MELO3C032171.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C032171.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	CACTA en-spm transposon protein
Location	chr06: 23565479 .. 23567601 (-)
Sequence length	1105
RNA-Seq Expression	MELO3C032171.1
Synteny	MELO3C032171.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGTCGGGAATACCCTTATTTCTGATGTGATAACGGGAATCTCCCGACATTTTCGTGCTGCTTTGGGAGATCCCCTTTTTAAACGTTTCAGTTCTGTTTTACACAGAACTGAAAACAAAAGGGAAAGAGAGAATAGAGAAACGAAGATTCGTCGTCGTCTGTTCCGTCGTCGTTGCCGTCCCTCGCCGTTCCGCCGTCGTCTGCCACCTTAGGTAAGTTTAAATATAAAGTTTGTTTAGTTTAAATATAAGTTTTAGGGTTTTCTTTTAAGAAAATTGTTTTAGGATTTTGTTTTAGAATAGATTTTTGTTTGTTAAATGTATTTTTGTATAGAATGTGTGTAATTTGTGGTTGAATTTAAATTTGAAGGGTTTACGATTTAGGATTTATAGTTAAATTGAAAATTGAATTAGGGGGGTTATAGTTAAATTGAAATTTGAAGGGGACGGGGTTATAGTTGAATTGAAATTTGAAGGGGGTTTAGTTAATTTGAAATTTGAAGGGGGTTATACTTAAATTAAAATTTGAAGGCGAGATTACTAGCTAAATTGAAATTTGAAGAGGAGTTACTAAGGGTTTCTTTGCAATAATATGCTTAGTAGTTGAATTCAGTTTTTATTAAATAATAAAGACACTTGTAAGCCTAATTAGTATATTCTAGCTAATATTTAGTTTAGTTGATAATTTAGATTATTTAGTTTAGTTGATAATTTAGATTATTTAGTTATTTTAATATTTTTTTGTAAGATCATGAATAATTTCCATTTGAATATCTTTGTTATTGATTTGAGATGGCTATCCTGCAGTTATGGTAGCCTTTTTTATTTTGGATTTGCTTCTGTTTGGGATGGTTTCAAGGGGTGGTAGTAGGATAGCTTGAAGTATTTTGTTGTTAATAATTAAGTTGTGTTGGCTATCCATGTAATAATTAGGTTGTTTTCTATGTTCACAGCCGTTATGTTATCGTCATACCCATGTAATAATTTTATGGAGACGGACGTTATGTTTCTCGAGTTTGAGGACAATTTAGATAACATCGCGGGAGGGTCGTCGTCCGTGTGGGCGACAATGCGGGTGAGTATAAGAATTTTCTTCATTTTAACTCGTGATTATTTCATGTTTTTTTTCTAACATTATATGTTATTATCGATTTATTGAGCAGAGTCTTCTTCTCAACAACCTGCGACTCCGACTCTTAGGAGACATGCGCAGTCTCAACTCTTGGAGTTTGAGCGCCACGTTACAATAAATGGGTGCATTCTGATGATGATCGCCCCTGGAGCAGAGAAGCCTGTTTCTCCACACACTGTTCGCTTCAGCCAGGCGATAGGCGTGTGCGTGCTAAAGATATTTCTTGTCTATTGCCTTAAATGGGCGGACGTTGGGGAGATAATACATTGAGGTCGTTAAAGGCAACCTCCAGGTAATTAAGTGCACTACACATTTATGATTTCATTTGAAACATATCTAAGTTTAACCAATCTAATATCTTATGTTTGTAATGTGTAGCGATTTTTTGTGCTTGATTTCAATGATCAAGCAACGAATAGGTTTGTTAAGCATCAGATGCTCACGACCTTTAAAGAGTTTCAGGTCGACTGTCACAGACACTTCAAAAAGTACAGCGACTTGGAGAAGGCTCGTGTCAACCTACCAAATGCATTGGTTGAACGTCATGAGGATTGGCACTTCCTCTACAACCACTATATGAGCTGTGCATTCTAGGTATTTGTCATGATTAATTATGATTTCAAGTTTTAATGTGTATAAGAAATAAACAATATAATTGTTTTCATGCAGGAGCAATCACGGACGAATAAGGCTACTAGACAGAAGCAGCCTTACAATCATAGTAGCGAGTCCAAGTCATTTCTAGAACGATAGTACGAGCTCGCTAAGAGAAAAGGAGAGTCGGTTGATCATGTGGAGTTGTTTCGGGAAACACACGTTTAAGCTGGGACGTTCGTGTTGCAGGCCGCAGAGGATGCGTATGTAAGTTATGCCCTTATTAATTATCCTCTTTCATTATATATTTTTGCACGTTACCTAACATAGTTTTTAAATTTGTTGTAAAATCAAATGCTGGAAATCCAATCCATGCTACCTTAGAGGGTAGTCA

