MELO3C032595.jh1.t1 (mRNA) Melon (Harukei-3) v1.41

Overview


Name	MELO3C032595.jh1.t1
Type	mRNA
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	GDSL esterase/lipase
Location	chr07: 22469998 .. 22470304 (-)
Sequence length	307
RNA-Seq Expression	MELO3C032595.jh1.t1
Synteny	MELO3C032595.jh1.t1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAGGATTGGCACCTATTGGTTGTGCTCCAATCTACTTATGGTAGCACCGTAATGAGAATGGAGCGTGTATTGAAGAGATAAACAATATGATTATCGAGTTCAACTTTGCCATGAGATACATGGTCGAGGAGCTCAACACGGAGTTGCCCGATTCGAGTATAATCTTTTGTGATTTGCTTCAAGATTCAATGGATATCTTGAAGAATAATGAATATTATGGTGTGAATGACAATCTAACTTCTTTCACTCTCTTCACCATGATCCAAGTTTGTCTCTCATTGTGTTAGTCCCTTCTTTTCCATGTAG

mRNA sequence

ATAGGATTGGCACCTATTGGTTGTGCTCCAATCTACTTATGGTAGCACCGTAATGAGAATGGAGCGTGTATTGAAGAGATAAACAATATGATTATCGAGTTCAACTTTGCCATGAGATACATGGTCGAGGAGCTCAACACGGAGTTGCCCGATTCGAGTATAATCTTTTGTGATTTGCTTCAAGATTCAATGGATATCTTGAAGAATAATGAATATTATGGTGTGAATGACAATCTAACTTCTTTCACTCTCTTCACCATGATCCAAGTTTGTCTCTCATTGTGTTAGTCCCTTCTTTTCCATGTAG

Coding sequence (CDS)

ATGATTATCGAGTTCAACTTTGCCATGAGATACATGGTCGAGGAGCTCAACACGGAGTTGCCCGATTCGAGTATAATCTTTTGTGATTTGCTTCAAGATTCAATGGATATCTTGAAGAATAATGAATATTATGGTGTGAATGACAATCTAACTTCTTTCACTCTCTTCACCATGATCCAAGTTTGTCTCTCATTGTGTTAG

Protein sequence

MIIEFNFAMRYMVEELNTELPDSSIIFCDLLQDSMDILKNNEYYGVNDNLTSFTLFTMIQVCLSLC

Homology

[Close]

BLAST of MELO3C032595.jh1.t1 vs. NCBI nr
Match: KAA0044922.1 (GDSL esterase/lipase [Cucumis melo var. makuwa])

HSP 1 Score: 106 bits (265), Expect = 3.57e-28
Identity = 51/56 (91.07%), Postives = 53/56 (94.64%), Query Frame = 0


Query: 1  MIIEFNFAMRYMVEELNTELPDSSIIFCDLLQDSMDILKNNEYYGVNDNLTSFTLF 56
          M++EFNFAMRYMVEELNTELPDSSIIFCDLLQDSMDI KNNEYYGVNDNLTSF  F
Sbjct: 30 MVMEFNFAMRYMVEELNTELPDSSIIFCDLLQDSMDISKNNEYYGVNDNLTSFHSF 85

[Close]

BLAST of MELO3C032595.jh1.t1 vs. NCBI nr
Match: KAA0044894.1 (GDSL esterase/lipase [Cucumis melo var. makuwa] >TYK16577.1 GDSL esterase/lipase [Cucumis melo var. makuwa])

HSP 1 Score: 102 bits (255), Expect = 1.19e-26
Identity = 54/67 (80.60%), Postives = 58/67 (86.57%), Query Frame = 0


Query: 1  MIIEFNFAMRYMVEELNTELPDSSIIFCDLLQDSMDILKNNEYYGVNDNLTSF-TLFTMI 60
          M++EFNFAMRYMVEELNTELPDSSII CDLLQ SM+ILKNNEYYGVNDNLTSF TL    
Sbjct: 30 MVMEFNFAMRYMVEELNTELPDSSIILCDLLQYSMNILKNNEYYGVNDNLTSFHTLHHDP 89

Query: 61 QVCLSLC 66
           + LSLC
Sbjct: 90 NLSLSLC 96

[Close]

BLAST of MELO3C032595.jh1.t1 vs. NCBI nr
Match: XP_008452220.1 (PREDICTED: GDSL esterase/lipase At1g71691-like [Cucumis melo] >KAA0060544.1 GDSL esterase/lipase [Cucumis melo var. makuwa] >TYK00787.1 GDSL esterase/lipase [Cucumis melo var. makuwa])

