MS001026.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS001026.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	J domain-containing protein
Location	scaffold36: 929105 .. 930415 (-)
Sequence length	435
RNA-Seq Expression	MS001026.1
Synteny	MS001026.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GATATGGCCTCTGCTTCTCAGGTTGATTCTGATACAAATTTTGATGTAGAAAATGAAATGAAGTTGCAATCTGAAGTGGTAGTTTGTTCTGGTCCTGAAAATGCAGGAGATTTCTGTTGTTTGCTGCCTGAATTAGAGAGAAATTCATCTGAAAATATTCCTCTTCCATCCCAAGCTGTGAGGGATAGGATTTGAAAGAGAGAGGTTGAAAGAGACTGATGAGTATAGGCGAGCAATGGAAGAAGAATGGAGAACTAGGAAACAACAGTTACAAATTCAGGTCTTTTCATGCGTTATTGATCCTCTTATTACAATGCAATCACATGCATCTTATAAACCACAGAAAATCTAGAATTCTAGGGCTCTGTGTTGCACATTTTGATGCAGTAATTTTGATTTGAGATTGTTTGTTTGTTTGTTAGTCTCCTGCATGTTATGAAGATTTTTTTAATGATAATAAAGAATTGTGGTTGAGAATCCTTGGACTTTATACTCTTTATTCCCTTTGCTTCTTAACATCTTGTGATGCCCACCAACTTCTGCATTTGGCATTGAATTAATTGTAATAAGTTGAATCAGGTTGAGACCAGTATGTTTGTCTGCCATTCTAAGGCCCTCTTTGGAAGTTGAGTTTAATCTTTTCGTGAAAATGTGTTTGGATAACTATTTGTTAAAACTTATTTATCCTTGTTTTGTTCTATAGATGGGTTTTTTTAAGAGTATAGTGCCTCTAAACTTCACCCACCACTATTTTACAGGCTGAAGAAGCACGAAAATTGCGCAGAAAAAGAAAAGCGGATAGAATGCAGCTATTAGACATGCATACAAGGCAAATGAAACGATTGGAAGAAGTGAGAGAGACACGAAAGAAGGTATTTTTGTATACTTGTTATGCATTATTCAGCCTTATATTTTTTTATTGATATTCGTTGGTATAACACTGCATGACCTTACTATATTTAGTTACCAAAGGAATTCATAGAATATTAAATCCTAGATAGGTGACCAACAAGTATAACTGCATGACCTTACTACAAAGTAATTCAGGGTTGTTCTTCCGTCTTTTATAGATCCTGGCTAGACTTTTACCATCTTGCAGAGTTGACTGTTGGGTAAAAATCTTCCAGTTCTCATAGAACATTTTGCCTATTTCAGGATGAGGAAAATATAAACTTGAAGGAACAATTTCGTGTTGATGTAAGAAAAGAGCTTAGAAAGGTGGAAATGAAGTGCACTGATATGGCCTCCTTGTTACGTGGCCTGGGCATTCAAGTTGGAACTGGCTTACATCCTTCCTCACAAGAGGTAAAA

mRNA sequence

GATATGGCCTCTGCTTCTCAGGTTGATTCTGATACAAATTTTGATGTAGAAAATGAAATGAAGTTGCAATCTGAAGTGGTAGTTTGTTCTGGTCCTGAAAATGCAGGAGATTTCTGTTGTTTGCTGCCTGAATTAGAGAGAAATTCATCTGAAAATATTCCTCTTCCATCCCAAGCTGTGAGGGATAGGATTGAAAGAGAGAGGTTGAAAGAGACTGATGAGTATAGGCGAGCAATGGAAGAAGAATGGAGAACTAGGAAACAACAGTTACAAATTCAGGATGAGGAAAATATAAACTTGAAGGAACAATTTCGTGTTGATGTAAGAAAAGAGCTTAGAAAGGTGGAAATGAAGTGCACTGATATGGCCTCCTTGTTACGTGGCCTGGGCATTCAAGTTGGAACTGGCTTACATCCTTCCTCACAAGAGGTAAAA

Coding sequence (CDS)

GATATGGCCTCTGCTTCTCAGGTTGATTCTGATACAAATTTTGATGTAGAAAATGAAATGAAGTTGCAATCTGAAGTGGTAGTTTGTTCTGGTCCTGAAAATGCAGGAGATTTCTGTTGTTTGCTGCCTGAATTAGAGAGAAATTCATCTGAAAATATTCCTCTTCCATCCCAAGCTGTGAGGGATAGGATTGAAAGAGAGAGGTTGAAAGAGACTGATGAGTATAGGCGAGCAATGGAAGAAGAATGGAGAACTAGGAAACAACAGTTACAAATTCAGGATGAGGAAAATATAAACTTGAAGGAACAATTTCGTGTTGATGTAAGAAAAGAGCTTAGAAAGGTGGAAATGAAGTGCACTGATATGGCCTCCTTGTTACGTGGCCTGGGCATTCAAGTTGGAACTGGCTTACATCCTTCCTCACAAGAGGTAAAA

