MS000499.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS000499.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein DEFECTIVE IN MERISTEM SILENCING 3-like
Location	scaffold44: 2115611 .. 2118036 (-)
Sequence length	1188
RNA-Seq Expression	MS000499.1
Synteny	MS000499.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACTGGATCAGATTGACAAGTTGAAAGTCCTAAAAAATGAGCTGCAAGATGGAGGGCTCTCTCCTGCTGATCCAATCGACGTCTGTTCCAAGGTCTCAGAAGTTATTTTCAAAAAAATTACTTTCTTGCCTCTTTCTTCTGTTAAGTTTGTTAGATTATAAGTTTAGTGGCAAGTTGCAAATTTTCTATCTTCATTTGGTTCATGCAGAGACTTCAAGACGATTTGCAAACTCTGGGGATGAAAATCCAGCTGCACGAGGACAACATAAGATTCCTAAAGACTCTGAAAGACAAATTGGTTGATTCCATCATTGATCTGCAAGGTATTTTCATTTCCTTCCTGAACAAAAATTCATACTTTCGTAGATATTTAAGACAATGATGTCTTTTCCAACACTTGCATAAATTTTCTTACAGTTGTCTTAGGAAAGTACCATCTTTCGAGTACGCCTGGGATTGAGAACAAGGATGGTTCTGATACTCAAAATGAAGATAAGGCATCAGATCAGAAAAAAATATTGGAGCAGGAAAACACTGCTGCTGGCATCTTGTGCCAGCTGAGAACTAACCCAAAGATGCTTGCTTCTGACCCCACACTGATTGATGATGTTCTTGGTGTTGTTGCTGAATTAGGAAAAGTAGATGACAGCAGCCTTGGCAGGTCTATTTTACTTATACTTACATTTGCTTCTCATTTTTCAAGTAAATTCATAGTCTCATCTTGGTTTTCTCTCATGTGCATAATTTTTTTCTTTGAATGTGATGCAATGACAGTGGGATGTGCCATGGGGATGGAATAGTTTAGGGTGCTTGATGGTAGAGCCAAATATGAGAACACTAGCTATTCATTTTATGTTGAATTACCATTTTAGTCTCCACGGTTTGTATTTGAAAGGTATTAAAAGTATCAATTCGGTCTTTGATTCAATCTCCCGCGTTACTATAAATTAACATTTTTCTTGTGTGGTTACTGGTTTGTGTTTCTGGACGTGGTAGTGAGATGATGAGTTGATATTTAGTATAAGCCTATAAGGTATACCACGTACAAAGAAAACGTGCCATGTAAGAAAAATATTAACAAGGATGTTTAGCAAGATTTGACCAAACCATAGAAACCAAATTGAGAGGGAGTACAAACTACATGAATTAAAATGATAATTTTAACCTTCATTATAATACTAACATTTTGCAACTATTTTTTTGAAACTTCCCAAATTGAATTTGAGCTTAAAGTTAAGGTGTTTGATAGCATAAGGTTTTACTTTGTCCTTAGCAATAGATTAGCGGGTATAGTGAGAGATGGCTATTGGTTCTTATTAATTTTAGTGATCTGAGGAAAAAATTCAAATAGGAAGATAGTTAATGAATAACATGAGACCGTTCTGTACTTTTGCTTACATGTTTTTCTTTATCCTTTTCTGTTTTTGTTTCGGAATACAGCCTTTTATCAGAGTACCTAGGAAAAGAGACCATGTTGGCTATTGTCTGCAAGACATACAATGGAGTCAAATCTCTAGAAAAGTATGACAAGGAAGGAAGCATTAATAAAACATCTGGGCTCCATGGGTTTGGCGCTTCAATCGGGAGAACTTTAGAGGGTCGGTTCAATGTCATATCTCTCGAAACATTGCGGTACTTGTCTCTTACATGCCATGTTTGTTAGGAAATTCTTAGACTTTGGACATAAATATTCAGGAATCCTTCTCCAACTGAAAACTCAACAAACTGTTTTGTTATTTTTTGCCTGTAGACCATATTCTGGTGAATTTGTGGCTGCTGATCCACAAAGAAGGCTTGATCTTCCAAAGCCAAGATTTCCTAATGGGGACTCTCCACCTGGTTTTCTTGGATATGCTGTTAATATGATAAACATAGACACAGCACATTTGTATTTTCTCACAGCCAGTGGATATGGTCTTAGAGAGACTCTGTTTTATTCTCTATTTTCTTGTCTGCAAATCTACAGAACAAGGGTGGAAATGCTACAAGCCGTTCCTTGTATAACTGATGGAGCACTCTCTTTAGATGGTGGTATTATTAAGAGAAGCGGACTTTTTTATCTTGGCAATAGGTACGAATCTCTTCTTTGCAACTTGAATGATTGCATCGATTATGAATCTGAATCTCTACTGTGGTCATTGTCCCAACACTTGGGGATTCTCTGTCGCTGAATTTCTACTTTTATGCATTCCATCGTGTTAGGGACGATGTGAAGGTGAGCTTTTCAAAGTCCTCAACAAATTCAAGCCTACCTGACCATTACATAGAATCCGAGAGGCAGATGAAAGAAATGAAATGGAGAAAGGAAAAAATGCTTGAAGATATAACGAGAGAACAAGCAATGCTAGATAGCACGAGGCTCAATTTCGAAAGAAAAAAGGCAGATTTTGTCAAGTTTATAGCTGAAACTGCCACTCGGGTA

mRNA sequence

ATGAAACTGGATCAGATTGACAAGTTGAAAGTCCTAAAAAATGAGCTGCAAGATGGAGGGCTCTCTCCTGCTGATCCAATCGACGTCTGTTCCAAGAGACTTCAAGACGATTTGCAAACTCTGGGGATGAAAATCCAGCTGCACGAGGACAACATAAGATTCCTAAAGACTCTGAAAGACAAATTGGTTGATTCCATCATTGATCTGCAAGTTGTCTTAGGAAAGTACCATCTTTCGAGTACGCCTGGGATTGAGAACAAGGATGGTTCTGATACTCAAAATGAAGATAAGGCATCAGATCAGAAAAAAATATTGGAGCAGGAAAACACTGCTGCTGGCATCTTGTGCCAGCTGAGAACTAACCCAAAGATGCTTGCTTCTGACCCCACACTGATTGATGATGTTCTTGGTGTTGTTGCTGAATTAGGAAAAGTAGATGACAGCAGCCTTGGCAGCCTTTTATCAGAGTACCTAGGAAAAGAGACCATGTTGGCTATTGTCTGCAAGACATACAATGGAGTCAAATCTCTAGAAAAGTATGACAAGGAAGGAAGCATTAATAAAACATCTGGGCTCCATGGGTTTGGCGCTTCAATCGGGAGAACTTTAGAGGGTCGGTTCAATGTCATATCTCTCGAAACATTGCGACCATATTCTGGTGAATTTGTGGCTGCTGATCCACAAAGAAGGCTTGATCTTCCAAAGCCAAGATTTCCTAATGGGGACTCTCCACCTGGTTTTCTTGGATATGCTGTTAATATGATAAACATAGACACAGCACATTTGTATTTTCTCACAGCCAGTGGATATGGTCTTAGAGAGACTCTGTTTTATTCTCTATTTTCTTGTCTGCAAATCTACAGAACAAGGGTGGAAATGCTACAAGCCGTTCCTTGTATAACTGATGGAGCACTCTCTTTAGATGGTGGTATTATTAAGAGAAGCGGACTTTTTTATCTTGGCAATAGGGACGATGTGAAGGTGAGCTTTTCAAAGTCCTCAACAAATTCAAGCCTACCTGACCATTACATAGAATCCGAGAGGCAGATGAAAGAAATGAAATGGAGAAAGGAAAAAATGCTTGAAGATATAACGAGAGAACAAGCAATGCTAGATAGCACGAGGCTCAATTTCGAAAGAAAAAAGGCAGATTTTGTCAAGTTTATAGCTGAAACTGCCACTCGGGTA

