MS001256.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS001256.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	INVOLVED IN: chromosome segregation, cell division; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages;
Location	scaffold36: 2690607 .. 2696542 (+)
Sequence length	984
RNA-Seq Expression	MS001256.1
Synteny	MS001256.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGCGACATCGAAGAATCAATCAAGAAGAAGCCGAGAAAAAATCCACATCCTGGCGAATCTTCTCGCAAGGTACGTTTACTTACGGTCTCTGCGCAAATTTATTCTCTCATTCGATCAGGAGTCGATTCCAAATCTCCGTTTGTGTAAACGAGTTCAAGTGTACGAAGTAGAAATCGAAAGCTTAGGTTTCTGGATCGAATTTGGCGTTGCGAGAGTTTAATTCTTATAAATTCGGAGTTTACATGTTACGACAGTATAGACGGTAAATTATTCGAGACGTGATTCTGTAATCGTTTTTATGATCTGAAGGTTTCAAGTGTGGAATCATGCAGCGGTTTCCTAGGGAGCGACGATATTAAGTAATGTGGGAAAATTGAGTCATATTACTCTTCCTAGGAGTTAATTAGCCAAGTTTATCGGCTGATGCAACAATGTAATGAAAGTATTTAAGAGGTATATGCATTAAACCAGTCATGTTTAATGTGGCTAATGCGCTCAAGTCTATTTCCTCAAGAACAACCTATAGTTGAACTATCAAAAATATTCTAAGGTATCATGAAAGATCACCAATTGAAATGGACACAGTTAAATTAGTCAAAGTAACTATGCTTAATTTTTAGTGCTGTTTGTGGAGTTGTGGTTATTTGATCTGATAGTTGCAAATGTCATGCAGAATTTAAACATGGATACAATACATAAATCAATTAAAATGGACCTAAATATTACCGCTGAGAATTACCCTCCTGCTGTTGTAAATGTACATGAGATGCAGTTTTGCTTTTGCATGCCTCAGCATTTTCAGAAGTACCGTTTAAAACTCCATTTCTCCAGTTTCTAACTTCTTATTAAGGCATAAGAGATACTGTAACGTAATTGATTTTCTGGGTAATGAGAACAAGTGTGGCTATTTCTAGTGAATTAGCTATGAAAACATTAGAGATTTGGGGAAATTGATGAGAGGATACTAGTGCCATGCATCTTCCTTTTGTGAGTCTGACCAAGTAAGTTGGAACACGAGGTGTTCTATTGGAGATAATGAGTGCTGAACTTACATGGATGCAAATTAATCAAAGAAAATTTGGTGATGTAGTGTATTTAGGAGTTATTTTATAATTTTGATCTGAGTTGGTTTTTTATTAGTTTTTAGTTTTTAGGTTCAGAGGATTCCTGTAAGTTCCACTGATAGTAAGATACTAGAGTCCCTGTGGCAGAAGGCCGTACTTGCTCTCTGCAATCTTATGCCACTGAGAATTGGGTTATAAGAAGAAGCACTATAACCACTTGGAAAGGAGAGCAATACTTTTTATTGCCAACGACTCAGCTGCTCTAAGTTTGTTATTTTTCTTGGCTCTTGTTTTTTTTACTCTTTGTCAAGACTCATCATCTCAGATGCAACCTCTCATCGGTGTTATATAAGAGTTACTCAGCACTGGGACTGCTCACTCTGTTTTTCTTTTTTTTCTCATACATATATGTGTAAGCAAGACTCATGCATAACTTGAGATGCACATATCATGAAGGATTTGGCCAATATCTGTGTTGTTATCCATTCATCACTCATTGTTGTATGCTGCTAGTTGTATTGTATGATAAAAATGTTTGCCTTGTAAGTATTTAATATTATTTCTGGTGCATTATTCTTTTTATTTATGCCAGCTTTATATAGTTATCTTGTAATTCTTTATGGTTTTTAATTTTCTCTTTTGCAGCTAGCTTTGGGTTTTAATTCTTCCTTATAATGTTTGGTTCTGAGCTTTATTTATCTTCTCTGCACCCTTTCCTTTTTCAGCTGGGTACAATATGTTGTCTTGGGTTGAAATTTTTCTTTCAATGATTTGAATGTCCCTTTATCTGTGACAGAGTTTTATGCAAGAAGAAGATATTAGCTTGGAGACTACACGGGCAAGATGTACTTCATTTTTTTTTGTTCTTTTCACCTCGTTCAAAATTTCTTTTATGTTATTTTTCCTTTTTTCGTTAGTTAATGAAATTTCTGGTTTCTGGCTTCTTTGTTATTTTGCAGTTTCAAATGTCCTCAAAAGGCACAGTGAATTAACTGAGCGTCTCTCCAGGTAGGCCACCTTTGATGTAGTTATGTTTGACTAAGCTTAATTGTGTACACGATGGTTTTTTTTTTTCTTTTTCTAAATAATCATTTGAAAGTTCTCTTGCCATGGAGAGCTTGTAGATATCTTGTTATGTTGTGGTGTGTGTCCTTTTATTTTGTTATCAACTTATCATGAACAAATGGCAATGAACTATTTACTTTTGGGTGAGGGTTTCAAGTTATGTATTCTTTACAGAATATAAGGCGTAAGGTTTTTGGTTTTTGGCTTTTGTTTTTTTTTTTTCCTTTTTTTTAAAAATAATAATATTAACAATAGGGACTCTGACAAGATGATTTTTGAGCGCTTACAAAAAGAATTTGAAGCTGCTAGAGCATCTCAGACTCAAGGTAATTTGCAGTGAATTACATTCCCTGAGATCTATTTTACTCGTCTTTTCACTTGTTTGTGTGGCACAGTACCACATAATTATGAGATGACTCAATCCTTCCTCTTCTACCTTTTTTATTGGTTTTTATTTTTCCCCTCAAAATGTGCAGTATGGCCATTTTAATCACTTCTTCCTCATTTGCCTACTTAGGTAAGGTAGTTAAGATGCTTTCCCCCTTATTTTTTGTGGGTTTTGCAGAAATATGTTTGGATGGTGAGCAATGGAATGATGGGCTTTTAGCTACAATAAGAGAGCGGGTATGACAATGTTGCAAACTGTCAAATCATTCAATTTTATTTTGAGTTTCTTTTTTTATTTCACTATCATTTTAAAGAAACTTGTAAATTGAGACAAAGATGATCGATGACCAAAGGTAATTTATGCCATTTTGATCCCATTGTTTCATGCTTCCGATGACGAATGCTTATGGTAATGTCCTTCCTTTATCAGGTTCATATGGAGGCAGATAGAAAGGCCATGCCTGCAGAATCGGATATGTTGCCACTGGAAAAAATCACCTATAAAGTTGGAACCAAGGTATGTTTTGTATGGCTGCACATTTCGATGGTTCTTTGAAATTACAAGGTGAATACAGAGCGTGGGAATGGTTGATTGAAATGACTCTTAAGAATTTTTCTGGGCTAGTCTAGAGGGGGCAATAAGACGTGAGAGGCCATTAAATTTTGAGGACTCCCTTTGGAGTTTATTGTCCAAATTTTTTGTAGTTGGGGCTTTTTTTTTCCACAAATGCTAGCAGGATATAATCCTCGTGACTTTTGTGGGTTGATACCTTATCTCCTATTGTATCTTTACTCCTTTGAGATATTAATGAAGTATTTTTGCTTGCAAAATGATCGTGGACTATAGCATGCCTTTGAATGTATGGAGTAGATTATTTTCAGATAGTGTATTAAGAGTTGAAAACGAGCATGTTTTTTGTTGAACAGGTTATTTGCTGCTTGGAAGGAGCAAGGATTGGTATACAATATGAGACATCTTTTGCTGGTAATTTGATAATTTCACTCTATTTCTATAGTATTTGGATTGTGAAAAGGAAAACAATTCACTAATATGTATTGACTTCCACTCATGTAATGAGGTCTTAAATGAAAGAAAATTAATGTTGTATGAGCCTATGAGGAGGCTAAAACTTATGGGCATTCATTCATTGTGAAAGGTGCCGGCACGTTCATTTTGGAATCTGTAATAATTTTGATTAATCAGCAGTGCAGACCTTCGCTTCCTTAAATTGAATAAGTGGACTACCAAATATTATTAAAATCTATGGGTCACATCCATACATCAATTTTCTAGTGCAACGACATGACCTGGTATCTCCAACTGGAATAGGTTGGAAAAATGCTCATTTTAGTGCCTTGAATTCTGAGATTATTTGTCCAAATATTATTTCATTTTTCATGTTACTTAGAAACTTAAACTTTATGCTACTATAAATATTTTGGTTGATGGTTGATATTTTGCTTGAGCTTCTCTTAGTCAATGTAGCTTGGAAACTTGGAACTTTATGCCAGTGAGTACATTTATCATTTAGTGCTGGTATACAGGTTTGAATCGCATAGAACTCGTTTTGTTTCATTTTCTCTTGTTGCCGAGAAACCTGAATTTTATGCTATGGTAAATATTTAGGTAGAATCATTTAGTGCTCTTGACTTATATTTTGGTGCTCTTAATTTTTATTTTGCTGGTATGATCATTCATTAATTTATGTCTCTTGGAAGTGGAATGATCTGGTTGAATAATTTTCAGGTGAGCCTTGTGAACTTTACCATTGCGTGCTTGAGAGCAAGTCATTTCTTGAAAAAATGACCGTCCTAGAACATACAATTCCATTCTTTTTGCCAATACGAGAAGCAGAAAATGATCTTCTCTCCTCTAATGCGATGGTAGGTTTGGTTGCCTAAATTTTCATTGATGATCTCAGATTATTGCAAATAAATTGATTTTTCCACGTTTCCTTCAATTTTTCGATCTTGCAGAAGTTTATAGATCATATTGGAGAACTTTTGCAGGCCTATGTGGATAGAAGGGAACAGGTAAGAAATCAGTAAATGGTTATATTAAAAGGAAGACGTTAGTTCATCCCTCAGCTTGCGTGCTTCGATCATTCTGTCTGTTGTCTACACAGTACAGACCCCTGTGCTGTTAGACTTATGATGGCATTGTAGTAGAATTAATTCTTGCCTTTTGTTTTGCACGTGTTACGTCGATGGATGTTTGATTATGCATCCTGATGGTTGGCTAAGTAGTGTCATTTAGTATGAGAAGGCCAAATCTTCATAAAGTGATAATTATTGTTAGACAAATAAGACTTCTTCAGGATGATGTTTACCTCTTAACAAAAAAAAAAATGGTGGCACTACTTGGGTTGTTGGCTGATATGCTAAAATTCGCTAACTTATTTTGATGGTGGTTGTAGGAGAGAGTTTTATGTTGTCGTGCACAACCCTAAGCATACTCATACTTAACAGTGCTTAGCATAGTTATGGAAAAAATCTTGTATGGGACCCCCGGTGTGCGTGTTTTTTTCTTTATAAGAATCCTCCAAAAAATTTTTGATGTAATCCTCCTGTGTGTTTATGTGGTCGTATGGCTATTCCTTTTGGTTCATTATAGGTTGCATCTTCCTTTCTCGCTAAGTGAAGATTTACATGATGTGTTCATAAATAATTCAGGTTAGGCTTATCAAGGAGTTATATGGCAACCAGATCAGGGAGTTGTATCATAGCCTTCCATTCCATATGGTTGAATTTGTGCTAGATGATTTTGACTGGTCAGTTCACTAAACTCAGTTATATTCATCGTTGAACTCTTTTTATATTTTGCCATATACCTTAAGCTGTTTTTCTATGAGCGTTTTAAAGAAAATGTAGAAACTGGAATTCTGAATACATTTACTCTTTAATCCTAACGTAGTTCAGCATGAGAGTTGAGTCAGGTGGTCTACCTGAAAGCCCAAGATATTGATATTGACCCGTTTATTTTTTTCTGCCATCAATTCCAAGGCCTGTTACTAGAAATCAACAACCATATTTGTCATGATTCTTATCAAATTTAACCTTAACCTGTGTCTTCTTTCCAGCACGGTGACTGTCAGTCTGAGATATGCAGATCTTATCTATGTGCTGCCAACTAAAATCAGTGTGCTTGCATGGCCAATGCCTCAGTTTCAGAAAAATGGAGGAACTGGAAGTCATCCTATTCCAGCTCGCCTATCATATGCAGAGGATGCTTTACGAACCATGAGCTTACCAGAAGGTACGTTTTCCAATTCAAATTAGTTAGGCAGTTACCAAATCAAATTTTAGAACTGTAATGTTCTTTTCTTTTCCTGCTTCCCCATATCAGCATATGCAGAGATTGTGTTGAATTTGCCTAAGGCTATACAACAGATGTTTCCGCCGAAACCTCCCACT