Protein sequence

DMASASQVDSDTNFDVENEMKLQSEVVVCSGPENAGDFCCLLPELERNSSENIPLPSQAVRDRIERERLKETDEYRRAMEEEWRTRKQQLQIQDEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQEVK

Homology

[Close]

BLAST of MS001026.1 vs. NCBI nr
Match: XP_022131619.1 (uncharacterized protein LOC111004748 [Momordica charantia])

HSP 1 Score: 186.4 bits (472), Expect = 1.7e-43
Identity = 111/176 (63.07%), Postives = 114/176 (64.77%), Query Frame = 0


Query: 8   VDSDTNFDVENEMKLQSEVVVCSGPENAGDFCCLLPELERNSSENIPLPSQAVRDRIERE 67
           VDSDTNFDVENEMKLQSEVVVCSGPENAGDFC +                       ERE
Sbjct: 392 VDSDTNFDVENEMKLQSEVVVCSGPENAGDFCWI---------------------GFERE 451

Query: 68  RLKETDEYRRAMEEEWRTRKQQLQIQ---------------------------------- 127
           RLKETDEYRRAMEEEWRTRKQQLQIQ                                  
Sbjct: 452 RLKETDEYRRAMEEEWRTRKQQLQIQAEEARKLRRKRKADRMQLLDMHTRQMKRLEEVRE 511

Query: 128 ----DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQEVK 146
               DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQE++
Sbjct: 512 TRKKDEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQEIQ 546

[Close]

BLAST of MS001026.1 vs. NCBI nr
Match: XP_023546909.1 (uncharacterized protein LOC111805871 [Cucurbita pepo subsp. pepo] >XP_023546910.1 uncharacterized protein LOC111805871 [Cucurbita pepo subsp. pepo] >XP_023546911.1 uncharacterized protein LOC111805871 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 169.1 bits (427), Expect = 2.8e-38
Identity = 108/186 (58.06%), Postives = 122/186 (65.59%), Query Frame = 0


Query: 1   DMASAS-QVDSDTNFDVENEMKLQSEVVVCSGPENA-GDFCCLLPELERNSSENIPLPSQ 60
           D ASAS +VDSDTNFDVEN+MK +S+V  CS  +NA    CCLL   + NS+EN  L   
Sbjct: 164 DKASASHRVDSDTNFDVENQMKQKSDVQACSSSKNAENGGCCLLTGPKSNSAENGSLTPF 223

Query: 61  AVRDRI-ERERLKETDEYRRAMEEEWRTRKQQLQIQ------------------------ 120
           AV+D I ERERLKETDEYRRAMEEEW TR+Q+LQIQ                        
Sbjct: 224 AVKDLICERERLKETDEYRRAMEEEWTTRQQELQIQAEEAQRLRRKRKADRMRLLDMQKR 283

Query: 121 --------------DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHP 146
                         DEENINLKEQ RV+VRKEL K+EM CTDMASLLRGLGIQVG+GLHP
Sbjct: 284 QMKRLEEVRETQKKDEENINLKEQLRVNVRKELSKLEMNCTDMASLLRGLGIQVGSGLHP 343

[Close]

BLAST of MS001026.1 vs. NCBI nr
Match: XP_038886123.1 (uncharacterized protein LOC120076385 [Benincasa hispida] >XP_038886124.1 uncharacterized protein LOC120076385 [Benincasa hispida] >XP_038886125.1 uncharacterized protein LOC120076385 [Benincasa hispida])

HSP 1 Score: 169.1 bits (427), Expect = 2.8e-38
Identity = 108/188 (57.45%), Postives = 120/188 (63.83%), Query Frame = 0


Query: 1   DMASASQ-VDSDTNFDVENEMKLQSEVVVCSGPENA-GDFCCLLPELERNSSENIPLPSQ 60
           D ASAS   DSDTNFDVEN+MK QSEV  C  PEN     CCLL EL+ NS+EN PL   
Sbjct: 164 DKASASHGGDSDTNFDVENQMKQQSEVQACFSPENVENGSCCLLTELKSNSTENGPLARA 223

