MELO3C033713.1 (mRNA) Melon (DHL92) v4

Overview
NameMELO3C033713.1
TypemRNA
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionReactive Intermediate Deaminase A
Locationchr09: 4654595 .. 4662806 (-)
Sequence length816
RNA-Seq ExpressionMELO3C033713.1
SyntenyMELO3C033713.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGATAGAAAAGAGTGTGGTGTGACGGTTCCTAGAGTTCCAACAGAAGAGAGACATTGGTCTGTGGAGAGGAAGACGTTGGTTGTGTGTTTGCGGTGGGTTCTAACGTTTCTACGTTTATTGGAGTCGAGTTTAATCAACTTTCACGGGTTTAGCTGCAAGCTAGACGAAAATTCCAAAGTCTTCTGTCAGAAGAGCCAACAAGAAGAAAATTCAAATATAAAGACTTTGAAAGGTTTGAATGAGACGAGTTGGGAGCTCCAATAGTTTCTACAACTTATGGAATTTGATTTTGACGTGTTTATCATGCGTTGGGAGTTCAATTTTAATTATAGAGTATCTATAGTTTCTTAAATAATTGTATTTAGGATTCAATTTTTTCAATTAGGCAGGGATATTTAAGACATTATTCCAGCAATCAGTTTTTCATAATTTTTTTTATTTTACTATTTTATCAATTTAAATAAAAATTTATGATTTATAGAGAGTAAACCTTCTATTCTATTTTTGTTGTCTGCCCACGTACTTTCCTATTTAGTTAAACTCCTTACAAGTTTTGAGCCCAGCCCATAACACCAGCCTCAGCCCAACATTAGTATTAACATAATATTAAAATTTGTCCCCCAAGCTTCCCTTCATCCCCAAGTTGGAAATCAAATGCCCTAAAAACTCCCTTCATTTTTCTTCTGAAATTTCCTTCTATTTTCAACTCTCTCTCTCTCTCTCTCATCACCGAATTCCTCCTGCTTCGATCCACGCCCTGGCCGCCGGCTGCCTCTGTTCATCTCCTGCTTCAATTCGCACCATGATTTCAGGTAACTTCAATTTTTTCTCATTTCATTTCCCATCTTTTCCTTTTCTTCCATTTAGGTTACCTACCCCTCTGTGCTTTCTTCAATCCTCTGCCTTTTCTTCCTTCCATTCTTAGCTCGGAATCCTTCGGTTTTCCTCATTTCTTTGCCTCGGATTTATTTTATATTTTAATTCTTTGTTTTTGTCATTTCATATTATCAATGAAATTAATTGTGATGAACTATTTAGATTTATACGACAGCAACTTATCATCAATAACTCAATAATAACAACAACAGCTACAGAAAAAAGAACATCACTTTTATTTGTTCATTTGCAGGCATACAATCAAAATTGAAACATAGTTTTAGTCTTACAGACTTGTGTCACTATACTTTTGGAATAAAAAGGAAAAAGAGAATGCAATTCTGAAAAAAAAGGCAAGAAAAAACTCCGAACAAGCTTTATGCAATCAGCTCGACGAAAAGAGACGCCAGAACTGTAGTGGGATCTCCAAGAACGATACTAACAATGGTCTTGATGAAGACCTTTATGACTTTCCAATATTTGTTCCCTTTGCTGCCTTCCCCACGTCCTCGAGCTTTAATTGCTTTCAGAGTCACCTTCTCAAGGGCCAGTTGTATGTCCTGATTGGCATTATTGGCATTGATCCAGTCTCTTCCATTCTTGTGCCATTCCTCTAAAGCCATTTCAGTAACACAAGCCACATGAACAAGGTACTTCCCGCGCTTAGATATGTAGGACCAACCATTGCTTTTGACATGGGGATTGATGGTCTCCTTCTTGCACCACATGCACTCCCCCTCGACTTTGTTGGAGAGATTGAACTCCACGTTTTCAATTTTGTAATTCTTGTCGAGGTTTCGACAGCAGGGGTGGAGATCCAGCTCGTCTTTGTCTCTCTTGCAGTGGTACATAAAGCCATTGATTGTCTTTGTGCAGGCGTCGCAAAACTTTTTGCATTGGTCGTGGCAGGCCTTTGGTGGGGTTTTTAAGAACTCGAAGGCGGACTGTGGGAAGAATTCATGAAAAGTTGGCGAGTCTTGTGGAAACATACAAGCTTTGTGAAGATCAAAATTACACTCCTCGCATCGGTAGCGAGGCCCAAAGCCTATTTCCTTGCAGCCATCGCAGGTGTAAGGTTTGAGGTACTTCTTCAGCTGCAATTTATGCTTCAGTTTGTTTGGAGTACACAACTGGTTGGCCATTTTTTTTTCCTCTTGAAGCAAAGTAAAACACCAACGAAACAAGAGGTATAACGATGGATTGCAGGGTAGGGAAGAGTAGAGGAGAGATTTGTGAATATGGGGTTTGCTGGAAGAGTGGATAAGAGATTGGAAAGATTGAACACAGGAATAGCAGAGGTGAAGAGCTTTAAGAAGAATGCAGGAATGGTTATGGGGAATGTTGAATGGAGGCTGTGGGTTTTATATAAGAAATCTGAGGCCATGAGTTTTAGGTAATTTCTTCCGTCTTTGTTCTGAGAAGAAATGCATATAAGTTGTAAAGAAATTTCTAACTCTGGGTTTTGCTTATTCTCAATATTTTCTTTCTTCCTGGGTCCTTACAACTAAATACATTTGATTTTGAGGAGTTTGCTTATTCTCATTAGTTTATTGTTCTTTACATTGTATTTTCACGTCACTTGTGTCTAATATGATGGAATACACACAAATGGATATGCATATGATGTGAATTTGATAGAAATTTCTGTACTCTTGGGATTTTACTCGGTACATTTGTCTTCTCTGCTTTGTTAGTTTGTGTTTTAGTTCATTTAATATTCTAGTTTATTGCTAATCTGACACATTATTTAAACTTTTAGAGAAAATGTGTAAACTCTGTTGTTTGCGGAAGGTTTTGAGAAGGGCCAGCAGTTTCTCTACTATCAATTTTTTAATCTCGCTGTCTGTCGGGAGGTTTTTAGTTCTTTTTTTATTTCTTCTTTTTGTTCTTTTCCATTAAATGAATGAAGATTTTGCATTTGGTTTGCTGTGTACTTTCCCACAACTCTTGGAGCTTTGTTGACTGTTTTACCCCTTCTTCTAAGAGACAAAGATGGGATTTCTTGTATGATTCAATTGGAATTTCCAATTTCAAAAGTCAATGTCTTGCCTTTTGTTTTCCAATTAGTTAACGCTTAATTAAGCTTCTTATAAATAATATCAAATAATAATAATAATAATAATAATAATAATAATAATAATATAAAAGGTTTTAGTTTGGTATTTCTAAGAAATCCCTAGAGGACAAGACAGAAGCTTCTTCAAGGTTTGTGATCCCTCTTCTTTGATTATCTATTATGATGTCATTTGAAAGCAATATCTATCAGATTTAATTTTTCTTGCCAAGAATCTTTTTTTACAACAAAAATACTTTATAGTTTGTGTTTAGAATATGATTTTATGTCTTAAATTTGAGAGTGATTTAACATATAATATTTCTGCTTGTATTGTATTCAAAAAATCAAAATTAATTTTAGGGGCATATTCAAGTATGTATATATAAAATTAAACTATCTACAAATCATGTTCTCTAAAGTCCATTTATATGAATAATTTATGTCTTACATGTTTTTCTTTAAAATAAATTTTAAATTAATTAATTTCTTAGAAGTTTTTTTCATTATTTTTATTTATTTGTATTCTTTAAATTATATTGACCACAAACAAATAAAAATAATAAATTACTTAGTGATAATCGTAAATATAAGAATTAAATTTAAAATATTATCATTCACACTGACACATTATTATTTCTAAAATTACTATTCAAAACTTTCATAAATATAACAGGTAAAATATGTACAGCCTATGTAACAAAGTTTATATAGTTAGCATTTCTCTTTTATCATCTTTCTTCTTCGTCTTTCTTCACCTCTTCGTCTTTTTTATTTTTCTCCTTTTTTCCAAACTATTATTTGGTTTAAGATTGTGTATCAAATATAAAATACCTAAATATAAATATAAAAGATTTGAAAAGAACGTCGTTTAGATTTGGGCCAAATATAAACGACTGTATAAAAAAATAGTAAAATTTAAAAGATCGTGTATAAAGAATTTAAAAAAAATAATTTAGATTAAAGTAGCCAAATGTAAACAATTGTGTACCAAAAGAATTAAAAAAATTGTTTAGCCAAACGGTACCAAATTTTGAGCCAAATCTAAACACCAAATTTCGAAAAAAAAAAAATCATTTAGATTTGGGTTCAAATCTAAACAGTAGTTTAAACAAATTTAAACGTACCAAATATATTACGCCCGTGTTGTTAACAAAGCATTTTTTGTATTTTCTATGGTGGGCTTGCAGGCTTTTCTCGTTTTTTGAATTGTTCTATAAATATTTTGTTGCTTTGTTATATTTTTTAAAAAACCTCTTATTTGAATAAATCATCAAATGAAATATTTAGGTTTTAGCCGTTTGATATTTGGCTTTTTAGATTTTAATTTTTGAAAATGAAGTAACACTTAAAACTACCTCTAAATCTCTTGCTTGTTGTCTATTTTTAAAAAATATCAAATAGTGTTTAAAGACTTGTTTTTGAAATTTGGAATTCGGTGAAGATTTTTAGTCTTGAACTAAAAAAAACGCAAAGAAACTAAGGGAAAATAAACTTAATTTTTTAAAGAGTAAAAAATAAAAATAAAATGGTTACCTATTATCAAATGTAGTTTTAATGTATGTAAACGTTGTACAAACATTAAAAAAATGTGTGTAAATGATGTTGCATTCAAATTTACATAATACAAATACAATTATCTAATAAAACTAGGCTACTTGGCATGTATTGTCAAGATAGAAAAATTGGGATTACAAGTATAATGTGATTTTGATTTAGTAATGAGAAGTTACGAAAACTAACGAAAACATCCATCTTAAGAATTTATATCTTTAAGAAAATTACTCGAGGAAGATAATAACGATGATGATGATGATGAATGATGATGATAATAAGAGAAACTCAAAATAGTTATATTCATCAAGGGTTTAGGGATTTCTATCTCTAGTAATTTTATGTTATCTTCGAGAACCTTTAAAGGATTGTTAAACCCACTTTAACCATTTAACTAAATTGTCTATTTGTTATTTAGTAACCATATGTCCAAATCTATCTTGGAAAAAACAATTTCCAAGTACTAAACCTATATAGGTTTGTGTCCAACACTTGCTTCATTGTTTGGTAAACACAAATATATAAGAATGGAGTATAATAGCGAAATATCAAAATCTACATTCAACCTGTGTCCGTAATGAAATTCAGTGCAAGCTCCTAATCTCTCTAAATTTTTCCATAACCCACATGCCATAGAACATTACGAGGACAACATGAAACCTTCTTAGTTAGTTTTGATGACTTTGTACACCCCATTGCAATCTACGAAGTGGCCTTGCTTATAAGAATGTTTAACAATTTCAGTAGAACATTGATTGATATTAACCAACCAAGCGTTAAATTGTTAATTATATTTTATTTAATAATTGTAATGTAATTTAAATATTTCCGGTCTTATCATTTTTGACAACATTTAAGTAGGGTTAATTTAGTCTTTTCACAATGCACTAGTATTTTATTGGAAGGTTATGTAAGTTTTGCCTTTAGGTTGTTTCAAGTTAGTTTATGATAATTGAACTTTTAAGGTCTTTCTATCCGTAGAAAATCTTTAGATGACAAAACTTTTATCACCACATTTTTGTAATTCTTGATTCACGATTGCATGCCAAGAACATTAAGGTAAGTTTGATCATCTTACTTGTGGAGGGTTTGAACTTGGAGTAAGGAACTAGTTCTATTACATTAGATCTTACTAACGAAAATATTTAAAAAATGAAAGAATTTTTAAAAATAAGCTTTGGAAATGTATTTAATATCTAAATATCCCTAAAAATACATTCTAAATAATTGGTGTAATTTTGGTAGTCTAAAACCTCACGTCAGCCCAAAACTTTAAAAGGCTGTTTGGGCCCCAATTTATCACTGTGGGGTTGGATTTCCATAACCCTAACCCTTGTTTGCGGCCCAATTTATGGAAACCCTAAGACTAGGGTTTCCATAATCCTCCCAAATCCTTTTGACATTACTCATTCCCTCTCTACCTCTCTGTAATACCCTTGAAACTGTGGTAATCCTTCTCGACTTTTTATGCTTCCTTCCCTTCTACGTTCAATTTTGTCTTCTACCTCTTTCACTATCTTCATTTTCCCCTCCAAATCTTTCTGGTTTACTCTCTGATTCAATATCATCTCCGATGCTAAAAGCCATTTCGGTTTTCCCTCCCAACCTCAGAAGAAGATCTACTTCTCCACCGTCAGAGTACCCTTTCTATGTTGGCACCGTCACCGCCGCTTAGGTTTTTAAAGGAACTCGTTAGAACAACAAAAATAACAAAGAAGAAGAAGAAAAAGAAGAGATGGGGTTTGAGAATCTACAAAAGGGGGAGAAATTTATGTGAGATTGATGTGTTTTTTGTTTTTTTTTTTTGGATTTTTGTTTTTCAAATTTGGAAAACTAAAATCACTCTTTGATTATATCAAAACAGATGGAATTTTAGGGAAGAGGGTGACTAAATTTGTATCTTCTTCTTGTTCTTGACTTTTTTTTTTTTTTTTGCCCTTAATCTTTTGGGGTTTGATTTGATATATTAGATGATAAATAACATTAAAATTTTACTATATTTCATCAATTTACACTGATCTACTTCAAAATGACCTTTCTTAACAATCCGTACATCTTAACAATCTGTTTATAATTAAGTACCTTATGTAAGTTTTTATTTAATAAAATTCTTAATTGACATTTTCAGCTTTTCTTTGTGTATAGAAATTTGATTTCATTGTGGTTTTTTTTCTTTTCTTTTTTGTTTACAAAATTGTTTGGAAAGGGCTATAGAATTAGTTTATTTGAACCAACTCACAATTGTGTAATAAGAAATGCATAATTGTTAATTTTGGTGACTGTGAAAGTAATTTGGAAAAAATGGAAAGAGTGAAGTGAAAAAAAAAAACATAAAGTTGAATTTAACAAATGATATTGAGAATTTAATGAAAATTTAGATTAAAAATCTGAATGAGAGAGATTAAATTAAAACACAAGTTTCAATTTCAATAATAGGTTGTAAGTTTTGAAATTTATGGATAATGAAATAAATGTATAACATCAATAAAAAAAGATACATTCCTCTCGAATTAACAATAATGTGGTAATTAAAAAAATTCAAACAAATAATTTTTTTTTTAAAAAAAAGATTATTTAATAAAATAAAATTATAAAATTTGTGTATTAAATCTGCTTTTATATTTAAAAATAAATAAATTAGCCCTTCCCCAAACACATTTTGTTATATAACATACATTTTTTAACTATTGGTCGAAGTACGTAATAAAACTAAAACTAGAACCCCAACCTTTCCAAATCCAATCCTTCCCCAAACCACCTTAAGATTTAAATTTAGAATAAAATAATAATATATATATATATTATAATTGATCCTCAATCTTCCTTCCTCCCCAAGTTGGGAATCAAATGCCCTAAAACTCCTTTCTTCCATTTCTTCTGAAATTTCCTTCTCTTTTCAACCCTCTCTCTCTCATCACCGAATTTCTCCTGCTTTGATCGACGACGCCCTGTCCGCCGGCTGCCTCTGCCATCGGATTTTGGTTTTTACTTTAATCAACTCTGTTCATCTCCTGCTTCATTTCGCACCATGATTTCAGGTAACTTCAATTTTTTCTCATTTCATTTCCCATCTTTTCCTTTTCTTCCATTTAGGTCACCTAGTCCTCGTGCTTTGTTCAATCCTCTGCTTTTTCTTTGCCTCGGATTTTTTTTTTTAATTGTTCGTTTTTGTCATTTCGTATTATCAATGAAATTAATTATGATGAACTATTTCTCATTCAATATTTATATACGCGTTTCTGTGTTTGATCTCGCATTCTCTTTGATTGTATTTAAATTTATACCACAGCAACTTATCATCAATAACCCAATAATAACAACAGCTACAAAAATAAGAAAAAATCACTTTTATTTCTTCTTTGCAGGCATTCAATCAAAATTGAAACATAGTTTTAGTCTTACAGACTTGCTTCACTATACTTTTGGAACAAAAAGGAAAAAGAAAATGCAATTCAGAAAGAAAAGGCAAAACAAAAGTCGAACAAGCTTTATGCAATCAGCTCGACGAAAAGAGACGCCAGAACTGTAGTGGGATCTCCAAGAACGATACTGACAATGGTCTCGATGAAAACCTTTAGGATTCTCCAATATTTGTTCCCTTTTCCGCCATTCCCACGCCCTCGAGCTTTAATTGCTTTCAGATTAACCTTCTGAAGAGCCAGTTGTTCGTCCTGATTGGCATTATTAGCATTGATCCAGCCTCCTCCGTTCTTGTACCATTCCTCTAA