mRNA sequence

ATGAGCGTCGGGAATACCCTTATTTCTGATGTGATAACGGGAATCTCCCGACATTTTCGTGCTGCTTTGGGAGATCCCCTTTTTAAACAACTGAAAACAAAAGGGAAAGAGAGAATAGAGAAACGAAGATTCGTCGTCGTCTGTTCCGTCGTCGTTGCCGTCCCTCGCCGTTCCGCCGTCGTCTGCCACCTTAGGGGGGTTATAGTTAAATTGAAATTTGAAGGGGACGGGGTTATAGTTGAATTGAAATTTGAAGGGGGTTTAGTTAATTTGAAATTTGAAGGGGCCGTTATGTTATCGTCATACCCATGTAATAATTTTATGGAGACGGACGTTATGTTTCTCGAGTTTGAGGACAATTTAGATAACATCGCGGGAGGGTCGTCGTCCGTGTGGGCGACAATGCGGGTGAAGTCTTCTTCTCAACAACCTGCGACTCCGACTCTTAGGAGACATGCGCAGTCTCAACTCTTGGAGTTTGAGCGCCACGTTACAATAAATGGGTGCATTCTGATGATGATCGCCCCTGGAGCAGAGAAGCCTGTTTCTCCACACACTGTTCGCTTCAGCCAGGCGATAGGCGTGTGCGTGCTAAAGATATTTCTTGTCTATTGCCTTAAATGGGCGGACCGATTTTTTGTGCTTGATTTCAATGATCAAGCAACGAATAGGTTTGTTAAGCATCAGATGCTCACGACCTTTAAAGAGTTTCAGGTCGACTGTCACAGACACTTCAAAAAGTACAGCGACTTGGAGAAGGCTCGTGTCAACCTACCAAATGCATTGGAGCAATCACGGACGAATAAGGCTACTAGACAGAAGCAGCCTTACAATCATAGTAGCGAGTCCAAGTCATTTCTAGAACGATAGTACGAGCTCGCTAAGAGAAAAGGAGAGTCGGTTGATCATGTGGAGTTGTTTCGGGAAACACACGTTTAAGCTGGGACGTTCGTGTTGCAGGCCGCAGAGGATGCGTATGTAAGTTATGCCCTTATTAATTATCCTCTTTCATTATATATTTTTGCACGTTACCTAACATAGTTTTTAAATTTGTTGTAAAATCAAATGCTGGAAATCCAATCCATGCTACCTTAGAGGGTAGTCA

Coding sequence (CDS)