mRNA sequence

ATGGAGAGCGACATCGAAGAATCAATCAAGAAGAAGCCGAGAAAAAATCCACATCCTGGCGAATCTTCTCGCAAGAGTTTTATGCAAGAAGAAGATATTAGCTTGGAGACTACACGGGCAAGATTTTCAAATGTCCTCAAAAGGCACAGTGAATTAACTGAGCGTCTCTCCAGGGACTCTGACAAGATGATTTTTGAGCGCTTACAAAAAGAATTTGAAGCTGCTAGAGCATCTCAGACTCAAGAAATATGTTTGGATGGTGAGCAATGGAATGATGGGCTTTTAGCTACAATAAGAGAGCGGGTTCATATGGAGGCAGATAGAAAGGCCATGCCTGCAGAATCGGATATGTTGCCACTGGAAAAAATCACCTATAAAGTTGGAACCAAGGTTATTTGCTGCTTGGAAGGAGCAAGGATTGGTATACAATATGAGACATCTTTTGCTGGTGAGCCTTGTGAACTTTACCATTGCGTGCTTGAGAGCAAGTCATTTCTTGAAAAAATGACCGTCCTAGAACATACAATTCCATTCTTTTTGCCAATACGAGAAGCAGAAAATGATCTTCTCTCCTCTAATGCGATGAAGTTTATAGATCATATTGGAGAACTTTTGCAGGCCTATGTGGATAGAAGGGAACAGGTTAGGCTTATCAAGGAGTTATATGGCAACCAGATCAGGGAGTTGTATCATAGCCTTCCATTCCATATGGTTGAATTTGTGCTAGATGATTTTGACTGCACGGTGACTGTCAGTCTGAGATATGCAGATCTTATCTATGTGCTGCCAACTAAAATCAGTGTGCTTGCATGGCCAATGCCTCAGTTTCAGAAAAATGGAGGAACTGGAAGTCATCCTATTCCAGCTCGCCTATCATATGCAGAGGATGCTTTACGAACCATGAGCTTACCAGAAGCATATGCAGAGATTGTGTTGAATTTGCCTAAGGCTATACAACAGATGTTTCCGCCGAAACCTCCCACT

Coding sequence (CDS)

ATGGAGAGCGACATCGAAGAATCAATCAAGAAGAAGCCGAGAAAAAATCCACATCCTGGCGAATCTTCTCGCAAGAGTTTTATGCAAGAAGAAGATATTAGCTTGGAGACTACACGGGCAAGATTTTCAAATGTCCTCAAAAGGCACAGTGAATTAACTGAGCGTCTCTCCAGGGACTCTGACAAGATGATTTTTGAGCGCTTACAAAAAGAATTTGAAGCTGCTAGAGCATCTCAGACTCAAGAAATATGTTTGGATGGTGAGCAATGGAATGATGGGCTTTTAGCTACAATAAGAGAGCGGGTTCATATGGAGGCAGATAGAAAGGCCATGCCTGCAGAATCGGATATGTTGCCACTGGAAAAAATCACCTATAAAGTTGGAACCAAGGTTATTTGCTGCTTGGAAGGAGCAAGGATTGGTATACAATATGAGACATCTTTTGCTGGTGAGCCTTGTGAACTTTACCATTGCGTGCTTGAGAGCAAGTCATTTCTTGAAAAAATGACCGTCCTAGAACATACAATTCCATTCTTTTTGCCAATACGAGAAGCAGAAAATGATCTTCTCTCCTCTAATGCGATGAAGTTTATAGATCATATTGGAGAACTTTTGCAGGCCTATGTGGATAGAAGGGAACAGGTTAGGCTTATCAAGGAGTTATATGGCAACCAGATCAGGGAGTTGTATCATAGCCTTCCATTCCATATGGTTGAATTTGTGCTAGATGATTTTGACTGCACGGTGACTGTCAGTCTGAGATATGCAGATCTTATCTATGTGCTGCCAACTAAAATCAGTGTGCTTGCATGGCCAATGCCTCAGTTTCAGAAAAATGGAGGAACTGGAAGTCATCCTATTCCAGCTCGCCTATCATATGCAGAGGATGCTTTACGAACCATGAGCTTACCAGAAGCATATGCAGAGATTGTGTTGAATTTGCCTAAGGCTATACAACAGATGTTTCCGCCGAAACCTCCCACT

Protein sequence

MESDIEESIKKKPRKNPHPGESSRKSFMQEEDISLETTRARFSNVLKRHSELTERLSRDSDKMIFERLQKEFEAARASQTQEICLDGEQWNDGLLATIRERVHMEADRKAMPAESDMLPLEKITYKVGTKVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFLPIREAENDLLSSNAMKFIDHIGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHMVEFVLDDFDCTVTVSLRYADLIYVLPTKISVLAWPMPQFQKNGGTGSHPIPARLSYAEDALRTMSLPEAYAEIVLNLPKAIQQMFPPKPPT

Homology

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BLAST of MS001256.1 vs. NCBI nr
Match: XP_022132081.1 (uncharacterized protein LOC111005041 [Momordica charantia])

HSP 1 Score: 652.5 bits (1682), Expect = 1.9e-183
Identity = 328/328 (100.00%), Postives = 328/328 (100.00%), Query Frame = 0


Query: 1   MESDIEESIKKKPRKNPHPGESSRKSFMQEEDISLETTRARFSNVLKRHSELTERLSRDS 60
           MESDIEESIKKKPRKNPHPGESSRKSFMQEEDISLETTRARFSNVLKRHSELTERLSRDS
Sbjct: 1   MESDIEESIKKKPRKNPHPGESSRKSFMQEEDISLETTRARFSNVLKRHSELTERLSRDS 60

Query: 61  DKMIFERLQKEFEAARASQTQEICLDGEQWNDGLLATIRERVHMEADRKAMPAESDMLPL 120
           DKMIFERLQKEFEAARASQTQEICLDGEQWNDGLLATIRERVHMEADRKAMPAESDMLPL
Sbjct: 61  DKMIFERLQKEFEAARASQTQEICLDGEQWNDGLLATIRERVHMEADRKAMPAESDMLPL 120

Query: 121 EKITYKVGTKVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL 180
           EKITYKVGTKVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL
Sbjct: 121 EKITYKVGTKVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL 180

Query: 181 PIREAENDLLSSNAMKFIDHIGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHMVEF 240
           PIREAENDLLSSNAMKFIDHIGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHMVEF
Sbjct: 181 PIREAENDLLSSNAMKFIDHIGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHMVEF 240

Query: 241 VLDDFDCTVTVSLRYADLIYVLPTKISVLAWPMPQFQKNGGTGSHPIPARLSYAEDALRT 300
           VLDDFDCTVTVSLRYADLIYVLPTKISVLAWPMPQFQKNGGTGSHPIPARLSYAEDALRT
Sbjct: 241 VLDDFDCTVTVSLRYADLIYVLPTKISVLAWPMPQFQKNGGTGSHPIPARLSYAEDALRT 300

