MELO3C032387.1 (mRNA) Melon (DHL92) v4

Overview
NameMELO3C032387.1
TypemRNA
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr07: 2145239 .. 2149136 (-)
Sequence length1119
RNA-Seq ExpressionMELO3C032387.1
SyntenyMELO3C032387.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTATTATGAGGTTGTCAAAATTGGTGAGCCTCAAAAGAGTTAGTAAGAAATAAAAAAAGGAGATTCTAATGTTAATTAAGCTCTAAAATGAGCGAATCAAATCCAATTTGGTTGTTGCTGAAAGTTTGTTATGATGAAATTATTCATCTTTGAGATGGGAAATATAGTACATGATTTTAATTTACACATTTCCAAATTAACCACGTTAGATTAGTTTAGTTGTTATATATGTATTATTAACTTAAATAATAAAGTCATCTGTAACGCCAATTTGAGGAATTTAATTTTATTATTTAAGTGTAATTTTGAGGATTTAGGTGTTATTTAAATATTGAAGTATTTTACTTTATGGAGATTTGTTTCTATTGGATATTTGAAAAATATCAAATTGTTGTTAAGTTGGAATTTATGTTTGTTTTGGTTATTTATGTTTAGATATTATTTGGCTTAAGGAATTAATAATTATATTGTGAAATAATATAGTTATTATGAAAAGATAGTTTGATAAGATAAAGATGATTGGATTGGTTGAGGAGAGAGAATTTGATTTTATTTGGGAAAAGATAAAAAGAAGATAAAAAGGGAGATTTTATGTGTTTTAAATGAAGTGAGAGAAGATTTGATTTGTTTTAGATTAGATTAAGGAAAAAGAAAGGGAAAATAATAATAAAGTTATTATTATTTTCCGTTAAATAGGTTCTTGGGAAGTATGTCATCATCTTCTTCACAAAAGAAAAGAAAAGAGAAACTCTAACTACTTGCAACCCGCCGCCGCTCCGCTGCCGCCGTCAGTTCGAACCGATCGGCTATATTCAAGTGCGTTGTCCCCAAGTTTGAAGACACGTCGCTCCACCGTAGCCGAACCGTTCGCAGTCGCCAGCCGTCACGTGAAGCTTCGTCGTGTCGTATCGTCGAGCAGCAGCAGCTGTCGCAAGTCCCAGTCGCGTCGTCCGTGAACTCCAGCCGCTCACACAGCCACGCCGTCGCAAGTCGCAGAGCCCTCCGTCTGTCGCACCACTGAACTCGCGCCCCCTTCTCCGGGAACCGAACCCGACCTGCGCCACCTGCTCCATCCGCCCGCGTGAGCCGCATGCGCCTTAGCCGAGCCGCACGCCTGCGCCTGCCTCCCAACCAAGCCGCCAAGCCATTTTTGACCCACCTGACCATTTTTATCCTTCTCCACTTGTTTTTGGGTAAGTTTTGATTGGGTTTTTAGCATACCCAACAAAGATTTAATTTTGGACTTTAAATAATTTAATTTTTGATTAAATTAAATTATTTTTCTTAAAAAGTTGTTGGATCATTAGAAGTGGAACTGATGAATTTCTAGGTTAAGGCTAAGTTTATCTCAACCTTAATCTTGGGTAAGTTACTTCAACTGAAATTGTGGACTTTAATTCTTGGAAGGATAAGTTATTAAATTGGTGTTTTCTAACTATTTAGGACGCTGCTGCTTGAAAAGCGTGATTTTACTGTTAGAATTTGATTGAGCAAATCTCCAGTTAAGAGATTCTACTACTAGACCCTCGAGTTTAATTTAAAGAGACCGCATGTATGAATGGTTATGTATTGATGATGGCTAGCTACAGAACTTGAGGTTACAGATAGAAACTGATATTGTAATTTTGACTGCGGGATGATTATGTGTTAGAGCTGATAATGCATTGATGGTATCACCTACGTTTTATTGATACAGTATTGTGATTGAGGATGATATGACATGATATGATAGGATATGTATGGTATGACATGTTATGGCATGATATGTTATGATGTGATTTGATGATGTGTTATGTGCATGCTATGGATATGGTGTATGTTAGCTTTACCTATTAGAGTCGTACCCACATGAGTGTTCTTCGGGATCACAACTCTTTTTGACGACTGTGTAGTCCAACGGAATCACCAGTCTGACATTAACATTGACACAGACATGATTTGAGCGATTCAACAGGATCACTCACAGCCCGATCGTCTTAGGTGTTCGCTTGGGTTCACCAACGACCAGCTTGTTCCTACGGGATCACAGATCATTGCACACGTTCGAGAACGTATCAGTTCGGGCACTCTTCAGGACTCTAATAGGAAGTTAACAGGCACCTAGCGAGACTAGTAGTGGGTCCCTTACTGAGTATTTTTATACTCACTCTTTCCATTTCTATTTTTCAGGGCAGAGGTAAGAGCAAAGGTAAGGTGGCGAATGACTAGAAGTGACTGTGGCGAGTCATAGGGATACGTTTGCTTCCGCTTAGGTCATGTGTCGGATTTCAGAGTTGATATTTCCTTTCATTTTATTCTATTTTATTTATTTCTTTGTTTTTCTTTCCCTTTAAAACTAGTAGGGCCCGAGATAGGATTTGTTTTAATTTATTTCCGTACATTCTATTTATGATTTTAACGACAATTCGCAGTTTTGTTTTATTTTCTATTTACTTTAAATAAATTTTAATTCTTTTCTTTTAAAGTAAAGTTCTCAACTTAGTATAAGAGGTTGGATCTTTACATCATCTAATAATTAGAATGAATATAGGAAAAAGTTTGGTGACTAATATTATTTTGTGTGTACTTACTTTCATGTTCATAGAAATTATATATCTTATAATAATATAAGATCACACAATATAAGATTTTACTATATTTGAATATACGAATTCATACTATGCTATTTATACAAATCTCACTTTTTTATATACTAAAATAAAATGACAAATTTCACGTGACGTGTTACTAACTAGTTAAAAAAAGAAAGTCTTTCGTACATCAACGTATTTCAAAAGATATTGTTTATCCCAGCAGTTGCTAAGACAACATACTTTAATATATTTACACTATAGTACACTGCTAACATTAGACATAACCATGGTGGTTTTGGTTTCAACCCTATCTCCACAATGGTATGTGCGTTTAAGATTGCGTACATAATTTGGTTTTGCTCTTACAATTATATAAAACAGCAAAGAGATGTGAATAAGATTCTGTTGTCCTTGATAAAATTCGAAAGCAAATCTTAAACCAAGAATAAGAATAAAGGTGCTAATTTAACCGCAATGGCCATAGTGATGTGCCGTTAAGCTTTTATTAGACAAAAGAAGATATGCTTTGAATGGAAGAACCCATCCTTCATGCATGAGAGCATATTTGGCTGTAAAAAATACTTTCGCAGTTTCTAACTTTTTATCTCCCGTACCATCCATTTTCTAGTTTTGAAAGGATTAAAAGGTGATTTTAAGCGCTAAAGTGTGACCAACTTTGGAGGAAGAGGCTCCAAATCTTTCGTGAATTTTAGGAAGTAGCAGAAGGATGTGGTAGTGCTAGAAATGATGTTGGGGTTGGGGATGGGGTTGGTGGTTGGTAATTTGAAAGCAAAGTTATTTCAGAGTTGTCTTTTGAGGTTTCATATATATCTTGAAAAACACACCATATATATTTGTTGGTTATTTTGCGAAGAAGATAAGAGTAATGGTTCAACGGGAGGAAGAGACCGCAATCATAAACTCAAAATCAGACTCAAGATTCGCCATAGTTTGAGGGAGAAGACAAATCTCTAAATCTACACTTCCTCCTCCCTCATATCCTGGATATGTAGTAACCTTGCCGTCCCATTTATTGGAATATCCACTCCGCAATGCAACAGCTTTTCCCATCCCAAATTCAATCCCATACTTGTTGAATCTCGGCGAGCTCCCCATCAACACAGTATTCGGTTCGAAAATTCTACCCACTTGTATTTTATCAATAGATTGCAACCGTTCCTCAATTGTCTCTCTAAACTTTTTGCAAGTGTTGTTCACCACAACATCGTGCAACTTCCATGCTGCCCAACCAAGATCTTTCCCAACCAACTCCTCTGCTTTTGCATCCACTTTCAGATATTTCATTACATTGCCGAAGTAA