Coding sequence (CDS)

ATGAAACTGGATCAGATTGACAAGTTGAAAGTCCTAAAAAATGAGCTGCAAGATGGAGGGCTCTCTCCTGCTGATCCAATCGACGTCTGTTCCAAGAGACTTCAAGACGATTTGCAAACTCTGGGGATGAAAATCCAGCTGCACGAGGACAACATAAGATTCCTAAAGACTCTGAAAGACAAATTGGTTGATTCCATCATTGATCTGCAAGTTGTCTTAGGAAAGTACCATCTTTCGAGTACGCCTGGGATTGAGAACAAGGATGGTTCTGATACTCAAAATGAAGATAAGGCATCAGATCAGAAAAAAATATTGGAGCAGGAAAACACTGCTGCTGGCATCTTGTGCCAGCTGAGAACTAACCCAAAGATGCTTGCTTCTGACCCCACACTGATTGATGATGTTCTTGGTGTTGTTGCTGAATTAGGAAAAGTAGATGACAGCAGCCTTGGCAGCCTTTTATCAGAGTACCTAGGAAAAGAGACCATGTTGGCTATTGTCTGCAAGACATACAATGGAGTCAAATCTCTAGAAAAGTATGACAAGGAAGGAAGCATTAATAAAACATCTGGGCTCCATGGGTTTGGCGCTTCAATCGGGAGAACTTTAGAGGGTCGGTTCAATGTCATATCTCTCGAAACATTGCGACCATATTCTGGTGAATTTGTGGCTGCTGATCCACAAAGAAGGCTTGATCTTCCAAAGCCAAGATTTCCTAATGGGGACTCTCCACCTGGTTTTCTTGGATATGCTGTTAATATGATAAACATAGACACAGCACATTTGTATTTTCTCACAGCCAGTGGATATGGTCTTAGAGAGACTCTGTTTTATTCTCTATTTTCTTGTCTGCAAATCTACAGAACAAGGGTGGAAATGCTACAAGCCGTTCCTTGTATAACTGATGGAGCACTCTCTTTAGATGGTGGTATTATTAAGAGAAGCGGACTTTTTTATCTTGGCAATAGGGACGATGTGAAGGTGAGCTTTTCAAAGTCCTCAACAAATTCAAGCCTACCTGACCATTACATAGAATCCGAGAGGCAGATGAAAGAAATGAAATGGAGAAAGGAAAAAATGCTTGAAGATATAACGAGAGAACAAGCAATGCTAGATAGCACGAGGCTCAATTTCGAAAGAAAAAAGGCAGATTTTGTCAAGTTTATAGCTGAAACTGCCACTCGGGTA

Protein sequence

MKLDQIDKLKVLKNELQDGGLSPADPIDVCSKRLQDDLQTLGMKIQLHEDNIRFLKTLKDKLVDSIIDLQVVLGKYHLSSTPGIENKDGSDTQNEDKASDQKKILEQENTAAGILCQLRTNPKMLASDPTLIDDVLGVVAELGKVDDSSLGSLLSEYLGKETMLAIVCKTYNGVKSLEKYDKEGSINKTSGLHGFGASIGRTLEGRFNVISLETLRPYSGEFVAADPQRRLDLPKPRFPNGDSPPGFLGYAVNMINIDTAHLYFLTASGYGLRETLFYSLFSCLQIYRTRVEMLQAVPCITDGALSLDGGIIKRSGLFYLGNRDDVKVSFSKSSTNSSLPDHYIESERQMKEMKWRKEKMLEDITREQAMLDSTRLNFERKKADFVKFIAETATRV

Homology

[Close]

BLAST of MS000499.1 vs. NCBI nr
Match: XP_022141241.1 (protein DEFECTIVE IN MERISTEM SILENCING 3-like [Momordica charantia] >XP_022141242.1 protein DEFECTIVE IN MERISTEM SILENCING 3-like [Momordica charantia])

HSP 1 Score: 771.5 bits (1991), Expect = 3.4e-219
Identity = 392/395 (99.24%), Postives = 394/395 (99.75%), Query Frame = 0


Query: 1   MKLDQIDKLKVLKNELQDGGLSPADPIDVCSKRLQDDLQTLGMKIQLHEDNIRFLKTLKD 60
           MKLDQIDKLKVLKNELQDGGLSPADPIDVCSKRLQDDLQTLGMKIQLHEDNIRFLKTLKD
Sbjct: 1   MKLDQIDKLKVLKNELQDGGLSPADPIDVCSKRLQDDLQTLGMKIQLHEDNIRFLKTLKD 60

Query: 61  KLVDSIIDLQVVLGKYHLSSTPGIENKDGSDTQNEDKASDQKKILEQENTAAGILCQLRT 120
           KLVDSIIDLQVVLGKYHLSSTPGIENKDGSDTQ+EDKASDQKKILEQENTAAGILCQLRT
Sbjct: 61  KLVDSIIDLQVVLGKYHLSSTPGIENKDGSDTQSEDKASDQKKILEQENTAAGILCQLRT 120

Query: 121 NPKMLASDPTLIDDVLGVVAELGKVDDSSLGSLLSEYLGKETMLAIVCKTYNGVKSLEKY 180
           NPKMLASDPTLIDDVLGVVAELGKVDDSSLGSLLSEYLGKETMLAIVCKTYNGVKSLEKY
Sbjct: 121 NPKMLASDPTLIDDVLGVVAELGKVDDSSLGSLLSEYLGKETMLAIVCKTYNGVKSLEKY 180

Query: 181 DKEGSINKTSGLHGFGASIGRTLEGRFNVISLETLRPYSGEFVAADPQRRLDLPKPRFPN 240
           DKEGSINKTSGLHGFGASIGRTLEGRFNVISLETLRPYSGEFVAADPQRRLDLPKPRFPN
Sbjct: 181 DKEGSINKTSGLHGFGASIGRTLEGRFNVISLETLRPYSGEFVAADPQRRLDLPKPRFPN 240

Query: 241 GDSPPGFLGYAVNMINIDTAHLYFLTASGYGLRETLFYSLFSCLQIYRTRVEMLQAVPCI 300
           GDSPPGFLGYAVNMINIDTAHLYFLTASGYGLRETLFYSLFSCLQIY+TR EMLQAVPCI
Sbjct: 241 GDSPPGFLGYAVNMINIDTAHLYFLTASGYGLRETLFYSLFSCLQIYKTRAEMLQAVPCI 300

Query: 301 TDGALSLDGGIIKRSGLFYLGNRDDVKVSFSKSSTNSSLPDHYIESERQMKEMKWRKEKM 360
           TDGALSLDGGIIKRSGLFYLGNRDDVKVSFSKSSTNSSLPDHYIESERQMKEMKWRKEKM
Sbjct: 301 TDGALSLDGGIIKRSGLFYLGNRDDVKVSFSKSSTNSSLPDHYIESERQMKEMKWRKEKM 360

