MS000401.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS000401.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Remorin-like
Location	scaffold44: 1451340 .. 1451722 (-)
Sequence length	294
RNA-Seq Expression	MS000401.1
Synteny	MS000401.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGATGAGAGCTGAACGGAAAATAGCTTCCACTGAAGCATGGGAGAGCTCCAAGCAAGCTCCTCTTAAAGCTAAAGAAAAGAAGATTATTGAGGTTTTTTTTTTTCTTTTTGTGGGTGTGCTTTAATTTTCATTTTATATATCATAAATTTTGAAAAAAAAAATTCATATAGGAAATTAAAGGCAGAAGTGTCCGGCAAGATGAAGTTGAAGGAGATTGAGAAGGTAAGAGACAAAGAGTTAGACACACATATAGCAGCGGAATCAAAAAAAGCAATTATTGAGATTGAGAGAAATCATCAAAAACAGAAGATTGAGGAGAAAGCTGCCAAACATCGGTCTACCAATTCTGTTCCATCCAAGTGTTTTGGTATTTTCAAAGAC

mRNA sequence

TTGATGAGAGCTGAACGGAAAATAGCTTCCACTGAAGCATGGGAGAGCTCCAAGCAAGCTCCTCTTAAAGCTAAAGAAAAGAAGATTATTGAGGCAGAAGTGTCCGGCAAGATGAAGTTGAAGGAGATTGAGAAGGTAAGAGACAAAGAGTTAGACACACATATAGCAGCGGAATCAAAAAAAGCAATTATTGAGATTGAGAGAAATCATCAAAAACAGAAGATTGAGGAGAAAGCTGCCAAACATCGGTCTACCAATTCTGTTCCATCCAAGTGTTTTGGTATTTTCAAAGAC

Coding sequence (CDS)

TTGATGAGAGCTGAACGGAAAATAGCTTCCACTGAAGCATGGGAGAGCTCCAAGCAAGCTCCTCTTAAAGCTAAAGAAAAGAAGATTATTGAGGCAGAAGTGTCCGGCAAGATGAAGTTGAAGGAGATTGAGAAGGTAAGAGACAAAGAGTTAGACACACATATAGCAGCGGAATCAAAAAAAGCAATTATTGAGATTGAGAGAAATCATCAAAAACAGAAGATTGAGGAGAAAGCTGCCAAACATCGGTCTACCAATTCTGTTCCATCCAAGTGTTTTGGTATTTTCAAAGAC

Protein sequence

LMRAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIFKD

Homology

[Close]

BLAST of MS000401.1 vs. NCBI nr
Match: KGN57373.1 (hypothetical protein Csa_010046 [Cucumis sativus])

HSP 1 Score: 90.1 bits (222), Expect = 1.1e-14
Identity = 53/96 (55.21%), Postives = 75/96 (78.12%), Query Frame = 0


Query: 3   RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKA 62
           +AER++ASTEAW++SK+A L+A+ KK I+A++  K++L+ +EKV++KE +TH A ESKKA
Sbjct: 33  KAERRLASTEAWKNSKKAALEAEVKK-IDADLV-KLRLRGMEKVKNKEAETHKAVESKKA 92

Query: 63  IIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIFKD 99
            IE +R  +K K+E KA  HR TN+VP KCFGI  D
Sbjct: 93  SIEAKRELKKLKVEGKAKVHRCTNTVPKKCFGICND 126

[Close]

BLAST of MS000401.1 vs. NCBI nr
Match: KAA0033641.1 (remorin-like [Cucumis melo var. makuwa] >TYK22940.1 remorin-like [Cucumis melo var. makuwa])

HSP 1 Score: 71.6 bits (174), Expect = 4.2e-09
Identity = 36/62 (58.06%), Postives = 48/62 (77.42%), Query Frame = 0


Query: 37 KMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF 96
          K++LKE+EKV++KE +TH A ESKKA IE +R  +K K+E++A  HR TN+VP KCFGI 
Sbjct: 11 KLRLKEMEKVKNKEAETHKAVESKKASIEAKRELRKLKVEDRAKMHRCTNTVPKKCFGIC 70

