MELO3C033446.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C033446.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr08: 27809482 .. 27810731 (-)
Sequence length	745
RNA-Seq Expression	MELO3C033446.1
Synteny	MELO3C033446.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTACTCAATATTTAATTTTGATCTTGATCTTTCATTTTCATCTTCAAATCCCTCAAACGCTCCTTTTCCTTCTTTCCATCTAAACTTGAACCAAATTTAACCACTTTCACTGTATTTGGTCCTCACCTCCATGGTTTTTTGTGCCTAAATCCTTCTTGGTTTTCACTGTATTTCCATCCACATTGAATTCAACTCTAATTCACTGATTTTGGTGATTTGATGGGATCGGTTGTAAAGGTACTACGAATAATACTCCAAAAGTCCGTCTGTTTCCTCTTTATTTATTAACTCAGGTTTTGATCCTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTGTACTATATAAATCGAAGGTTGGTTGAAGAGAGTGGAGCCTGCAGGTGAAGAAGATGAAGAGATGGCGATTATGGGGTTGTTTTAAACGCTCGTTCCTCTTCCCCACTAAACTGTTTTTTCTCAAACTAAACTCACACCTTCTCCGTAAGCCTAAAGGTAACCTCTTTCTCTCTAACTTGTTTCTGAAATAGTTGAGAAGGAACGCAATTTCCTTTCTCTCTTGGGATTGTTTTATCCGTTTGCCCTGATGAAAGCTTGTTTAATGGCAGGCAATGGGAATGGGCTACTAAGCCTCTACAAGGATATAGAGTCTTGCGGAGAGTACAGAGATATCCAAGTAATGTGGGATATGATTCAGTCCCACAATGTCCATGAAAACACAAGTAGAAGCTTAAGAAGATTGAGGTTTTCTTCAACTTGGAGATCCCTCTGTTTCCAGCCTACTTGCTGAAAGCAGGTTCTTGATGAAAACAGAACCTGCTTTCATCTTCTCTGCACAAAACCACAGAATGTAAATATATAGATAATAATAAGGAAAATAGTTGCTTTGGGAATGTGGAAGTTTTCACTCAAGCTCACAAAGCTTGTCTTTGATTGATATGTTCCCTATGTTTCACTTTCATCAGATGACGAGAAGAGCTTCGGATAGATACCTGTTTTTCGATTTCATCAACATTTGCAGAACAACCCTGCTGATGTTGTTCATAATCTGCAAGAAAATTTTGGTACTTGTTTGGTTTTTACTCATCAGTTGAAGATGTTTAACTGTGTGGGTTTTGGTCTGTTTTCTTGTTGTGTTGGTCTGATTTTTTGATAAAATTGGTCCTTGCTTTTAGCCATTCATTTGCAGATACCACATTGGACAAGAATGTAAAGCCAAAAGCTTATTTGGGAGGAAACTATTAG

mRNA sequence

CTTTACTCAATATTTAATTTTGATCTTGATCTTTCATTTTCATCTTCAAATCCCTCAAACGCTCCTTTTCCTTCTTTCCATCTAAACTTGAACCAAATTTAACCACTTTCACTGTATTTGGTCCTCACCTCCATGGTTTTTTGTGCCTAAATCCTTCTTGGTTTTCACTGTATTTCCATCCACATTGAATTCAACTCTAATTCACTGATTTTGGTGATTTGATGGGATCGGTTGTAAAGGTACTACGAATAATACTCCAAAAGTCCGTCTGTTTCCTCTTTATTTATTAACTCAGGTTTTGATCCTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTGTACTATATAAATCGAAGGTTGGTTGAAGAGAGTGGAGCCTGCAGGTGAAGAAGATGAAGAGATGGCGATTATGGGGTTGTTTTAAACGCTCGTTCCTCTTCCCCACTAAACTGTTTTTTCTCAAACTAAACTCACACCTTCTCCGTAAGCCTAAAGTTGAGAAGGAACGCAATTTCCTTTCTCTCTTGGGATTGTTTTATCCGTTTGCCCTGATGAAAGCTTGTTTAATGGCAGGCAATGGGAATGGGCTACTAAGCCTCTACAAGGATATAGAGTCTTGCGGAGAGTACAGAGATATCCAAAACAACCCTGCTGATGTTGTTCATAATCTGCAAGAAAATTTTGATACCACATTGGACAAGAATGTAAAGCCAAAAGCTTATTTGGGAGGAAACTATTAG