ATGAGCGTCGGGAATACCCTTATTTCTGATGTGATAACGGGAATCTCCCGACATTTTCGTGCTGCTTTGGGAGATCCCCTTTTTAAACAACTGAAAACAAAAGGGAAAGAGAGAATAGAGAAACGAAGATTCGTCGTCGTCTGTTCCGTCGTCGTTGCCGTCCCTCGCCGTTCCGCCGTCGTCTGCCACCTTAGGGGGGTTATAGTTAAATTGAAATTTGAAGGGGACGGGGTTATAGTTGAATTGAAATTTGAAGGGGGTTTAGTTAATTTGAAATTTGAAGGGGCCGTTATGTTATCGTCATACCCATGTAATAATTTTATGGAGACGGACGTTATGTTTCTCGAGTTTGAGGACAATTTAGATAACATCGCGGGAGGGTCGTCGTCCGTGTGGGCGACAATGCGGGTGAAGTCTTCTTCTCAACAACCTGCGACTCCGACTCTTAGGAGACATGCGCAGTCTCAACTCTTGGAGTTTGAGCGCCACGTTACAATAAATGGGTGCATTCTGATGATGATCGCCCCTGGAGCAGAGAAGCCTGTTTCTCCACACACTGTTCGCTTCAGCCAGGCGATAGGCGTGTGCGTGCTAAAGATATTTCTTGTCTATTGCCTTAAATGGGCGGACCGATTTTTTGTGCTTGATTTCAATGATCAAGCAACGAATAGGTTTGTTAAGCATCAGATGCTCACGACCTTTAAAGAGTTTCAGGTCGACTGTCACAGACACTTCAAAAAGTACAGCGACTTGGAGAAGGCTCGTGTCAACCTACCAAATGCATTGGAGCAATCACGGACGAATAAGGCTACTAGACAGAAGCAGCCTTACAATCATAGTAGCGAGTCCAAGTCATTTCTAGAACGATAG

Protein sequence

MSVGNTLISDVITGISRHFRAALGDPLFKQLKTKGKERIEKRRFVVVCSVVVAVPRRSAVVCHLRGVIVKLKFEGDGVIVELKFEGGLVNLKFEGAVMLSSYPCNNFMETDVMFLEFEDNLDNIAGGSSSVWATMRVKSSSQQPATPTLRRHAQSQLLEFERHVTINGCILMMIAPGAEKPVSPHTVRFSQAIGVCVLKIFLVYCLKWADRFFVLDFNDQATNRFVKHQMLTTFKEFQVDCHRHFKKYSDLEKARVNLPNALEQSRTNKATRQKQPYNHSSESKSFLER

Homology

[Close]

BLAST of MELO3C032171.1 vs. NCBI nr
Match: KAA0048581.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK27169.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 325.9 bits (834), Expect = 3.6e-85
Identity = 176/234 (75.21%), Postives = 184/234 (78.63%), Query Frame = 0


Query: 29  KQLKTKGKERIEKRRFVVVCSVVVAVPRRSAVVCHLRGVIVKLKFEGDGVIVELKFEGGL 88
           ++LKTKGKERIEKRRF     VVVAVPRRSA VCHLR                       
Sbjct: 12  RELKTKGKERIEKRRF-----VVVAVPRRSAAVCHLR----------------------- 71

Query: 89  VNLKFEGAVMLSSYPCNNFMETDVMFLEFEDNLDNIAGGSSSVWATMRVKSSSQQPATPT 148
                  A+M SSYP NNFMETDVMFLEFEDNLDNIAGGSSSVWATMRV+SSSQ PATPT
Sbjct: 72  -LFSMFTAIMSSSYPRNNFMETDVMFLEFEDNLDNIAGGSSSVWATMRVRSSSQLPATPT 131

Query: 149 LRRHAQSQLLEFERHVTINGCILMMIAPGAEKPVSPHTVRFSQAIGVCVLKIFLVYCLKW 208
           LRRHAQSQLLE ERH+TINGCI MMI+PGAEKPVSPHT+RFSQAIGVCVLKIFL      
Sbjct: 132 LRRHAQSQLLELERHITINGCIPMMISPGAEKPVSPHTIRFSQAIGVCVLKIFL------ 191

Query: 209 ADRFFVLDFNDQATNRFVKHQMLTTFKEFQVDCHRHFKKYSDLEKARVNLPNAL 263
             RFFVLDFNDQATNRFV+HQMLTTFKEFQVDCHRHFKKYSDLEKARVNL NAL
Sbjct: 192 --RFFVLDFNDQATNRFVEHQMLTTFKEFQVDCHRHFKKYSDLEKARVNLLNAL 208