mRNA sequence

TGATAGAAAAGAGTGTGGTGTGACGGTTCCTAGAGTTCCAACAGAAGAGAGACATTGGTCTGTGGAGAGGAAGACGTTGGTTGTGTGTTTGCGGTGGGTTCTAACGTTTCTACGTTTATTGGAGTCGAGTTTAATCAACTTTCACGGGTTTAGCTGCAAGCTAGACGAAAATTCCAAAGTCTTCTGTCAGAAGAGCCAACAAGAAGAAAATTCAAATATAAAGACTTTGAAAGAGAGTAAACCTTCTATTCTATTTTTGTTGTCTGCCCACCTTCCCTTCATCCCCAAGTTGGAAATCAAATGCCCTAAAAACTCCCTTCATTTTTCTTCTGAAATTTCCTTCTATTTTCAACTCTCTCTCTCTCTCTCTCATCACCGAATTCCTCCTGCTTCGATCCACGCCCTGGCCGCCGGCTGCCTCTGTTCATCTCCTGCTTCAATTCGCACCATGATTTCAGGTTACCTACCCCTCTGTGCTTTCTTCAATCCTCTGCTTTTTCTTTGCCTCGGATTTTTTTTTTTAATTGTTCGTTTTTGTCATTTCAAAGAAAAGGCAAAACAAAAGTCGAACAAGCTTTATGCAATCAGCTCGACGAAAAGAGACGCCAGAACTGTAGTGGGATCTCCAAGAACGATACTGACAATGGTCTCGATGAAAACCTTTAGGATTCTCCAATATTTGTTCCCTTTTCCGCCATTCCCACGCCCTCGAGCTTTAATTGCTTTCAGATTAACCTTCTGAAGAGCCAGTTGTTCGTCCTGATTGGCATTATTAGCATTGATCCAGCCTCCTCCGTTCTTGTACCATTCCTCTAA

Coding sequence (CDS)