Query: 301 MSLPEAYAEIVLNLPKAIQQMFPPKPPT 329
           MSLPEAYAEIVLNLPKAIQQMFPPKPPT
Sbjct: 301 MSLPEAYAEIVLNLPKAIQQMFPPKPPT 328

[Close]

BLAST of MS001256.1 vs. NCBI nr
Match: XP_008445088.1 (PREDICTED: uncharacterized protein LOC103488232 [Cucumis melo])

HSP 1 Score: 592.8 bits (1527), Expect = 1.8e-165
Identity = 300/339 (88.50%), Postives = 317/339 (93.51%), Query Frame = 0


Query: 1   MESDIEESIKKKPRKNPHPGESSRKSFMQEEDISLETTRARFSNVLKRHSELTERLSRDS 60
           MESDI+ESI+KK RKNPHPGESSRKS + +EDI +ETTRARFSNVLKRHSELTERLSRDS
Sbjct: 1   MESDIDESIRKKVRKNPHPGESSRKSGLLDEDIRMETTRARFSNVLKRHSELTERLSRDS 60

Query: 61  DKMIFERLQKEFEAARASQTQEICLDGEQWNDGLLATIRERVHMEADRKAMPAESDMLPL 120
           DKM+FERLQKEFEAARASQTQEI LDGEQWNDGLLATIRERVHMEA+RKAMP ++D+LPL
Sbjct: 61  DKMVFERLQKEFEAARASQTQEIYLDGEQWNDGLLATIRERVHMEAERKAMPEDADILPL 120

Query: 121 EKITYKVGTKVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL 180
           EKITYKVGTKVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL
Sbjct: 121 EKITYKVGTKVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL 180

Query: 181 PIREAENDLLSSNAMKFIDHIGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHMVEF 240
           P+REAENDLLSSNAMKFID+IGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHM+EF
Sbjct: 181 PVREAENDLLSSNAMKFIDYIGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHMIEF 240

Query: 241 VLDDFDCTVTVSLRYADLIYVLPTKISVLAWPMPQFQK-------------NGGTGSHPI 300
           V+DD DCTVTVSLRYADLIYVLPTKISVLAWPMPQ +K             NGGT SHPI
Sbjct: 241 VVDDSDCTVTVSLRYADLIYVLPTKISVLAWPMPQMKKNTANSSISSIKKENGGTVSHPI 300

Query: 301 PARLSYAEDALRTMSLPEAYAEIVLNLPKAIQQMFPPKP 327
           PARLSYAEDALRTMSLPEAYAEIVLNLP+AIQQ+FPPKP
Sbjct: 301 PARLSYAEDALRTMSLPEAYAEIVLNLPQAIQQLFPPKP 339

[Close]

BLAST of MS001256.1 vs. NCBI nr
Match: XP_004138767.1 (uncharacterized protein LOC101206507 [Cucumis sativus] >KGN62870.1 hypothetical protein Csa_022489 [Cucumis sativus])

HSP 1 Score: 590.1 bits (1520), Expect = 1.2e-164
Identity = 300/339 (88.50%), Postives = 315/339 (92.92%), Query Frame = 0


Query: 1   MESDIEESIKKKPRKNPHPGESSRKSFMQEEDISLETTRARFSNVLKRHSELTERLSRDS 60
           MESDIEESI+KK RKNPHPGESSRKS + +EDI +ETTRARFSNVLKRHSELTERLSRDS
Sbjct: 1   MESDIEESIRKKVRKNPHPGESSRKSGLLDEDIRMETTRARFSNVLKRHSELTERLSRDS 60

Query: 61  DKMIFERLQKEFEAARASQTQEICLDGEQWNDGLLATIRERVHMEADRKAMPAESDMLPL 120
           DKMIFERLQKEFEAARASQTQEI LDGEQWNDGLLATIRERVHMEA+RKAMP ++D+LP 
Sbjct: 61  DKMIFERLQKEFEAARASQTQEIYLDGEQWNDGLLATIRERVHMEAERKAMPEDADILPQ 120

Query: 121 EKITYKVGTKVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL 180
           EKITYKVGTKVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL
Sbjct: 121 EKITYKVGTKVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL 180

Query: 181 PIREAENDLLSSNAMKFIDHIGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHMVEF 240
           P+REAENDLLSSNAMKFID+IGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHM+EF
Sbjct: 181 PVREAENDLLSSNAMKFIDYIGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHMIEF 240

Query: 241 VLDDFDCTVTVSLRYADLIYVLPTKISVLAWPMPQFQK-------------NGGTGSHPI 300
           V+DD DCTVTVSLRYADLIYVLPTKISVLAWPMP  +K             NGGT SHPI
Sbjct: 241 VVDDSDCTVTVSLRYADLIYVLPTKISVLAWPMPHMKKNTTNSSILSIKKENGGTVSHPI 300

Query: 301 PARLSYAEDALRTMSLPEAYAEIVLNLPKAIQQMFPPKP 327
           PARLSYAEDALRTMSLPEAYAEIVLNLP+AIQQ+FPPKP
Sbjct: 301 PARLSYAEDALRTMSLPEAYAEIVLNLPQAIQQLFPPKP 339

[Close]

BLAST of MS001256.1 vs. NCBI nr
Match: XP_022997437.1 (uncharacterized protein LOC111492357 [Cucurbita maxima])

HSP 1 Score: 589.3 bits (1518), Expect = 2.0e-164
Identity = 302/341 (88.56%), Postives = 314/341 (92.08%), Query Frame = 0


Query: 1   MESDIEESIKKKPRKNPHPGESSRKSFMQEEDISLETTRARFSNVLKRHSELTERLSRDS 60
           MESDIEESIKKK R+NPHPGESSRKS +Q+EDI LETTRARFSNVLKRHSELTERLSRDS
Sbjct: 1   MESDIEESIKKKVRRNPHPGESSRKSGLQDEDIRLETTRARFSNVLKRHSELTERLSRDS 60

Query: 61  DKMIFERLQKEFEAARASQTQEICLDGEQWNDGLLATIRERVHMEADRKAMPAESDMLPL 120
           DKMIFERLQKEFEAARASQ QEI LDGEQWNDGLLATIRERVHMEA+RKAMP ++DMLPL
Sbjct: 61  DKMIFERLQKEFEAARASQNQEIYLDGEQWNDGLLATIRERVHMEAERKAMPEDADMLPL 120

Query: 121 EKITYKVGTKVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL 180
           EKITYKVG KVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL
Sbjct: 121 EKITYKVGNKVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL 180

Query: 181 PIREAENDLLSSNAMKFIDHIGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHMVEF 240
           P+RE+ENDLLSSNAMKFID+IGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHM+EF
Sbjct: 181 PVRESENDLLSSNAMKFIDYIGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHMIEF 240

