MELO3C033147.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C033147.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	protein TRANSPORT INHIBITOR RESPONSE 1
Location	chr08: 27865661 .. 27867226 (+)
Sequence length	535
RNA-Seq Expression	MELO3C033147.1
Synteny	MELO3C033147.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTTCAATACTGATGGGCTTGCGGCCATTGCTGCTAATTGCAGGTTTGTGGATTTCGGGTTTGCTTGTTTTTATTTTATTTGGGTTTGAGGGTTTTTTCGTTCGTTAAGCAACTTGTTAAAGGATGTTGAAGTGAACATTGTGAATGAGAAAGAGCTTGAAGTTTCAAGTCAGTTGAATCCTTTGTTGTTTGTTGTTTGTTTTTGTATTTCAGGTTTGATCTTGTTTGCATTCTCTCATGTTTTGGCTCAATTTCACTTGTCATTGAGAAAAGTATTTTTTCTAATGTCATTTTCGGTGAGATGAACTACTATCGTTGGAATGAGCTGAGCTCAAGTTAAGCTCACTGGGAATGATGGGTTTTTTTATTCGTGGTAGGCCTGGGATGGCTTCAACGAGTAGATTTAGTCGTTTTACCTTTTTGTTCTTTCCATTTTTATGGGGGTCGAGTTAGGGTGGGGTTTTGGAGGAAAATTTGTTGCTTTCTTCCTGTTTTGGAACCATTAATCTGGTTCACTTCTCCGTTCTTTTTACCACTTCATGACCCTATATGATTTTGGTATCCAGTTATGGTTATCAGTGTTATAAATCTGAACGAGTTTTCTTTTGGCATCCTTGAACTTAAATTCTACTTTGGACTTTCGATTTTTCTATTCTTGAAAATTTGAGTCTAATAATTTGATAGTTTAGTTGGTTTCTATGTGCTGAAGTCTCGAATTTGGCTGCATTGTCTTTTTACAATCGTTTTAATGAATCTTTGAGCTTAATTTATGTAGAATTTGAAAATCAGAATCACATCTATTATTGTGGTTTAGACATTCCTTGATTCTTAAGAGACTGCTATCTGTGAAGTGATATATTTTGACAGTGGTCAATGTTTAGACTAGGAAGTTCTTCAGTTTATGCCTGTTGTTGCAAAGTGGTTGAGAAAGGTGGCACCTTGGATAATTTTTTTGGTTTATTTTCCATGTTCTTTTCATCGTTGAAGGGGTGGGTCCTGCTTTTATGTAATGTGGTTTTCTTTAAGCTTTTAAAGTATCATTGTTTTTACACGGCTAGCTGTTGACTGAACCAAGAATTTGAAAGTATTGGACTTACGAGAGAGTATTGTGGAAGATCTGAATAGGCATTGGCTCAGCCATTTTCCTGATACATATACGTCATTGGTATCTCTCAATATTGCTTGTTTAAGGTCTGAGGTGAGTGTATCAGCACTGGAGCGTCTAGTGGATAGGTGTCCAAACTTAAGGACACTGCGTCTCAATCGTCCAATTCCCCTTGATAGGCATGCCAACCTACTTCGTCGTGCCCCTCAGCTGGTTGAGTTTGGTGTTGGATGCTATATGGCTGACTTGAGATCTGAAGTTTTTTCGAGCTTAACTGGGGCATTTACAAGCTGTACAAATTGAAGAGTCTGTCAGGATTTTGGGATGTTGTCCCTACATACCTTCCTTCCATTTATCCAACATGCTCTCGGCTAACATCCTTAAACTTAAGCTATGCTACAATTCAATGTGACGATCTTACAAAGCTTATCAGTCAATGTCATAATTTACAGAAGCTTTGG

mRNA sequence

GGTTCAATACTGATGGGCTTGCGGCCATTGCTGCTAATTGCAGGAATTTGAAAGTATTGGACTTACGAGAGAGTATTGTGGAAGATCTGAATAGGCATTGGCTCAGCCATTTTCCTGATACATATACGTCATTGGTATCTCTCAATATTGCTTGTTTAAGGTCTGAGGTGAGTGTATCAGCACTGGAGCGTCTAGTGGATAGGTGTCCAAACTTAAGGACACTGCGTCTCAATCGTCCAATTCCCCTTGATAGGCATGCCAACCTACTTCGTCGTGCCCCTCAGCTGGTTGAGTTTGGTGTTGGATGCTATATGGCTGACTTGAGATCTGAAGTTTTTTCGAGCTTAACTGGGGCATTTACAAGCTGTACAAATTGAAGAGTCTGTCAGGATTTTGGGATGTTGTCCCTACATACCTTCCTTCCATTTATCCAACATGCTCTCGGCTAACATCCTTAAACTTAAGCTATGCTACAATTCAATGTGACGATCTTACAAAGCTTATCAGTCAATGTCATAATTTACAGAAGCTTTGG

