MS001828.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS001828.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	surfeit locus protein 6-like
Location	scaffold30: 268422 .. 269474 (-)
Sequence length	1053
RNA-Seq Expression	MS001828.1
Synteny	MS001828.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAACAAAAAGTTGAAGACTGCTGCAACTTCCAATTCTAGCATTGATCTGAAGTCCATAATTCATCAGCATGCTCTGTTTTTTGACAAGTTAGTGGAGCTAATCCCTGCAAGGTTCTATTTACCCAATGATGAAAAGGAGAAACCTTGGTTTCAGGGCCTTAGCAAGACTGAGAAGGTTTTGGCTAAGAAGGAATCGAAAGAAAACCTTAAGAAAGCCCGAAGAGATCGCATGGATCCGGAAAAGTCTTCCAAATCAACCCTTGATTTGCTCAAGCAAAGCTTGGAAAAGAGCAAGTTAAATGATGAAAGTGATGATGATAATGAAATGGATGTCAAGCCAATGACATCTGGGATGGATGGTGATGATCGGTCAGTGACATATGAAGAACTTCGACAACGTCTCCATCGAAAGATTGAAGAGTTCCGATCAAATAGAAATACAGGATGCTCAAATAGGGAAAAGAAGAGGAATGAAAGAAATGAAAGGAGGGAGCTTGTTCAAAAGAAACGCAAGAAAGAGAATGGGCCTGAGGAAAAGAAATCAGCAAATTACCACTCAACAGATGAAGTGGAGAAGAATGTAGTTGAAGCCTCTAAAGAACTTGCCTTCAGTCATGTCAAACTCGGGACTGAAGAAGAGCATGGGAAGAAAAAGAAGAGAAAGCTCTCCAAGTTGGAGGAGCTGGAACGTGCTAAAAAGTTGGATGAAGCAAAGAAAGATCCTGAGAAGGGCGAGACAATCTCGAAGAAGCATTCTTGGAAAGCGGCAACAAGTAGAGCTGCTGGGATTAAGGTTCATGATGATCCAAAACTCCTGATGAAGAGCTTGAAGAAGGAAAAGAAACAGCAGCTGAAGAATGTTGAGAAATGGAAAGAGAGGATTGAAACCACCCAGAAGATGAAAGCAGAAAGACAACAAAAGAGGTCGGAAAACATATCACAGAAAATTCATGATAAGAAGATGAAACGAATTGCAAAGAGGGAGAAGAAACTTATGCGCCCTGGGTTCGAAGGTCGCAAGGAAGGTTTCATTAACGAAGGCGCAACA

mRNA sequence

ATGAAAAACAAAAAGTTGAAGACTGCTGCAACTTCCAATTCTAGCATTGATCTGAAGTCCATAATTCATCAGCATGCTCTGTTTTTTGACAAGTTAGTGGAGCTAATCCCTGCAAGGTTCTATTTACCCAATGATGAAAAGGAGAAACCTTGGTTTCAGGGCCTTAGCAAGACTGAGAAGGTTTTGGCTAAGAAGGAATCGAAAGAAAACCTTAAGAAAGCCCGAAGAGATCGCATGGATCCGGAAAAGTCTTCCAAATCAACCCTTGATTTGCTCAAGCAAAGCTTGGAAAAGAGCAAGTTAAATGATGAAAGTGATGATGATAATGAAATGGATGTCAAGCCAATGACATCTGGGATGGATGGTGATGATCGGTCAGTGACATATGAAGAACTTCGACAACGTCTCCATCGAAAGATTGAAGAGTTCCGATCAAATAGAAATACAGGATGCTCAAATAGGGAAAAGAAGAGGAATGAAAGAAATGAAAGGAGGGAGCTTGTTCAAAAGAAACGCAAGAAAGAGAATGGGCCTGAGGAAAAGAAATCAGCAAATTACCACTCAACAGATGAAGTGGAGAAGAATGTAGTTGAAGCCTCTAAAGAACTTGCCTTCAGTCATGTCAAACTCGGGACTGAAGAAGAGCATGGGAAGAAAAAGAAGAGAAAGCTCTCCAAGTTGGAGGAGCTGGAACGTGCTAAAAAGTTGGATGAAGCAAAGAAAGATCCTGAGAAGGGCGAGACAATCTCGAAGAAGCATTCTTGGAAAGCGGCAACAAGTAGAGCTGCTGGGATTAAGGTTCATGATGATCCAAAACTCCTGATGAAGAGCTTGAAGAAGGAAAAGAAACAGCAGCTGAAGAATGTTGAGAAATGGAAAGAGAGGATTGAAACCACCCAGAAGATGAAAGCAGAAAGACAACAAAAGAGGTCGGAAAACATATCACAGAAAATTCATGATAAGAAGATGAAACGAATTGCAAAGAGGGAGAAGAAACTTATGCGCCCTGGGTTCGAAGGTCGCAAGGAAGGTTTCATTAACGAAGGCGCAACA

Coding sequence (CDS)

ATGAAAAACAAAAAGTTGAAGACTGCTGCAACTTCCAATTCTAGCATTGATCTGAAGTCCATAATTCATCAGCATGCTCTGTTTTTTGACAAGTTAGTGGAGCTAATCCCTGCAAGGTTCTATTTACCCAATGATGAAAAGGAGAAACCTTGGTTTCAGGGCCTTAGCAAGACTGAGAAGGTTTTGGCTAAGAAGGAATCGAAAGAAAACCTTAAGAAAGCCCGAAGAGATCGCATGGATCCGGAAAAGTCTTCCAAATCAACCCTTGATTTGCTCAAGCAAAGCTTGGAAAAGAGCAAGTTAAATGATGAAAGTGATGATGATAATGAAATGGATGTCAAGCCAATGACATCTGGGATGGATGGTGATGATCGGTCAGTGACATATGAAGAACTTCGACAACGTCTCCATCGAAAGATTGAAGAGTTCCGATCAAATAGAAATACAGGATGCTCAAATAGGGAAAAGAAGAGGAATGAAAGAAATGAAAGGAGGGAGCTTGTTCAAAAGAAACGCAAGAAAGAGAATGGGCCTGAGGAAAAGAAATCAGCAAATTACCACTCAACAGATGAAGTGGAGAAGAATGTAGTTGAAGCCTCTAAAGAACTTGCCTTCAGTCATGTCAAACTCGGGACTGAAGAAGAGCATGGGAAGAAAAAGAAGAGAAAGCTCTCCAAGTTGGAGGAGCTGGAACGTGCTAAAAAGTTGGATGAAGCAAAGAAAGATCCTGAGAAGGGCGAGACAATCTCGAAGAAGCATTCTTGGAAAGCGGCAACAAGTAGAGCTGCTGGGATTAAGGTTCATGATGATCCAAAACTCCTGATGAAGAGCTTGAAGAAGGAAAAGAAACAGCAGCTGAAGAATGTTGAGAAATGGAAAGAGAGGATTGAAACCACCCAGAAGATGAAAGCAGAAAGACAACAAAAGAGGTCGGAAAACATATCACAGAAAATTCATGATAAGAAGATGAAACGAATTGCAAAGAGGGAGAAGAAACTTATGCGCCCTGGGTTCGAAGGTCGCAAGGAAGGTTTCATTAACGAAGGCGCAACA