GATAGAAAAGAGTGTGGTGTGACGGTTCCTAGAGTTCCAACAGAAGAGAGACATTGGTCTGTGGAGAGGAAGACGTTGGTTGTGTGTTTGCGGTGGGTTCTAACGTTTCTACGTTTATTGGAGTCGAGTTTAATCAACTTTCACGGGTTTAGCTGCAAGCTAGACGAAAATTCCAAAGTCTTCTGTCAGAAGAGCCAACAAGAAGAAAATTCAAATATAAAGACTTTGAAAGAGAGTAAACCTTCTATTCTATTTTTGTTGTCTGCCCACCTTCCCTTCATCCCCAAGTTGGAAATCAAATGCCCTAAAAACTCCCTTCATTTTTCTTCTGAAATTTCCTTCTATTTTCAACTCTCTCTCTCTCTCTCTCATCACCGAATTCCTCCTGCTTCGATCCACGCCCTGGCCGCCGGCTGCCTCTGTTCATCTCCTGCTTCAATTCGCACCATGATTTCAGGTTACCTACCCCTCTGTGCTTTCTTCAATCCTCTGCTTTTTCTTTGCCTCGGATTTTTTTTTTTAATTGTTCGTTTTTGTCATTTCAAAGAAAAGGCAAAACAAAAGTCGAACAAGCTTTATGCAATCAGCTCGACGAAAAGAGACGCCAGAACTGTAGTGGGATCTCCAAGAACGATACTGACAATGGTCTCGATGAAAACCTTTAGGATTCTCCAATATTTGTTCCCTTTTCCGCCATTCCCACGCCCTCGAGCTTTAATTGCTTTCAGATTAACCTTCTGA

Protein sequence

DRKECGVTVPRVPTEERHWSVERKTLVVCLRWVLTFLRLLESSLINFHGFSCKLDENSKVFCQKSQQEENSNIKTLKESKPSILFLLSAHLPFIPKLEIKCPKNSLHFSSEISFYFQLSLSLSHHRIPPASIHALAAGCLCSSPASIRTMISGYLPLCAFFNPLLFLCLGFFFLIVRFCHFKEKAKQKSNKLYAISSTKRDARTVVGSPRTILTMVSMKTFRILQYLFPFPPFPRPRALIAFRLTF
Homology
[Close]
BLAST of MELO3C033713.1 vs. NCBI nr
Match: TYK30860.1 (reactive Intermediate Deaminase A [Cucumis melo var. makuwa])

HSP 1 Score: 63.9 bits (154), Expect = 2.2e-06
Identity = 50/132 (37.88%), Postives = 68/132 (51.52%), Query Frame = 0 

Query: 17  RHW----SVERKTLVVCLRWVLTFLRLLESSLINFHGFSCKLDENSKVFCQKSQQEENSN 76
           R+W    + +   LVV L+ VLTF RLLES L+NFH FS K DEN K+  Q+S+QEEN +
Sbjct: 31  RNWLFLAAFDDSMLVVGLQRVLTFRRLLESELVNFHRFSRKQDENPKISGQRSRQEENPS 90

Query: 77  IKTLKESKPSILFLLSAHL-PFIPKLEIKCPKNSLHFSSEISFYFQLSLSLSHHRIPPAS 136
           + TLK  K +   L +  L PF+    IK   N    ++         ++  H + P   
Sbjct: 91  MNTLKGLKETSWKLQNFGLSPFVVAKAIKEKSNGTLCATWTFHMLAFDVTTLHSKTP--- 150

Query: 137 IHALAAGCLCSS 144
              LA    CSS
Sbjct: 151 ---LAINVCCSS 156

[Close]
BLAST of MELO3C033713.1 vs. NCBI nr
Match: KAA0052379.1 (hypothetical protein E6C27_scaffold207G002260 [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 3.7e-06
Identity = 45/117 (38.46%), Postives = 63/117 (53.85%), Query Frame = 0 