Query: 241 VLDDFDCTVTVSLRYADLIYVLPTKISVLAWPMPQFQKN---------------GGTGSH 300
           VLDD DCTVTVSLRYADLI VLPTKISVLAWPMPQ +KN               GGT SH
Sbjct: 241 VLDDSDCTVTVSLRYADLISVLPTKISVLAWPMPQMKKNTANSSSTLSIKKENGGGTVSH 300

Query: 301 PIPARLSYAEDALRTMSLPEAYAEIVLNLPKAIQQMFPPKP 327
           PIPARLSYAEDALRTMSLPEAYAEIVLNLP+AIQQMF PKP
Sbjct: 301 PIPARLSYAEDALRTMSLPEAYAEIVLNLPQAIQQMFSPKP 341

[Close]

BLAST of MS001256.1 vs. NCBI nr
Match: XP_023546279.1 (uncharacterized protein LOC111805418 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 589.0 bits (1517), Expect = 2.6e-164
Identity = 302/342 (88.30%), Postives = 314/342 (91.81%), Query Frame = 0


Query: 1   MESDIEESIKKKPRKNPHPGESSRKSFMQEEDISLETTRARFSNVLKRHSELTERLSRDS 60
           MESDIEESIKKK R+NPH GESSRKS +Q+EDI LETTRARFSNVLKRHSELTERLSRDS
Sbjct: 1   MESDIEESIKKKVRRNPHAGESSRKSGLQDEDIRLETTRARFSNVLKRHSELTERLSRDS 60

Query: 61  DKMIFERLQKEFEAARASQTQEICLDGEQWNDGLLATIRERVHMEADRKAMPAESDMLPL 120
           DKMIFERLQKEFEAARASQ QEI LDGEQWNDGLLATIRERVHMEA+RKAMP ++DMLPL
Sbjct: 61  DKMIFERLQKEFEAARASQNQEIYLDGEQWNDGLLATIRERVHMEAERKAMPEDADMLPL 120

Query: 121 EKITYKVGTKVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL 180
           EKITYKVG KVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL
Sbjct: 121 EKITYKVGNKVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL 180

Query: 181 PIREAENDLLSSNAMKFIDHIGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHMVEF 240
           P+RE+ENDLLSSNAMKFID+IGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHM+EF
Sbjct: 181 PVRESENDLLSSNAMKFIDYIGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHMIEF 240

Query: 241 VLDDFDCTVTVSLRYADLIYVLPTKISVLAWPMPQFQKN----------------GGTGS 300
           VLDD DCTVTVSLRYADLI VLPTKISVLAWPMPQ +KN                GGT S
Sbjct: 241 VLDDSDCTVTVSLRYADLISVLPTKISVLAWPMPQMKKNTANSSSSTLSIKKENGGGTVS 300

Query: 301 HPIPARLSYAEDALRTMSLPEAYAEIVLNLPKAIQQMFPPKP 327
           HPIPARLSYAEDALRTMSLPEAYAEIVLNLP+AIQQMFPPKP
Sbjct: 301 HPIPARLSYAEDALRTMSLPEAYAEIVLNLPQAIQQMFPPKP 342

[Close]

BLAST of MS001256.1 vs. ExPASy TrEMBL
Match: A0A6J1BR87 (uncharacterized protein LOC111005041 OS=Momordica charantia OX=3673 GN=LOC111005041 PE=3 SV=1)

HSP 1 Score: 652.5 bits (1682), Expect = 9.3e-184
Identity = 328/328 (100.00%), Postives = 328/328 (100.00%), Query Frame = 0


Query: 1   MESDIEESIKKKPRKNPHPGESSRKSFMQEEDISLETTRARFSNVLKRHSELTERLSRDS 60
           MESDIEESIKKKPRKNPHPGESSRKSFMQEEDISLETTRARFSNVLKRHSELTERLSRDS
Sbjct: 1   MESDIEESIKKKPRKNPHPGESSRKSFMQEEDISLETTRARFSNVLKRHSELTERLSRDS 60

Query: 61  DKMIFERLQKEFEAARASQTQEICLDGEQWNDGLLATIRERVHMEADRKAMPAESDMLPL 120
           DKMIFERLQKEFEAARASQTQEICLDGEQWNDGLLATIRERVHMEADRKAMPAESDMLPL
Sbjct: 61  DKMIFERLQKEFEAARASQTQEICLDGEQWNDGLLATIRERVHMEADRKAMPAESDMLPL 120

Query: 121 EKITYKVGTKVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL 180
           EKITYKVGTKVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL
Sbjct: 121 EKITYKVGTKVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL 180

Query: 181 PIREAENDLLSSNAMKFIDHIGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHMVEF 240
           PIREAENDLLSSNAMKFIDHIGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHMVEF
Sbjct: 181 PIREAENDLLSSNAMKFIDHIGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHMVEF 240

Query: 241 VLDDFDCTVTVSLRYADLIYVLPTKISVLAWPMPQFQKNGGTGSHPIPARLSYAEDALRT 300
           VLDDFDCTVTVSLRYADLIYVLPTKISVLAWPMPQFQKNGGTGSHPIPARLSYAEDALRT
Sbjct: 241 VLDDFDCTVTVSLRYADLIYVLPTKISVLAWPMPQFQKNGGTGSHPIPARLSYAEDALRT 300

Query: 301 MSLPEAYAEIVLNLPKAIQQMFPPKPPT 329
           MSLPEAYAEIVLNLPKAIQQMFPPKPPT
Sbjct: 301 MSLPEAYAEIVLNLPKAIQQMFPPKPPT 328

[Close]

BLAST of MS001256.1 vs. ExPASy TrEMBL
Match: A0A1S3BBE0 (uncharacterized protein LOC103488232 OS=Cucumis melo OX=3656 GN=LOC103488232 PE=3 SV=1)

HSP 1 Score: 592.8 bits (1527), Expect = 8.7e-166
Identity = 300/339 (88.50%), Postives = 317/339 (93.51%), Query Frame = 0


Query: 1   MESDIEESIKKKPRKNPHPGESSRKSFMQEEDISLETTRARFSNVLKRHSELTERLSRDS 60
           MESDI+ESI+KK RKNPHPGESSRKS + +EDI +ETTRARFSNVLKRHSELTERLSRDS
Sbjct: 1   MESDIDESIRKKVRKNPHPGESSRKSGLLDEDIRMETTRARFSNVLKRHSELTERLSRDS 60