Protein sequence

MKNKKLKTAATSNSSIDLKSIIHQHALFFDKLVELIPARFYLPNDEKEKPWFQGLSKTEKVLAKKESKENLKKARRDRMDPEKSSKSTLDLLKQSLEKSKLNDESDDDNEMDVKPMTSGMDGDDRSVTYEELRQRLHRKIEEFRSNRNTGCSNREKKRNERNERRELVQKKRKKENGPEEKKSANYHSTDEVEKNVVEASKELAFSHVKLGTEEEHGKKKKRKLSKLEELERAKKLDEAKKDPEKGETISKKHSWKAATSRAAGIKVHDDPKLLMKSLKKEKKQQLKNVEKWKERIETTQKMKAERQQKRSENISQKIHDKKMKRIAKREKKLMRPGFEGRKEGFINEGAT

Homology

[Close]

BLAST of MS001828.1 vs. NCBI nr
Match: XP_022135417.1 (ribosomal RNA-processing protein 14-C-like [Momordica charantia])

HSP 1 Score: 626.3 bits (1614), Expect = 1.6e-175
Identity = 347/349 (99.43%), Postives = 348/349 (99.71%), Query Frame = 0


Query: 1   MKNKKLKTAATSNSSIDLKSIIHQHALFFDKLVELIPARFYLPNDEKEKPWFQGLSKTEK 60
           MKNKKLKTAATSNSSIDLKSIIHQHALFFDKLVELIPARFYLPNDEKEKPWFQGLSKTEK
Sbjct: 1   MKNKKLKTAATSNSSIDLKSIIHQHALFFDKLVELIPARFYLPNDEKEKPWFQGLSKTEK 60

Query: 61  VLAKKESKENLKKARRDRMDPEKSSKSTLDLLKQSLEKSKLNDESDDDNEMDVKPMTSGM 120
           VLAKKESKENLKKARRDRMDPEKSSKSTLDLLKQSLEKSKLNDESDDDNEMDVKPMTSGM
Sbjct: 61  VLAKKESKENLKKARRDRMDPEKSSKSTLDLLKQSLEKSKLNDESDDDNEMDVKPMTSGM 120

Query: 121 DGDDRSVTYEELRQRLHRKIEEFRSNRNTGCSNREKKRNERNERRELVQKKRKKENGPEE 180
           DGDD SVTYEELRQRLHRKIEEFRSNRNTGCSNREKKR+ERNERRELVQKKRKKENGPEE
Sbjct: 121 DGDDPSVTYEELRQRLHRKIEEFRSNRNTGCSNREKKRSERNERRELVQKKRKKENGPEE 180

Query: 181 KKSANYHSTDEVEKNVVEASKELAFSHVKLGTEEEHGKKKKRKLSKLEELERAKKLDEAK 240
           KKSANYHSTDEVEKNVVEASKELAFSHVKLGTEEEHGKKKKRKLSKLEELERAKKLDEAK
Sbjct: 181 KKSANYHSTDEVEKNVVEASKELAFSHVKLGTEEEHGKKKKRKLSKLEELERAKKLDEAK 240

Query: 241 KDPEKGETISKKHSWKAATSRAAGIKVHDDPKLLMKSLKKEKKQQLKNVEKWKERIETTQ 300
           KDPEKGETISKKHSWKAATSRAAGIKVHDDPKLLMKSLKKEKKQQLKNVEKWKERIETTQ
Sbjct: 241 KDPEKGETISKKHSWKAATSRAAGIKVHDDPKLLMKSLKKEKKQQLKNVEKWKERIETTQ 300

Query: 301 KMKAERQQKRSENISQKIHDKKMKRIAKREKKLMRPGFEGRKEGFINEG 350
           KMKAERQQKRSENISQKIHDKKMKRIAKREKKLMRPGFEGRKEGFINEG
Sbjct: 301 KMKAERQQKRSENISQKIHDKKMKRIAKREKKLMRPGFEGRKEGFINEG 349

[Close]

BLAST of MS001828.1 vs. NCBI nr
Match: KAG7021387.1 (hypothetical protein SDJN02_15112 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 559.7 bits (1441), Expect = 1.8e-155
Identity = 313/348 (89.94%), Postives = 332/348 (95.40%), Query Frame = 0


Query: 1   MKNKKLKTAATSNSSI-DLKSIIHQHALFFDKLVELIPARFYLPNDEKEKPWFQGLSKTE 60
           MK+KK KTA TS S+I DLKSIIHQHA+FFDKLVELIPARFYLPNDE +KPWFQGLS TE
Sbjct: 1   MKSKKSKTATTSVSTIVDLKSIIHQHAMFFDKLVELIPARFYLPNDENDKPWFQGLSNTE 60

Query: 61  KVLAKKESKENLKKARRDRMDPEKSSKSTLDLLKQSLEKSKLNDESDDDNEMDVKPMTSG 120
           K LAKKESKENLKKARRDRMDPEKS++STLDLLKQ+LEK+KL DES DDNEMDVKP+TSG
Sbjct: 61  KALAKKESKENLKKARRDRMDPEKSARSTLDLLKQNLEKNKLKDES-DDNEMDVKPVTSG 120