Query: 17  RHW----SVERKTLVVCLRWVLTFLRLLESSLINFHGFSCKLDENSKVFCQKSQQEENSN 76
           R+W    + +   LVV L+ VLTF RLLES L+NFH FS K DEN K+  Q+S+QEEN +
Sbjct: 31  RNWLFLAAFDDSMLVVGLQRVLTFRRLLESELVNFHRFSRKQDENPKISGQRSRQEENPS 90

Query: 77  IKTLKESKPSILFLLSAHL-PFIPKLEIKCPKNSLHFSSEISFYFQLSLSLSHHRIP 129
           + TLK  K +   L +  L PF+    IK   N    ++         ++  H + P
Sbjct: 91  MNTLKGLKETSWKLQNFGLSPFVVAKAIKEKSNGTLCATWTFHMLAFDVTTLHSKTP 147

[Close]
BLAST of MELO3C033713.1 vs. NCBI nr
Match: TYK11141.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 60.8 bits (146), Expect = 1.8e-05
Identity = 36/69 (52.17%), Postives = 44/69 (63.77%), Query Frame = 0 

Query: 36 FLRLLESSLINFHGFSCKLDENSKVFCQKSQQEENSNIKTL-----KESKPSI----LFL 95
          F RLL+S L+NFH FS K D+N KVFCQ+S+QEEN NI +L       S PS+    LFL
Sbjct: 2  FRRLLQSGLVNFHEFSHKQDKNPKVFCQRSRQEENPNIGSLTLIIRSSSNPSVPTSTLFL 61

[Close]
BLAST of MELO3C033713.1 vs. NCBI nr
Match: KAA0053193.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 57.8 bits (138), Expect = 1.6e-04
Identity = 35/71 (49.30%), Postives = 44/71 (61.97%), Query Frame = 0 

Query: 40  LESSLINFHGFSCKLDENSKVFCQKSQQEENSNIKTLKESKPSILFLLSAHLPFIPKLEI 99
           LES L+NFHGFS K  EN KVF Q+S+QEEN ++KTLK   P  L LL  +     KL  
Sbjct: 46  LESGLVNFHGFSRKQAENPKVFGQRSRQEENQSMKTLKVDHPRRLKLLWRY-----KLSS 105

Query: 100 KCPKNSLHFSS 111
           K P + +  +S
Sbjct: 106 KTPISRISSAS 111

[Close]
BLAST of MELO3C033713.1 vs. ExPASy TrEMBL
Match: A0A5D3E5H8 (Reactive Intermediate Deaminase A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00600 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.1e-06
Identity = 50/132 (37.88%), Postives = 68/132 (51.52%), Query Frame = 0 

Query: 17  RHW----SVERKTLVVCLRWVLTFLRLLESSLINFHGFSCKLDENSKVFCQKSQQEENSN 76
           R+W    + +   LVV L+ VLTF RLLES L+NFH FS K DEN K+  Q+S+QEEN +
Sbjct: 31  RNWLFLAAFDDSMLVVGLQRVLTFRRLLESELVNFHRFSRKQDENPKISGQRSRQEENPS 90

Query: 77  IKTLKESKPSILFLLSAHL-PFIPKLEIKCPKNSLHFSSEISFYFQLSLSLSHHRIPPAS 136
           + TLK  K +   L +  L PF+    IK   N    ++         ++  H + P   
Sbjct: 91  MNTLKGLKETSWKLQNFGLSPFVVAKAIKEKSNGTLCATWTFHMLAFDVTTLHSKTP--- 150

Query: 137 IHALAAGCLCSS 144
              LA    CSS
Sbjct: 151 ---LAINVCCSS 156

[Close]
BLAST of MELO3C033713.1 vs. ExPASy TrEMBL
Match: A0A5A7UFX3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G002260 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.8e-06
Identity = 45/117 (38.46%), Postives = 63/117 (53.85%), Query Frame = 0 

Query: 17  RHW----SVERKTLVVCLRWVLTFLRLLESSLINFHGFSCKLDENSKVFCQKSQQEENSN 76
           R+W    + +   LVV L+ VLTF RLLES L+NFH FS K DEN K+  Q+S+QEEN +
Sbjct: 31  RNWLFLAAFDDSMLVVGLQRVLTFRRLLESELVNFHRFSRKQDENPKISGQRSRQEENPS 90