Coding sequence (CDS)

ATGAAGAGATGGCGATTATGGGGTTGTTTTAAACGCTCGTTCCTCTTCCCCACTAAACTGTTTTTTCTCAAACTAAACTCACACCTTCTCCGTAAGCCTAAAGTTGAGAAGGAACGCAATTTCCTTTCTCTCTTGGGATTGTTTTATCCGTTTGCCCTGATGAAAGCTTGTTTAATGGCAGGCAATGGGAATGGGCTACTAAGCCTCTACAAGGATATAGAGTCTTGCGGAGAGTACAGAGATATCCAAAACAACCCTGCTGATGTTGTTCATAATCTGCAAGAAAATTTTGATACCACATTGGACAAGAATGTAAAGCCAAAAGCTTATTTGGGAGGAAACTATTAG

Protein sequence

MKRWRLWGCFKRSFLFPTKLFFLKLNSHLLRKPKVEKERNFLSLLGLFYPFALMKACLMAGNGNGLLSLYKDIESCGEYRDIQNNPADVVHNLQENFDTTLDKNVKPKAYLGGNY

Homology

[Close]

BLAST of MELO3C033446.1 vs. NCBI nr
Match: KAE8649569.1 (hypothetical protein Csa_018089 [Cucumis sativus])

HSP 1 Score: 107.5 bits (267), Expect = 8.0e-20
Identity = 60/103 (58.25%), Postives = 65/103 (63.11%), Query Frame = 0


Query: 1   MKRWRLWGCFKRSFLFPTKLFFLKLNSHLLRKPKVEKERNFLSLLGLFYPFALMKACLMA 60
           MKRWRLWGCFKRSFLFPTKLFFL+LNSHLL KPK                          
Sbjct: 1   MKRWRLWGCFKRSFLFPTKLFFLRLNSHLLHKPK-------------------------- 60

Query: 61  GNGNGLLSLYKDIESCGEYRDIQNNPADVV--HNLQENFDTTL 102
           GNGN LLSLYKDIESCGEYRDIQ    D++  HN+ EN   +L
Sbjct: 61  GNGNALLSLYKDIESCGEYRDIQ-VMWDMIQSHNVHENTSRSL 76

[Close]

BLAST of MELO3C033446.1 vs. NCBI nr
Match: KAG7033756.1 (hypothetical protein SDJN02_03481, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 80.1 bits (196), Expect = 1.4e-11
Identity = 44/83 (53.01%), Postives = 47/83 (56.63%), Query Frame = 0


Query: 1  MKRWRLWGCFKRSFLFPTKLFFLKLNSHLLRKPKVEKERNFLSLLGLFYPFALMKACLMA 60
          MK WRLW C KRSFL PTKLF L++NS  L +PK                          
Sbjct: 1  MKGWRLWDCLKRSFLLPTKLFLLRVNSRHLVQPK-------------------------- 57

Query: 61 GNGNGLLSLYKDIESCGEYRDIQ 84
          GNG GL SLYKDIESCGEYRDIQ
Sbjct: 61 GNGKGLGSLYKDIESCGEYRDIQ 57

[Close]

BLAST of MELO3C033446.1 vs. NCBI nr
Match: KAB2630444.1 (hypothetical protein D8674_007963 [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 78.2 bits (191), Expect = 5.2e-11
Identity = 43/110 (39.09%), Postives = 58/110 (52.73%), Query Frame = 0


Query: 1   MKRWRLWGCFKRSFLFPTKLFFLKLNSHLLRKPKVEKERNFLSLLGLFYPFALMKACLMA 60
           M  W+ W CFK+SFL PTK F LKL SH   K K                          
Sbjct: 1   MVGWKTWICFKQSFLLPTKCFLLKLTSHSRHKSK-------------------------- 60

Query: 61  GNGNGLLSLYKDIESCGEYRDIQNNPADVVHNLQENFDTTLDKNVKPKAY 111
           GNG+GL+SLYKD+ESCGEY DI+    +++H+ Q+N + T  +  +  +Y
Sbjct: 61  GNGHGLVSLYKDMESCGEYEDIR-VMWEIIHSCQQNANNTTRRRKRSSSY 83

[Close]

BLAST of MELO3C033446.1 vs. NCBI nr
Match: KAB2612042.1 (hypothetical protein D8674_041204 [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 77.4 bits (189), Expect = 8.9e-11
Identity = 43/110 (39.09%), Postives = 58/110 (52.73%), Query Frame = 0