Query: 121 MDGDDRSVTYEELRQRLHRKIEEFRSNRNTGCSNREKKRNERNERRELVQKKRKKENGPE 180
           +DGD +SVTYEELRQRLHRKIEEFR+NRNTGCSNREKKRNERNERREL+QKKRK+E+GPE
Sbjct: 121 LDGDVQSVTYEELRQRLHRKIEEFRANRNTGCSNREKKRNERNERRELIQKKRKREHGPE 180

Query: 181 EKKSANYHSTDEVEKNVVEASKELAFSHVKLGTEEEHGKKKKRKLSKLEELERAKKLDEA 240
           EKK A +HS DEVEKNV EASKELAFSHVKLGTEEEHGKKKKRKLSKLEELERAKKLDEA
Sbjct: 181 EKKLAGHHSRDEVEKNVDEASKELAFSHVKLGTEEEHGKKKKRKLSKLEELERAKKLDEA 240

Query: 241 KKDPEKGETISKKHSWKAATSRAAGIKVHDDPKLLMKSLKKEKKQQLKNVEKWKERIETT 300
           K+DPEKGE ISKKHSWKAATSRAAG KVHDDPKLLMKSLKKEKKQQLKNVEKWK+RIETT
Sbjct: 241 KRDPEKGEIISKKHSWKAATSRAAGAKVHDDPKLLMKSLKKEKKQQLKNVEKWKDRIETT 300

Query: 301 QKMKAERQQKRSENISQKIHDKKMKRIAKREKKLMRPGFEGRKEGFIN 348
           QKMKAERQQKRSENISQKIHDKKM+RIAKREKKLMRPGFEGRKEGFIN
Sbjct: 301 QKMKAERQQKRSENISQKIHDKKMRRIAKREKKLMRPGFEGRKEGFIN 347

[Close]

BLAST of MS001828.1 vs. NCBI nr
Match: XP_023531300.1 (surfeit locus protein 6-like [Cucurbita pepo subsp. pepo] >XP_023531301.1 surfeit locus protein 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 559.3 bits (1440), Expect = 2.4e-155
Identity = 310/347 (89.34%), Postives = 329/347 (94.81%), Query Frame = 0


Query: 1   MKNKKLKTAATSNSSIDLKSIIHQHALFFDKLVELIPARFYLPNDEKEKPWFQGLSKTEK 60
           MK KK KTA TS S +DLKSIIHQHA+FFDKLVELIPARFYLPNDE +KPWFQGLS TEK
Sbjct: 1   MKTKKSKTATTSVSIVDLKSIIHQHAMFFDKLVELIPARFYLPNDENDKPWFQGLSNTEK 60

Query: 61  VLAKKESKENLKKARRDRMDPEKSSKSTLDLLKQSLEKSKLNDESDDDNEMDVKPMTSGM 120
            LAKKESKENLKKARRDRMDPEKS++ST+DLLKQ+LEK+KL DES DDNEMDVKP+TSG+
Sbjct: 61  ALAKKESKENLKKARRDRMDPEKSARSTVDLLKQNLEKNKLKDES-DDNEMDVKPVTSGL 120

Query: 121 DGDDRSVTYEELRQRLHRKIEEFRSNRNTGCSNREKKRNERNERRELVQKKRKKENGPEE 180
           DGD +SVTYEELRQRLHRKIEEFR+NRNTGCSNREKKRNERNERREL+QKKRK+E+GPEE
Sbjct: 121 DGDVQSVTYEELRQRLHRKIEEFRANRNTGCSNREKKRNERNERRELIQKKRKREHGPEE 180

Query: 181 KKSANYHSTDEVEKNVVEASKELAFSHVKLGTEEEHGKKKKRKLSKLEELERAKKLDEAK 240
           KK A +HS DEVEKNV EASKELAFSHVKLGTEEEHGKKKKRKLSKLEELERAKKLDEAK
Sbjct: 181 KKLAGHHSRDEVEKNVDEASKELAFSHVKLGTEEEHGKKKKRKLSKLEELERAKKLDEAK 240

Query: 241 KDPEKGETISKKHSWKAATSRAAGIKVHDDPKLLMKSLKKEKKQQLKNVEKWKERIETTQ 300
           +DPEKGE ISKKHSWKAATSRAAG KVHDDPKLLMKSLKKEKKQQLKNVEKWK+RIETTQ
Sbjct: 241 RDPEKGEIISKKHSWKAATSRAAGAKVHDDPKLLMKSLKKEKKQQLKNVEKWKDRIETTQ 300

Query: 301 KMKAERQQKRSENISQKIHDKKMKRIAKREKKLMRPGFEGRKEGFIN 348
           KMKAERQQKRSENIS KIHDKKM+RIAKREKKLMRPGFEGRKEGFIN
Sbjct: 301 KMKAERQQKRSENISHKIHDKKMRRIAKREKKLMRPGFEGRKEGFIN 346

[Close]

BLAST of MS001828.1 vs. NCBI nr
Match: XP_022933507.1 (surfeit locus protein 6-like [Cucurbita moschata])

HSP 1 Score: 558.1 bits (1437), Expect = 5.2e-155
Identity = 312/348 (89.66%), Postives = 331/348 (95.11%), Query Frame = 0


Query: 1   MKNKKLKTAATSNSSI-DLKSIIHQHALFFDKLVELIPARFYLPNDEKEKPWFQGLSKTE 60
           MK+KK KTA TS S+I DLKSIIHQHA+FFDKLVELIPARFYLPNDE +KPWFQGLS TE
Sbjct: 1   MKSKKSKTATTSVSTIVDLKSIIHQHAMFFDKLVELIPARFYLPNDENDKPWFQGLSNTE 60

Query: 61  KVLAKKESKENLKKARRDRMDPEKSSKSTLDLLKQSLEKSKLNDESDDDNEMDVKPMTSG 120
           K LAKKESKENLKKARRDRMDPEKS++STLDLLKQ+LEK+KL DES DDNEMDVKP+TSG
Sbjct: 61  KALAKKESKENLKKARRDRMDPEKSARSTLDLLKQNLEKNKLKDES-DDNEMDVKPVTSG 120