Query: 361 LEDITREQAMLDSTRLNFERKKADFVKFIAETATR 396
           LEDITREQAMLDSTRLNFERKKADFVKFIAETATR
Sbjct: 361 LEDITREQAMLDSTRLNFERKKADFVKFIAETATR 395

[Close]

BLAST of MS000499.1 vs. NCBI nr
Match: XP_022985034.1 (protein DEFECTIVE IN MERISTEM SILENCING 3-like [Cucurbita maxima])

HSP 1 Score: 659.1 bits (1699), Expect = 2.5e-185
Identity = 328/395 (83.04%), Postives = 361/395 (91.39%), Query Frame = 0


Query: 1   MKLDQIDKLKVLKNELQDGGLSPADPIDVCSKRLQDDLQTLGMKIQLHEDNIRFLKTLKD 60
           MKLD+IDK +V K+E+QDGGLS  DP ++ SK+LQDDLQTLG K+QLHEDNIRFL+TLKD
Sbjct: 1   MKLDEIDKCRVPKDEMQDGGLSHEDPTNLRSKKLQDDLQTLGTKLQLHEDNIRFLRTLKD 60

Query: 61  KLVDSIIDLQVVLGKYHLSSTPGIENKDGSDTQNEDKASDQKKILEQENTAAGILCQLRT 120
           K VDSIIDLQV LGKYH SSTP IE +DG+DTQ+EDK SDQK+IL+QEN+AA ILCQL+T
Sbjct: 61  KFVDSIIDLQVTLGKYHASSTPKIETQDGADTQSEDKPSDQKQILQQENSAASILCQLKT 120

Query: 121 NPKMLASDPTLIDDVLGVVAELGKVDDSSLGSLLSEYLGKETMLAIVCKTYNGVKSLEKY 180
           NPKMLASDPTL DDVLGVVAELGKVDDS L SLLSEYLG ETMLAIVCKTYNGVKSLEKY
Sbjct: 121 NPKMLASDPTLSDDVLGVVAELGKVDDSVLSSLLSEYLGTETMLAIVCKTYNGVKSLEKY 180

Query: 181 DKEGSINKTSGLHGFGASIGRTLEGRFNVISLETLRPYSGEFVAADPQRRLDLPKPRFPN 240
           DKEG INKTSGLHGFG S+G+TLEGRFNVISLETLRPY+G FVA DPQ+RLD+P PR PN
Sbjct: 181 DKEGCINKTSGLHGFGTSLGKTLEGRFNVISLETLRPYAGNFVANDPQKRLDIPNPRLPN 240

Query: 241 GDSPPGFLGYAVNMINIDTAHLYFLTASGYGLRETLFYSLFSCLQIYRTRVEMLQAVPCI 300
           GD PPGF+GYAVNMINID  +L+FLTASGYGLRETLFYSLFSCLQIY+TR EMLQAVPCI
Sbjct: 241 GDCPPGFIGYAVNMINIDRTYLFFLTASGYGLRETLFYSLFSCLQIYKTRTEMLQAVPCI 300

Query: 301 TDGALSLDGGIIKRSGLFYLGNRDDVKVSFSKSSTNSSLPDHYIESERQMKEMKWRKEKM 360
           TDGALSLDGGIIKRSGLF LGNRDDVKV FSK+STNSSLPDHY ESERQMKEMKW+KEK+
Sbjct: 301 TDGALSLDGGIIKRSGLFCLGNRDDVKVRFSKTSTNSSLPDHYTESERQMKEMKWKKEKI 360

Query: 361 LEDITREQAMLDSTRLNFERKKADFVKFIAETATR 396
           LED+ REQA+LDSTRLNFERKK +FV+F+AETA R
Sbjct: 361 LEDMRREQALLDSTRLNFERKKVEFVQFLAETAAR 395

[Close]

BLAST of MS000499.1 vs. NCBI nr
Match: XP_022923033.1 (protein DEFECTIVE IN MERISTEM SILENCING 3-like [Cucurbita moschata])

HSP 1 Score: 654.4 bits (1687), Expect = 6.1e-184
Identity = 325/395 (82.28%), Postives = 362/395 (91.65%), Query Frame = 0


Query: 1   MKLDQIDKLKVLKNELQDGGLSPADPIDVCSKRLQDDLQTLGMKIQLHEDNIRFLKTLKD 60
           MKLD+IDK +V K+E+Q+GGLS  DP ++ SK+LQDDLQTLG K+QLHEDNIRFL+TLKD
Sbjct: 1   MKLDEIDKCRVPKDEMQEGGLSHEDPTNLRSKKLQDDLQTLGTKLQLHEDNIRFLRTLKD 60

Query: 61  KLVDSIIDLQVVLGKYHLSSTPGIENKDGSDTQNEDKASDQKKILEQENTAAGILCQLRT 120
           KLVDSIIDLQV LGKYH SSTP IE +DG+DTQ+EDK SDQK+IL++EN+AA ILCQL+T
Sbjct: 61  KLVDSIIDLQVTLGKYHASSTPKIETQDGADTQSEDKLSDQKQILQEENSAASILCQLKT 120

Query: 121 NPKMLASDPTLIDDVLGVVAELGKVDDSSLGSLLSEYLGKETMLAIVCKTYNGVKSLEKY 180
           NPKMLASDPTL DDVLGVVAELGKVDDS L SLLSEYLG ETMLAIVCKTYNGVKSLEKY
Sbjct: 121 NPKMLASDPTLSDDVLGVVAELGKVDDSVLSSLLSEYLGTETMLAIVCKTYNGVKSLEKY 180

Query: 181 DKEGSINKTSGLHGFGASIGRTLEGRFNVISLETLRPYSGEFVAADPQRRLDLPKPRFPN 240
           DKEG INKTSGLHGFG S+G+TLEGRFNVISLETLRPY+G+FVA DPQ+RLD+P PR PN
Sbjct: 181 DKEGCINKTSGLHGFGTSLGKTLEGRFNVISLETLRPYAGDFVANDPQKRLDIPNPRLPN 240

Query: 241 GDSPPGFLGYAVNMINIDTAHLYFLTASGYGLRETLFYSLFSCLQIYRTRVEMLQAVPCI 300
           GD P GF+GYAVNMINID  +L+FLTASGYGLRETLFYSLFSCLQIY+TR EMLQAVPCI
Sbjct: 241 GDCPAGFIGYAVNMINIDRTYLFFLTASGYGLRETLFYSLFSCLQIYKTRTEMLQAVPCI 300

Query: 301 TDGALSLDGGIIKRSGLFYLGNRDDVKVSFSKSSTNSSLPDHYIESERQMKEMKWRKEKM 360
           TDGALSLDGGIIKRSGLF LGNRDDVKV FSK+STNSSLPDHY ESERQMKEMKW+KEK+
Sbjct: 301 TDGALSLDGGIIKRSGLFCLGNRDDVKVRFSKTSTNSSLPDHYTESERQMKEMKWKKEKI 360

Query: 361 LEDITREQAMLDSTRLNFERKKADFVKFIAETATR 396
           LED+ REQA+LDSTRLNFERK+ +FV+F+AETA R
Sbjct: 361 LEDMRREQALLDSTRLNFERKRVEFVQFLAETAAR 395

[Close]

BLAST of MS000499.1 vs. NCBI nr
Match: KAG6576650.1 (Protein DEFECTIVE IN MERISTEM SILENCING 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 654.1 bits (1686), Expect = 7.9e-184
Identity = 325/395 (82.28%), Postives = 362/395 (91.65%), Query Frame = 0