Query: 61  --AVRDRI-ERERLKETDEYRRAMEEEWRTRKQQLQIQ---------------------- 120
              V+D + ERERLKETDEYRRAMEEEW TR+Q+LQIQ                      
Sbjct: 224 PLTVKDLVCERERLKETDEYRRAMEEEWTTRQQELQIQAEEAQRLRRKRKAERMRLLDMQ 283

Query: 121 ----------------DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGL 146
                           DEENINLKE+ RVDVRKEL K+EM CTDMASLLRGLGIQ+G+GL
Sbjct: 284 RRQMKRLEEVRETQKKDEENINLKERLRVDVRKELSKLEMNCTDMASLLRGLGIQIGSGL 343

[Close]

BLAST of MS001026.1 vs. NCBI nr
Match: XP_008445431.1 (PREDICTED: uncharacterized protein LOC103488453 [Cucumis melo] >XP_008445432.1 PREDICTED: uncharacterized protein LOC103488453 [Cucumis melo])

HSP 1 Score: 168.7 bits (426), Expect = 3.7e-38
Identity = 107/186 (57.53%), Postives = 118/186 (63.44%), Query Frame = 0


Query: 1   DMASASQ-VDSDTNFDVENEMKLQSEVVVCSGPENA-GDFCCLLPELERNSSENIPLPSQ 60
           D ASAS   DSDTNFDVEN+MK QSEV  CS PENA    CCLL EL+ NS+EN P    
Sbjct: 164 DKASASHGGDSDTNFDVENQMKQQSEVQACSSPENAENGGCCLLTELKSNSAENGPPAPL 223

Query: 61  AVRDRI-ERERLKETDEYRRAMEEEWRTRKQQLQIQ------------------------ 120
           + +D I ERERLKETDEYRRAMEEEW TR+Q+LQIQ                        
Sbjct: 224 STKDLICERERLKETDEYRRAMEEEWTTRQQELQIQAEEAHKLRRKRKAERMRLLDMQRR 283

Query: 121 --------------DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHP 146
                         DEENIN+KEQ R DVRKEL  +EM CTDMASLLRGLGIQVG+ L P
Sbjct: 284 QMKRLEEVRETQKKDEENINMKEQLRADVRKELSMLEMNCTDMASLLRGLGIQVGSSLQP 343

[Close]

BLAST of MS001026.1 vs. NCBI nr
Match: KAA0064778.1 (DnaJ domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 167.9 bits (424), Expect = 6.3e-38
Identity = 107/186 (57.53%), Postives = 117/186 (62.90%), Query Frame = 0


Query: 1   DMASASQ-VDSDTNFDVENEMKLQSEVVVCSGPENA-GDFCCLLPELERNSSENIPLPSQ 60
           D ASAS   DSDTNFDVEN+MK QSEV  CS PENA    CCLL EL+ NS+EN P    
Sbjct: 164 DKASASHGGDSDTNFDVENQMKQQSEVQACSSPENAENGGCCLLTELKSNSAENGPPEPL 223

Query: 61  AVRDRI-ERERLKETDEYRRAMEEEWRTRKQQLQIQ------------------------ 120
           + +D I ERERLKETDEYRRAMEEEW TR+Q+LQIQ                        
Sbjct: 224 STKDLICERERLKETDEYRRAMEEEWTTRQQELQIQAEEAHKLRRKRKAERMRLLDMQRR 283

Query: 121 --------------DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHP 146
                         DEENIN+KEQ R DVRKEL  +EM CTDMASLLRGLGIQVG+ L P
Sbjct: 284 QMKRLEEVRETQKKDEENINMKEQLRADVRKELSMLEMNCTDMASLLRGLGIQVGSSLQP 343

[Close]

BLAST of MS001026.1 vs. ExPASy TrEMBL
Match: A0A6J1BQR9 (uncharacterized protein LOC111004748 OS=Momordica charantia OX=3673 GN=LOC111004748 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 8.3e-44
Identity = 111/176 (63.07%), Postives = 114/176 (64.77%), Query Frame = 0


Query: 8   VDSDTNFDVENEMKLQSEVVVCSGPENAGDFCCLLPELERNSSENIPLPSQAVRDRIERE 67
           VDSDTNFDVENEMKLQSEVVVCSGPENAGDFC +                       ERE
Sbjct: 392 VDSDTNFDVENEMKLQSEVVVCSGPENAGDFCWI---------------------GFERE 451

Query: 68  RLKETDEYRRAMEEEWRTRKQQLQIQ---------------------------------- 127
           RLKETDEYRRAMEEEWRTRKQQLQIQ                                  
Sbjct: 452 RLKETDEYRRAMEEEWRTRKQQLQIQAEEARKLRRKRKADRMQLLDMHTRQMKRLEEVRE 511