Query: 121 MDGDDRSVTYEELRQRLHRKIEEFRSNRNTGCSNREKKRNERNERRELVQKKRKKENGPE 180
           +DGD +SVTYEELRQRLHRKIEEFR+NRNTGCSNREKKRNERNERREL+QKKRK+E+GPE
Sbjct: 121 LDGDVQSVTYEELRQRLHRKIEEFRANRNTGCSNREKKRNERNERRELIQKKRKREHGPE 180

Query: 181 EKKSANYHSTDEVEKNVVEASKELAFSHVKLGTEEEHGKKKKRKLSKLEELERAKKLDEA 240
           EKK A +HS DEVEKNV EASKELAFSHVKLGTEEEHGKKKKRKLSKLEELERAKKLDEA
Sbjct: 181 EKKLAGHHSRDEVEKNVDEASKELAFSHVKLGTEEEHGKKKKRKLSKLEELERAKKLDEA 240

Query: 241 KKDPEKGETISKKHSWKAATSRAAGIKVHDDPKLLMKSLKKEKKQQLKNVEKWKERIETT 300
           K+DPEKGE ISKKHSWKAATSRAAG KVHDDPKLLMKSLKKEKKQQLKNVEKWK+RIETT
Sbjct: 241 KRDPEKGEIISKKHSWKAATSRAAGAKVHDDPKLLMKSLKKEKKQQLKNVEKWKDRIETT 300

Query: 301 QKMKAERQQKRSENISQKIHDKKMKRIAKREKKLMRPGFEGRKEGFIN 348
           QKMKAERQQKRSENISQKIHDKKM+RI KREKKLMRPGFEGRKEGFIN
Sbjct: 301 QKMKAERQQKRSENISQKIHDKKMRRITKREKKLMRPGFEGRKEGFIN 347

[Close]

BLAST of MS001828.1 vs. NCBI nr
Match: XP_023007532.1 (ribosomal RNA-processing protein 14-C-like [Cucurbita maxima] >XP_023007538.1 ribosomal RNA-processing protein 14-C-like [Cucurbita maxima])

HSP 1 Score: 555.8 bits (1431), Expect = 2.6e-154
Identity = 309/347 (89.05%), Postives = 329/347 (94.81%), Query Frame = 0


Query: 1   MKNKKLKTAATSNSSIDLKSIIHQHALFFDKLVELIPARFYLPNDEKEKPWFQGLSKTEK 60
           MK+KK KTA TS S +DLKSIIHQ+A+FFDKLVELIPARFYLPNDE +KPWFQGLS TEK
Sbjct: 1   MKSKKSKTATTSVSIVDLKSIIHQYAMFFDKLVELIPARFYLPNDENDKPWFQGLSNTEK 60

Query: 61  VLAKKESKENLKKARRDRMDPEKSSKSTLDLLKQSLEKSKLNDESDDDNEMDVKPMTSGM 120
            LAKKESKENLKKARRDRMDPEKS++STLDLLKQ+LEK KL DES DDNEMDVKP+TSG+
Sbjct: 61  ALAKKESKENLKKARRDRMDPEKSARSTLDLLKQNLEKKKLEDES-DDNEMDVKPVTSGL 120

Query: 121 DGDDRSVTYEELRQRLHRKIEEFRSNRNTGCSNREKKRNERNERRELVQKKRKKENGPEE 180
           DGD +SVTYEELRQRLHRKIEEFR+NRNTGCSNREKKRNERNERREL+QKKRK+ +GPEE
Sbjct: 121 DGDVQSVTYEELRQRLHRKIEEFRANRNTGCSNREKKRNERNERRELIQKKRKRGHGPEE 180

Query: 181 KKSANYHSTDEVEKNVVEASKELAFSHVKLGTEEEHGKKKKRKLSKLEELERAKKLDEAK 240
           KK A +HS DEVEKNV EASKELAFSHVKLGTEEEHGKKKKRKLSKLEELERAKKLDEAK
Sbjct: 181 KKLAGHHSRDEVEKNVDEASKELAFSHVKLGTEEEHGKKKKRKLSKLEELERAKKLDEAK 240

Query: 241 KDPEKGETISKKHSWKAATSRAAGIKVHDDPKLLMKSLKKEKKQQLKNVEKWKERIETTQ 300
           +DPEKGE ISKKHSWKAATSRAAG KVHDDPKLLMKSLKKEKKQQLKNVEKWK+RIETTQ
Sbjct: 241 RDPEKGEIISKKHSWKAATSRAAGAKVHDDPKLLMKSLKKEKKQQLKNVEKWKDRIETTQ 300

Query: 301 KMKAERQQKRSENISQKIHDKKMKRIAKREKKLMRPGFEGRKEGFIN 348
           KMKAERQQKRSENISQKIHDKKM+RIAKREKKL+RPGFEGRKEGFIN
Sbjct: 301 KMKAERQQKRSENISQKIHDKKMRRIAKREKKLVRPGFEGRKEGFIN 346

[Close]

BLAST of MS001828.1 vs. ExPASy TrEMBL
Match: A0A6J1C2M6 (ribosomal RNA-processing protein 14-C-like OS=Momordica charantia OX=3673 GN=LOC111007374 PE=3 SV=1)

HSP 1 Score: 626.3 bits (1614), Expect = 7.6e-176
Identity = 347/349 (99.43%), Postives = 348/349 (99.71%), Query Frame = 0


Query: 1   MKNKKLKTAATSNSSIDLKSIIHQHALFFDKLVELIPARFYLPNDEKEKPWFQGLSKTEK 60
           MKNKKLKTAATSNSSIDLKSIIHQHALFFDKLVELIPARFYLPNDEKEKPWFQGLSKTEK
Sbjct: 1   MKNKKLKTAATSNSSIDLKSIIHQHALFFDKLVELIPARFYLPNDEKEKPWFQGLSKTEK 60