Coding sequence (CDS)

TTCAATACTGATGGGCTTGCGGCCATTGCTGCTAATTGCAGGAATTTGAAAGTATTGGACTTACGAGAGAGTATTGTGGAAGATCTGAATAGGCATTGGCTCAGCCATTTTCCTGATACATATACGTCATTGGTATCTCTCAATATTGCTTGTTTAAGGTCTGAGGTGAGTGTATCAGCACTGGAGCGTCTAGTGGATAGGTGTCCAAACTTAAGGACACTGCGTCTCAATCGTCCAATTCCCCTTGATAGGCATGCCAACCTACTTCGTCGTGCCCCTCAGCTGGTTGAGTTTGGTGTTGGATGCTATATGGCTGACTTGAGATCTGAAGTTTTTTCGAGCTTAACTGGGGCATTTACAAGCTGTACAAATTGA

Protein sequence

FNTDGLAAIAANCRNLKVLDLRESIVEDLNRHWLSHFPDTYTSLVSLNIACLRSEVSVSALERLVDRCPNLRTLRLNRPIPLDRHANLLRRAPQLVEFGVGCYMADLRSEVFSSLTGAFTSCTN

Homology

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BLAST of MELO3C033147.1 vs. NCBI nr
Match: XP_008451438.1 (PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1 [Cucumis melo])

HSP 1 Score: 236.5 bits (602), Expect = 1.2e-58
Identity = 117/123 (95.12%), Postives = 119/123 (96.75%), Query Frame = 0


Query: 1   FNTDGLAAIAANCRNLKVLDLRESIVEDLNRHWLSHFPDTYTSLVSLNIACLRSEVSVSA 60
           F+TDGLAAIAANCRNLKVLDLRES VEDLN HWLSHFPDTYTSLVSLNIACL SEVSVSA
Sbjct: 142 FSTDGLAAIAANCRNLKVLDLRESDVEDLNGHWLSHFPDTYTSLVSLNIACLGSEVSVSA 201

Query: 61  LERLVDRCPNLRTLRLNRPIPLDRHANLLRRAPQLVEFGVGCYMADLRSEVFSSLTGAFT 120
           LERLVDRCPNLRTLRLNRP+PLDRHANLLRRAPQLVEFG GCYMADLRSEVFSSLTGAFT
Sbjct: 202 LERLVDRCPNLRTLRLNRPVPLDRHANLLRRAPQLVEFGAGCYMADLRSEVFSSLTGAFT 261

Query: 121 SCT 124
           SCT
Sbjct: 262 SCT 264

[Close]

BLAST of MELO3C033147.1 vs. NCBI nr
Match: KAA0057534.1 (protein TRANSPORT INHIBITOR RESPONSE 1 [Cucumis melo var. makuwa] >TYK18256.1 protein TRANSPORT INHIBITOR RESPONSE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 236.5 bits (602), Expect = 1.2e-58
Identity = 117/123 (95.12%), Postives = 119/123 (96.75%), Query Frame = 0


Query: 1   FNTDGLAAIAANCRNLKVLDLRESIVEDLNRHWLSHFPDTYTSLVSLNIACLRSEVSVSA 60
           F+TDGLAAIAANCRNLKVLDLRES VEDLN HWLSHFPDTYTSLVSLNIACL SEVSVSA
Sbjct: 142 FSTDGLAAIAANCRNLKVLDLRESDVEDLNGHWLSHFPDTYTSLVSLNIACLGSEVSVSA 201

Query: 61  LERLVDRCPNLRTLRLNRPIPLDRHANLLRRAPQLVEFGVGCYMADLRSEVFSSLTGAFT 120
           LERLVDRCPNLRTLRLNRP+PLDRHANLLRRAPQLVEFG GCYMADLRSEVFSSLTGAFT
Sbjct: 202 LERLVDRCPNLRTLRLNRPVPLDRHANLLRRAPQLVEFGAGCYMADLRSEVFSSLTGAFT 261

Query: 121 SCT 124
           SCT
Sbjct: 262 SCT 264

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BLAST of MELO3C033147.1 vs. NCBI nr
Match: NP_001267546.1 (protein TRANSPORT INHIBITOR RESPONSE 1-like [Cucumis sativus] >AGA63733.1 transport inhibitor response 1 [Cucumis sativus] >AGI15227.1 transport inhibitor response protein [Cucumis sativus] >KGN44877.1 hypothetical protein Csa_016512 [Cucumis sativus])