[Close]

BLAST of MELO3C032171.1 vs. NCBI nr
Match: KAA0053102.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK03318.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 265.0 bits (676), Expect = 7.6e-67
Identity = 172/313 (54.95%), Postives = 195/313 (62.30%), Query Frame = 0


Query: 9   SDVITGISRHFRAALGDPLFKQLKT--------KGKERIE-------KRRFVVVCSVVVA 68
           SD   GI R    A G+ LF +  +        +GKER         +RRF    +V   
Sbjct: 19  SDAFWGIFRRCGTASGNSLFNRFSSVFYITETKRGKERRSQEGKREIRRRFRRPSAV--- 78

Query: 69  VPRRS-AVVCHLR-GVIVKLKFEGDGVIVELKFEGGLVNLKFEGAVMLS--------SYP 128
           VP  S A VCH   G +  L       IV+L++           AVM++        SY 
Sbjct: 79  VPLSSLAAVCHFSYGSLFVLNI----FIVDLRWLSCSYGCVGYPAVMVASVVWRAIMSYR 138

Query: 129 CNNFMETDVMFLEFEDNLDNIAGGSSSVWATMRVKSSSQQPATPTLRRHAQSQLLEFERH 188
            +NFMETD +FL+FED+LDNIAGGSSSV        SS Q ATPT RR  QS+LLE E H
Sbjct: 139 RSNFMETDNIFLQFEDDLDNIAGGSSSVADN---TGSSSQQATPTPRRRVQSRLLELECH 198

Query: 189 VTINGCILMMIAPGAEKPVSPHTVRFSQAIGVCVLKIFLVYCLKWAD-------RFFVLD 248
           V ING I M IAPG EKP+S H VRFSQAIGVC+ K F V C KW D       R FVLD
Sbjct: 199 VAINGRIPMTIAPGEEKPISSHVVRFSQAIGVCLRKTFSVPCFKWVDVGREYIERLFVLD 258

Query: 249 FNDQATNRFVKHQMLTTFKEFQVDCHRHFKKYSDLEKARVNLPNALEQSRTNKATRQKQP 290
           FNDQA NRFV+HQMLTTFKEF+ DCHRHFKKYSD E+AR N PNALEQSRTNKATRQKQP
Sbjct: 259 FNDQAMNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALEQSRTNKATRQKQP 318

[Close]

BLAST of MELO3C032171.1 vs. NCBI nr
Match: KAA0060076.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 265.0 bits (676), Expect = 7.6e-67
Identity = 144/192 (75.00%), Postives = 157/192 (81.77%), Query Frame = 0


Query: 99  LSSYPCNNFMETDVMFLEFEDNLD-NIAGGSSSVWATMRVKSSSQQPATPTLRRHAQSQL 158
           + SY  +NFMETD MFL+FED+LD NIAGGSSSV      +SSSQQ AT T RR AQS+L
Sbjct: 48  IMSYRRSNFMETDDMFLQFEDDLDNNIAGGSSSV-GDNTAESSSQQ-ATLTPRRRAQSRL 107

Query: 159 LEFERHVTINGCILMMIAPGAEKPVSPHTVRFSQAIGVCVLKIFLVYCLKWADRFFVLDF 218
           LE ERHV ING I M IAPGAEKP+SPH VRFSQAIGVCV K F V CLKWADR FVLDF
Sbjct: 108 LELERHVAINGRIPMTIAPGAEKPISPHVVRFSQAIGVCVRKTFSVRCLKWADRLFVLDF 167

Query: 219 NDQATNRFVKHQMLTTFKEFQVDCHRHFKKYSDLEKARVNLPNALEQSRTNKATRQKQPY 278
            DQA NRFV+HQMLTTFK+F+ +CHRHFKKYSDLE AR N PNALEQSRTNKA +QKQ Y
Sbjct: 168 YDQAMNRFVEHQMLTTFKKFRANCHRHFKKYSDLEDARTNPPNALEQSRTNKAAKQKQSY 227