Query: 61  VLAKKESKENLKKARRDRMDPEKSSKSTLDLLKQSLEKSKLNDESDDDNEMDVKPMTSGM 120
           VLAKKESKENLKKARRDRMDPEKSSKSTLDLLKQSLEKSKLNDESDDDNEMDVKPMTSGM
Sbjct: 61  VLAKKESKENLKKARRDRMDPEKSSKSTLDLLKQSLEKSKLNDESDDDNEMDVKPMTSGM 120

Query: 121 DGDDRSVTYEELRQRLHRKIEEFRSNRNTGCSNREKKRNERNERRELVQKKRKKENGPEE 180
           DGDD SVTYEELRQRLHRKIEEFRSNRNTGCSNREKKR+ERNERRELVQKKRKKENGPEE
Sbjct: 121 DGDDPSVTYEELRQRLHRKIEEFRSNRNTGCSNREKKRSERNERRELVQKKRKKENGPEE 180

Query: 181 KKSANYHSTDEVEKNVVEASKELAFSHVKLGTEEEHGKKKKRKLSKLEELERAKKLDEAK 240
           KKSANYHSTDEVEKNVVEASKELAFSHVKLGTEEEHGKKKKRKLSKLEELERAKKLDEAK
Sbjct: 181 KKSANYHSTDEVEKNVVEASKELAFSHVKLGTEEEHGKKKKRKLSKLEELERAKKLDEAK 240

Query: 241 KDPEKGETISKKHSWKAATSRAAGIKVHDDPKLLMKSLKKEKKQQLKNVEKWKERIETTQ 300
           KDPEKGETISKKHSWKAATSRAAGIKVHDDPKLLMKSLKKEKKQQLKNVEKWKERIETTQ
Sbjct: 241 KDPEKGETISKKHSWKAATSRAAGIKVHDDPKLLMKSLKKEKKQQLKNVEKWKERIETTQ 300

Query: 301 KMKAERQQKRSENISQKIHDKKMKRIAKREKKLMRPGFEGRKEGFINEG 350
           KMKAERQQKRSENISQKIHDKKMKRIAKREKKLMRPGFEGRKEGFINEG
Sbjct: 301 KMKAERQQKRSENISQKIHDKKMKRIAKREKKLMRPGFEGRKEGFINEG 349

[Close]

BLAST of MS001828.1 vs. ExPASy TrEMBL
Match: A0A6J1EZY5 (surfeit locus protein 6-like OS=Cucurbita moschata OX=3662 GN=LOC111440908 PE=3 SV=1)

HSP 1 Score: 558.1 bits (1437), Expect = 2.5e-155
Identity = 312/348 (89.66%), Postives = 331/348 (95.11%), Query Frame = 0


Query: 1   MKNKKLKTAATSNSSI-DLKSIIHQHALFFDKLVELIPARFYLPNDEKEKPWFQGLSKTE 60
           MK+KK KTA TS S+I DLKSIIHQHA+FFDKLVELIPARFYLPNDE +KPWFQGLS TE
Sbjct: 1   MKSKKSKTATTSVSTIVDLKSIIHQHAMFFDKLVELIPARFYLPNDENDKPWFQGLSNTE 60

Query: 61  KVLAKKESKENLKKARRDRMDPEKSSKSTLDLLKQSLEKSKLNDESDDDNEMDVKPMTSG 120
           K LAKKESKENLKKARRDRMDPEKS++STLDLLKQ+LEK+KL DES DDNEMDVKP+TSG
Sbjct: 61  KALAKKESKENLKKARRDRMDPEKSARSTLDLLKQNLEKNKLKDES-DDNEMDVKPVTSG 120

Query: 121 MDGDDRSVTYEELRQRLHRKIEEFRSNRNTGCSNREKKRNERNERRELVQKKRKKENGPE 180
           +DGD +SVTYEELRQRLHRKIEEFR+NRNTGCSNREKKRNERNERREL+QKKRK+E+GPE
Sbjct: 121 LDGDVQSVTYEELRQRLHRKIEEFRANRNTGCSNREKKRNERNERRELIQKKRKREHGPE 180

Query: 181 EKKSANYHSTDEVEKNVVEASKELAFSHVKLGTEEEHGKKKKRKLSKLEELERAKKLDEA 240
           EKK A +HS DEVEKNV EASKELAFSHVKLGTEEEHGKKKKRKLSKLEELERAKKLDEA
Sbjct: 181 EKKLAGHHSRDEVEKNVDEASKELAFSHVKLGTEEEHGKKKKRKLSKLEELERAKKLDEA 240

Query: 241 KKDPEKGETISKKHSWKAATSRAAGIKVHDDPKLLMKSLKKEKKQQLKNVEKWKERIETT 300
           K+DPEKGE ISKKHSWKAATSRAAG KVHDDPKLLMKSLKKEKKQQLKNVEKWK+RIETT
Sbjct: 241 KRDPEKGEIISKKHSWKAATSRAAGAKVHDDPKLLMKSLKKEKKQQLKNVEKWKDRIETT 300

Query: 301 QKMKAERQQKRSENISQKIHDKKMKRIAKREKKLMRPGFEGRKEGFIN 348
           QKMKAERQQKRSENISQKIHDKKM+RI KREKKLMRPGFEGRKEGFIN
Sbjct: 301 QKMKAERQQKRSENISQKIHDKKMRRITKREKKLMRPGFEGRKEGFIN 347

[Close]

BLAST of MS001828.1 vs. ExPASy TrEMBL
Match: A0A6J1L7X8 (ribosomal RNA-processing protein 14-C-like OS=Cucurbita maxima OX=3661 GN=LOC111499989 PE=3 SV=1)

HSP 1 Score: 555.8 bits (1431), Expect = 1.3e-154
Identity = 309/347 (89.05%), Postives = 329/347 (94.81%), Query Frame = 0


Query: 1   MKNKKLKTAATSNSSIDLKSIIHQHALFFDKLVELIPARFYLPNDEKEKPWFQGLSKTEK 60
           MK+KK KTA TS S +DLKSIIHQ+A+FFDKLVELIPARFYLPNDE +KPWFQGLS TEK
Sbjct: 1   MKSKKSKTATTSVSIVDLKSIIHQYAMFFDKLVELIPARFYLPNDENDKPWFQGLSNTEK 60