Query: 97 KD 99
           D
Sbjct: 71 ND 72

[Close]

BLAST of MS000401.1 vs. NCBI nr
Match: KAF5732350.1 (Remorin family protein [Tripterygium wilfordii])

HSP 1 Score: 69.7 bits (169), Expect = 1.6e-08
Identity = 42/93 (45.16%), Postives = 64/93 (68.82%), Query Frame = 0


Query: 3  RAERKIASTEAWESSKQAPLKAKEKKI-IEAEVSGKMKLKEIEKVRDKELDTHIAAESKK 62
          RA+R++A TEAWE  K+A L+AK K+I IEAE    +K K++E++++KE       + +K
Sbjct: 8  RAQRRLADTEAWEKKKKASLEAKHKQIEIEAE---NLKHKKLEQLKNKEAGAQKTIQEEK 67

Query: 63 AIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFG 95
          A IE +R     K+E+KA+K+R++NS P K FG
Sbjct: 68 AAIEAQREKSTMKVEDKASKYRASNSFPKKFFG 97

[Close]

BLAST of MS000401.1 vs. NCBI nr
Match: XP_022867512.1 (remorin-like [Olea europaea var. sylvestris] >CAA2997354.1 remorin-like [Olea europaea subsp. europaea])

HSP 1 Score: 68.2 bits (165), Expect = 4.6e-08
Identity = 44/94 (46.81%), Postives = 64/94 (68.09%), Query Frame = 0


Query: 3   RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKA 62
           +A++K++S EAWE+SK+A L+A+ KK IE E+  K K + +EK+++K    H AAE K+A
Sbjct: 103 KAQKKLSSIEAWENSKKASLEAELKK-IEEELE-KKKAEYVEKMKNKVALVHKAAEEKRA 162

Query: 63  IIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF 97
           IIE +R     K EE AAK+R+T + P K  G F
Sbjct: 163 IIEAKRGEDLLKAEEMAAKYRATGTAPKKLLGCF 194

[Close]

BLAST of MS000401.1 vs. NCBI nr
Match: XP_004140777.2 (remorin [Cucumis sativus])

HSP 1 Score: 68.2 bits (165), Expect = 4.6e-08
Identity = 42/94 (44.68%), Postives = 62/94 (65.96%), Query Frame = 0


Query: 3   RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKA 62
           RA +K+++  +WE+SK+A ++A+ K+I   E   K K + IEK+++K    H  AE KKA
Sbjct: 210 RAHKKLSAIGSWENSKKAAVEAELKQI--EEKFEKKKGEHIEKMKNKIASIHKKAEEKKA 269

Query: 63  IIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF 97
           +IE +R  +K K EE AAKHR+T + P K FG F
Sbjct: 270 VIEAKRGEEKLKAEEIAAKHRATGTAPKKIFGCF 301

[Close]

BLAST of MS000401.1 vs. ExPASy Swiss-Prot
Match: P93788 (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.1e-08
Identity = 39/94 (41.49%), Postives = 60/94 (63.83%), Query Frame = 0


Query: 3   RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKA 62
           +A++K+++  AWE+SK+A L+A+ KK+   E   K K +  EK+++K    H  AE K+A
Sbjct: 107 KAQKKVSAIGAWENSKKANLEAELKKM--EEQLEKKKAEYTEKMKNKIALLHKEAEEKRA 166

Query: 63  IIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF 97
           +IE +R     K EE AAK+R+T + P K  GIF
Sbjct: 167 MIEAKRGEDLLKAEELAAKYRATGTAPKKILGIF 198

[Close]

BLAST of MS000401.1 vs. ExPASy Swiss-Prot
Match: Q9FFA5 (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.8e-08
Identity = 36/92 (39.13%), Postives = 61/92 (66.30%), Query Frame = 0


Query: 3   RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKA 62
           +AE+K++S  +WE++K+A ++A+ KK+   E   K K + +E++++K    H  AE K+A
Sbjct: 111 KAEKKLSSIGSWENNKKAAVEAELKKM--EEQLEKKKAEYVEQMKNKIAQIHKEAEEKRA 170

Query: 63  IIEIERNHQKQKIEEKAAKHRSTNSVPSKCFG 95
           +IE +R  +  K EE AAK+R+T + P K FG
Sbjct: 171 MIEAKRGEEILKAEELAAKYRATGTAPKKLFG 200

[Close]

BLAST of MS000401.1 vs. ExPASy Swiss-Prot
Match: Q9M2D8 (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 6.2e-08
Identity = 39/94 (41.49%), Postives = 57/94 (60.64%), Query Frame = 0


Query: 3   RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKA 62
           +AE+KIA   AWE+SK+A ++A+ KKI   E   K K +  E++++K    H  AE ++A
Sbjct: 121 KAEKKIADVHAWENSKKAAVEAQLKKI--EEQLEKKKAEYAERMKNKVAAIHKEAEERRA 180

Query: 63  IIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF 97
           +IE +R     K EE AAK+R+T  VP    G F
Sbjct: 181 MIEAKRGEDVLKAEETAAKYRATGIVPKATCGCF 212

[Close]

BLAST of MS000401.1 vs. ExPASy Swiss-Prot
Match: O80837 (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 6.9e-07
Identity = 36/94 (38.30%), Postives = 57/94 (60.64%), Query Frame = 0


Query: 3   RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKA 62
           RA++KI+   AWE+SK+A ++A+ +KI   E   K K +  EK+++K    H  AE K+A
Sbjct: 99  RAQKKISDVHAWENSKKAAVEAQLRKI--EEKLEKKKAQYGEKMKNKVAAIHKLAEEKRA 158

Query: 63  IIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF 97
           ++E ++  +  K EE  AK+R+T  VP    G F
Sbjct: 159 MVEAKKGEELLKAEEMGAKYRATGVVPKATCGCF 190

[Close]

BLAST of MS000401.1 vs. ExPASy TrEMBL
Match: A0A0A0L6I9 (Remorin_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G182090 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 5.5e-15
Identity = 53/96 (55.21%), Postives = 75/96 (78.12%), Query Frame = 0


Query: 3   RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKA 62
           +AER++ASTEAW++SK+A L+A+ KK I+A++  K++L+ +EKV++KE +TH A ESKKA
Sbjct: 33  KAERRLASTEAWKNSKKAALEAEVKK-IDADLV-KLRLRGMEKVKNKEAETHKAVESKKA 92

Query: 63  IIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIFKD 99
            IE +R  +K K+E KA  HR TN+VP KCFGI  D
Sbjct: 93  SIEAKRELKKLKVEGKAKVHRCTNTVPKKCFGICND 126

[Close]

BLAST of MS000401.1 vs. ExPASy TrEMBL
Match: A0A5D3DHT0 (Remorin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00180 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.0e-09
Identity = 36/62 (58.06%), Postives = 48/62 (77.42%), Query Frame = 0


Query: 37 KMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF 96
          K++LKE+EKV++KE +TH A ESKKA IE +R  +K K+E++A  HR TN+VP KCFGI 
Sbjct: 11 KLRLKEMEKVKNKEAETHKAVESKKASIEAKRELRKLKVEDRAKMHRCTNTVPKKCFGIC 70

Query: 97 KD 99
           D
Sbjct: 71 ND 72

[Close]

BLAST of MS000401.1 vs. ExPASy TrEMBL
Match: A0A7J7CE28 (Remorin family protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW18G01044 PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 7.7e-09
Identity = 42/93 (45.16%), Postives = 64/93 (68.82%), Query Frame = 0


Query: 3  RAERKIASTEAWESSKQAPLKAKEKKI-IEAEVSGKMKLKEIEKVRDKELDTHIAAESKK 62
          RA+R++A TEAWE  K+A L+AK K+I IEAE    +K K++E++++KE       + +K
Sbjct: 8  RAQRRLADTEAWEKKKKASLEAKHKQIEIEAE---NLKHKKLEQLKNKEAGAQKTIQEEK 67

Query: 63 AIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFG 95
          A IE +R     K+E+KA+K+R++NS P K FG
Sbjct: 68 AAIEAQREKSTMKVEDKASKYRASNSFPKKFFG 97

[Close]