Query: 77  IKTLKESKPSILFLLSAHL-PFIPKLEIKCPKNSLHFSSEISFYFQLSLSLSHHRIP 129
           + TLK  K +   L +  L PF+    IK   N    ++         ++  H + P
Sbjct: 91  MNTLKGLKETSWKLQNFGLSPFVVAKAIKEKSNGTLCATWTFHMLAFDVTTLHSKTP 147

[Close]
BLAST of MELO3C033713.1 vs. ExPASy TrEMBL
Match: A0A5D3CH60 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold66G00480 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 8.9e-06
Identity = 36/69 (52.17%), Postives = 44/69 (63.77%), Query Frame = 0 

Query: 36 FLRLLESSLINFHGFSCKLDENSKVFCQKSQQEENSNIKTL-----KESKPSI----LFL 95
          F RLL+S L+NFH FS K D+N KVFCQ+S+QEEN NI +L       S PS+    LFL
Sbjct: 2  FRRLLQSGLVNFHEFSHKQDKNPKVFCQRSRQEENPNIGSLTLIIRSSSNPSVPTSTLFL 61

[Close]
BLAST of MELO3C033713.1 vs. ExPASy TrEMBL
Match: A0A5A7UB76 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1192G00160 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 7.6e-05
Identity = 35/71 (49.30%), Postives = 44/71 (61.97%), Query Frame = 0 

Query: 40  LESSLINFHGFSCKLDENSKVFCQKSQQEENSNIKTLKESKPSILFLLSAHLPFIPKLEI 99
           LES L+NFHGFS K  EN KVF Q+S+QEEN ++KTLK   P  L LL  +     KL  
Sbjct: 46  LESGLVNFHGFSRKQAENPKVFGQRSRQEENQSMKTLKVDHPRRLKLLWRY-----KLSS 105

Query: 100 KCPKNSLHFSS 111
           K P + +  +S
Sbjct: 106 KTPISRISSAS 111

The following BLAST results are available for this feature:
BLAST of MELO3C033713.1 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK30860.12.2e-0637.88reactive Intermediate Deaminase A [Cucumis melo var. makuwa][more]
KAA0052379.13.7e-0638.46hypothetical protein E6C27_scaffold207G002260 [Cucumis melo var. makuwa][more]
TYK11141.11.8e-0552.17putative mitochondrial protein [Cucumis melo var. makuwa][more]
KAA0053193.11.6e-0449.30ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
BLAST of MELO3C033713.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C033713.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3E5H81.1e-0637.88Reactive Intermediate Deaminase A OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7UFX31.8e-0638.46Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CH608.9e-0652.17Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A5A7UB767.6e-0549.30Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
BLAST of MELO3C033713.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C033713MELO3C033713gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C033713.1:exon:260576MELO3C033713.1:exon:260576exon
MELO3C033713.1:exon:260575MELO3C033713.1:exon:260575exon
MELO3C033713.1:exon:260574MELO3C033713.1:exon:260574exon
MELO3C033713.1:exon:260573MELO3C033713.1:exon:260573exon
MELO3C033713.1:exon:260572MELO3C033713.1:exon:260572exon
MELO3C033713.1:exon:260571MELO3C033713.1:exon:260571exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C033713.1:three_prime_utrMELO3C033713.1:three_prime_utrthree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C033713.1:cdsMELO3C033713.1:cdsCDS
MELO3C033713.1:cdsMELO3C033713.1:cds_2CDS
MELO3C033713.1:cdsMELO3C033713.1:cds_3CDS
MELO3C033713.1:cdsMELO3C033713.1:cds_4CDS
MELO3C033713.1:cdsMELO3C033713.1:cds_5CDS
MELO3C033713.1:cdsMELO3C033713.1:cds_6CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C033713.1:five_prime_utrMELO3C033713.1:five_prime_utrfive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C033713.1MELO3C033713.1-proteinpolypeptide