Query: 61  VLAKKESKENLKKARRDRMDPEKSSKSTLDLLKQSLEKSKLNDESDDDNEMDVKPMTSGM 120
            LAKKESKENLKKARRDRMDPEKS++STLDLLKQ+LEK KL DES DDNEMDVKP+TSG+
Sbjct: 61  ALAKKESKENLKKARRDRMDPEKSARSTLDLLKQNLEKKKLEDES-DDNEMDVKPVTSGL 120

Query: 121 DGDDRSVTYEELRQRLHRKIEEFRSNRNTGCSNREKKRNERNERRELVQKKRKKENGPEE 180
           DGD +SVTYEELRQRLHRKIEEFR+NRNTGCSNREKKRNERNERREL+QKKRK+ +GPEE
Sbjct: 121 DGDVQSVTYEELRQRLHRKIEEFRANRNTGCSNREKKRNERNERRELIQKKRKRGHGPEE 180

Query: 181 KKSANYHSTDEVEKNVVEASKELAFSHVKLGTEEEHGKKKKRKLSKLEELERAKKLDEAK 240
           KK A +HS DEVEKNV EASKELAFSHVKLGTEEEHGKKKKRKLSKLEELERAKKLDEAK
Sbjct: 181 KKLAGHHSRDEVEKNVDEASKELAFSHVKLGTEEEHGKKKKRKLSKLEELERAKKLDEAK 240

Query: 241 KDPEKGETISKKHSWKAATSRAAGIKVHDDPKLLMKSLKKEKKQQLKNVEKWKERIETTQ 300
           +DPEKGE ISKKHSWKAATSRAAG KVHDDPKLLMKSLKKEKKQQLKNVEKWK+RIETTQ
Sbjct: 241 RDPEKGEIISKKHSWKAATSRAAGAKVHDDPKLLMKSLKKEKKQQLKNVEKWKDRIETTQ 300

Query: 301 KMKAERQQKRSENISQKIHDKKMKRIAKREKKLMRPGFEGRKEGFIN 348
           KMKAERQQKRSENISQKIHDKKM+RIAKREKKL+RPGFEGRKEGFIN
Sbjct: 301 KMKAERQQKRSENISQKIHDKKMRRIAKREKKLVRPGFEGRKEGFIN 346

[Close]

BLAST of MS001828.1 vs. ExPASy TrEMBL
Match: A0A6J1CA47 (ribosomal RNA-processing protein 14-C-like OS=Momordica charantia OX=3673 GN=LOC111009704 PE=3 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 6.1e-149
Identity = 305/350 (87.14%), Postives = 325/350 (92.86%), Query Frame = 0


Query: 2   KNKKLKTAATSNSSIDLKSIIHQHALFFDKLVELIPARFYLPNDEKEKPWFQGLSKTEKV 61
           K KK KT   SNS  DLKSIIHQHALFFDKLVELIPARFYLPNDEK+KPWFQGLSKTEKV
Sbjct: 22  KKKKQKTVGDSNSGADLKSIIHQHALFFDKLVELIPARFYLPNDEKDKPWFQGLSKTEKV 81

Query: 62  LAKKESKENLKKARRDRMDPEKSSKSTLDLLKQSLEKSKLNDESDDDNEMDVKPMTSGMD 121
           LAKKESKENLKKARRDRMDPEK SKSTLDLLKQSLEK KL +ESDD+ E DVKPMTSG+D
Sbjct: 82  LAKKESKENLKKARRDRMDPEKYSKSTLDLLKQSLEKEKLKNESDDE-EKDVKPMTSGLD 141

Query: 122 GDDRSVTYEELRQRLHRKIEEFRSNRNTGCSNREKKRNERNERRELVQKKRKKENGPEEK 181
            D+RSVTYEELRQRLHRK+EEFR+NRNTGCSNREKKRNERNER ELVQKKRK+E  PEEK
Sbjct: 142 DDERSVTYEELRQRLHRKLEEFRANRNTGCSNREKKRNERNERWELVQKKRKREVEPEEK 201

Query: 182 KSA--NYHSTDEVEKNVVEASKELAFSHVKLGTEEEHGKKKKRKLSKLEELERAKKLDEA 241
           KSA     ST EVE++VVEASK+LAFSHVKLGTEEE+GKKKKR+LSKL+ELE AK+L+EA
Sbjct: 202 KSATSTTRSTSEVERSVVEASKKLAFSHVKLGTEEENGKKKKRRLSKLKELENAKRLEEA 261

Query: 242 KKDPEKGETISKKHSWKAATSRAAGIKVHDDPKLLMKSLKKEKKQQLKNVEKWKERIETT 301
           KKDPEKGETISKKHSWKAATSRAAG KVHDDPKLLMKSL+KEKKQQLKNVEKWKERIETT
Sbjct: 262 KKDPEKGETISKKHSWKAATSRAAGDKVHDDPKLLMKSLRKEKKQQLKNVEKWKERIETT 321

Query: 302 QKMKAERQQKRSENISQKIHDKKMKRIAKREKKLMRPGFEGRKEGFINEG 350
           QKMKAERQQKRS+NI+ KIHDKKM+RIAKREKKLMRPGFEGRKEGFINEG
Sbjct: 322 QKMKAERQQKRSKNIAHKIHDKKMRRIAKREKKLMRPGFEGRKEGFINEG 370

[Close]

BLAST of MS001828.1 vs. ExPASy TrEMBL
Match: A0A5D3BF67 (Surfeit locus protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00410 PE=3 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 5.9e-144
Identity = 293/351 (83.48%), Postives = 321/351 (91.45%), Query Frame = 0


Query: 1   MKNKKLKTAATSNSSIDLKSIIHQHALFFDKLVELIPARFYLPNDEKEKPWFQGLSKTEK 60
           MK KK KTA+TSN+++DLKSIIHQHALF DKLVELIPARFYL NDEKEKPWFQGLSK EK
Sbjct: 1   MKVKKSKTASTSNTNVDLKSIIHQHALFIDKLVELIPARFYLSNDEKEKPWFQGLSKNEK 60