BLAST of MS000401.1 vs. ExPASy TrEMBL
Match: A0A0A0L9S3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182080 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.2e-08
Identity = 42/94 (44.68%), Postives = 62/94 (65.96%), Query Frame = 0


Query: 3   RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKA 62
           RA +K+++  +WE+SK+A ++A+ K+I   E   K K + IEK+++K    H  AE KKA
Sbjct: 112 RAHKKLSAIGSWENSKKAAVEAELKQI--EEKFEKKKGEHIEKMKNKIASIHKKAEEKKA 171

Query: 63  IIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF 97
           +IE +R  +K K EE AAKHR+T + P K FG F
Sbjct: 172 VIEAKRGEEKLKAEEIAAKHRATGTAPKKIFGCF 203

[Close]

BLAST of MS000401.1 vs. ExPASy TrEMBL
Match: A0A7J7CAJ4 (Remorin OS=Tripterygium wilfordii OX=458696 GN=HS088_TW19G00758 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.9e-08
Identity = 44/94 (46.81%), Postives = 62/94 (65.96%), Query Frame = 0


Query: 3   RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKA 62
           +A +KI+S EAWE+SK+A ++A+ K+I   E   K K + +EK+++K    H AAE K+A
Sbjct: 126 KAHKKISSIEAWENSKKAAVEAELKQI--EENLEKKKAEYVEKMKNKIALIHKAAEEKRA 185

Query: 63  IIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF 97
           IIE +R     K EE AAKHR+T +VP K  G F
Sbjct: 186 IIEAKRGEDLLKAEEIAAKHRATGNVPKKIIGCF 217

[Close]

BLAST of MS000401.1 vs. TAIR 10
Match: AT3G48940.1 (Remorin family protein )

HSP 1 Score: 61.6 bits (148), Expect = 4.0e-10
Identity = 39/94 (41.49%), Postives = 59/94 (62.77%), Query Frame = 0


Query: 3   RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKA 62
           +A++KI+S  AWE+SK+A ++A+ KKI   E   K K    E++++K    H  AE K+A
Sbjct: 84  KAQKKISSVGAWENSKKASVEAELKKI--EEQLNKKKAHYTEQMKNKIAQIHKEAEEKRA 143

Query: 63  IIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF 97
           + E +R     K EE AAK+R+T + P+K FG F
Sbjct: 144 MTEAKRGEDVLKAEEMAAKYRATGTAPTKLFGFF 175

[Close]

BLAST of MS000401.1 vs. TAIR 10
Match: AT5G23750.1 (Remorin family protein )

HSP 1 Score: 58.5 bits (140), Expect = 3.4e-09
Identity = 36/92 (39.13%), Postives = 61/92 (66.30%), Query Frame = 0


Query: 3   RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKA 62
           +AE+K++S  +WE++K+A ++A+ KK+   E   K K + +E++++K    H  AE K+A
Sbjct: 111 KAEKKLSSIGSWENNKKAAVEAELKKM--EEQLEKKKAEYVEQMKNKIAQIHKEAEEKRA 170

Query: 63  IIEIERNHQKQKIEEKAAKHRSTNSVPSKCFG 95
           +IE +R  +  K EE AAK+R+T + P K FG
Sbjct: 171 MIEAKRGEEILKAEELAAKYRATGTAPKKLFG 200

[Close]

BLAST of MS000401.1 vs. TAIR 10
Match: AT5G23750.2 (Remorin family protein )

HSP 1 Score: 58.5 bits (140), Expect = 3.4e-09
Identity = 36/92 (39.13%), Postives = 61/92 (66.30%), Query Frame = 0


Query: 3   RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKA 62
           +AE+K++S  +WE++K+A ++A+ KK+   E   K K + +E++++K    H  AE K+A
Sbjct: 110 KAEKKLSSIGSWENNKKAAVEAELKKM--EEQLEKKKAEYVEQMKNKIAQIHKEAEEKRA 169

Query: 63  IIEIERNHQKQKIEEKAAKHRSTNSVPSKCFG 95
           +IE +R  +  K EE AAK+R+T + P K FG
Sbjct: 170 MIEAKRGEEILKAEELAAKYRATGTAPKKLFG 199

[Close]