HSP 1 Score: 84.7 bits (208), Expect = 2.77e-17
Identity = 39/47 (82.98%), Postives = 43/47 (91.49%), Query Frame = 0


Query: 1   MIIEFNFAMRYMVEELNTELPDSSIIFCDLLQDSMDILKNNEYYGVN 47
           M++EFNFAMRYMVEEL  ELPDSSIIFCDLL+ SMDILKN+EYYG N
Sbjct: 286 MVMEFNFAMRYMVEELGMELPDSSIIFCDLLEGSMDILKNHEYYGFN 332

[Close]

BLAST of MELO3C032595.jh1.t1 vs. NCBI nr
Match: XP_004145656.2 (GDSL esterase/lipase At1g71691 [Cucumis sativus] >KGN57733.1 hypothetical protein Csa_010616 [Cucumis sativus])

HSP 1 Score: 83.2 bits (204), Expect = 9.91e-17
Identity = 38/47 (80.85%), Postives = 43/47 (91.49%), Query Frame = 0


Query: 1   MIIEFNFAMRYMVEELNTELPDSSIIFCDLLQDSMDILKNNEYYGVN 47
           M++EFNFAMRY+VEEL  ELPDS+IIFCDLLQ SMDILKN+EYYG N
Sbjct: 284 MVMEFNFAMRYVVEELGMELPDSNIIFCDLLQGSMDILKNHEYYGFN 330

[Close]

BLAST of MELO3C032595.jh1.t1 vs. NCBI nr
Match: XP_038904573.1 (GDSL esterase/lipase At1g71691 [Benincasa hispida])

HSP 1 Score: 82.4 bits (202), Expect = 1.86e-16
Identity = 39/47 (82.98%), Postives = 42/47 (89.36%), Query Frame = 0


Query: 1   MIIEFNFAMRYMVEELNTELPDSSIIFCDLLQDSMDILKNNEYYGVN 47
           M++EFNFAMRYMVEEL  ELPDSSIIFCDLLQ SMDILKN+E YG N
Sbjct: 281 MVMEFNFAMRYMVEELGMELPDSSIIFCDLLQGSMDILKNHERYGFN 327

[Close]

BLAST of MELO3C032595.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5A7TNJ7 (GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002190 PE=4 SV=1)

HSP 1 Score: 106 bits (265), Expect = 1.73e-28
Identity = 51/56 (91.07%), Postives = 53/56 (94.64%), Query Frame = 0


Query: 1  MIIEFNFAMRYMVEELNTELPDSSIIFCDLLQDSMDILKNNEYYGVNDNLTSFTLF 56
          M++EFNFAMRYMVEELNTELPDSSIIFCDLLQDSMDI KNNEYYGVNDNLTSF  F
Sbjct: 30 MVMEFNFAMRYMVEELNTELPDSSIIFCDLLQDSMDISKNNEYYGVNDNLTSFHSF 85

[Close]

BLAST of MELO3C032595.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5A7TP35 (GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003990 PE=4 SV=1)

HSP 1 Score: 102 bits (255), Expect = 5.78e-27
Identity = 54/67 (80.60%), Postives = 58/67 (86.57%), Query Frame = 0


Query: 1  MIIEFNFAMRYMVEELNTELPDSSIIFCDLLQDSMDILKNNEYYGVNDNLTSF-TLFTMI 60
          M++EFNFAMRYMVEELNTELPDSSII CDLLQ SM+ILKNNEYYGVNDNLTSF TL    
Sbjct: 30 MVMEFNFAMRYMVEELNTELPDSSIILCDLLQYSMNILKNNEYYGVNDNLTSFHTLHHDP 89

Query: 61 QVCLSLC 66
           + LSLC
Sbjct: 90 NLSLSLC 96

[Close]

BLAST of MELO3C032595.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5A7UZU1 (GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00560 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.34e-17
Identity = 39/47 (82.98%), Postives = 43/47 (91.49%), Query Frame = 0


Query: 1   MIIEFNFAMRYMVEELNTELPDSSIIFCDLLQDSMDILKNNEYYGVN 47
           M++EFNFAMRYMVEEL  ELPDSSIIFCDLL+ SMDILKN+EYYG N
Sbjct: 286 MVMEFNFAMRYMVEELGMELPDSSIIFCDLLEGSMDILKNHEYYGFN 332