Query: 61  VLAKKESKENLKKARRDRMDPEKSSKSTLDLLKQSLEKSKLNDESDDDNEMDVKPMTSGM 120
            LAKKESKENLKK +RDRMDPEKS KST+ LLKQ+LEK+KL  E+  DN+ D KPMTSG+
Sbjct: 61  ALAKKESKENLKKVKRDRMDPEKSDKSTVHLLKQNLEKNKLRIET-GDNKKDDKPMTSGL 120

Query: 121 DGDDRSVTYEELRQRLHRKIEEFRSNRNTGCSNREKKRNERNERRELVQKKRKKENGPEE 180
           + DD+SVTYEELRQRLH+KIEEFR+NRNT CSNRE+KR ERNERREL+ KK+K+ENG EE
Sbjct: 121 E-DDQSVTYEELRQRLHQKIEEFRANRNTECSNRERKRKERNERRELIHKKQKRENGLEE 180

Query: 181 KKSANYHSTDEVEKNVVEASKELAFSHVKLGTEEEHGKKKKRKLSKLEELERAKKLDEAK 240
           KKS  Y S DEVEKNV EASKELAFSHVKLGTEEEHGKKKKRK SKLEELERAKKL+EAK
Sbjct: 181 KKSTGYPSKDEVEKNVAEASKELAFSHVKLGTEEEHGKKKKRKFSKLEELERAKKLEEAK 240

Query: 241 KDPEKGETISKKHSWKAATSRAAGIKVHDDPKLLMKSLKKEKKQQLKNVEKWKERIETTQ 300
           KDPEKGE ISKKHSWKAAT+RAAG+KVHDD KLLMKSLKKEKKQQLKNV+KWK+RIETTQ
Sbjct: 241 KDPEKGEIISKKHSWKAATNRAAGLKVHDDAKLLMKSLKKEKKQQLKNVQKWKDRIETTQ 300

Query: 301 KMKAERQQKRSENISQKIHDKKMKRIAKREKKLMRPGFEGRKEGFINEGAT 352
           KMKAERQQKRS+NI+QKI DKKM++IAKREKKLMRPGFEGRKEGFINEG T
Sbjct: 301 KMKAERQQKRSDNIAQKIQDKKMRKIAKREKKLMRPGFEGRKEGFINEGTT 349

[Close]

BLAST of MS001828.1 vs. TAIR 10
Match: AT5G05210.1 (Surfeit locus protein 6 )

HSP 1 Score: 307.8 bits (787), Expect = 1.2e-83
Identity = 206/375 (54.93%), Postives = 258/375 (68.80%), Query Frame = 0


Query: 14  SSIDLKSIIHQHALFFDKLVELIPARFYLPNDEKEKPWFQGLSKTEKVLAKKESKENLKK 73
           S +D K+  HQH  FFDKL+EL PARFYLP DE E+ W+ GLSK +K  AKK++ +NLKK
Sbjct: 18  SEMDFKT--HQHTEFFDKLIELTPARFYLP-DETERKWYPGLSKAQKARAKKKTNDNLKK 77

Query: 74  ARRDRMDPEKSSKSTLDLLKQSLEKSKLNDES-------------------------DDD 133
           A+RD++DPEKS+ +TLDLLK+ +EK +L  +                          DDD
Sbjct: 78  AKRDKLDPEKSALTTLDLLKEKIEKERLASQKQKLKKKHADLREQKLEQEKSGTELPDDD 137

Query: 134 ----------NEMDVKPMT-SGMDGDDRSVTYEELRQRLHRKIEEFRSNRNTGCSNREKK 193
                     N+ D K  T +    DDRSVTYEELR+RLHRKI+E +  R  G S+R + 
Sbjct: 138 SKKETDNNRLNDDDSKEETDNNRQKDDRSVTYEELRERLHRKIDELKGGR--GGSDRPRS 197

Query: 194 RNERNERRELVQKKRKKENGPEEKKSANYHSTD--EVEKNVVEASKELAFSHVKLGTEEE 253
            NER  R++ +  KRK++   EEK      S D  + + +V EA+K+L F +VK+  +EE
Sbjct: 198 -NER--RKKNLPNKRKRDTVSEEKTVEEIKSADKGKGKLDVEEAAKDLTFGYVKIDDDEE 257

Query: 254 HGK-KKKRKLSKLEELERAKKLDEAKKDPEKGETISKKHSWKAATSRAAGIKVHDDPKLL 313
           HGK KKKR+LSK  ELERA KL+ AKKDPEKG+ I+KKHSWKAATSRAAGIKVHDDPKLL
Sbjct: 258 HGKEKKKRRLSKARELERAMKLEAAKKDPEKGDVIAKKHSWKAATSRAAGIKVHDDPKLL 317

Query: 314 MKSLKKEKKQQLKNVEKWKERIETTQKMKAERQQKRSENISQKIHDKKMKRIAKREKKLM 350
            +S+ K+KK+Q KN EKWKERIE  QK K E+QQKRS NI+ +I   KM++IAKREKKL+
Sbjct: 318 KQSIHKDKKRQEKNAEKWKERIEGQQKFKVEKQQKRSGNIADRIEQNKMRKIAKREKKLL 377

[Close]

BLAST of MS001828.1 vs. TAIR 10
Match: AT5G05210.2 (Surfeit locus protein 6 )

HSP 1 Score: 307.8 bits (787), Expect = 1.2e-83
Identity = 206/375 (54.93%), Postives = 258/375 (68.80%), Query Frame = 0


Query: 14  SSIDLKSIIHQHALFFDKLVELIPARFYLPNDEKEKPWFQGLSKTEKVLAKKESKENLKK 73
           S +D K+  HQH  FFDKL+EL PARFYLP DE E+ W+ GLSK +K  AKK++ +NLKK
Sbjct: 10  SEMDFKT--HQHTEFFDKLIELTPARFYLP-DETERKWYPGLSKAQKARAKKKTNDNLKK 69

Query: 74  ARRDRMDPEKSSKSTLDLLKQSLEKSKLNDES-------------------------DDD 133
           A+RD++DPEKS+ +TLDLLK+ +EK +L  +                          DDD
Sbjct: 70  AKRDKLDPEKSALTTLDLLKEKIEKERLASQKQKLKKKHADLREQKLEQEKSGTELPDDD 129