HSP 1 Score: 231.9 bits (590), Expect = 3.0e-57
Identity = 115/123 (93.50%), Postives = 118/123 (95.93%), Query Frame = 0


Query: 1   FNTDGLAAIAANCRNLKVLDLRESIVEDLNRHWLSHFPDTYTSLVSLNIACLRSEVSVSA 60
           F+TDGLAAIAANCR+LKVLDLRES VEDLN HWLSHFPDTYTSLVSLNIACL SEVSVSA
Sbjct: 142 FSTDGLAAIAANCRHLKVLDLRESDVEDLNGHWLSHFPDTYTSLVSLNIACLVSEVSVSA 201

Query: 61  LERLVDRCPNLRTLRLNRPIPLDRHANLLRRAPQLVEFGVGCYMADLRSEVFSSLTGAFT 120
           LERLVDRCPNLRTLRLNRP+PLDRHANLLRRAPQLVEFG GCY ADLRSEVFSSLTGAFT
Sbjct: 202 LERLVDRCPNLRTLRLNRPVPLDRHANLLRRAPQLVEFGAGCYTADLRSEVFSSLTGAFT 261

Query: 121 SCT 124
           SCT
Sbjct: 262 SCT 264

[Close]

BLAST of MELO3C033147.1 vs. NCBI nr
Match: XP_038876726.1 (protein TRANSPORT INHIBITOR RESPONSE 1-like [Benincasa hispida])

HSP 1 Score: 229.9 bits (585), Expect = 1.2e-56
Identity = 114/123 (92.68%), Postives = 117/123 (95.12%), Query Frame = 0


Query: 1   FNTDGLAAIAANCRNLKVLDLRESIVEDLNRHWLSHFPDTYTSLVSLNIACLRSEVSVSA 60
           F+TDGLAAIAANCRNLKVLDLRES VEDLN HWLSHFPDTYTSLVSLNIACL SEVSVSA
Sbjct: 142 FSTDGLAAIAANCRNLKVLDLRESDVEDLNGHWLSHFPDTYTSLVSLNIACLGSEVSVSA 201

Query: 61  LERLVDRCPNLRTLRLNRPIPLDRHANLLRRAPQLVEFGVGCYMADLRSEVFSSLTGAFT 120
           LERLVDRCPNLRTLRLNRP+PLDRHANLL RAPQLVEFG GCY ADLRSEVFSSLTGAFT
Sbjct: 202 LERLVDRCPNLRTLRLNRPVPLDRHANLLCRAPQLVEFGAGCYTADLRSEVFSSLTGAFT 261

Query: 121 SCT 124
           +CT
Sbjct: 262 NCT 264

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BLAST of MELO3C033147.1 vs. NCBI nr
Match: XP_023548515.1 (protein TRANSPORT INHIBITOR RESPONSE 1-like [Cucurbita pepo subsp. pepo] >KAG6575863.1 Protein TRANSPORT INHIBITOR RESPONSE 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 224.6 bits (571), Expect = 4.9e-55
Identity = 109/123 (88.62%), Postives = 117/123 (95.12%), Query Frame = 0


Query: 1   FNTDGLAAIAANCRNLKVLDLRESIVEDLNRHWLSHFPDTYTSLVSLNIACLRSEVSVSA 60
           F+TDGLAAIAANCRNL+VLDLRES VEDLN HWLSHFP+TYTSLVSLN ACL SEVS+SA
Sbjct: 142 FSTDGLAAIAANCRNLEVLDLRESDVEDLNGHWLSHFPETYTSLVSLNFACLGSEVSISA 201

Query: 61  LERLVDRCPNLRTLRLNRPIPLDRHANLLRRAPQLVEFGVGCYMADLRSEVFSSLTGAFT 120
           LERLVDRCPNL+TLRLNRP+PLDRHA+LLRRAPQLVEFG GCY ADLRSEVFS+LTGAFT
Sbjct: 202 LERLVDRCPNLQTLRLNRPVPLDRHASLLRRAPQLVEFGAGCYTADLRSEVFSNLTGAFT 261

Query: 121 SCT 124
           SCT
Sbjct: 262 SCT 264

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BLAST of MELO3C033147.1 vs. ExPASy Swiss-Prot
Match: Q570C0 (Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=TIR1 PE=1 SV=2)

HSP 1 Score: 172.6 bits (436), Expect = 2.9e-42
Identity = 84/122 (68.85%), Postives = 102/122 (83.61%), Query Frame = 0