mRNA sequence

ATGTGTATTATGAGGTTGTCAAAATTGGTGAGCCTCAAAAGAGTTAGTTCTTGGGAAGTATGTCATCATCTTCTTCACAAAAGAAAAGAAAAGAGAAACTCTAACTACTTGCAACCCGCCGCCGCTCCGCTGCCGCCGTCAGTTCGAACCGATCGGCTATATTCAAGTGCGTTGTCCCCAAGTTTGAAGACACGTCGCTCCACCGTAGCCGAACCGTTCGCAGTCGCCAGCCGTCACGTGAAGCTTCGTCGTGTCGTATCGTCGAGCAGCAGCAGCTGTCGCAAGTCCCAGTCGCGTCGTCCGTGAACTCCAGCCGCTCACACAGCCACGCCGTCGCAAGTCGCAGAGCCCTCCGTCTGTCGCACCACTGAACTCGCGCCCCCTTCTCCGGGAACCGAACCCGACCTGCGCCACCTGCTCCATCCGCCCGCGACGCTGCTGCTTGAAAAGCGTGATTTTACTGATCACTCACAGCCCGATCGTCTTAGGTGTTCGCTTGGGTTCACCAACGACCAGCTTGTTCCTACGGGATCACAGATCATTGCACACGTTCGAGAACGTATCAGTTCGGGCACTCTTCAGGACTCTAATAGGAAGGCAGAGGTAAGAGCAAAGTACACTGCTAACATTAGACATAACCATGGTGGTTTTGGTTTCAACCCTATCTCCACAATGGAAGTAGCAGAAGGATGTGGTAGTGCTAGAAATGATGTTGGGGTTGGGGATGGGGTTGGTGAAGATAAGAGTAATGGTTCAACGGGAGGAAGAGACCGCAATCATAAACTCAAAATCAGACTCAAGATTCGCCATATAACCTTGCCGTCCCATTTATTGGAATATCCACTCCGCAATGCAACAGCTTTTCCCATCCCAAATTCAATCCCATACTTGTTGAATCTCGGCGAGCTCCCCATCAACACAGTATTCGGTTCGAAAATTCTACCCACTTGTATTTTATCAATAGATTGCAACCGTTCCTCAATTGTCTCTCTAAACTTTTTGCAAGTGTTGTTCACCACAACATCGTGCAACTTCCATGCTGCCCAACCAAGATCTTTCCCAACCAACTCCTCTGCTTTTGCATCCACTTTCAGATATTTCATTACATTGCCGAAGTAA

Coding sequence (CDS)

ATGGAAGTAGCAGAAGGATGTGGTAGTGCTAGAAATGATGTTGGGGTTGGGGATGGGGTTGGTGAAGATAAGAGTAATGGTTCAACGGGAGGAAGAGACCGCAATCATAAACTCAAAATCAGACTCAAGATTCGCCATATAACCTTGCCGTCCCATTTATTGGAATATCCACTCCGCAATGCAACAGCTTTTCCCATCCCAAATTCAATCCCATACTTGTTGAATCTCGGCGAGCTCCCCATCAACACAGTATTCGGTTCGAAAATTCTACCCACTTGTATTTTATCAATAGATTGCAACCGTTCCTCAATTGTCTCTCTAAACTTTTTGCAAGTGTTGTTCACCACAACATCGTGCAACTTCCATGCTGCCCAACCAAGATCTTTCCCAACCAACTCCTCTGCTTTTGCATCCACTTTCAGATATTTCATTACATTGCCGAAGTAA

Protein sequence

MEVAEGCGSARNDVGVGDGVGEDKSNGSTGGRDRNHKLKIRLKIRHITLPSHLLEYPLRNATAFPIPNSIPYLLNLGELPINTVFGSKILPTCILSIDCNRSSIVSLNFLQVLFTTTSCNFHAAQPRSFPTNSSAFASTFRYFITLPK
Homology
[Close]
BLAST of MELO3C032387.1 vs. NCBI nr
Match: KYP42256.1 (hypothetical protein KK1_036345 [Cajanus cajan])