Query: 1   MKLDQIDKLKVLKNELQDGGLSPADPIDVCSKRLQDDLQTLGMKIQLHEDNIRFLKTLKD 60
           MKLD+IDK +V K+E+Q+GGLS  DP ++ SK+LQDDLQTLG K+QLHEDNIRFL+TLKD
Sbjct: 41  MKLDEIDKCRVPKDEMQEGGLSHEDPTNLRSKKLQDDLQTLGTKLQLHEDNIRFLRTLKD 100

Query: 61  KLVDSIIDLQVVLGKYHLSSTPGIENKDGSDTQNEDKASDQKKILEQENTAAGILCQLRT 120
           KLVDSIIDLQV LGKYH SSTP IE +DG+DTQ+EDK SDQK+IL++EN+AA ILCQL+T
Sbjct: 101 KLVDSIIDLQVTLGKYHASSTPKIETQDGADTQSEDKLSDQKQILQEENSAASILCQLKT 160

Query: 121 NPKMLASDPTLIDDVLGVVAELGKVDDSSLGSLLSEYLGKETMLAIVCKTYNGVKSLEKY 180
           NPKMLASDPTL DDVLGVVAELGKVDDS L SLLSEYLG ETMLAIVCKTYNGVKSLEKY
Sbjct: 161 NPKMLASDPTLSDDVLGVVAELGKVDDSVLSSLLSEYLGTETMLAIVCKTYNGVKSLEKY 220

Query: 181 DKEGSINKTSGLHGFGASIGRTLEGRFNVISLETLRPYSGEFVAADPQRRLDLPKPRFPN 240
           DKEG INKTSGLHGFG S+G+TLEGRFNVISLETLRPY+G+FVA DPQ+RLD+P PR PN
Sbjct: 221 DKEGCINKTSGLHGFGTSLGKTLEGRFNVISLETLRPYAGDFVANDPQKRLDIPDPRLPN 280

Query: 241 GDSPPGFLGYAVNMINIDTAHLYFLTASGYGLRETLFYSLFSCLQIYRTRVEMLQAVPCI 300
           GD P GF+GYAVNMINID  +L+FLTASGYGLRETLFYSLFSCLQIY+TR EMLQAVPCI
Sbjct: 281 GDCPAGFIGYAVNMINIDRTYLFFLTASGYGLRETLFYSLFSCLQIYKTRTEMLQAVPCI 340

Query: 301 TDGALSLDGGIIKRSGLFYLGNRDDVKVSFSKSSTNSSLPDHYIESERQMKEMKWRKEKM 360
           TDGALSLDGGIIKRSGLF LGNRDDVKV FSK+STNSSLPDHY ESERQMKEMKW+KEK+
Sbjct: 341 TDGALSLDGGIIKRSGLFCLGNRDDVKVRFSKTSTNSSLPDHYTESERQMKEMKWKKEKI 400

Query: 361 LEDITREQAMLDSTRLNFERKKADFVKFIAETATR 396
           LED+ REQA+LDSTRLNFERK+ +FV+F+AETA R
Sbjct: 401 LEDMRREQALLDSTRLNFERKRVEFVQFLAETAAR 435

[Close]

BLAST of MS000499.1 vs. NCBI nr
Match: XP_023551720.1 (protein DEFECTIVE IN MERISTEM SILENCING 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 653.3 bits (1684), Expect = 1.4e-183
Identity = 325/395 (82.28%), Postives = 361/395 (91.39%), Query Frame = 0


Query: 1   MKLDQIDKLKVLKNELQDGGLSPADPIDVCSKRLQDDLQTLGMKIQLHEDNIRFLKTLKD 60
           MKLD+IDK +V K+E+Q+GGLS  DP ++ SK+LQDDLQTLG K+QLHEDNIRFL+TLKD
Sbjct: 1   MKLDEIDKCRVPKDEMQEGGLSHEDPTNLRSKKLQDDLQTLGTKLQLHEDNIRFLRTLKD 60

Query: 61  KLVDSIIDLQVVLGKYHLSSTPGIENKDGSDTQNEDKASDQKKILEQENTAAGILCQLRT 120
           KLVDSIIDLQV LGKYH SSTP IE +DG+DTQ+EDK SDQK+IL++EN+AA ILCQL+T
Sbjct: 61  KLVDSIIDLQVTLGKYHASSTPKIETQDGADTQSEDKLSDQKQILQEENSAASILCQLKT 120

Query: 121 NPKMLASDPTLIDDVLGVVAELGKVDDSSLGSLLSEYLGKETMLAIVCKTYNGVKSLEKY 180
           NPKMLASDPTL DDVLGVVAELGKVDDS L SLLSEYLG ETMLAIVCKTYNGVKSLEKY
Sbjct: 121 NPKMLASDPTLSDDVLGVVAELGKVDDSVLSSLLSEYLGTETMLAIVCKTYNGVKSLEKY 180

Query: 181 DKEGSINKTSGLHGFGASIGRTLEGRFNVISLETLRPYSGEFVAADPQRRLDLPKPRFPN 240
           DKEG INKTSGLHGFG S+G+TLEGRFNVISLETLRPY+G+FVA DPQ+RLD+P PR PN
Sbjct: 181 DKEGCINKTSGLHGFGTSLGKTLEGRFNVISLETLRPYAGDFVANDPQKRLDIPNPRLPN 240

Query: 241 GDSPPGFLGYAVNMINIDTAHLYFLTASGYGLRETLFYSLFSCLQIYRTRVEMLQAVPCI 300
           GD P GF+GYAVNMINID  +L+FLT SGYGLRETLFYSLFSCLQIY+TR EMLQAVPCI
Sbjct: 241 GDCPAGFIGYAVNMINIDRTYLFFLTPSGYGLRETLFYSLFSCLQIYKTRTEMLQAVPCI 300

Query: 301 TDGALSLDGGIIKRSGLFYLGNRDDVKVSFSKSSTNSSLPDHYIESERQMKEMKWRKEKM 360
           TDGALSLDGGIIKRSGLF LGNRDDVKV FSK+STNSSLPDHY ESERQMKEMKW+KEK+
Sbjct: 301 TDGALSLDGGIIKRSGLFCLGNRDDVKVRFSKTSTNSSLPDHYTESERQMKEMKWKKEKI 360

Query: 361 LEDITREQAMLDSTRLNFERKKADFVKFIAETATR 396
           LED+ REQA+LDSTRLNFERKK +FV+F+AETA R
Sbjct: 361 LEDMRREQALLDSTRLNFERKKMEFVQFLAETAAR 395

[Close]

BLAST of MS000499.1 vs. ExPASy Swiss-Prot
Match: Q94A79 (Protein DEFECTIVE IN MERISTEM SILENCING 3 OS=Arabidopsis thaliana OX=3702 GN=DMS3 PE=1 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 2.2e-104
Identity = 202/394 (51.27%), Postives = 281/394 (71.32%), Query Frame = 0


Query: 1   MKLDQIDKLKVLKNELQD-GGLSPADPIDVCSKRLQDDLQTLGMKIQLHEDNIRFLKTLK 60
           M LDQ     V +NE Q+ GG++ A+     SKRL+ DL+ +G KI+ HEDN++FLK+ K
Sbjct: 24  MNLDQ--SSPVARNETQNGGGIAHAEFAMFNSKRLESDLEAMGNKIKQHEDNLKFLKSQK 83