Query: 1   FNTDGLAAIAANCRNLKVLDLRESIVEDLNRHWLSHFPDTYTSLVSLNIACLRSEVSVSA 60
           F+TDGLAAIAA CRNLK LDLRES V+D++ HWLSHFPDTYTSLVSLNI+CL SEVS SA
Sbjct: 143 FSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSA 202

Query: 61  LERLVDRCPNLRTLRLNRPIPLDRHANLLRRAPQLVEFGVGCYMADLRSEVFSSLTGAFT 120
           LERLV RCPNL++L+LNR +PL++ A LL+RAPQL E G G Y A++R +V+S L+ A +
Sbjct: 203 LERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALS 262

Query: 121 SC 123
            C
Sbjct: 263 GC 264

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BLAST of MELO3C033147.1 vs. ExPASy Swiss-Prot
Match: Q0DKP3 (Transport inhibitor response 1-like protein Os05g0150500 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0150500 PE=2 SV=2)

HSP 1 Score: 147.1 bits (370), Expect = 1.3e-34
Identity = 70/122 (57.38%), Postives = 94/122 (77.05%), Query Frame = 0


Query: 1   FNTDGLAAIAANCRNLKVLDLRESIVEDLNRHWLSHFPDTYTSLVSLNIACLRSEVSVSA 60
           F+T GLAAIAA CR+L+ LDL+E+ +ED + HWLS FP+++TSLV+LN +CL  EV+++ 
Sbjct: 154 FSTAGLAAIAAGCRHLRELDLQENEIEDCSIHWLSLFPESFTSLVTLNFSCLEGEVNITV 213

Query: 61  LERLVDRCPNLRTLRLNRPIPLDRHANLLRRAPQLVEFGVGCYMADLRSEVFSSLTGAFT 120
           LERLV RC NL+TL+LN  IPLD+ A+LL +APQLVE G G + AD  S++F+ L  AF 
Sbjct: 214 LERLVTRCHNLKTLKLNNAIPLDKLASLLHKAPQLVELGTGKFSADYHSDLFAKLEAAFG 273

Query: 121 SC 123
            C
Sbjct: 274 GC 275

[Close]

BLAST of MELO3C033147.1 vs. ExPASy Swiss-Prot
Match: Q9ZR12 (GRR1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=GRH1 PE=1 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.7e-34
Identity = 73/122 (59.84%), Postives = 93/122 (76.23%), Query Frame = 0


Query: 1   FNTDGLAAIAANCRNLKVLDLRESIVEDLNRHWLSHFPDTYTSLVSLNIACLRSEVSVSA 60
           F+TDG+AAIAA CRNL+VL+LRE IVEDL   WLS+FP++ TSLVSL+ +CL SEV +S 
Sbjct: 139 FSTDGIAAIAATCRNLRVLELRECIVEDLGGDWLSYFPESSTSLVSLDFSCLDSEVKISD 198

Query: 61  LERLVDRCPNLRTLRLNRPIPLDRHANLLRRAPQLVEFGVGCYMADLRSEVFSSLTGAFT 120
           LERLV R PNL++L+LN  + LD   +LLR APQL E G G + A L+ E FS L+ AF+
Sbjct: 199 LERLVSRSPNLKSLKLNPAVTLDGLVSLLRCAPQLTELGTGSFAAQLKPEAFSKLSEAFS 258

Query: 121 SC 123
           +C
Sbjct: 259 NC 260

[Close]

BLAST of MELO3C033147.1 vs. ExPASy Swiss-Prot
Match: Q9LW29 (Protein AUXIN SIGNALING F-BOX 2 OS=Arabidopsis thaliana OX=3702 GN=AFB2 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.9e-30
Identity = 67/124 (54.03%), Postives = 87/124 (70.16%), Query Frame = 0


Query: 1   FNTDGLAAIAANCRNLKVLDLRESIVEDLNRHWLSHFPDTYTSLVSLNIACLRSEVSVSA 60
           F TDGLA+IAANCR+L+ LDL+E+ ++D    WLS FPDT T+LV+LN ACL  E ++ A
Sbjct: 138 FTTDGLASIAANCRHLRDLDLQENEIDDHRGQWLSCFPDTCTTLVTLNFACLEGETNLVA 197

Query: 61  LERLVDRCPNLRTLRLNRPIPLDRHANLLRRAPQLVEFGVGCYMADLRSEVFSSLTGAFT 120
           LERLV R PNL++L+LNR +PLD  A L+  APQ+V+ GVG Y  D  SE +  L     
Sbjct: 198 LERLVARSPNLKSLKLNRAVPLDALARLMACAPQIVDLGVGSYENDPDSESYLKLMAVIK 257