Query: 279 NHSSESKSFLER 290
           NHSS SKSFL+R
Sbjct: 228 NHSSGSKSFLQR 237

[Close]

BLAST of MELO3C032171.1 vs. NCBI nr
Match: TYK29029.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 262.7 bits (670), Expect = 3.8e-66
Identity = 145/227 (63.88%), Postives = 157/227 (69.16%), Query Frame = 0


Query: 97  VMLSSYPCNNFMETDVMFLEFEDNLDNIAGGSSSVWATMRVKSSSQQPATPTLRRHAQSQ 156
           +M SS+  NNFMETD MFLEFED+LDNIAG SSS+       SSSQQPATPTLRR  QS+
Sbjct: 560 IMSSSFRRNNFMETDAMFLEFEDDLDNIAGWSSSM-GENTTGSSSQQPATPTLRRRVQSR 619

Query: 157 LLEFERHVTINGCILMMIAPGAEKPVSPHTVRFSQAIGVCVLKIFLVYCLKWAD------ 216
           LLE ERHV ING I M IAPG EKP+SPH + F QAIGVCV K F V CLKWAD      
Sbjct: 620 LLELERHVAINGRIPMTIAPGVEKPISPHAIHFGQAIGVCVRKTFFVCCLKWADVGREYI 679

Query: 217 --------RFFVLDFNDQATNRFVKHQMLTTFKEFQVDCHRHFKKYSDLEKARVNLPNAL 276
                   R FVLDFNDQA NRFV+HQM TTFKEF +DCHRHFKKYSD E+AR N PNAL
Sbjct: 680 EVVKGDLQRLFVLDFNDQAMNRFVEHQMFTTFKEFWIDCHRHFKKYSDPEEARANPPNAL 739

Query: 277 --------------------EQSRTNKATRQKQPYNHSSESKSFLER 290
                               EQSRTNK+ RQKQPYNHSS SKSFL+R
Sbjct: 740 VGRHEDWHFLYDHYISHAFQEQSRTNKSARQKQPYNHSSGSKSFLQR 785

[Close]

BLAST of MELO3C032171.1 vs. NCBI nr
Match: KAA0056494.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 262.7 bits (670), Expect = 3.8e-66
Identity = 145/227 (63.88%), Postives = 157/227 (69.16%), Query Frame = 0


Query: 97  VMLSSYPCNNFMETDVMFLEFEDNLDNIAGGSSSVWATMRVKSSSQQPATPTLRRHAQSQ 156
           +M SS+  NNFMETD MFLEFED+LDNIAG SSS+       SSSQQPATPTLRR  QS+
Sbjct: 509 IMSSSFRRNNFMETDAMFLEFEDDLDNIAGWSSSM-GENTTGSSSQQPATPTLRRRVQSR 568

Query: 157 LLEFERHVTINGCILMMIAPGAEKPVSPHTVRFSQAIGVCVLKIFLVYCLKWAD------ 216
           LLE ERHV ING I M IAPG EKP+SPH + F QAIGVCV K F V CLKWAD      
Sbjct: 569 LLELERHVAINGRIPMTIAPGVEKPISPHAIHFGQAIGVCVRKTFFVCCLKWADVGREYI 628

Query: 217 --------RFFVLDFNDQATNRFVKHQMLTTFKEFQVDCHRHFKKYSDLEKARVNLPNAL 276
                   R FVLDFNDQA NRFV+HQM TTFKEF +DCHRHFKKYSD E+AR N PNAL
Sbjct: 629 EVVKGDLQRLFVLDFNDQAMNRFVEHQMFTTFKEFWIDCHRHFKKYSDPEEARANPPNAL 688

Query: 277 --------------------EQSRTNKATRQKQPYNHSSESKSFLER 290
                               EQSRTNK+ RQKQPYNHSS SKSFL+R
Sbjct: 689 VGRHEDWHFLYDHYISHAFQEQSRTNKSARQKQPYNHSSGSKSFLQR 734