Query: 128 ----DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQEVK 146
               DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQE++
Sbjct: 512 TRKKDEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQEIQ 546

[Close]

BLAST of MS001026.1 vs. ExPASy TrEMBL
Match: A0A1S3BCQ4 (uncharacterized protein LOC103488453 OS=Cucumis melo OX=3656 GN=LOC103488453 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.8e-38
Identity = 107/186 (57.53%), Postives = 118/186 (63.44%), Query Frame = 0


Query: 1   DMASASQ-VDSDTNFDVENEMKLQSEVVVCSGPENA-GDFCCLLPELERNSSENIPLPSQ 60
           D ASAS   DSDTNFDVEN+MK QSEV  CS PENA    CCLL EL+ NS+EN P    
Sbjct: 164 DKASASHGGDSDTNFDVENQMKQQSEVQACSSPENAENGGCCLLTELKSNSAENGPPAPL 223

Query: 61  AVRDRI-ERERLKETDEYRRAMEEEWRTRKQQLQIQ------------------------ 120
           + +D I ERERLKETDEYRRAMEEEW TR+Q+LQIQ                        
Sbjct: 224 STKDLICERERLKETDEYRRAMEEEWTTRQQELQIQAEEAHKLRRKRKAERMRLLDMQRR 283

Query: 121 --------------DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHP 146
                         DEENIN+KEQ R DVRKEL  +EM CTDMASLLRGLGIQVG+ L P
Sbjct: 284 QMKRLEEVRETQKKDEENINMKEQLRADVRKELSMLEMNCTDMASLLRGLGIQVGSSLQP 343

[Close]

BLAST of MS001026.1 vs. ExPASy TrEMBL
Match: A0A5A7VB02 (DnaJ domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00850 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 3.1e-38
Identity = 107/186 (57.53%), Postives = 117/186 (62.90%), Query Frame = 0


Query: 1   DMASASQ-VDSDTNFDVENEMKLQSEVVVCSGPENA-GDFCCLLPELERNSSENIPLPSQ 60
           D ASAS   DSDTNFDVEN+MK QSEV  CS PENA    CCLL EL+ NS+EN P    
Sbjct: 164 DKASASHGGDSDTNFDVENQMKQQSEVQACSSPENAENGGCCLLTELKSNSAENGPPEPL 223

Query: 61  AVRDRI-ERERLKETDEYRRAMEEEWRTRKQQLQIQ------------------------ 120
           + +D I ERERLKETDEYRRAMEEEW TR+Q+LQIQ                        
Sbjct: 224 STKDLICERERLKETDEYRRAMEEEWTTRQQELQIQAEEAHKLRRKRKAERMRLLDMQRR 283

Query: 121 --------------DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHP 146
                         DEENIN+KEQ R DVRKEL  +EM CTDMASLLRGLGIQVG+ L P
Sbjct: 284 QMKRLEEVRETQKKDEENINMKEQLRADVRKELSMLEMNCTDMASLLRGLGIQVGSSLQP 343

[Close]

BLAST of MS001026.1 vs. ExPASy TrEMBL
Match: A0A6J1HCZ3 (uncharacterized protein LOC111462841 OS=Cucurbita moschata OX=3662 GN=LOC111462841 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.5e-37
Identity = 107/186 (57.53%), Postives = 120/186 (64.52%), Query Frame = 0


Query: 1   DMASAS-QVDSDTNFDVENEMKLQSEVVVCSGPENA-GDFCCLLPELERNSSENIPLPSQ 60
           D ASAS +VDSDTN DVEN+MK +SEV  CS  +NA    CCLL   + NS+EN  L   
Sbjct: 164 DKASASHRVDSDTNCDVENQMKQKSEVQACSSSKNAENGGCCLLTGPKSNSAENGSLTPF 223

Query: 61  AVRDRI-ERERLKETDEYRRAMEEEWRTRKQQLQIQ------------------------ 120
            V+D I ERERLKETDEYRRAMEEEW TR+Q+LQIQ                        
Sbjct: 224 TVKDLICERERLKETDEYRRAMEEEWTTRQQELQIQAEEAQRLRRKRKADRMRLLDMQKR 283

Query: 121 --------------DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHP 146
                         DEENINLKEQ RV+VRKEL K+EM CTDMASLLRGLGIQVG+GLHP
Sbjct: 284 QMKRLEEVRETQKKDEENINLKEQLRVNVRKELSKLEMNCTDMASLLRGLGIQVGSGLHP 343

[Close]