Query: 121 SCTN 125
            CT+
Sbjct: 258 KCTS 261

[Close]

BLAST of MELO3C033147.1 vs. ExPASy Swiss-Prot
Match: Q9LPW7 (Protein AUXIN SIGNALING F-BOX 3 OS=Arabidopsis thaliana OX=3702 GN=AFB3 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.6e-29
Identity = 66/124 (53.23%), Postives = 89/124 (71.77%), Query Frame = 0


Query: 1   FNTDGLAAIAANCRNLKVLDLRESIVEDLNRHWLSHFPDTYTSLVSLNIACLRSEVSVSA 60
           F TDGLA+IAANCR+L+ LDL+E+ ++D    WL+ FPD+ T+L+SLN ACL+ E +V+A
Sbjct: 138 FTTDGLASIAANCRHLRELDLQENEIDDHRGQWLNCFPDSCTTLMSLNFACLKGETNVAA 197

Query: 61  LERLVDRCPNLRTLRLNRPIPLDRHANLLRRAPQLVEFGVGCYMADLRSEVFSSLTGAFT 120
           LERLV R PNL++L+LNR +PLD  A L+  APQLV+ GVG Y  +   E F+ L  A  
Sbjct: 198 LERLVARSPNLKSLKLNRAVPLDALARLMSCAPQLVDLGVGSYENEPDPESFAKLMTAIK 257

Query: 121 SCTN 125
             T+
Sbjct: 258 KYTS 261

[Close]

BLAST of MELO3C033147.1 vs. ExPASy TrEMBL
Match: A0A5A7UR14 (Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001970 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 6.0e-59
Identity = 117/123 (95.12%), Postives = 119/123 (96.75%), Query Frame = 0


Query: 1   FNTDGLAAIAANCRNLKVLDLRESIVEDLNRHWLSHFPDTYTSLVSLNIACLRSEVSVSA 60
           F+TDGLAAIAANCRNLKVLDLRES VEDLN HWLSHFPDTYTSLVSLNIACL SEVSVSA
Sbjct: 142 FSTDGLAAIAANCRNLKVLDLRESDVEDLNGHWLSHFPDTYTSLVSLNIACLGSEVSVSA 201

Query: 61  LERLVDRCPNLRTLRLNRPIPLDRHANLLRRAPQLVEFGVGCYMADLRSEVFSSLTGAFT 120
           LERLVDRCPNLRTLRLNRP+PLDRHANLLRRAPQLVEFG GCYMADLRSEVFSSLTGAFT
Sbjct: 202 LERLVDRCPNLRTLRLNRPVPLDRHANLLRRAPQLVEFGAGCYMADLRSEVFSSLTGAFT 261

Query: 121 SCT 124
           SCT
Sbjct: 262 SCT 264

[Close]

BLAST of MELO3C033147.1 vs. ExPASy TrEMBL
Match: A0A1S3BRJ6 (protein TRANSPORT INHIBITOR RESPONSE 1 OS=Cucumis melo OX=3656 GN=LOC103492732 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 6.0e-59
Identity = 117/123 (95.12%), Postives = 119/123 (96.75%), Query Frame = 0


Query: 1   FNTDGLAAIAANCRNLKVLDLRESIVEDLNRHWLSHFPDTYTSLVSLNIACLRSEVSVSA 60
           F+TDGLAAIAANCRNLKVLDLRES VEDLN HWLSHFPDTYTSLVSLNIACL SEVSVSA
Sbjct: 142 FSTDGLAAIAANCRNLKVLDLRESDVEDLNGHWLSHFPDTYTSLVSLNIACLGSEVSVSA 201

Query: 61  LERLVDRCPNLRTLRLNRPIPLDRHANLLRRAPQLVEFGVGCYMADLRSEVFSSLTGAFT 120
           LERLVDRCPNLRTLRLNRP+PLDRHANLLRRAPQLVEFG GCYMADLRSEVFSSLTGAFT
Sbjct: 202 LERLVDRCPNLRTLRLNRPVPLDRHANLLRRAPQLVEFGAGCYMADLRSEVFSSLTGAFT 261

Query: 121 SCT 124
           SCT
Sbjct: 262 SCT 264

[Close]

BLAST of MELO3C033147.1 vs. ExPASy TrEMBL
Match: M1GCN5 (Transport inhibitor response 1 OS=Cucumis sativus OX=3659 GN=Csa_7G393970 PE=2 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.5e-57
Identity = 115/123 (93.50%), Postives = 118/123 (95.93%), Query Frame = 0