[Close]

BLAST of MELO3C032171.1 vs. ExPASy TrEMBL
Match: A0A5A7U4T0 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold236G00170 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.7e-85
Identity = 176/234 (75.21%), Postives = 184/234 (78.63%), Query Frame = 0


Query: 29  KQLKTKGKERIEKRRFVVVCSVVVAVPRRSAVVCHLRGVIVKLKFEGDGVIVELKFEGGL 88
           ++LKTKGKERIEKRRF     VVVAVPRRSA VCHLR                       
Sbjct: 12  RELKTKGKERIEKRRF-----VVVAVPRRSAAVCHLR----------------------- 71

Query: 89  VNLKFEGAVMLSSYPCNNFMETDVMFLEFEDNLDNIAGGSSSVWATMRVKSSSQQPATPT 148
                  A+M SSYP NNFMETDVMFLEFEDNLDNIAGGSSSVWATMRV+SSSQ PATPT
Sbjct: 72  -LFSMFTAIMSSSYPRNNFMETDVMFLEFEDNLDNIAGGSSSVWATMRVRSSSQLPATPT 131

Query: 149 LRRHAQSQLLEFERHVTINGCILMMIAPGAEKPVSPHTVRFSQAIGVCVLKIFLVYCLKW 208
           LRRHAQSQLLE ERH+TINGCI MMI+PGAEKPVSPHT+RFSQAIGVCVLKIFL      
Sbjct: 132 LRRHAQSQLLELERHITINGCIPMMISPGAEKPVSPHTIRFSQAIGVCVLKIFL------ 191

Query: 209 ADRFFVLDFNDQATNRFVKHQMLTTFKEFQVDCHRHFKKYSDLEKARVNLPNAL 263
             RFFVLDFNDQATNRFV+HQMLTTFKEFQVDCHRHFKKYSDLEKARVNL NAL
Sbjct: 192 --RFFVLDFNDQATNRFVEHQMLTTFKEFQVDCHRHFKKYSDLEKARVNLLNAL 208

[Close]

BLAST of MELO3C032171.1 vs. ExPASy TrEMBL
Match: A0A5D3BWI7 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold566G00080 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 3.7e-67
Identity = 172/313 (54.95%), Postives = 195/313 (62.30%), Query Frame = 0


Query: 9   SDVITGISRHFRAALGDPLFKQLKT--------KGKERIE-------KRRFVVVCSVVVA 68
           SD   GI R    A G+ LF +  +        +GKER         +RRF    +V   
Sbjct: 19  SDAFWGIFRRCGTASGNSLFNRFSSVFYITETKRGKERRSQEGKREIRRRFRRPSAV--- 78

Query: 69  VPRRS-AVVCHLR-GVIVKLKFEGDGVIVELKFEGGLVNLKFEGAVMLS--------SYP 128
           VP  S A VCH   G +  L       IV+L++           AVM++        SY 
Sbjct: 79  VPLSSLAAVCHFSYGSLFVLNI----FIVDLRWLSCSYGCVGYPAVMVASVVWRAIMSYR 138

Query: 129 CNNFMETDVMFLEFEDNLDNIAGGSSSVWATMRVKSSSQQPATPTLRRHAQSQLLEFERH 188
            +NFMETD +FL+FED+LDNIAGGSSSV        SS Q ATPT RR  QS+LLE E H
Sbjct: 139 RSNFMETDNIFLQFEDDLDNIAGGSSSVADN---TGSSSQQATPTPRRRVQSRLLELECH 198

Query: 189 VTINGCILMMIAPGAEKPVSPHTVRFSQAIGVCVLKIFLVYCLKWAD-------RFFVLD 248
           V ING I M IAPG EKP+S H VRFSQAIGVC+ K F V C KW D       R FVLD
Sbjct: 199 VAINGRIPMTIAPGEEKPISSHVVRFSQAIGVCLRKTFSVPCFKWVDVGREYIERLFVLD 258

