MELO3C033448.1 (mRNA) Melon (DHL92) v4

Overview
NameMELO3C033448.1
TypemRNA
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr08: 27826638 .. 27829312 (-)
Sequence length297
RNA-Seq ExpressionMELO3C033448.1
SyntenyMELO3C033448.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGAGGAAGCTTTCGATGTATGCTTCGGTCACTGATATCATACCAAACATGGACGATCAGTCTAAAATTTCTGGCCGTATCCTTCATTTGAGTTTATATTCTTTTCTGTTATATTTTCCTTTTCCCTATTGCAATTAGCCAATTACTTTACCTTAACGTGAATTAACTACAGATATTGTGGACAGAAATAAACGAGTTGTCCAAAAGTTTGAATTCGACCCAACTAAGATATCTTCTTTTGATACATGCAATGGCCTTTGGAATATGATTAATTCCCCATAGTAGAGATATCAATTACATTGTCTTTTGTGAATTAGAAGTTTATTATTGCTTGGTCCTTTTAGTCACTTCATGGTATTACAATAGAACGCTTATTTTGTTGTGTATGTATGTTTGAAGGACTACTTTCTAAGGTCCTCTTGTATGTGATAACTTATTGTAAATCAAATCTCCTTGGTCCTTGATGATTATTAAAGAAAAGAATTCCCGTCTATGTTAAGGCACCAATCCATGTAAATGGTGAATGATGTTGCTCATTTTCTTGGATATTTGAGGCTTGGAAGCAACTAACTTTGTATCTATTCCACTGATCTCAATTCTACTATCTTTTGTAATCTGATTATATTAGTTGTTGAAAATGATTTTTTACTTTCTTTATAGTTGAGGTTGAAGGCTACTGTTTTAGCTCATATGTTAGTTTGTTACTTTTCTGCTATTAACTTTAATCTTTCTCATTGTATATCTATACTTCCGTGGAGATGACTTAAGTTTCGGTATTATTTCCTCCACTTTACATCTGTTCATAGCTATGGATGGTACAATGAAAATATTATGACCATGGGATGCTTATGTCTATTCTGATGTAATTCTGAGACAATATTCTATGATAATATTACTTATGTTAGAACACGCAGCAAATAGTTTCAAGCCACCCGAAAGCAAGAAGGACAAGAGCTGGCCACCAACTTTCATTCATGATATTAGATTCAAGCTCCATAAGCTTCATAAAATAGAGTTCAGAATATCAGGTTTTACTCTTCCCCTCGATCTTTTTTCGGTTGACGGAGAGATATTGACGATTTTAAAATTATCTACTGTCTGAGCGAAGGAAACATTACACAATCAGCACACAACTTAAATAGTTATCGTAATTCTGAAACTGAAATAGTTATATTCTATAGTTATCTTCTAGTATTGTTATTTCAAATGACAAACTTCTCCATTGACTGTAGTATCTAATTTTCTGGCTGGTTTGATCTTGAGATGTCTCCTTGCCCGTGTTTATAATGTTGAGTTTCTCGTCGTAGTTGCATAACAGACTTGACTTCCTCCACTGGCATTTTCCAGGTATTGGCGGTTGTCGAGGTTTATAGACTTGCAAGCTTCTGGTACACCACTGCCTTTATAAGCCTTGCAAATGTAGGCCATGAAGTTCTGGTAGTCCTGATTCAGACAAAAGAAAACAGGTTGATTTCAAAGAATCACACAGCAAAGAACAAGGAAAAAACTAGCTTGAATCGAAGCTGACCAACCTCCTGGAGAGGGTGATTATCGACAATGACCCATGGAACAAATCGGTGAGGCGGATTGAGGCGAGTAGTTTCAGAAGCATAGTATTGTTCAAGCTGCATTTCATTGACTTAATCAGGATTCAATCAAGAAAGAAACAGAAATAGAAGATGTTAAGTAAGCAATGCTACCATTTTTCCATGCCCATTTCTGTAGCAATCTATTGGTATGGCACTCAACTTTGCAATATCAAAACACTTTGTCCATTCATTGTGTCTGTTTTGCACTGTCAATCCCTCAACACAATGGATGAATCTGAAATGTTTTTCCTTCGCATACCAAACCACAAAAGTTTAGTAGATTTAACATTTATATCATGCCCATTTCTGTAGCAATTTATACAATGACTTGACTGATGCAGTTTACCTACCTACGTCTAGACAAATTTCAATTTCACAAGATAATCCACTCAACTCTATTATGTTTCAATGTCAAGGAAACTCTTAAAATATTTGATTCTCAGTAGGTGGTTACTATGGATTATATACATTGGTCAATTCATGGTGATTTATATTTATATGTTTAATATTTTGAAGGGATGTTATAATTGTATCCTCGTTATTTCAATTGTTTCTTATGATTACTATAAAAGTTATGTATTATCGTTAATTAACTATATTTGTAATTGAAGATATAATAGTAAAAGGGTTTTTACTATATCAGGGTAAATTGAAATGGTGCAAGCTTCAATGGTATTCAACATGCATTCATCTGGTCCATGCTGCACATGAACAATAACATTTTTAGTTAGTAATTACTCTTAGTATGGATTTGAGATTTCAACGATTAATGAATTAAAATTTCATTACCAAGGAATAATAAAAGAAAACTGAGTAAAGTAGGAGACAAGAGTATTAATAATCATAATTGTAAATGGGGGATGACACTGTGAATACCAACATGACTACATGAGTATTAAATGACCCATATACTTTTTTTTTGAACAAATAATTCTGACCAACATTAATTAGTAATGGGGTTGGTAACTTTTGAATTATGAGTTTTCAGAAAAGAAAATAGATCCACTTCCCCAGGGATCCCATATGAGGAACCCTAAAACAGCTGCCGACTTCAACCACCCGTTCCATGTACTACCATTTGACTAA