Query: 1   FNTDGLAAIAANCRNLKVLDLRESIVEDLNRHWLSHFPDTYTSLVSLNIACLRSEVSVSA 60
           F+TDGLAAIAANCR+LKVLDLRES VEDLN HWLSHFPDTYTSLVSLNIACL SEVSVSA
Sbjct: 142 FSTDGLAAIAANCRHLKVLDLRESDVEDLNGHWLSHFPDTYTSLVSLNIACLVSEVSVSA 201

Query: 61  LERLVDRCPNLRTLRLNRPIPLDRHANLLRRAPQLVEFGVGCYMADLRSEVFSSLTGAFT 120
           LERLVDRCPNLRTLRLNRP+PLDRHANLLRRAPQLVEFG GCY ADLRSEVFSSLTGAFT
Sbjct: 202 LERLVDRCPNLRTLRLNRPVPLDRHANLLRRAPQLVEFGAGCYTADLRSEVFSSLTGAFT 261

Query: 121 SCT 124
           SCT
Sbjct: 262 SCT 264

[Close]

BLAST of MELO3C033147.1 vs. ExPASy TrEMBL
Match: A0A6J1GQR4 (protein TRANSPORT INHIBITOR RESPONSE 1-like OS=Cucurbita moschata OX=3662 GN=LOC111456212 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.1e-55
Identity = 108/123 (87.80%), Postives = 117/123 (95.12%), Query Frame = 0


Query: 1   FNTDGLAAIAANCRNLKVLDLRESIVEDLNRHWLSHFPDTYTSLVSLNIACLRSEVSVSA 60
           F+TDGLAAIAANCRNL+VLDLRES VEDLN HWLSHFP+TYTSL+SLN ACL SEVS+SA
Sbjct: 142 FSTDGLAAIAANCRNLEVLDLRESDVEDLNGHWLSHFPETYTSLISLNFACLGSEVSISA 201

Query: 61  LERLVDRCPNLRTLRLNRPIPLDRHANLLRRAPQLVEFGVGCYMADLRSEVFSSLTGAFT 120
           LERLVDRCPNL+TLRLNRP+PLDRHA+LLRRAPQLVEFG GCY ADLRSEVFS+LTGAFT
Sbjct: 202 LERLVDRCPNLQTLRLNRPVPLDRHASLLRRAPQLVEFGAGCYTADLRSEVFSNLTGAFT 261

Query: 121 SCT 124
           SCT
Sbjct: 262 SCT 264

[Close]

BLAST of MELO3C033147.1 vs. ExPASy TrEMBL
Match: A0A6J1JXM2 (protein TRANSPORT INHIBITOR RESPONSE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111488788 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 6.8e-55
Identity = 108/123 (87.80%), Postives = 116/123 (94.31%), Query Frame = 0


Query: 1   FNTDGLAAIAANCRNLKVLDLRESIVEDLNRHWLSHFPDTYTSLVSLNIACLRSEVSVSA 60
           F+TDGLAAIAANCRNL+VLDLRES VEDLN HWLSHFP+TYTSLVSLN ACL SEVS+SA
Sbjct: 142 FSTDGLAAIAANCRNLEVLDLRESDVEDLNGHWLSHFPETYTSLVSLNFACLGSEVSISA 201

Query: 61  LERLVDRCPNLRTLRLNRPIPLDRHANLLRRAPQLVEFGVGCYMADLRSEVFSSLTGAFT 120
           LERLVDRCPNL+TLRLNRP+PLDRHA+LLRRAPQL EFG GCY ADLRSEVFS+LTGAFT
Sbjct: 202 LERLVDRCPNLQTLRLNRPVPLDRHASLLRRAPQLAEFGAGCYTADLRSEVFSNLTGAFT 261

Query: 121 SCT 124
           SCT
Sbjct: 262 SCT 264

[Close]

BLAST of MELO3C033147.1 vs. TAIR 10
Match: AT3G62980.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 172.6 bits (436), Expect = 2.0e-43
Identity = 84/122 (68.85%), Postives = 102/122 (83.61%), Query Frame = 0


Query: 1   FNTDGLAAIAANCRNLKVLDLRESIVEDLNRHWLSHFPDTYTSLVSLNIACLRSEVSVSA 60
           F+TDGLAAIAA CRNLK LDLRES V+D++ HWLSHFPDTYTSLVSLNI+CL SEVS SA
Sbjct: 143 FSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSA 202