Query: 134 ----------NEMDVKPMT-SGMDGDDRSVTYEELRQRLHRKIEEFRSNRNTGCSNREKK 193
                     N+ D K  T +    DDRSVTYEELR+RLHRKI+E +  R  G S+R + 
Sbjct: 130 SKKETDNNRLNDDDSKEETDNNRQKDDRSVTYEELRERLHRKIDELKGGR--GGSDRPRS 189

Query: 194 RNERNERRELVQKKRKKENGPEEKKSANYHSTD--EVEKNVVEASKELAFSHVKLGTEEE 253
            NER  R++ +  KRK++   EEK      S D  + + +V EA+K+L F +VK+  +EE
Sbjct: 190 -NER--RKKNLPNKRKRDTVSEEKTVEEIKSADKGKGKLDVEEAAKDLTFGYVKIDDDEE 249

Query: 254 HGK-KKKRKLSKLEELERAKKLDEAKKDPEKGETISKKHSWKAATSRAAGIKVHDDPKLL 313
           HGK KKKR+LSK  ELERA KL+ AKKDPEKG+ I+KKHSWKAATSRAAGIKVHDDPKLL
Sbjct: 250 HGKEKKKRRLSKARELERAMKLEAAKKDPEKGDVIAKKHSWKAATSRAAGIKVHDDPKLL 309

Query: 314 MKSLKKEKKQQLKNVEKWKERIETTQKMKAERQQKRSENISQKIHDKKMKRIAKREKKLM 350
            +S+ K+KK+Q KN EKWKERIE  QK K E+QQKRS NI+ +I   KM++IAKREKKL+
Sbjct: 310 KQSIHKDKKRQEKNAEKWKERIEGQQKFKVEKQQKRSGNIADRIEQNKMRKIAKREKKLL 369

[Close]

BLAST of MS001828.1 vs. TAIR 10
Match: AT2G27750.1 (Surfeit locus protein 6 )

HSP 1 Score: 129.8 bits (325), Expect = 4.3e-30
Identity = 90/190 (47.37%), Postives = 127/190 (66.84%), Query Frame = 0


Query: 152 SNREKKRNERNERRELVQKKRKKENGPEEKKSANYHSTDEVEKNVV-EASKELAFSHVKL 211
           S +E    E+  +  L + KRK+++G                 NV  E  K+L + ++K+
Sbjct: 8   SLQEDDTFEKMRQSRLQKNKRKRDSG----------------LNVFEEVVKDLTYGYMKI 67

Query: 212 GTEEE-HGK-KKKRKLSKLEELERAKKLDEAKKDPEKGETISKKHSWKAATSRAAGIKVH 271
           G  +E +GK +KK+++SK +ELE A  L+  KKD EKG+ ++K HSW+AA SRAAGIK+H
Sbjct: 68  GDGDEIYGKHRKKKRVSKAKELEMAMTLEALKKDQEKGDIVAKNHSWQAAISRAAGIKIH 127

Query: 272 DDPKLLMKSLKKEKKQQLKNVEKWKERIETTQKMKAERQQKRSENISQKIHDKKMKRIAK 331
           DDPK L K + KE K + KN EKWKER++  QK +AE+QQKRSEN+  +I  KKM++IAK
Sbjct: 128 DDPKRLKKRIHKETKMREKNTEKWKERVDVQQKFRAEKQQKRSENVIDRIQQKKMRKIAK 181

Query: 332 REKKLMRPGF 339
           REKKL+RPG+
Sbjct: 188 REKKLLRPGY 181

The following BLAST results are available for this feature:

BLAST of MS001828.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135417.1	1.6e-175	99.43	ribosomal RNA-processing protein 14-C-like [Momordica charantia]	[more]
KAG7021387.1	1.8e-155	89.94	hypothetical protein SDJN02_15112 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023531300.1	2.4e-155	89.34	surfeit locus protein 6-like [Cucurbita pepo subsp. pepo] >XP_023531301.1 surfei...	[more]
XP_022933507.1	5.2e-155	89.66	surfeit locus protein 6-like [Cucurbita moschata]	[more]
XP_023007532.1	2.6e-154	89.05	ribosomal RNA-processing protein 14-C-like [Cucurbita maxima] >XP_023007538.1 ri...	[more]

BLAST of MS001828.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS001828.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C2M6	7.6e-176	99.43	ribosomal RNA-processing protein 14-C-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1EZY5	2.5e-155	89.66	surfeit locus protein 6-like OS=Cucurbita moschata OX=3662 GN=LOC111440908 PE=3 ...	[more]
A0A6J1L7X8	1.3e-154	89.05	ribosomal RNA-processing protein 14-C-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1CA47	6.1e-149	87.14	ribosomal RNA-processing protein 14-C-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A5D3BF67	5.9e-144	83.48	Surfeit locus protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MS001828.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05210.1	1.2e-83	54.93	Surfeit locus protein 6	[more]
AT5G05210.2	1.2e-83	54.93	Surfeit locus protein 6	[more]
AT2G27750.1	4.3e-30	47.37	Surfeit locus protein 6	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 275..309
None	No IPR available	COILS	Coil	Coil	coord: 213..240
None	No IPR available	COILS	Coil	Coil	coord: 153..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 299..351
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..254
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 299..320
None	No IPR available	PANTHER	PTHR14369:SF1	BNAC02G02430D PROTEIN	coord: 13..349
IPR029190	Ribosomal RNA-processing protein 14/surfeit locus protein 6, C-terminal domain	PFAM	PF04935	SURF6	coord: 152..325 e-value: 4.5E-23 score: 82.1
IPR029188	Ribosomal RNA-processing protein 14, N-terminal	PFAM	PF15459	RRP14	coord: 22..82 e-value: 1.6E-20 score: 73.5
IPR007019	Surfeit locus 6	PANTHER	PTHR14369	SURFEIT LOCUS PROTEIN 6	coord: 13..349

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS001828	MS001828	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS001828.1-cds	MS001828.1-cds-scaffold30:268422..269474	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS001828.1	MS001828.1-protein	polypeptide