expect = 2.7e-05 Identity = 28/43 (65.12%), Postives = 35/43 (81.40%), Query Frame = 0
BLAST of MS001838.1 vs. NCBI nr
Match: KCW53059.1 (hypothetical protein EUGRSUZ_J02353 [Eucalyptus grandis]) HSP 1 Score: 57.4 bits (137), Expect = 3.6e-05 Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 0
BLAST of MS001838.1 vs. NCBI nr
Match: AAC39501.1 (nodulin-like protein, partial [Arabidopsis thaliana]) HSP 1 Score: 56.6 bits (135), Expect = 6.1e-05 Identity = 27/43 (62.79%), Postives = 35/43 (81.40%), Query Frame = 0
BLAST of MS001838.1 vs. ExPASy TrEMBL
Match: D7L9J9 (Nodulin family protein OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_896049 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.3e-05 Identity = 28/43 (65.12%), Postives = 35/43 (81.40%), Query Frame = 0
BLAST of MS001838.1 vs. ExPASy TrEMBL
Match: A0A059AH36 (Nodulin-like domain-containing protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_J02353 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.7e-05 Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 0
BLAST of MS001838.1 vs. ExPASy TrEMBL
Match: Q9S7R2 (F1C9.29 protein OS=Arabidopsis thaliana OX=3702 GN=F1C9.29 PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 2.9e-05 Identity = 27/43 (62.79%), Postives = 35/43 (81.40%), Query Frame = 0
BLAST of MS001838.1 vs. ExPASy TrEMBL
Match: A0A384LFN8 ((thale cress) hypothetical protein OS=Arabidopsis thaliana OX=3702 GN=AXX17_At3g01070 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 2.9e-05 Identity = 27/43 (62.79%), Postives = 35/43 (81.40%), Query Frame = 0
BLAST of MS001838.1 vs. ExPASy TrEMBL
Match: A0A654F8G3 (Nodulin-like domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=AN1_LOCUS11456 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 2.9e-05 Identity = 27/43 (62.79%), Postives = 35/43 (81.40%), Query Frame = 0
BLAST of MS001838.1 vs. TAIR 10
Match: AT3G01930.1 (Major facilitator superfamily protein ) HSP 1 Score: 56.6 bits (135), Expect = 5.7e-09 Identity = 27/43 (62.79%), Postives = 35/43 (81.40%), Query Frame = 0
BLAST of MS001838.1 vs. TAIR 10
Match: AT3G01930.2 (Major facilitator superfamily protein ) HSP 1 Score: 56.6 bits (135), Expect = 5.7e-09 Identity = 27/43 (62.79%), Postives = 35/43 (81.40%), Query Frame = 0
BLAST of MS001838.1 vs. TAIR 10
Match: AT5G14120.1 (Major facilitator superfamily protein ) HSP 1 Score: 53.5 bits (127), Expect = 4.8e-08 Identity = 25/43 (58.14%), Postives = 33/43 (76.74%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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