Query: 61  LERLVDRCPNLRTLRLNRPIPLDRHANLLRRAPQLVEFGVGCYMADLRSEVFSSLTGAFT 120
           LERLV RCPNL++L+LNR +PL++ A LL+RAPQL E G G Y A++R +V+S L+ A +
Sbjct: 203 LERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALS 262

Query: 121 SC 123
            C
Sbjct: 263 GC 264

[Close]

BLAST of MELO3C033147.1 vs. TAIR 10
Match: AT4G03190.1 (GRR1-like protein 1 )

HSP 1 Score: 146.7 bits (369), Expect = 1.2e-35
Identity = 73/122 (59.84%), Postives = 93/122 (76.23%), Query Frame = 0


Query: 1   FNTDGLAAIAANCRNLKVLDLRESIVEDLNRHWLSHFPDTYTSLVSLNIACLRSEVSVSA 60
           F+TDG+AAIAA CRNL+VL+LRE IVEDL   WLS+FP++ TSLVSL+ +CL SEV +S 
Sbjct: 139 FSTDGIAAIAATCRNLRVLELRECIVEDLGGDWLSYFPESSTSLVSLDFSCLDSEVKISD 198

Query: 61  LERLVDRCPNLRTLRLNRPIPLDRHANLLRRAPQLVEFGVGCYMADLRSEVFSSLTGAFT 120
           LERLV R PNL++L+LN  + LD   +LLR APQL E G G + A L+ E FS L+ AF+
Sbjct: 199 LERLVSRSPNLKSLKLNPAVTLDGLVSLLRCAPQLTELGTGSFAAQLKPEAFSKLSEAFS 258

Query: 121 SC 123
           +C
Sbjct: 259 NC 260

[Close]

BLAST of MELO3C033147.1 vs. TAIR 10
Match: AT3G26810.1 (auxin signaling F-box 2 )

HSP 1 Score: 133.3 bits (334), Expect = 1.4e-31
Identity = 67/124 (54.03%), Postives = 87/124 (70.16%), Query Frame = 0


Query: 1   FNTDGLAAIAANCRNLKVLDLRESIVEDLNRHWLSHFPDTYTSLVSLNIACLRSEVSVSA 60
           F TDGLA+IAANCR+L+ LDL+E+ ++D    WLS FPDT T+LV+LN ACL  E ++ A
Sbjct: 138 FTTDGLASIAANCRHLRDLDLQENEIDDHRGQWLSCFPDTCTTLVTLNFACLEGETNLVA 197

Query: 61  LERLVDRCPNLRTLRLNRPIPLDRHANLLRRAPQLVEFGVGCYMADLRSEVFSSLTGAFT 120
           LERLV R PNL++L+LNR +PLD  A L+  APQ+V+ GVG Y  D  SE +  L     
Sbjct: 198 LERLVARSPNLKSLKLNRAVPLDALARLMACAPQIVDLGVGSYENDPDSESYLKLMAVIK 257

Query: 121 SCTN 125
            CT+
Sbjct: 258 KCTS 261

[Close]

BLAST of MELO3C033147.1 vs. TAIR 10
Match: AT1G12820.1 (auxin signaling F-box 3 )

HSP 1 Score: 130.2 bits (326), Expect = 1.2e-30
Identity = 66/124 (53.23%), Postives = 89/124 (71.77%), Query Frame = 0


Query: 1   FNTDGLAAIAANCRNLKVLDLRESIVEDLNRHWLSHFPDTYTSLVSLNIACLRSEVSVSA 60
           F TDGLA+IAANCR+L+ LDL+E+ ++D    WL+ FPD+ T+L+SLN ACL+ E +V+A
Sbjct: 138 FTTDGLASIAANCRHLRELDLQENEIDDHRGQWLNCFPDSCTTLMSLNFACLKGETNVAA 197

Query: 61  LERLVDRCPNLRTLRLNRPIPLDRHANLLRRAPQLVEFGVGCYMADLRSEVFSSLTGAFT 120
           LERLV R PNL++L+LNR +PLD  A L+  APQLV+ GVG Y  +   E F+ L  A  
Sbjct: 198 LERLVARSPNLKSLKLNRAVPLDALARLMSCAPQLVDLGVGSYENEPDPESFAKLMTAIK 257

Query: 121 SCTN 125
             T+
Sbjct: 258 KYTS 261

[Close]

BLAST of MELO3C033147.1 vs. TAIR 10
Match: AT4G24390.2 (RNI-like superfamily protein )

HSP 1 Score: 91.7 bits (226), Expect = 4.6e-19
Identity = 53/124 (42.74%), Postives = 68/124 (54.84%), Query Frame = 0