BLAST of MS000401.1 vs. TAIR 10
Match: AT3G61260.1 (Remorin family protein )

HSP 1 Score: 58.2 bits (139), Expect = 4.4e-09
Identity = 39/94 (41.49%), Postives = 57/94 (60.64%), Query Frame = 0


Query: 3   RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKA 62
           +AE+KIA   AWE+SK+A ++A+ KKI   E   K K +  E++++K    H  AE ++A
Sbjct: 121 KAEKKIADVHAWENSKKAAVEAQLKKI--EEQLEKKKAEYAERMKNKVAAIHKEAEERRA 180

Query: 63  IIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF 97
           +IE +R     K EE AAK+R+T  VP    G F
Sbjct: 181 MIEAKRGEDVLKAEETAAKYRATGIVPKATCGCF 212

[Close]

BLAST of MS000401.1 vs. TAIR 10
Match: AT2G45820.1 (Remorin family protein )

HSP 1 Score: 54.7 bits (130), Expect = 4.9e-08
Identity = 36/94 (38.30%), Postives = 57/94 (60.64%), Query Frame = 0


Query: 3   RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKA 62
           RA++KI+   AWE+SK+A ++A+ +KI   E   K K +  EK+++K    H  AE K+A
Sbjct: 99  RAQKKISDVHAWENSKKAAVEAQLRKI--EEKLEKKKAQYGEKMKNKVAAIHKLAEEKRA 158

Query: 63  IIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF 97
           ++E ++  +  K EE  AK+R+T  VP    G F
Sbjct: 159 MVEAKKGEELLKAEEMGAKYRATGVVPKATCGCF 190

The following BLAST results are available for this feature:

BLAST of MS000401.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN57373.1	1.1e-14	55.21	hypothetical protein Csa_010046 [Cucumis sativus]	[more]
KAA0033641.1	4.2e-09	58.06	remorin-like [Cucumis melo var. makuwa] >TYK22940.1 remorin-like [Cucumis melo v...	[more]
KAF5732350.1	1.6e-08	45.16	Remorin family protein [Tripterygium wilfordii]	[more]
XP_022867512.1	4.6e-08	46.81	remorin-like [Olea europaea var. sylvestris] >CAA2997354.1 remorin-like [Olea eu...	[more]
XP_004140777.2	4.6e-08	44.68	remorin [Cucumis sativus]	[more]

BLAST of MS000401.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93788	2.1e-08	41.49	Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1	[more]
Q9FFA5	4.8e-08	39.13	Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1	[more]
Q9M2D8	6.2e-08	41.49	Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 P...	[more]
O80837	6.9e-07	38.30	Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1	[more]

BLAST of MS000401.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6I9	5.5e-15	55.21	Remorin_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G182090 P...	[more]
A0A5D3DHT0	2.0e-09	58.06	Remorin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00180 P...	[more]
A0A7J7CE28	7.7e-09	45.16	Remorin family protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW18G01044 P...	[more]
A0A0A0L9S3	2.2e-08	44.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182080 PE=3 SV=1	[more]
A0A7J7CAJ4	2.9e-08	46.81	Remorin OS=Tripterygium wilfordii OX=458696 GN=HS088_TW19G00758 PE=3 SV=1	[more]

BLAST of MS000401.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48940.1	4.0e-10	41.49	Remorin family protein	[more]
AT5G23750.1	3.4e-09	39.13	Remorin family protein	[more]
AT5G23750.2	3.4e-09	39.13	Remorin family protein	[more]
AT3G61260.1	4.4e-09	41.49	Remorin family protein	[more]
AT2G45820.1	4.9e-08	38.30	Remorin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 3..91 e-value: 9.9E-9 score: 35.0
None	No IPR available	PANTHER	PTHR31775:SF31	CARBOXY-TERMINAL REGION REMORIN	coord: 3..96
None	No IPR available	PANTHER	PTHR31775	OS02G0117200 PROTEIN	coord: 3..96

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS000401	MS000401	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS000401.1-cds	MS000401.1-cds-scaffold44:1451340..1451540	CDS
MS000401.1-cds	MS000401.1-cds-scaffold44:1451630..1451722	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS000401.1	MS000401.1-protein	polypeptide