Query: 61  DKLVDSIIDLQVVLGKYHLSSTPGIENKDGSDTQNEDKASDQKKILEQENTAAGILCQLR 120
           +K+ ++I+DLQV + K + S TP  EN D S  Q ED      +IL  EN+AAG+L  + 
Sbjct: 84  NKMDEAIVDLQVHMSKLNSSPTPRSENSDNS-LQGED---INAQILRHENSAAGVLSLVE 143

Query: 121 TNPKMLASDPTLIDDVLGVVAELGKVDDSSLGSLLSEYLGKETMLAIVCKTYNGVKSLEK 180
           T     AS   L   V+GVVA+LGKV+D +L  +LS YLG  +MLA+VC+ Y  V +LE 
Sbjct: 144 TLHGAQASQLMLTKGVVGVVAKLGKVNDENLSQILSNYLGTRSMLAVVCRNYESVTALEA 203

Query: 181 YDKEGSINKTSGLHGFGASIGRTLEGRFNVISLETLRPYSGEFVAADPQRRLDLPKPRFP 240
           YD  G+I+  +GLH  G+SIGR +   F+ I LE LRPY G+ +A D QRRLDL KP+ P
Sbjct: 204 YDNHGNIDINAGLHCLGSSIGREIGDSFDAICLENLRPYVGQHIADDLQRRLDLLKPKLP 263

Query: 241 NGDSPPGFLGYAVNMINIDTAHLYFLTASGYGLRETLFYSLFSCLQIYRTRVEMLQAVPC 300
           NG+ PPGFLG+AVNMI ID A+L  +T+ GYGLRETLFY+LFS LQ+Y+TR +M+ A+PC
Sbjct: 264 NGECPPGFLGFAVNMIQIDPAYLLCVTSYGYGLRETLFYNLFSRLQVYKTRADMISALPC 323

Query: 301 ITDGALSLDGGIIKRSGLFYLGNRDDVKVSFSKSSTNSSLPDHYIESERQMKEMKWRKEK 360
           I+DGA+SLDGGII+++G+F LGNRD+V V F+K + + ++ D+Y E+E++MKE+KW+KEK
Sbjct: 324 ISDGAVSLDGGIIRKTGIFNLGNRDEVNVRFAKPTASRTM-DNYSEAEKKMKELKWKKEK 383

Query: 361 MLEDITREQAMLDSTRLNFERKKADFVKFIAETA 394
            LEDI REQ + +    NF +KK +FV+ +A+++
Sbjct: 384 TLEDIKREQVLREHAVFNFGKKKEEFVRCLAQSS 410

[Close]

BLAST of MS000499.1 vs. ExPASy Swiss-Prot
Match: F4KFS5 (Structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 OS=Arabidopsis thaliana OX=3702 GN=GMI1 PE=2 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.8e-37
Identity = 97/227 (42.73%), Postives = 129/227 (56.83%), Query Frame = 0


Query: 97   KASDQKKILEQ-ENTAAGILCQLRTNPKMLASDPTLIDDVLGVVAELGKVDDSSLGSLLS 156
            K S  K+I E+  +TAA + C L        S       + GVVA LG V  +SL  +LS
Sbjct: 1314 KESMMKQIEEKHHDTAASVFCCLYRKAPPPRSLFLSQKGMFGVVALLGSVASTSLSRVLS 1373

Query: 157  EYLGKETMLAIVCKTYNGVKSLEKYDKEGSINKTSGLHGFGASIGRTLEGRFNVISLETL 216
            EYLGK+TML++VCK+       ++Y K              AS+GR++  RF VI L+  
Sbjct: 1374 EYLGKDTMLSLVCKSSQFGPKSDEYRK---------FQSEAASLGRSITNRFLVICLDAT 1433

Query: 217  RPYSGEFVAADPQRRLDLPKPRFPNGDSPPGFLGYAVNMINIDTAHLYFLTASGYGLRET 276
            RP+    V  DPQ+RL +  P  PNGD  PGF GYAVNMI++ +  L   ++SGYGLRET
Sbjct: 1434 RPWRNGLVRNDPQKRLAMDNPYLPNGDPIPGFKGYAVNMIDLASEELDIQSSSGYGLRET 1493

Query: 277  LFYSLFSCLQIYRTRVEMLQAVPCITDG-ALSLDGGIIKRSGLFYLG 322
            LFY +F  LQ+Y T   +  A+P I  G A+SLDG I + +G  Y G
Sbjct: 1494 LFYGVFRELQVYETAEHLEAALPHINGGDAVSLDGVIARENGFIYSG 1531

[Close]

BLAST of MS000499.1 vs. ExPASy TrEMBL
Match: A0A6J1CIJ2 (protein DEFECTIVE IN MERISTEM SILENCING 3-like OS=Momordica charantia OX=3673 GN=LOC111011690 PE=4 SV=1)

HSP 1 Score: 771.5 bits (1991), Expect = 1.6e-219
Identity = 392/395 (99.24%), Postives = 394/395 (99.75%), Query Frame = 0


Query: 1   MKLDQIDKLKVLKNELQDGGLSPADPIDVCSKRLQDDLQTLGMKIQLHEDNIRFLKTLKD 60
           MKLDQIDKLKVLKNELQDGGLSPADPIDVCSKRLQDDLQTLGMKIQLHEDNIRFLKTLKD
Sbjct: 1   MKLDQIDKLKVLKNELQDGGLSPADPIDVCSKRLQDDLQTLGMKIQLHEDNIRFLKTLKD 60

Query: 61  KLVDSIIDLQVVLGKYHLSSTPGIENKDGSDTQNEDKASDQKKILEQENTAAGILCQLRT 120
           KLVDSIIDLQVVLGKYHLSSTPGIENKDGSDTQ+EDKASDQKKILEQENTAAGILCQLRT
Sbjct: 61  KLVDSIIDLQVVLGKYHLSSTPGIENKDGSDTQSEDKASDQKKILEQENTAAGILCQLRT 120

Query: 121 NPKMLASDPTLIDDVLGVVAELGKVDDSSLGSLLSEYLGKETMLAIVCKTYNGVKSLEKY 180
           NPKMLASDPTLIDDVLGVVAELGKVDDSSLGSLLSEYLGKETMLAIVCKTYNGVKSLEKY
Sbjct: 121 NPKMLASDPTLIDDVLGVVAELGKVDDSSLGSLLSEYLGKETMLAIVCKTYNGVKSLEKY 180

Query: 181 DKEGSINKTSGLHGFGASIGRTLEGRFNVISLETLRPYSGEFVAADPQRRLDLPKPRFPN 240
           DKEGSINKTSGLHGFGASIGRTLEGRFNVISLETLRPYSGEFVAADPQRRLDLPKPRFPN
Sbjct: 181 DKEGSINKTSGLHGFGASIGRTLEGRFNVISLETLRPYSGEFVAADPQRRLDLPKPRFPN 240

Query: 241 GDSPPGFLGYAVNMINIDTAHLYFLTASGYGLRETLFYSLFSCLQIYRTRVEMLQAVPCI 300
           GDSPPGFLGYAVNMINIDTAHLYFLTASGYGLRETLFYSLFSCLQIY+TR EMLQAVPCI
Sbjct: 241 GDSPPGFLGYAVNMINIDTAHLYFLTASGYGLRETLFYSLFSCLQIYKTRAEMLQAVPCI 300