Query: 1   FNTDGLAAIAANCRNLKVLDLRESIVEDLNRHWLSHFPDTYTSLVSLNIACLRSEVSVSA 60
           F T G+A +A  CR LKVLDL ES V D    W+S FP+  T L SL+  C+ S ++  A
Sbjct: 188 FGTSGIAIVANKCRQLKVLDLMESEVTDDELDWISCFPEGETHLESLSFDCVESPINFKA 247

Query: 61  LERLVDRCPNLRTLRLNRPIPLDRHANLLRRAPQLVEFGVGCYMAD--LRSEVFSSLTGA 120
           LE LV R P L+ LR NR + L+    L+ RAPQL   G G +  D   + E       A
Sbjct: 248 LEELVVRSPFLKKLRTNRFVSLEELHRLMVRAPQLTSLGTGSFSPDNVPQGEQQPDYAAA 307

Query: 121 FTSC 123
           F +C
Sbjct: 308 FRAC 311

The following BLAST results are available for this feature:

BLAST of MELO3C033147.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008451438.1	1.2e-58	95.12	PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1 [Cucumis melo]	[more]
KAA0057534.1	1.2e-58	95.12	protein TRANSPORT INHIBITOR RESPONSE 1 [Cucumis melo var. makuwa] >TYK18256.1 pr...	[more]
NP_001267546.1	3.0e-57	93.50	protein TRANSPORT INHIBITOR RESPONSE 1-like [Cucumis sativus] >AGA63733.1 transp...	[more]
XP_038876726.1	1.2e-56	92.68	protein TRANSPORT INHIBITOR RESPONSE 1-like [Benincasa hispida]	[more]
XP_023548515.1	4.9e-55	88.62	protein TRANSPORT INHIBITOR RESPONSE 1-like [Cucurbita pepo subsp. pepo] >KAG657...	[more]

BLAST of MELO3C033147.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q570C0	2.9e-42	68.85	Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=TIR1 P...	[more]
Q0DKP3	1.3e-34	57.38	Transport inhibitor response 1-like protein Os05g0150500 OS=Oryza sativa subsp. ...	[more]
Q9ZR12	1.7e-34	59.84	GRR1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=GRH1 PE=1 SV=1	[more]
Q9LW29	1.9e-30	54.03	Protein AUXIN SIGNALING F-BOX 2 OS=Arabidopsis thaliana OX=3702 GN=AFB2 PE=1 SV=...	[more]
Q9LPW7	1.6e-29	53.23	Protein AUXIN SIGNALING F-BOX 3 OS=Arabidopsis thaliana OX=3702 GN=AFB3 PE=1 SV=...	[more]

BLAST of MELO3C033147.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UR14	6.0e-59	95.12	Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3BRJ6	6.0e-59	95.12	protein TRANSPORT INHIBITOR RESPONSE 1 OS=Cucumis melo OX=3656 GN=LOC103492732 P...	[more]
M1GCN5	1.5e-57	93.50	Transport inhibitor response 1 OS=Cucumis sativus OX=3659 GN=Csa_7G393970 PE=2 S...	[more]
A0A6J1GQR4	3.1e-55	87.80	protein TRANSPORT INHIBITOR RESPONSE 1-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1JXM2	6.8e-55	87.80	protein TRANSPORT INHIBITOR RESPONSE 1-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of MELO3C033147.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62980.1	2.0e-43	68.85	F-box/RNI-like superfamily protein	[more]
AT4G03190.1	1.2e-35	59.84	GRR1-like protein 1	[more]
AT3G26810.1	1.4e-31	54.03	auxin signaling F-box 2	[more]
AT1G12820.1	1.2e-30	53.23	auxin signaling F-box 3	[more]
AT4G24390.2	4.6e-19	42.74	RNI-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 1..124 e-value: 5.1E-30 score: 106.2
None	No IPR available	PANTHER	PTHR16134:SF66	PROTEIN TRANSPORT INHIBITOR RESPONSE 1	coord: 1..123
None	No IPR available	PANTHER	PTHR16134	F-BOX/TPR REPEAT PROTEIN POF3	coord: 1..123
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 4..111

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C033147	MELO3C033147	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C033147.1:exon:250823	MELO3C033147.1:exon:250823	exon
MELO3C033147.1:exon:250824	MELO3C033147.1:exon:250824	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C033147.1:five_prime_utr	MELO3C033147.1:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C033147.1:cds	MELO3C033147.1:cds	CDS
MELO3C033147.1:cds	MELO3C033147.1:cds_2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C033147.1:three_prime_utr	MELO3C033147.1:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C033147.1	MELO3C033147.1-protein	polypeptide