Query: 61  DKMIFERLQKEFEAARASQTQEICLDGEQWNDGLLATIRERVHMEADRKAMPAESDMLPL 120
           DKM+FERLQKEFEAARASQTQEI LDGEQWNDGLLATIRERVHMEA+RKAMP ++D+LPL
Sbjct: 61  DKMVFERLQKEFEAARASQTQEIYLDGEQWNDGLLATIRERVHMEAERKAMPEDADILPL 120

Query: 121 EKITYKVGTKVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL 180
           EKITYKVGTKVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL
Sbjct: 121 EKITYKVGTKVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL 180

Query: 181 PIREAENDLLSSNAMKFIDHIGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHMVEF 240
           P+REAENDLLSSNAMKFID+IGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHM+EF
Sbjct: 181 PVREAENDLLSSNAMKFIDYIGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHMIEF 240

Query: 241 VLDDFDCTVTVSLRYADLIYVLPTKISVLAWPMPQFQK-------------NGGTGSHPI 300
           V+DD DCTVTVSLRYADLIYVLPTKISVLAWPMPQ +K             NGGT SHPI
Sbjct: 241 VVDDSDCTVTVSLRYADLIYVLPTKISVLAWPMPQMKKNTANSSISSIKKENGGTVSHPI 300

Query: 301 PARLSYAEDALRTMSLPEAYAEIVLNLPKAIQQMFPPKP 327
           PARLSYAEDALRTMSLPEAYAEIVLNLP+AIQQ+FPPKP
Sbjct: 301 PARLSYAEDALRTMSLPEAYAEIVLNLPQAIQQLFPPKP 339

[Close]

BLAST of MS001256.1 vs. ExPASy TrEMBL
Match: A0A0A0LLQ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G378520 PE=3 SV=1)

HSP 1 Score: 590.1 bits (1520), Expect = 5.6e-165
Identity = 300/339 (88.50%), Postives = 315/339 (92.92%), Query Frame = 0


Query: 1   MESDIEESIKKKPRKNPHPGESSRKSFMQEEDISLETTRARFSNVLKRHSELTERLSRDS 60
           MESDIEESI+KK RKNPHPGESSRKS + +EDI +ETTRARFSNVLKRHSELTERLSRDS
Sbjct: 1   MESDIEESIRKKVRKNPHPGESSRKSGLLDEDIRMETTRARFSNVLKRHSELTERLSRDS 60

Query: 61  DKMIFERLQKEFEAARASQTQEICLDGEQWNDGLLATIRERVHMEADRKAMPAESDMLPL 120
           DKMIFERLQKEFEAARASQTQEI LDGEQWNDGLLATIRERVHMEA+RKAMP ++D+LP 
Sbjct: 61  DKMIFERLQKEFEAARASQTQEIYLDGEQWNDGLLATIRERVHMEAERKAMPEDADILPQ 120

Query: 121 EKITYKVGTKVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL 180
           EKITYKVGTKVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL
Sbjct: 121 EKITYKVGTKVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL 180

Query: 181 PIREAENDLLSSNAMKFIDHIGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHMVEF 240
           P+REAENDLLSSNAMKFID+IGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHM+EF
Sbjct: 181 PVREAENDLLSSNAMKFIDYIGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHMIEF 240

Query: 241 VLDDFDCTVTVSLRYADLIYVLPTKISVLAWPMPQFQK-------------NGGTGSHPI 300
           V+DD DCTVTVSLRYADLIYVLPTKISVLAWPMP  +K             NGGT SHPI
Sbjct: 241 VVDDSDCTVTVSLRYADLIYVLPTKISVLAWPMPHMKKNTTNSSILSIKKENGGTVSHPI 300

Query: 301 PARLSYAEDALRTMSLPEAYAEIVLNLPKAIQQMFPPKP 327
           PARLSYAEDALRTMSLPEAYAEIVLNLP+AIQQ+FPPKP
Sbjct: 301 PARLSYAEDALRTMSLPEAYAEIVLNLPQAIQQLFPPKP 339

[Close]

BLAST of MS001256.1 vs. ExPASy TrEMBL
Match: A0A6J1K513 (uncharacterized protein LOC111492357 OS=Cucurbita maxima OX=3661 GN=LOC111492357 PE=3 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 9.6e-165
Identity = 302/341 (88.56%), Postives = 314/341 (92.08%), Query Frame = 0


Query: 1   MESDIEESIKKKPRKNPHPGESSRKSFMQEEDISLETTRARFSNVLKRHSELTERLSRDS 60
           MESDIEESIKKK R+NPHPGESSRKS +Q+EDI LETTRARFSNVLKRHSELTERLSRDS
Sbjct: 1   MESDIEESIKKKVRRNPHPGESSRKSGLQDEDIRLETTRARFSNVLKRHSELTERLSRDS 60

Query: 61  DKMIFERLQKEFEAARASQTQEICLDGEQWNDGLLATIRERVHMEADRKAMPAESDMLPL 120
           DKMIFERLQKEFEAARASQ QEI LDGEQWNDGLLATIRERVHMEA+RKAMP ++DMLPL
Sbjct: 61  DKMIFERLQKEFEAARASQNQEIYLDGEQWNDGLLATIRERVHMEAERKAMPEDADMLPL 120

Query: 121 EKITYKVGTKVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL 180
           EKITYKVG KVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL
Sbjct: 121 EKITYKVGNKVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL 180

Query: 181 PIREAENDLLSSNAMKFIDHIGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHMVEF 240
           P+RE+ENDLLSSNAMKFID+IGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHM+EF
Sbjct: 181 PVRESENDLLSSNAMKFIDYIGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHMIEF 240

Query: 241 VLDDFDCTVTVSLRYADLIYVLPTKISVLAWPMPQFQKN---------------GGTGSH 300
           VLDD DCTVTVSLRYADLI VLPTKISVLAWPMPQ +KN               GGT SH
Sbjct: 241 VLDDSDCTVTVSLRYADLISVLPTKISVLAWPMPQMKKNTANSSSTLSIKKENGGGTVSH 300

Query: 301 PIPARLSYAEDALRTMSLPEAYAEIVLNLPKAIQQMFPPKP 327
           PIPARLSYAEDALRTMSLPEAYAEIVLNLP+AIQQMF PKP
Sbjct: 301 PIPARLSYAEDALRTMSLPEAYAEIVLNLPQAIQQMFSPKP 341

[Close]

BLAST of MS001256.1 vs. ExPASy TrEMBL
Match: A0A6J1HHI2 (uncharacterized protein LOC111462989 OS=Cucurbita moschata OX=3662 GN=LOC111462989 PE=3 SV=1)

HSP 1 Score: 586.3 bits (1510), Expect = 8.1e-164
Identity = 301/342 (88.01%), Postives = 312/342 (91.23%), Query Frame = 0