BLAST of MS001026.1 vs. ExPASy TrEMBL
Match: A0A6J1K4A4 (uncharacterized protein LOC111492154 OS=Cucurbita maxima OX=3661 GN=LOC111492154 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 3.4e-37
Identity = 107/186 (57.53%), Postives = 120/186 (64.52%), Query Frame = 0


Query: 1   DMASAS-QVDSDTNFDVENEMKLQSEVVVCSGPENA-GDFCCLLPELERNSSENIPLPSQ 60
           D ASAS +VDSDTNFDVEN+MK +SEV  CS  +NA    CCLL   + NS+EN  L   
Sbjct: 164 DKASASHRVDSDTNFDVENQMKQKSEVQGCSSSKNAETGGCCLLTGPKSNSAENGSLTPF 223

Query: 61  AVRDRI-ERERLKETDEYRRAMEEEWRTRKQQLQIQ------------------------ 120
            V+D I ERERLKETDEYRRAMEEEW TR+Q+LQIQ                        
Sbjct: 224 TVKDLICERERLKETDEYRRAMEEEWTTRQQELQIQAEEAQRLRRKRKADRMRLLDMQKR 283

Query: 121 --------------DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHP 146
                         DEENINLKEQ RV+VRKEL K+EM CTDMASLLRGLGIQVG+G HP
Sbjct: 284 QMKRLEEVRETQKKDEENINLKEQLRVNVRKELSKLEMNCTDMASLLRGLGIQVGSGSHP 343

[Close]

BLAST of MS001026.1 vs. TAIR 10
Match: AT1G69060.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 77.8 bits (190), Expect = 8.0e-15
Identity = 50/124 (40.32%), Postives = 67/124 (54.03%), Query Frame = 0


Query: 59  AVRDRIERERLKETDEYRRAMEEEWRTRKQQLQIQ------------------------- 118
           A+   + RE LKETDEY+RA EEEW +R++QLQIQ                         
Sbjct: 460 AIDVMLNREILKETDEYKRAQEEEWESRQRQLQIQADEAQKQRKRRKLENMRKLEMERRQ 519

Query: 119 -------------DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPS 145
                        DEEN+N+KE+ R ++ K L+ +E+K  +MA+LLRGLGIQVG G+ P 
Sbjct: 520 KERVEEVRETQKKDEENMNMKEKVRAEITKSLKLLELKSFNMAALLRGLGIQVGGGISPL 579

The following BLAST results are available for this feature:

BLAST of MS001026.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022131619.1	1.7e-43	63.07	uncharacterized protein LOC111004748 [Momordica charantia]	[more]
XP_023546909.1	2.8e-38	58.06	uncharacterized protein LOC111805871 [Cucurbita pepo subsp. pepo] >XP_023546910....	[more]
XP_038886123.1	2.8e-38	57.45	uncharacterized protein LOC120076385 [Benincasa hispida] >XP_038886124.1 unchara...	[more]
XP_008445431.1	3.7e-38	57.53	PREDICTED: uncharacterized protein LOC103488453 [Cucumis melo] >XP_008445432.1 P...	[more]
KAA0064778.1	6.3e-38	57.53	DnaJ domain-containing protein [Cucumis melo var. makuwa]	[more]

BLAST of MS001026.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS001026.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BQR9	8.3e-44	63.07	uncharacterized protein LOC111004748 OS=Momordica charantia OX=3673 GN=LOC111004...	[more]
A0A1S3BCQ4	1.8e-38	57.53	uncharacterized protein LOC103488453 OS=Cucumis melo OX=3656 GN=LOC103488453 PE=...	[more]
A0A5A7VB02	3.1e-38	57.53	DnaJ domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A6J1HCZ3	1.5e-37	57.53	uncharacterized protein LOC111462841 OS=Cucurbita moschata OX=3662 GN=LOC1114628...	[more]
A0A6J1K4A4	3.4e-37	57.53	uncharacterized protein LOC111492154 OS=Cucurbita maxima OX=3661 GN=LOC111492154...	[more]

BLAST of MS001026.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69060.1	8.0e-15	40.32	Chaperone DnaJ-domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 61..81
None	No IPR available	PANTHER	PTHR36335:SF1	CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN	coord: 91..145 coord: 43..96
None	No IPR available	PANTHER	PTHR36335	CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN	coord: 91..145 coord: 43..96

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS001026	MS001026	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS001026.1-cds	MS001026.1-cds-scaffold36:929105..929260	CDS
MS001026.1-cds	MS001026.1-cds-scaffold36:930136..930222	CDS
MS001026.1-cds	MS001026.1-cds-scaffold36:930224..930415	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS001026.1	MS001026.1-protein	polypeptide