Query: 249 FNDQATNRFVKHQMLTTFKEFQVDCHRHFKKYSDLEKARVNLPNALEQSRTNKATRQKQP 290
           FNDQA NRFV+HQMLTTFKEF+ DCHRHFKKYSD E+AR N PNALEQSRTNKATRQKQP
Sbjct: 259 FNDQAMNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALEQSRTNKATRQKQP 318

[Close]

BLAST of MELO3C032171.1 vs. ExPASy TrEMBL
Match: A0A5A7V0R9 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold160G00450 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 3.7e-67
Identity = 144/192 (75.00%), Postives = 157/192 (81.77%), Query Frame = 0


Query: 99  LSSYPCNNFMETDVMFLEFEDNLD-NIAGGSSSVWATMRVKSSSQQPATPTLRRHAQSQL 158
           + SY  +NFMETD MFL+FED+LD NIAGGSSSV      +SSSQQ AT T RR AQS+L
Sbjct: 48  IMSYRRSNFMETDDMFLQFEDDLDNNIAGGSSSV-GDNTAESSSQQ-ATLTPRRRAQSRL 107

Query: 159 LEFERHVTINGCILMMIAPGAEKPVSPHTVRFSQAIGVCVLKIFLVYCLKWADRFFVLDF 218
           LE ERHV ING I M IAPGAEKP+SPH VRFSQAIGVCV K F V CLKWADR FVLDF
Sbjct: 108 LELERHVAINGRIPMTIAPGAEKPISPHVVRFSQAIGVCVRKTFSVRCLKWADRLFVLDF 167

Query: 219 NDQATNRFVKHQMLTTFKEFQVDCHRHFKKYSDLEKARVNLPNALEQSRTNKATRQKQPY 278
            DQA NRFV+HQMLTTFK+F+ +CHRHFKKYSDLE AR N PNALEQSRTNKA +QKQ Y
Sbjct: 168 YDQAMNRFVEHQMLTTFKKFRANCHRHFKKYSDLEDARTNPPNALEQSRTNKAAKQKQSY 227

Query: 279 NHSSESKSFLER 290
           NHSS SKSFL+R
Sbjct: 228 NHSSGSKSFLQR 237

[Close]

BLAST of MELO3C032171.1 vs. ExPASy TrEMBL
Match: A0A5D3E035 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G001440 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.8e-66
Identity = 145/227 (63.88%), Postives = 157/227 (69.16%), Query Frame = 0


Query: 97  VMLSSYPCNNFMETDVMFLEFEDNLDNIAGGSSSVWATMRVKSSSQQPATPTLRRHAQSQ 156
           +M SS+  NNFMETD MFLEFED+LDNIAG SSS+       SSSQQPATPTLRR  QS+
Sbjct: 560 IMSSSFRRNNFMETDAMFLEFEDDLDNIAGWSSSM-GENTTGSSSQQPATPTLRRRVQSR 619

Query: 157 LLEFERHVTINGCILMMIAPGAEKPVSPHTVRFSQAIGVCVLKIFLVYCLKWAD------ 216
           LLE ERHV ING I M IAPG EKP+SPH + F QAIGVCV K F V CLKWAD      
Sbjct: 620 LLELERHVAINGRIPMTIAPGVEKPISPHAIHFGQAIGVCVRKTFFVCCLKWADVGREYI 679

Query: 217 --------RFFVLDFNDQATNRFVKHQMLTTFKEFQVDCHRHFKKYSDLEKARVNLPNAL 276
                   R FVLDFNDQA NRFV+HQM TTFKEF +DCHRHFKKYSD E+AR N PNAL
Sbjct: 680 EVVKGDLQRLFVLDFNDQAMNRFVEHQMFTTFKEFWIDCHRHFKKYSDPEEARANPPNAL 739

Query: 277 --------------------EQSRTNKATRQKQPYNHSSESKSFLER 290
                               EQSRTNK+ RQKQPYNHSS SKSFL+R
Sbjct: 740 VGRHEDWHFLYDHYISHAFQEQSRTNKSARQKQPYNHSSGSKSFLQR 785