HSP 1 Score: 92.4 bits (228), Expect = 3.4e-15
Identity = 48/93 (51.61%), Postives = 58/93 (62.37%), Query Frame = 0 

Query: 47  ITLPSHLLEYPLRNATAFPIPNSIPYLLNLGELPINTVFGSKILPTCILSIDCNRSSIVS 106
           +T PS+LL YPL  ATAFPIPNS  Y LNLGELP  T +GS   P+  +  DC+ S    
Sbjct: 33  VTFPSNLLPYPLLAATAFPIPNSFAYTLNLGELPNTTQYGSNKRPSLNMKGDCSHSCRNC 92

Query: 107 LNFLQVLFTTTSCNFHAAQPRSFPTNSSAFAST 140
           +    + F T +CNFHA  P+SF TNS A  ST
Sbjct: 93  ITSPPLWFATVTCNFHAVHPKSFSTNSPALVST 125

[Close]
BLAST of MELO3C032387.1 vs. ExPASy TrEMBL
Match: A0A151RI57 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_036345 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.7e-15
Identity = 48/93 (51.61%), Postives = 58/93 (62.37%), Query Frame = 0 

Query: 47  ITLPSHLLEYPLRNATAFPIPNSIPYLLNLGELPINTVFGSKILPTCILSIDCNRSSIVS 106
           +T PS+LL YPL  ATAFPIPNS  Y LNLGELP  T +GS   P+  +  DC+ S    
Sbjct: 33  VTFPSNLLPYPLLAATAFPIPNSFAYTLNLGELPNTTQYGSNKRPSLNMKGDCSHSCRNC 92

Query: 107 LNFLQVLFTTTSCNFHAAQPRSFPTNSSAFAST 140
           +    + F T +CNFHA  P+SF TNS A  ST
Sbjct: 93  ITSPPLWFATVTCNFHAVHPKSFSTNSPALVST 125

The following BLAST results are available for this feature:
BLAST of MELO3C032387.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KYP42256.13.4e-1551.61hypothetical protein KK1_036345 [Cajanus cajan][more]
BLAST of MELO3C032387.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C032387.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A151RI571.7e-1551.61Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_036345 PE=4 SV=1[more]
BLAST of MELO3C032387.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C032387MELO3C032387gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C032387.1:exon:197415MELO3C032387.1:exon:197415exon
MELO3C032387.1:exon:197414MELO3C032387.1:exon:197414exon
MELO3C032387.1:exon:197413MELO3C032387.1:exon:197413exon
MELO3C032387.1:exon:197412MELO3C032387.1:exon:197412exon
MELO3C032387.1:exon:197411MELO3C032387.1:exon:197411exon
MELO3C032387.1:exon:197410MELO3C032387.1:exon:197410exon
MELO3C032387.1:exon:197409MELO3C032387.1:exon:197409exon
MELO3C032387.1:exon:197408MELO3C032387.1:exon:197408exon
MELO3C032387.1:exon:197407MELO3C032387.1:exon:197407exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C032387.1:cdsMELO3C032387.1:cdsCDS
MELO3C032387.1:cdsMELO3C032387.1:cds_2CDS
MELO3C032387.1:cdsMELO3C032387.1:cds_3CDS
MELO3C032387.1:cdsMELO3C032387.1:cds_4CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C032387.1:five_prime_utrMELO3C032387.1:five_prime_utrfive_prime_UTR
MELO3C032387.1:five_prime_utrMELO3C032387.1:five_prime_utr_2five_prime_UTR
MELO3C032387.1:five_prime_utrMELO3C032387.1:five_prime_utr_3five_prime_UTR
MELO3C032387.1:five_prime_utrMELO3C032387.1:five_prime_utr_4five_prime_UTR
MELO3C032387.1:five_prime_utrMELO3C032387.1:five_prime_utr_5five_prime_UTR
MELO3C032387.1:five_prime_utrMELO3C032387.1:five_prime_utr_6five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C032387.1MELO3C032387.1-proteinpolypeptide