Query: 301 TDGALSLDGGIIKRSGLFYLGNRDDVKVSFSKSSTNSSLPDHYIESERQMKEMKWRKEKM 360
           TDGALSLDGGIIKRSGLFYLGNRDDVKVSFSKSSTNSSLPDHYIESERQMKEMKWRKEKM
Sbjct: 301 TDGALSLDGGIIKRSGLFYLGNRDDVKVSFSKSSTNSSLPDHYIESERQMKEMKWRKEKM 360

Query: 361 LEDITREQAMLDSTRLNFERKKADFVKFIAETATR 396
           LEDITREQAMLDSTRLNFERKKADFVKFIAETATR
Sbjct: 361 LEDITREQAMLDSTRLNFERKKADFVKFIAETATR 395

[Close]

BLAST of MS000499.1 vs. ExPASy TrEMBL
Match: A0A6J1JC57 (protein DEFECTIVE IN MERISTEM SILENCING 3-like OS=Cucurbita maxima OX=3661 GN=LOC111483128 PE=4 SV=1)

HSP 1 Score: 659.1 bits (1699), Expect = 1.2e-185
Identity = 328/395 (83.04%), Postives = 361/395 (91.39%), Query Frame = 0


Query: 1   MKLDQIDKLKVLKNELQDGGLSPADPIDVCSKRLQDDLQTLGMKIQLHEDNIRFLKTLKD 60
           MKLD+IDK +V K+E+QDGGLS  DP ++ SK+LQDDLQTLG K+QLHEDNIRFL+TLKD
Sbjct: 1   MKLDEIDKCRVPKDEMQDGGLSHEDPTNLRSKKLQDDLQTLGTKLQLHEDNIRFLRTLKD 60

Query: 61  KLVDSIIDLQVVLGKYHLSSTPGIENKDGSDTQNEDKASDQKKILEQENTAAGILCQLRT 120
           K VDSIIDLQV LGKYH SSTP IE +DG+DTQ+EDK SDQK+IL+QEN+AA ILCQL+T
Sbjct: 61  KFVDSIIDLQVTLGKYHASSTPKIETQDGADTQSEDKPSDQKQILQQENSAASILCQLKT 120

Query: 121 NPKMLASDPTLIDDVLGVVAELGKVDDSSLGSLLSEYLGKETMLAIVCKTYNGVKSLEKY 180
           NPKMLASDPTL DDVLGVVAELGKVDDS L SLLSEYLG ETMLAIVCKTYNGVKSLEKY
Sbjct: 121 NPKMLASDPTLSDDVLGVVAELGKVDDSVLSSLLSEYLGTETMLAIVCKTYNGVKSLEKY 180

Query: 181 DKEGSINKTSGLHGFGASIGRTLEGRFNVISLETLRPYSGEFVAADPQRRLDLPKPRFPN 240
           DKEG INKTSGLHGFG S+G+TLEGRFNVISLETLRPY+G FVA DPQ+RLD+P PR PN
Sbjct: 181 DKEGCINKTSGLHGFGTSLGKTLEGRFNVISLETLRPYAGNFVANDPQKRLDIPNPRLPN 240

Query: 241 GDSPPGFLGYAVNMINIDTAHLYFLTASGYGLRETLFYSLFSCLQIYRTRVEMLQAVPCI 300
           GD PPGF+GYAVNMINID  +L+FLTASGYGLRETLFYSLFSCLQIY+TR EMLQAVPCI
Sbjct: 241 GDCPPGFIGYAVNMINIDRTYLFFLTASGYGLRETLFYSLFSCLQIYKTRTEMLQAVPCI 300

Query: 301 TDGALSLDGGIIKRSGLFYLGNRDDVKVSFSKSSTNSSLPDHYIESERQMKEMKWRKEKM 360
           TDGALSLDGGIIKRSGLF LGNRDDVKV FSK+STNSSLPDHY ESERQMKEMKW+KEK+
Sbjct: 301 TDGALSLDGGIIKRSGLFCLGNRDDVKVRFSKTSTNSSLPDHYTESERQMKEMKWKKEKI 360

Query: 361 LEDITREQAMLDSTRLNFERKKADFVKFIAETATR 396
           LED+ REQA+LDSTRLNFERKK +FV+F+AETA R
Sbjct: 361 LEDMRREQALLDSTRLNFERKKVEFVQFLAETAAR 395

[Close]

BLAST of MS000499.1 vs. ExPASy TrEMBL
Match: A0A6J1E8G6 (protein DEFECTIVE IN MERISTEM SILENCING 3-like OS=Cucurbita moschata OX=3662 GN=LOC111430834 PE=4 SV=1)

HSP 1 Score: 654.4 bits (1687), Expect = 2.9e-184
Identity = 325/395 (82.28%), Postives = 362/395 (91.65%), Query Frame = 0


Query: 1   MKLDQIDKLKVLKNELQDGGLSPADPIDVCSKRLQDDLQTLGMKIQLHEDNIRFLKTLKD 60
           MKLD+IDK +V K+E+Q+GGLS  DP ++ SK+LQDDLQTLG K+QLHEDNIRFL+TLKD
Sbjct: 1   MKLDEIDKCRVPKDEMQEGGLSHEDPTNLRSKKLQDDLQTLGTKLQLHEDNIRFLRTLKD 60

Query: 61  KLVDSIIDLQVVLGKYHLSSTPGIENKDGSDTQNEDKASDQKKILEQENTAAGILCQLRT 120
           KLVDSIIDLQV LGKYH SSTP IE +DG+DTQ+EDK SDQK+IL++EN+AA ILCQL+T
Sbjct: 61  KLVDSIIDLQVTLGKYHASSTPKIETQDGADTQSEDKLSDQKQILQEENSAASILCQLKT 120

Query: 121 NPKMLASDPTLIDDVLGVVAELGKVDDSSLGSLLSEYLGKETMLAIVCKTYNGVKSLEKY 180
           NPKMLASDPTL DDVLGVVAELGKVDDS L SLLSEYLG ETMLAIVCKTYNGVKSLEKY
Sbjct: 121 NPKMLASDPTLSDDVLGVVAELGKVDDSVLSSLLSEYLGTETMLAIVCKTYNGVKSLEKY 180

Query: 181 DKEGSINKTSGLHGFGASIGRTLEGRFNVISLETLRPYSGEFVAADPQRRLDLPKPRFPN 240
           DKEG INKTSGLHGFG S+G+TLEGRFNVISLETLRPY+G+FVA DPQ+RLD+P PR PN
Sbjct: 181 DKEGCINKTSGLHGFGTSLGKTLEGRFNVISLETLRPYAGDFVANDPQKRLDIPNPRLPN 240

Query: 241 GDSPPGFLGYAVNMINIDTAHLYFLTASGYGLRETLFYSLFSCLQIYRTRVEMLQAVPCI 300
           GD P GF+GYAVNMINID  +L+FLTASGYGLRETLFYSLFSCLQIY+TR EMLQAVPCI
Sbjct: 241 GDCPAGFIGYAVNMINIDRTYLFFLTASGYGLRETLFYSLFSCLQIYKTRTEMLQAVPCI 300

Query: 301 TDGALSLDGGIIKRSGLFYLGNRDDVKVSFSKSSTNSSLPDHYIESERQMKEMKWRKEKM 360
           TDGALSLDGGIIKRSGLF LGNRDDVKV FSK+STNSSLPDHY ESERQMKEMKW+KEK+
Sbjct: 301 TDGALSLDGGIIKRSGLFCLGNRDDVKVRFSKTSTNSSLPDHYTESERQMKEMKWKKEKI 360