Query: 1   MESDIEESIKKKPRKNPHPGESSRKSFMQEEDISLETTRARFSNVLKRHSELTERLSRDS 60
           MESDIEESIKKK R+NPH GESSRKS  Q+EDI LETTRARFSNVLKRHSELTERLSRDS
Sbjct: 1   MESDIEESIKKKVRRNPHAGESSRKSGQQDEDIRLETTRARFSNVLKRHSELTERLSRDS 60

Query: 61  DKMIFERLQKEFEAARASQTQEICLDGEQWNDGLLATIRERVHMEADRKAMPAESDMLPL 120
           DKMIFERLQKEFEAARASQ QE  LDGEQWNDGLLATIRERVHMEA+RKAMP ++DMLPL
Sbjct: 61  DKMIFERLQKEFEAARASQNQETYLDGEQWNDGLLATIRERVHMEAERKAMPEDADMLPL 120

Query: 121 EKITYKVGTKVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL 180
           EKITYKVG KVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL
Sbjct: 121 EKITYKVGNKVICCLEGARIGIQYETSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFL 180

Query: 181 PIREAENDLLSSNAMKFIDHIGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHMVEF 240
           P+RE+ENDLLSSNAMKFID+IGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHM+EF
Sbjct: 181 PVRESENDLLSSNAMKFIDYIGELLQAYVDRREQVRLIKELYGNQIRELYHSLPFHMIEF 240

Query: 241 VLDDFDCTVTVSLRYADLIYVLPTKISVLAWPMPQFQKN----------------GGTGS 300
           VLDD DCTVTVSLRYADLI VLPTKISVLAWPMPQ +KN                GGT S
Sbjct: 241 VLDDSDCTVTVSLRYADLISVLPTKISVLAWPMPQMKKNTANSSSSTLSIKKENGGGTVS 300

Query: 301 HPIPARLSYAEDALRTMSLPEAYAEIVLNLPKAIQQMFPPKP 327
           HPIPARLSYAEDALRTMSLPEAYAEIVLNLP+AIQQMFPPKP
Sbjct: 301 HPIPARLSYAEDALRTMSLPEAYAEIVLNLPQAIQQMFPPKP 342

[Close]

BLAST of MS001256.1 vs. TAIR 10
Match: AT5G10710.2 (INVOLVED IN: chromosome segregation, cell division; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Centromere protein Cenp-O (InterPro:IPR018464); Has 43 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 402.5 bits (1033), Expect = 3.2e-112
Identity = 201/303 (66.34%), Postives = 241/303 (79.54%), Query Frame = 0


Query: 30  EEDISLETTRARFSNVLKRHSELTERLSRDSDKMIFERLQKEFEAARASQTQEICLDGEQ 89
           ++DI L+TTRAR SN+LKRH EL++RL+RDSDK + +RL KEFEAAR SQ+QE+ LDGE+
Sbjct: 9   DQDIRLDTTRARLSNLLKRHRELSDRLTRDSDKTMLDRLNKEFEAARRSQSQEVFLDGEE 68

Query: 90  WNDGLLATIRERVHMEADRKAMPAESDML----PLEKITYKVGTKVICCLEGARIGIQYE 149
           WNDGLLAT+RERVHMEADRKA    +       P E+ITY+VG KVICCL+G+RIGIQ+E
Sbjct: 69  WNDGLLATLRERVHMEADRKADNGNAGFSLVCHPEERITYRVGNKVICCLDGSRIGIQFE 128

Query: 150 TSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFLPIREAENDLLSSNAMKFIDHIGELL 209
           TS AGE  E+YHCVLESKSFLEKM VLEHTIPFFLP+ + ENDLL SNA KFID++G+LL
Sbjct: 129 TSTAGETYEVYHCVLESKSFLEKMIVLEHTIPFFLPLSDLENDLLFSNAKKFIDNVGDLL 188

Query: 210 QAYVDRREQVRLIKELYGNQIRELYHSLPFHMVEFVLDDFDCTVTVSLRYADLIYVLPTK 269
           QAYVDR+EQVRLIKEL+G+QI E+YHSLP+HM+EF +DD DC   VSLRY DL+  LPTK
Sbjct: 189 QAYVDRKEQVRLIKELFGHQISEIYHSLPYHMIEFSMDDCDCKFVVSLRYGDLLCELPTK 248

Query: 270 ISVLAWPMPQFQKNGGT--GSHPIPARLSYAEDALRTMSLPEAYAEIVLNLPKAIQQMFP 327
           + +L WPM    K   T  GS  IP RL +AEDA R  SLPEAYAEI+ N+P  I+Q+F 
Sbjct: 249 VRILVWPMHHLSKKQCTSPGSPAIPVRLPFAEDAFRIQSLPEAYAEIMPNMPNEIRQLFQ 308

[Close]

BLAST of MS001256.1 vs. TAIR 10
Match: AT5G10710.1 (INVOLVED IN: chromosome segregation, cell division; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Centromere protein Cenp-O (InterPro:IPR018464); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 402.5 bits (1033), Expect = 3.2e-112
Identity = 201/303 (66.34%), Postives = 241/303 (79.54%), Query Frame = 0


Query: 30  EEDISLETTRARFSNVLKRHSELTERLSRDSDKMIFERLQKEFEAARASQTQEICLDGEQ 89
           ++DI L+TTRAR SN+LKRH EL++RL+RDSDK + +RL KEFEAAR SQ+QE+ LDGE+
Sbjct: 9   DQDIRLDTTRARLSNLLKRHRELSDRLTRDSDKTMLDRLNKEFEAARRSQSQEVFLDGEE 68

Query: 90  WNDGLLATIRERVHMEADRKAMPAESDML----PLEKITYKVGTKVICCLEGARIGIQYE 149
           WNDGLLAT+RERVHMEADRKA    +       P E+ITY+VG KVICCL+G+RIGIQ+E
Sbjct: 69  WNDGLLATLRERVHMEADRKADNGNAGFSLVCHPEERITYRVGNKVICCLDGSRIGIQFE 128

Query: 150 TSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFLPIREAENDLLSSNAMKFIDHIGELL 209
           TS AGE  E+YHCVLESKSFLEKM VLEHTIPFFLP+ + ENDLL SNA KFID++G+LL
Sbjct: 129 TSTAGETYEVYHCVLESKSFLEKMIVLEHTIPFFLPLSDLENDLLFSNAKKFIDNVGDLL 188

Query: 210 QAYVDRREQVRLIKELYGNQIRELYHSLPFHMVEFVLDDFDCTVTVSLRYADLIYVLPTK 269
           QAYVDR+EQVRLIKEL+G+QI E+YHSLP+HM+EF +DD DC   VSLRY DL+  LPTK
Sbjct: 189 QAYVDRKEQVRLIKELFGHQISEIYHSLPYHMIEFSMDDCDCKFVVSLRYGDLLCELPTK 248