[Close]

BLAST of MELO3C032171.1 vs. ExPASy TrEMBL
Match: A0A5A7UMS8 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G002740 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.8e-66
Identity = 145/227 (63.88%), Postives = 157/227 (69.16%), Query Frame = 0


Query: 97  VMLSSYPCNNFMETDVMFLEFEDNLDNIAGGSSSVWATMRVKSSSQQPATPTLRRHAQSQ 156
           +M SS+  NNFMETD MFLEFED+LDNIAG SSS+       SSSQQPATPTLRR  QS+
Sbjct: 509 IMSSSFRRNNFMETDAMFLEFEDDLDNIAGWSSSM-GENTTGSSSQQPATPTLRRRVQSR 568

Query: 157 LLEFERHVTINGCILMMIAPGAEKPVSPHTVRFSQAIGVCVLKIFLVYCLKWAD------ 216
           LLE ERHV ING I M IAPG EKP+SPH + F QAIGVCV K F V CLKWAD      
Sbjct: 569 LLELERHVAINGRIPMTIAPGVEKPISPHAIHFGQAIGVCVRKTFFVCCLKWADVGREYI 628

Query: 217 --------RFFVLDFNDQATNRFVKHQMLTTFKEFQVDCHRHFKKYSDLEKARVNLPNAL 276
                   R FVLDFNDQA NRFV+HQM TTFKEF +DCHRHFKKYSD E+AR N PNAL
Sbjct: 629 EVVKGDLQRLFVLDFNDQAMNRFVEHQMFTTFKEFWIDCHRHFKKYSDPEEARANPPNAL 688

Query: 277 --------------------EQSRTNKATRQKQPYNHSSESKSFLER 290
                               EQSRTNK+ RQKQPYNHSS SKSFL+R
Sbjct: 689 VGRHEDWHFLYDHYISHAFQEQSRTNKSARQKQPYNHSSGSKSFLQR 734

The following BLAST results are available for this feature:

BLAST of MELO3C032171.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048581.1	3.6e-85	75.21	CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK27169.1 CACTA en-...	[more]
KAA0053102.1	7.6e-67	54.95	CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK03318.1 CACTA en-...	[more]
KAA0060076.1	7.6e-67	75.00	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYK29029.1	3.8e-66	63.88	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0056494.1	3.8e-66	63.88	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C032171.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C032171.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U4T0	1.7e-85	75.21	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3BWI7	3.7e-67	54.95	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7V0R9	3.7e-67	75.00	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3E035	1.8e-66	63.88	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7UMS8	1.8e-66	63.88	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]

BLAST of MELO3C032171.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..282
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..289

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C032171	MELO3C032171	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C032171.1:exon:182005	MELO3C032171.1:exon:182005	exon
MELO3C032171.1:exon:182004	MELO3C032171.1:exon:182004	exon
MELO3C032171.1:exon:182003	MELO3C032171.1:exon:182003	exon
MELO3C032171.1:exon:182002	MELO3C032171.1:exon:182002	exon
MELO3C032171.1:exon:182001	MELO3C032171.1:exon:182001	exon
MELO3C032171.1:exon:182000	MELO3C032171.1:exon:182000	exon
MELO3C032171.1:exon:181999	MELO3C032171.1:exon:181999	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C032171.1:three_prime_utr	MELO3C032171.1:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C032171.1:cds	MELO3C032171.1:cds	CDS
MELO3C032171.1:cds	MELO3C032171.1:cds_2	CDS
MELO3C032171.1:cds	MELO3C032171.1:cds_3	CDS
MELO3C032171.1:cds	MELO3C032171.1:cds_4	CDS
MELO3C032171.1:cds	MELO3C032171.1:cds_5	CDS
MELO3C032171.1:cds	MELO3C032171.1:cds_6	CDS
MELO3C032171.1:cds	MELO3C032171.1:cds_7	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C032171.1	MELO3C032171.1-protein	polypeptide