Query: 361 LEDITREQAMLDSTRLNFERKKADFVKFIAETATR 396
           LED+ REQA+LDSTRLNFERK+ +FV+F+AETA R
Sbjct: 361 LEDMRREQALLDSTRLNFERKRVEFVQFLAETAAR 395

[Close]

BLAST of MS000499.1 vs. ExPASy TrEMBL
Match: A0A5D3DZ76 (Protein DEFECTIVE IN MERISTEM SILENCING 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G003790 PE=4 SV=1)

HSP 1 Score: 638.3 bits (1645), Expect = 2.2e-179
Identity = 318/395 (80.51%), Postives = 356/395 (90.13%), Query Frame = 0


Query: 1   MKLDQIDKLKVLKNELQDGGLSPADPIDVCSKRLQDDLQTLGMKIQLHEDNIRFLKTLKD 60
           MKL++ D  KV K+E+QD  LS  DPI++ SK+LQDDLQT+GMKIQLHEDNIRFL+TLKD
Sbjct: 1   MKLEEFDNFKVPKDEMQDVELSHEDPINLHSKKLQDDLQTMGMKIQLHEDNIRFLRTLKD 60

Query: 61  KLVDSIIDLQVVLGKYHLSSTPGIENKDGSDTQNEDKASDQKKILEQENTAAGILCQLRT 120
           KLVDSIIDLQV+LGKYH S++P IENKDGSDTQ+EDK S QK IL+QEN+AA ILC L+T
Sbjct: 61  KLVDSIIDLQVILGKYHASNSPKIENKDGSDTQSEDKPSYQKAILQQENSAASILCHLKT 120

Query: 121 NPKMLASDPTLIDDVLGVVAELGKVDDSSLGSLLSEYLGKETMLAIVCKTYNGVKSLEKY 180
           NPKMLASDPTL +DVLGVVAELG V+D +LGSLLSEYLG ETM AIVCKTYNGVKSLEKY
Sbjct: 121 NPKMLASDPTLSEDVLGVVAELGHVEDDTLGSLLSEYLGTETMSAIVCKTYNGVKSLEKY 180

Query: 181 DKEGSINKTSGLHGFGASIGRTLEGRFNVISLETLRPYSGEFVAADPQRRLDLPKPRFPN 240
           D +G INKTSGLHGFG S+G+TLEGRFNVISLETLRPYSGEFVA DPQRRLD+PKPR PN
Sbjct: 181 DTDGGINKTSGLHGFGTSLGKTLEGRFNVISLETLRPYSGEFVADDPQRRLDIPKPRLPN 240

Query: 241 GDSPPGFLGYAVNMINIDTAHLYFLTASGYGLRETLFYSLFSCLQIYRTRVEMLQAVPCI 300
           GD P GFLGYAVNMINID  HL+FLTASGYGLRETLFYSLF CLQIY+TR EMLQAVPCI
Sbjct: 241 GDCPAGFLGYAVNMINIDRTHLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPCI 300

Query: 301 TDGALSLDGGIIKRSGLFYLGNRDDVKVSFSKSSTNSSLPDHYIESERQMKEMKWRKEKM 360
           TDGALSLDGGIIKRSGLF LGNR D+K +FSK+STNSSLPDHY+ESERQMKEMKW+KEKM
Sbjct: 301 TDGALSLDGGIIKRSGLFCLGNRGDMKATFSKTSTNSSLPDHYMESERQMKEMKWKKEKM 360

Query: 361 LEDITREQAMLDSTRLNFERKKADFVKFIAETATR 396
           LED+ RE+A+LDS +LNFE+KKA+FV+F+AE A R
Sbjct: 361 LEDMRRERALLDSLKLNFEKKKAEFVQFLAEAAAR 395

[Close]

BLAST of MS000499.1 vs. ExPASy TrEMBL
Match: E5GBA2 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 635.2 bits (1637), Expect = 1.8e-178
Identity = 316/395 (80.00%), Postives = 355/395 (89.87%), Query Frame = 0


Query: 1   MKLDQIDKLKVLKNELQDGGLSPADPIDVCSKRLQDDLQTLGMKIQLHEDNIRFLKTLKD 60
           MKL++ D  KV K+E+QD  LS  DPI++ SK+LQDDLQT+GMKIQLHEDNIRFL+TLKD
Sbjct: 1   MKLEEFDNFKVPKDEMQDVELSHEDPINLHSKKLQDDLQTMGMKIQLHEDNIRFLRTLKD 60

Query: 61  KLVDSIIDLQVVLGKYHLSSTPGIENKDGSDTQNEDKASDQKKILEQENTAAGILCQLRT 120
           KLVDSIIDLQV+LGKYH S++P IENKDGSDTQ+EDK S QK IL+QEN+AA ILC L+T
Sbjct: 61  KLVDSIIDLQVILGKYHASNSPKIENKDGSDTQSEDKPSYQKAILQQENSAASILCHLKT 120

Query: 121 NPKMLASDPTLIDDVLGVVAELGKVDDSSLGSLLSEYLGKETMLAIVCKTYNGVKSLEKY 180
           NPKMLASDPT+ +DVLGVVAELG V+D +L SLLSEYLG ETM AIVCKTYNGVKSLEKY
Sbjct: 121 NPKMLASDPTMSEDVLGVVAELGHVEDDTLSSLLSEYLGTETMSAIVCKTYNGVKSLEKY 180

Query: 181 DKEGSINKTSGLHGFGASIGRTLEGRFNVISLETLRPYSGEFVAADPQRRLDLPKPRFPN 240
           D +G INKTSGLHGFG S+G+TLEGRFNVISLETLRPYSGEFVA DPQRRLD+PKPR PN
Sbjct: 181 DTDGGINKTSGLHGFGTSLGKTLEGRFNVISLETLRPYSGEFVADDPQRRLDIPKPRLPN 240

Query: 241 GDSPPGFLGYAVNMINIDTAHLYFLTASGYGLRETLFYSLFSCLQIYRTRVEMLQAVPCI 300
           GD P GFLGYAVNMINID  HL+FLTASGYGLRETLFYSLF CLQIY+TR EMLQAVPCI
Sbjct: 241 GDCPAGFLGYAVNMINIDRTHLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPCI 300

Query: 301 TDGALSLDGGIIKRSGLFYLGNRDDVKVSFSKSSTNSSLPDHYIESERQMKEMKWRKEKM 360
           TDGALSLDGGIIKRSGLF LGNR D+K +FSK+STNSSLPDHY+ESERQMKEMKW+KEKM
Sbjct: 301 TDGALSLDGGIIKRSGLFCLGNRGDMKATFSKTSTNSSLPDHYMESERQMKEMKWKKEKM 360

Query: 361 LEDITREQAMLDSTRLNFERKKADFVKFIAETATR 396
           LED+ RE+A+LDS +LNFE+KKA+FV+F+AE A R
Sbjct: 361 LEDMRRERALLDSLKLNFEKKKAEFVQFLAEAAAR 395

[Close]

BLAST of MS000499.1 vs. TAIR 10
Match: AT3G49250.1 (defective in meristem silencing 3 )

HSP 1 Score: 380.6 bits (976), Expect = 1.6e-105
Identity = 202/394 (51.27%), Postives = 281/394 (71.32%), Query Frame = 0


Query: 1   MKLDQIDKLKVLKNELQD-GGLSPADPIDVCSKRLQDDLQTLGMKIQLHEDNIRFLKTLK 60
           M LDQ     V +NE Q+ GG++ A+     SKRL+ DL+ +G KI+ HEDN++FLK+ K
Sbjct: 24  MNLDQ--SSPVARNETQNGGGIAHAEFAMFNSKRLESDLEAMGNKIKQHEDNLKFLKSQK 83