Query: 270 ISVLAWPMPQFQKNGGT--GSHPIPARLSYAEDALRTMSLPEAYAEIVLNLPKAIQQMFP 327
           + +L WPM    K   T  GS  IP RL +AEDA R  SLPEAYAEI+ N+P  I+Q+F 
Sbjct: 249 VRILVWPMHHLSKKQCTSPGSPAIPVRLPFAEDAFRIQSLPEAYAEIMPNMPNEIRQLFQ 308

[Close]

BLAST of MS001256.1 vs. TAIR 10
Match: AT5G10710.3 (INVOLVED IN: chromosome segregation, cell division; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Centromere protein Cenp-O (InterPro:IPR018464). )

HSP 1 Score: 359.4 bits (921), Expect = 3.1e-99
Identity = 186/303 (61.39%), Postives = 225/303 (74.26%), Query Frame = 0


Query: 30  EEDISLETTRARFSNVLKRHSELTERLSRDSDKMIFERLQKEFEAARASQTQEICLDGEQ 89
           ++DI L+TTRAR SN+LKRH EL++RL+RDSDK + +RL KEFEAAR SQ+QE+      
Sbjct: 9   DQDIRLDTTRARLSNLLKRHRELSDRLTRDSDKTMLDRLNKEFEAARRSQSQEV------ 68

Query: 90  WNDGLLATIRERVHMEADRKAMPAESDML----PLEKITYKVGTKVICCLEGARIGIQYE 149
                    +  VHMEADRKA    +       P E+ITY+VG KVICCL+G+RIGIQ+E
Sbjct: 69  --------FQALVHMEADRKADNGNAGFSLVCHPEERITYRVGNKVICCLDGSRIGIQFE 128

Query: 150 TSFAGEPCELYHCVLESKSFLEKMTVLEHTIPFFLPIREAENDLLSSNAMKFIDHIGELL 209
           TS AGE  E+YHCVLESKSFLEKM VLEHTIPFFLP+ + ENDLL SNA KFID++G+LL
Sbjct: 129 TSTAGETYEVYHCVLESKSFLEKMIVLEHTIPFFLPLSDLENDLLFSNAKKFIDNVGDLL 188

Query: 210 QAYVDRREQVRLIKELYGNQIRELYHSLPFHMVEFVLDDFDCTVTVSLRYADLIYVLPTK 269
           QAYVDR+EQVRLIKEL+G+QI E+YHSLP+HM+EF +DD DC   VSLRY DL+  LPTK
Sbjct: 189 QAYVDRKEQVRLIKELFGHQISEIYHSLPYHMIEFSMDDCDCKFVVSLRYGDLLCELPTK 248

Query: 270 ISVLAWPMPQFQKNGGT--GSHPIPARLSYAEDALRTMSLPEAYAEIVLNLPKAIQQMFP 327
           + +L WPM    K   T  GS  IP RL +AEDA R  SLPEAYAEI+ N+P  I+Q+F 
Sbjct: 249 VRILVWPMHHLSKKQCTSPGSPAIPVRLPFAEDAFRIQSLPEAYAEIMPNMPNEIRQLFQ 297

The following BLAST results are available for this feature:

BLAST of MS001256.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132081.1	1.9e-183	100.00	uncharacterized protein LOC111005041 [Momordica charantia]	[more]
XP_008445088.1	1.8e-165	88.50	PREDICTED: uncharacterized protein LOC103488232 [Cucumis melo]	[more]
XP_004138767.1	1.2e-164	88.50	uncharacterized protein LOC101206507 [Cucumis sativus] >KGN62870.1 hypothetical ...	[more]
XP_022997437.1	2.0e-164	88.56	uncharacterized protein LOC111492357 [Cucurbita maxima]	[more]
XP_023546279.1	2.6e-164	88.30	uncharacterized protein LOC111805418 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS001256.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS001256.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BR87	9.3e-184	100.00	uncharacterized protein LOC111005041 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A1S3BBE0	8.7e-166	88.50	uncharacterized protein LOC103488232 OS=Cucumis melo OX=3656 GN=LOC103488232 PE=...	[more]
A0A0A0LLQ7	5.6e-165	88.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G378520 PE=3 SV=1	[more]
A0A6J1K513	9.6e-165	88.56	uncharacterized protein LOC111492357 OS=Cucurbita maxima OX=3661 GN=LOC111492357...	[more]
A0A6J1HHI2	8.1e-164	88.01	uncharacterized protein LOC111462989 OS=Cucurbita moschata OX=3662 GN=LOC1114629...	[more]

BLAST of MS001256.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10710.2	3.2e-112	66.34	INVOLVED IN: chromosome segregation, cell division; LOCATED IN: chromosome, cent...	[more]
AT5G10710.1	3.2e-112	66.34	INVOLVED IN: chromosome segregation, cell division; LOCATED IN: chromosome, cent...	[more]
AT5G10710.3	3.1e-99	61.39	INVOLVED IN: chromosome segregation, cell division; LOCATED IN: chromosome, cent...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018464	Centromere protein O	PFAM	PF09496	CENP-O	coord: 136..320 e-value: 4.8E-27 score: 95.3
IPR018464	Centromere protein O	PANTHER	PTHR14582	INNER KINETOCHORE SUBUNIT MAL2	coord: 26..322
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS001256	MS001256	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS001256.1-cds	MS001256.1-cds-scaffold36:2690607..2690681	CDS
MS001256.1-cds	MS001256.1-cds-scaffold36:2692473..2692521	CDS
MS001256.1-cds	MS001256.1-cds-scaffold36:2692636..2692684	CDS
MS001256.1-cds	MS001256.1-cds-scaffold36:2692997..2693067	CDS
MS001256.1-cds	MS001256.1-cds-scaffold36:2693307..2693365	CDS
MS001256.1-cds	MS001256.1-cds-scaffold36:2693559..2693645	CDS
MS001256.1-cds	MS001256.1-cds-scaffold36:2694056..2694113	CDS
MS001256.1-cds	MS001256.1-cds-scaffold36:2694876..2695012	CDS
MS001256.1-cds	MS001256.1-cds-scaffold36:2695106..2695162	CDS
MS001256.1-cds	MS001256.1-cds-scaffold36:2695802..2695899	CDS
MS001256.1-cds	MS001256.1-cds-scaffold36:2696209..2696384	CDS
MS001256.1-cds	MS001256.1-cds-scaffold36:2696475..2696542	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS001256.1	MS001256.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034508	centromere complex assembly
cellular_component	GO:0000776	kinetochore