Query: 1   MKRWRLWGCFKRSFLFPTKLFFLKLNSHLLRKPKVEKERNFLSLLGLFYPFALMKACLMA 60
           M  W+ W CFK+SFL PTK F LKL SH   K K                          
Sbjct: 1   MVGWKTWICFKQSFLLPTKCFLLKLASHSRHKSK-------------------------- 60

Query: 61  GNGNGLLSLYKDIESCGEYRDIQNNPADVVHNLQENFDTTLDKNVKPKAY 111
           GNG+GL+SLYKD+ESCGEY DI+    +++H+ Q+N + T  +  +  +Y
Sbjct: 61  GNGHGLVSLYKDMESCGEYEDIR-VMWEIIHSCQQNANNTTRRRKRSSSY 83

[Close]

BLAST of MELO3C033446.1 vs. NCBI nr
Match: XP_009337726.1 (PREDICTED: uncharacterized protein LOC103930156 [Pyrus x bretschneideri])

HSP 1 Score: 75.5 bits (184), Expect = 3.4e-10
Identity = 42/110 (38.18%), Postives = 57/110 (51.82%), Query Frame = 0


Query: 1   MKRWRLWGCFKRSFLFPTKLFFLKLNSHLLRKPKVEKERNFLSLLGLFYPFALMKACLMA 60
           M  W+ W CFK+ FL PTK F LKL SH   K K                          
Sbjct: 1   MVGWKSWICFKQFFLLPTKCFLLKLTSHSRHKSK-------------------------- 60

Query: 61  GNGNGLLSLYKDIESCGEYRDIQNNPADVVHNLQENFDTTLDKNVKPKAY 111
           GNG+GL+SLYKD+ESCGEY DI+    +++H+ Q+N + T  +  +  +Y
Sbjct: 61  GNGHGLVSLYKDMESCGEYEDIR-VMWEIIHSCQQNANNTTRRRKRSSSY 83

[Close]

BLAST of MELO3C033446.1 vs. ExPASy TrEMBL
Match: A0A0A0KY16 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G312850 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.9e-20
Identity = 60/103 (58.25%), Postives = 65/103 (63.11%), Query Frame = 0


Query: 1   MKRWRLWGCFKRSFLFPTKLFFLKLNSHLLRKPKVEKERNFLSLLGLFYPFALMKACLMA 60
           MKRWRLWGCFKRSFLFPTKLFFL+LNSHLL KPK                          
Sbjct: 1   MKRWRLWGCFKRSFLFPTKLFFLRLNSHLLHKPK-------------------------- 60

Query: 61  GNGNGLLSLYKDIESCGEYRDIQNNPADVV--HNLQENFDTTL 102
           GNGN LLSLYKDIESCGEYRDIQ    D++  HN+ EN   +L
Sbjct: 61  GNGNALLSLYKDIESCGEYRDIQ-VMWDMIQSHNVHENTSRSL 76

[Close]

BLAST of MELO3C033446.1 vs. ExPASy TrEMBL
Match: A0A5N5I4B1 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_007963 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.5e-11
Identity = 43/110 (39.09%), Postives = 58/110 (52.73%), Query Frame = 0


Query: 1   MKRWRLWGCFKRSFLFPTKLFFLKLNSHLLRKPKVEKERNFLSLLGLFYPFALMKACLMA 60
           M  W+ W CFK+SFL PTK F LKL SH   K K                          
Sbjct: 1   MVGWKTWICFKQSFLLPTKCFLLKLTSHSRHKSK-------------------------- 60

Query: 61  GNGNGLLSLYKDIESCGEYRDIQNNPADVVHNLQENFDTTLDKNVKPKAY 111
           GNG+GL+SLYKD+ESCGEY DI+    +++H+ Q+N + T  +  +  +Y
Sbjct: 61  GNGHGLVSLYKDMESCGEYEDIR-VMWEIIHSCQQNANNTTRRRKRSSSY 83

[Close]

BLAST of MELO3C033446.1 vs. ExPASy TrEMBL
Match: A0A5N5GEX6 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_041204 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 4.3e-11
Identity = 43/110 (39.09%), Postives = 58/110 (52.73%), Query Frame = 0


Query: 1   MKRWRLWGCFKRSFLFPTKLFFLKLNSHLLRKPKVEKERNFLSLLGLFYPFALMKACLMA 60
           M  W+ W CFK+SFL PTK F LKL SH   K K                          
Sbjct: 1   MVGWKTWICFKQSFLLPTKCFLLKLASHSRHKSK-------------------------- 60