Query: 61  DKLVDSIIDLQVVLGKYHLSSTPGIENKDGSDTQNEDKASDQKKILEQENTAAGILCQLR 120
           +K+ ++I+DLQV + K + S TP  EN D S  Q ED      +IL  EN+AAG+L  + 
Sbjct: 84  NKMDEAIVDLQVHMSKLNSSPTPRSENSDNS-LQGED---INAQILRHENSAAGVLSLVE 143

Query: 121 TNPKMLASDPTLIDDVLGVVAELGKVDDSSLGSLLSEYLGKETMLAIVCKTYNGVKSLEK 180
           T     AS   L   V+GVVA+LGKV+D +L  +LS YLG  +MLA+VC+ Y  V +LE 
Sbjct: 144 TLHGAQASQLMLTKGVVGVVAKLGKVNDENLSQILSNYLGTRSMLAVVCRNYESVTALEA 203

Query: 181 YDKEGSINKTSGLHGFGASIGRTLEGRFNVISLETLRPYSGEFVAADPQRRLDLPKPRFP 240
           YD  G+I+  +GLH  G+SIGR +   F+ I LE LRPY G+ +A D QRRLDL KP+ P
Sbjct: 204 YDNHGNIDINAGLHCLGSSIGREIGDSFDAICLENLRPYVGQHIADDLQRRLDLLKPKLP 263

Query: 241 NGDSPPGFLGYAVNMINIDTAHLYFLTASGYGLRETLFYSLFSCLQIYRTRVEMLQAVPC 300
           NG+ PPGFLG+AVNMI ID A+L  +T+ GYGLRETLFY+LFS LQ+Y+TR +M+ A+PC
Sbjct: 264 NGECPPGFLGFAVNMIQIDPAYLLCVTSYGYGLRETLFYNLFSRLQVYKTRADMISALPC 323

Query: 301 ITDGALSLDGGIIKRSGLFYLGNRDDVKVSFSKSSTNSSLPDHYIESERQMKEMKWRKEK 360
           I+DGA+SLDGGII+++G+F LGNRD+V V F+K + + ++ D+Y E+E++MKE+KW+KEK
Sbjct: 324 ISDGAVSLDGGIIRKTGIFNLGNRDEVNVRFAKPTASRTM-DNYSEAEKKMKELKWKKEK 383

Query: 361 MLEDITREQAMLDSTRLNFERKKADFVKFIAETA 394
            LEDI REQ + +    NF +KK +FV+ +A+++
Sbjct: 384 TLEDIKREQVLREHAVFNFGKKKEEFVRCLAQSS 410

[Close]

BLAST of MS000499.1 vs. TAIR 10
Match: AT5G24280.1 (gamma-irradiation and mitomycin c induced 1 )

HSP 1 Score: 158.3 bits (399), Expect = 1.3e-38
Identity = 97/227 (42.73%), Postives = 129/227 (56.83%), Query Frame = 0


Query: 97   KASDQKKILEQ-ENTAAGILCQLRTNPKMLASDPTLIDDVLGVVAELGKVDDSSLGSLLS 156
            K S  K+I E+  +TAA + C L        S       + GVVA LG V  +SL  +LS
Sbjct: 1314 KESMMKQIEEKHHDTAASVFCCLYRKAPPPRSLFLSQKGMFGVVALLGSVASTSLSRVLS 1373

Query: 157  EYLGKETMLAIVCKTYNGVKSLEKYDKEGSINKTSGLHGFGASIGRTLEGRFNVISLETL 216
            EYLGK+TML++VCK+       ++Y K              AS+GR++  RF VI L+  
Sbjct: 1374 EYLGKDTMLSLVCKSSQFGPKSDEYRK---------FQSEAASLGRSITNRFLVICLDAT 1433

Query: 217  RPYSGEFVAADPQRRLDLPKPRFPNGDSPPGFLGYAVNMINIDTAHLYFLTASGYGLRET 276
            RP+    V  DPQ+RL +  P  PNGD  PGF GYAVNMI++ +  L   ++SGYGLRET
Sbjct: 1434 RPWRNGLVRNDPQKRLAMDNPYLPNGDPIPGFKGYAVNMIDLASEELDIQSSSGYGLRET 1493

Query: 277  LFYSLFSCLQIYRTRVEMLQAVPCITDG-ALSLDGGIIKRSGLFYLG 322
            LFY +F  LQ+Y T   +  A+P I  G A+SLDG I + +G  Y G
Sbjct: 1494 LFYGVFRELQVYETAEHLEAALPHINGGDAVSLDGVIARENGFIYSG 1531

The following BLAST results are available for this feature:

BLAST of MS000499.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141241.1	3.4e-219	99.24	protein DEFECTIVE IN MERISTEM SILENCING 3-like [Momordica charantia] >XP_0221412...	[more]
XP_022985034.1	2.5e-185	83.04	protein DEFECTIVE IN MERISTEM SILENCING 3-like [Cucurbita maxima]	[more]
XP_022923033.1	6.1e-184	82.28	protein DEFECTIVE IN MERISTEM SILENCING 3-like [Cucurbita moschata]	[more]
KAG6576650.1	7.9e-184	82.28	Protein DEFECTIVE IN MERISTEM SILENCING 3, partial [Cucurbita argyrosperma subsp...	[more]
XP_023551720.1	1.4e-183	82.28	protein DEFECTIVE IN MERISTEM SILENCING 3-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS000499.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94A79	2.2e-104	51.27	Protein DEFECTIVE IN MERISTEM SILENCING 3 OS=Arabidopsis thaliana OX=3702 GN=DMS...	[more]
F4KFS5	1.8e-37	42.73	Structural maintenance of chromosomes flexible hinge domain-containing protein G...	[more]

BLAST of MS000499.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CIJ2	1.6e-219	99.24	protein DEFECTIVE IN MERISTEM SILENCING 3-like OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1JC57	1.2e-185	83.04	protein DEFECTIVE IN MERISTEM SILENCING 3-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1E8G6	2.9e-184	82.28	protein DEFECTIVE IN MERISTEM SILENCING 3-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A5D3DZ76	2.2e-179	80.51	Protein DEFECTIVE IN MERISTEM SILENCING 3 OS=Cucumis melo var. makuwa OX=1194695...	[more]
E5GBA2	1.8e-178	80.00	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

BLAST of MS000499.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49250.1	1.6e-105	51.27	defective in meristem silencing 3	[more]
AT5G24280.1	1.3e-38	42.73	gamma-irradiation and mitomycin c induced 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33566:SF6	PROTEIN DEFECTIVE IN MERISTEM SILENCING 3	coord: 27..393
None	No IPR available	PANTHER	PTHR33566	EN/SPM-LIKE TRANSPOSON-RELATED	coord: 27..393

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS000499	MS000499	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS000499.1-cds	MS000499.1-cds-scaffold44:2115611..2115830	CDS
MS000499.1-cds	MS000499.1-cds-scaffold44:2115962..2116282	CDS
MS000499.1-cds	MS000499.1-cds-scaffold44:2116401..2116592	CDS
MS000499.1-cds	MS000499.1-cds-scaffold44:2117372..2117615	CDS
MS000499.1-cds	MS000499.1-cds-scaffold44:2117710..2117824	CDS
MS000499.1-cds	MS000499.1-cds-scaffold44:2117941..2118036	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS000499.1	MS000499.1-protein	polypeptide