mRNA sequence

AGGAGGAAGCTTTCGATGTATGCTTCGGTCACTGATATCATACCAAACATGGACGATCAGTCTAAAATTTCTGGCCAACACGCAGCAAATAGTTTCAAGCCACCCGAAAGCAAGAAGGACAAGAGCTGGCCACCAACTTTCATTCATGATATTAGATTCAAGCTCCATAAGCTTCATAAAATAGAGTTCAGAATATCAGAAAAGAAAATAGATCCACTTCCCCAGGGATCCCATATGAGGAACCCTAAAACAGCTGCCGACTTCAACCACCCGTTCCATGTACTACCATTTGACTAA

Coding sequence (CDS)

ATGTATGCTTCGGTCACTGATATCATACCAAACATGGACGATCAGTCTAAAATTTCTGGCCAACACGCAGCAAATAGTTTCAAGCCACCCGAAAGCAAGAAGGACAAGAGCTGGCCACCAACTTTCATTCATGATATTAGATTCAAGCTCCATAAGCTTCATAAAATAGAGTTCAGAATATCAGAAAAGAAAATAGATCCACTTCCCCAGGGATCCCATATGAGGAACCCTAAAACAGCTGCCGACTTCAACCACCCGTTCCATGTACTACCATTTGACTAA

Protein sequence

MYASVTDIIPNMDDQSKISGQHAANSFKPPESKKDKSWPPTFIHDIRFKLHKLHKIEFRISEKKIDPLPQGSHMRNPKTAADFNHPFHVLPFD
Homology
The following BLAST results are available for this feature:
BLAST of MELO3C033448.1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C033448.1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C033448.1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C033448.1 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C033448MELO3C033448gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C033448.1:exon:250852MELO3C033448.1:exon:250852exon
MELO3C033448.1:exon:250851MELO3C033448.1:exon:250851exon
MELO3C033448.1:exon:250850MELO3C033448.1:exon:250850exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C033448.1:cdsMELO3C033448.1:cdsCDS
MELO3C033448.1:cdsMELO3C033448.1:cds_2CDS
MELO3C033448.1:cdsMELO3C033448.1:cds_3CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C033448.1:five_prime_utrMELO3C033448.1:five_prime_utrfive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C033448.1MELO3C033448.1-proteinpolypeptide