Query: 61  GNGNGLLSLYKDIESCGEYRDIQNNPADVVHNLQENFDTTLDKNVKPKAY 111
           GNG+GL+SLYKD+ESCGEY DI+    +++H+ Q+N + T  +  +  +Y
Sbjct: 61  GNGHGLVSLYKDMESCGEYEDIR-VMWEIIHSCQQNANNTTRRRKRSSSY 83

[Close]

BLAST of MELO3C033446.1 vs. ExPASy TrEMBL
Match: A0A6J5V9T6 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS40482 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 6.2e-10
Identity = 41/83 (49.40%), Postives = 48/83 (57.83%), Query Frame = 0


Query: 1  MKRWRLWGCFKRSFLFPTKLFFLKLNSHLLRKPKVEKERNFLSLLGLFYPFALMKACLMA 60
          M  WR W CFKRSFL PTK F LKL S         + RN              KA  +A
Sbjct: 14 MMGWRTWMCFKRSFLLPTKCFLLKLTS---------RSRN--------------KAKEIA 73

Query: 61 GNGNGLLSLYKDIESCGEYRDIQ 84
          GNG+GL++LYKD+ESCGEY DI+
Sbjct: 74 GNGHGLVNLYKDMESCGEYEDIR 73

[Close]

BLAST of MELO3C033446.1 vs. ExPASy TrEMBL
Match: A0A314XZ80 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_28211 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.1e-09
Identity = 41/100 (41.00%), Postives = 53/100 (53.00%), Query Frame = 0


Query: 1   MKRWRLWGCFKRSFLFPTKLFFLKLNSHLLRKPKVEKERNFLSLLGLFYPFALMKACLMA 60
           M  WR W CFKRSFL PTK F LKL S    K K                          
Sbjct: 14  MMGWRTWMCFKRSFLLPTKCFLLKLTSRSRNKAK-------------------------- 73

Query: 61  GNGNGLLSLYKDIESCGEYRDIQNNPADVVHNLQENFDTT 101
           GNG+GL+SLYKD+ESCGEY DI+    +++H+  +N +++
Sbjct: 74  GNGHGLVSLYKDMESCGEYEDIR-VMWEIIHSCPQNTNSS 86

The following BLAST results are available for this feature:

BLAST of MELO3C033446.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8649569.1	8.0e-20	58.25	hypothetical protein Csa_018089 [Cucumis sativus]	[more]
KAG7033756.1	1.4e-11	53.01	hypothetical protein SDJN02_03481, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAB2630444.1	5.2e-11	39.09	hypothetical protein D8674_007963 [Pyrus ussuriensis x Pyrus communis]	[more]
KAB2612042.1	8.9e-11	39.09	hypothetical protein D8674_041204 [Pyrus ussuriensis x Pyrus communis]	[more]
XP_009337726.1	3.4e-10	38.18	PREDICTED: uncharacterized protein LOC103930156 [Pyrus x bretschneideri]	[more]

BLAST of MELO3C033446.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C033446.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY16	3.9e-20	58.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G312850 PE=4 SV=1	[more]
A0A5N5I4B1	2.5e-11	39.09	Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867...	[more]
A0A5N5GEX6	4.3e-11	39.09	Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867...	[more]
A0A6J5V9T6	6.2e-10	49.40	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS40482 PE=4 S...	[more]
A0A314XZ80	1.1e-09	41.00	Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_282...	[more]

BLAST of MELO3C033446.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33181:SF15	SUBFAMILY NOT NAMED	coord: 1..83
None	No IPR available	PANTHER	PTHR33181	OS01G0778500 PROTEIN	coord: 1..83

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C033446	MELO3C033446	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C033446.1:exon:250839	MELO3C033446.1:exon:250839	exon
MELO3C033446.1:exon:250838	MELO3C033446.1:exon:250838	exon
MELO3C033446.1:exon:250837	MELO3C033446.1:exon:250837	exon
MELO3C033446.1:exon:250836	MELO3C033446.1:exon:250836	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C033446.1:cds	MELO3C033446.1:cds	CDS
MELO3C033446.1:cds	MELO3C033446.1:cds_2	CDS
MELO3C033446.1:cds	MELO3C033446.1:cds_3	CDS
MELO3C033446.1:cds	MELO3C033446.1:cds_4	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C033446.1:five_prime_utr	MELO3C033446.1:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C033446.1	MELO3C033446.1-protein	polypeptide