[Close]

BLAST of MELO3C032595.jh1.t1 vs. ExPASy TrEMBL
Match: A0A1S3BSQ9 (GDSL esterase/lipase At1g71691-like OS=Cucumis melo OX=3656 GN=LOC103493303 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.34e-17
Identity = 39/47 (82.98%), Postives = 43/47 (91.49%), Query Frame = 0


Query: 1   MIIEFNFAMRYMVEELNTELPDSSIIFCDLLQDSMDILKNNEYYGVN 47
           M++EFNFAMRYMVEEL  ELPDSSIIFCDLL+ SMDILKN+EYYG N
Sbjct: 286 MVMEFNFAMRYMVEELGMELPDSSIIFCDLLEGSMDILKNHEYYGFN 332

[Close]

BLAST of MELO3C032595.jh1.t1 vs. ExPASy TrEMBL
Match: A0A0A0L7F0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G270280 PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.80e-17
Identity = 38/47 (80.85%), Postives = 43/47 (91.49%), Query Frame = 0


Query: 1   MIIEFNFAMRYMVEELNTELPDSSIIFCDLLQDSMDILKNNEYYGVN 47
           M++EFNFAMRY+VEEL  ELPDS+IIFCDLLQ SMDILKN+EYYG N
Sbjct: 284 MVMEFNFAMRYVVEELGMELPDSNIIFCDLLQGSMDILKNHEYYGFN 330

[Close]

BLAST of MELO3C032595.jh1.t1 vs. TAIR 10
Match: AT4G10950.1 (SGNH hydrolase-type esterase superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 8.4e-12
Identity = 28/48 (58.33%), Postives = 40/48 (83.33%), Query Frame = 0


Query: 1   MIIEFNFAMRYMVEELNTELPDSSIIFCDLLQDSMDILKNNEYYGVND 49
           MI+E NF MRY V++LN ELP +SII+CD+ Q +MDIL+N+++YG N+
Sbjct: 283 MIMESNFVMRYTVDKLNRELPGASIIYCDVFQSAMDILRNHQHYGFNE 330

The following BLAST results are available for this feature:

BLAST of MELO3C032595.jh1.t1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044922.1	3.57e-28	91.07	GDSL esterase/lipase [Cucumis melo var. makuwa]	[more]
KAA0044894.1	1.19e-26	80.60	GDSL esterase/lipase [Cucumis melo var. makuwa] >TYK16577.1 GDSL esterase/lipase...	[more]
XP_008452220.1	2.77e-17	82.98	PREDICTED: GDSL esterase/lipase At1g71691-like [Cucumis melo] >KAA0060544.1 GDSL...	[more]
XP_004145656.2	9.91e-17	80.85	GDSL esterase/lipase At1g71691 [Cucumis sativus] >KGN57733.1 hypothetical protei...	[more]
XP_038904573.1	1.86e-16	82.98	GDSL esterase/lipase At1g71691 [Benincasa hispida]	[more]

BLAST of MELO3C032595.jh1.t1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C032595.jh1.t1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TNJ7	1.73e-28	91.07	GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G...	[more]
A0A5A7TP35	5.78e-27	80.60	GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G...	[more]
A0A5A7UZU1	1.34e-17	82.98	GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420...	[more]
A0A1S3BSQ9	1.34e-17	82.98	GDSL esterase/lipase At1g71691-like OS=Cucumis melo OX=3656 GN=LOC103493303 PE=3...	[more]
A0A0A0L7F0	4.80e-17	80.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G270280 PE=3 SV=1	[more]

BLAST of MELO3C032595.jh1.t1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10950.1	8.4e-12	58.33	SGNH hydrolase-type esterase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR45648:SF13	OS02G0290900 PROTEIN	coord: 1..48
None	No IPR available	PANTHER	PTHR45648	GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700)	coord: 1..48

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C032595.jh1	MELO3C032595.jh1	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C032595.jh1.t1.exon	MELO3C032595.jh1.t1.exon	exon

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C032595.jh1.t1.stop_codon	MELO3C032595.jh1.t1.stop_codon	stop_codon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C032595.jh1.t1.cds	MELO3C032595.jh1.t1.cds	CDS

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C032595.jh1.t1.start_codon	MELO3C032595.jh1.t1.start_codon	start_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C032595.jh1.t1	MELO3C032595.jh1.t1-protein	polypeptide