MELO3C031517.jh1.t1 (mRNA) Melon (Harukei-3) v1.41

Overview


Name	MELO3C031517.jh1.t1
Type	mRNA
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Protein Ycf2-like
Location	chr05: 24615889 .. 24618596 (-)
Sequence length	1035
RNA-Seq Expression	MELO3C031517.jh1.t1
Synteny	MELO3C031517.jh1.t1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAAGGGGAAGGGAGAAATCAAAACAAGGACAAGTGATCGGTTACGAGCAGCGGGGATCACTGGTTCTAGGAAATCATTGGCAACAGGAATTCAAAACCTATCGAGTTCTTCTGAGGAGGTACAAATGAATGTTTTCTGTAATTATAAACAAATTATAGATGTTTATATATTTTTCTATAAATGTCAGAGAACAGAAGATATCATGGCAGAAGGTTCCGGGGGCAAAAAAGAGAGTCCAGGAACTTCAAAAAAGAGGGTGAGAACTGAAACGAAAAAAGAGGAAGCCACTATCCAGAAGAAACAACGGATTAAGAGTTTGGTAAAGTGTAAATCTATTCTCCAATTACTTGTGGTCTATTAGGTTTCAAATAAGATTTTTATTTATATTGTTCCCTGTTTAGGTCTCGAGGAAGAGAGTTTATAGGGGGAAAGGTGAAGGAAAAAAACAAAAAGAGGTTGAAGGAAAGGTATAACCGTCATACATTTGTTATGGATGAATTATGTGCTATATAAATTAATTGTAAATTTGACAAAGAGGATGATACGGAAAGCGAAAGCGAAAAGGAGGACAAAGTACATGAAGAAGAAGAAGTGGAAGAAGATGAACAAGCTGAAGATCAAGAAGACGAAGAAAAACAATATGAAGAAGAACAGGATGAAGAAGAGGAAGGCGAGACTGCCGTGGGTGAAAATTCAAATTCATCGACGAGTGAGATATCCCCAGATACTAGGAAAAGGAGGAAGGCTAGAGAAAAGGGAAAGAAAGTAAGCAAGTAATTTCATATTGGTGTATGTTATTTTACATACATACCTCAAATTTTTGTTTTATAAACTAGGTGAAGGCTATTAAAAAGGAAAAAAAGGAAAGAGAAGATAGAAGGAGAAAGGGAAAAGCTCCAATGAATCTGGAGAAATCAGAGGTAACTATTTCTGTTGTCTGTCTGTAATTTAGATACTCTGTATTTGTCGTGTTGCAGATGTATTGTATGGTACTTTTGTTGTATGTGTTTTGTATTTGTGGCTTCTGTCTTTTGTATGTCGGGTAGTTGATTGTATGGGATGTAGTTAGTTACAGAGTATGTGTAAATTGGTAGTGAAAAGTATCAATGTTCTGTATGTTATTTTATATTGATAGTCTATTCAATTATATATGTTGGCTGTCTTTTATGTTTACAGTGTATTTATCGGTTTAATGCATATGAGATATGTGTGATAGATATATGTGTGGTTACTGATGATTTTTTCAAATCATGTTAGGACTCGGTCTACTTAATGTGTTCTGAAAGAAGAAACGAGCCTTTAAAAATCAATCTACACATTAAAAGCATAGTAATAGAGAAAATTAAGGAAAATTTTGGAGATAGGCTGATTAATAGGTTTAGGGAGGGGATATTTGGGCACTTTCTAAACCTCTCCATAACAAACCAATCTTCCCAATTGTTGTTGCACCTTATTCAGCGAATGTGCAAACCCAAATTGACTAGTCAGCTTCAGTTTCTAATAGGACGAAGGGTTCTGAGGTTTGGATTGAGAGAATTTGCACTTATAACAGGCCTAAAATGTCATGAGGTTCCTTATATTAACCATGAGGATATAAAAGGTGGTGGGCGGCTAAAAGGGGTATATTTTGAAAATCTTAAAACTGTGACGAGATAGTACTTGAATGTTATGCTCTATATAAGTACTGCTGGAACTGATGATGATAGGATAAAAATGGCCAAGCTGTACTTTCTGGAAAGTTTTTTGACCCCTAAACAAGAATGTCTAAGTGTAGATTGGGATCATATCATTATGGTAGATGATGATGAAGTATTTGATGGGTACCCGTGGGGTAGAGTTGCTTTTGAACTCTTAGTGGACTTCATGAATAGGGCCGTTTGTAGCAAGGGGCAAACGGGTATTTCTATGGGGGGTTTATTTTCCCCATTCTCGCTTGGGCTTACGAGGTAATCCCAACATTAAGTACTCCGCCCAACTTCTTTGCAACGAGGATTTCCAATGAAGTCCCTAGGATTATAAATTGGACAGCTGACACACAACCCAAATGGAAGGACTTAAAACAGAAAGTGTTCGATTCGCCAACGGTATGTAAATCTCGTAATTTGTAGTACTTCATATATTCATAATATTTTTGTTTATAGAGTATTTTGTTCATTTTTGAAACAGCTTGAAGTGTCTCTAATGCTGGCAACCCCAGATGAAGTGGGAATGCCATTCTTCGCACCATTCATCGAGACAGAAAAAGACATACTCAAAGAAGCAGAGGATGAGCTTCCAAAGACCAAGAATTCTGAACACATAGCCTCTGTTTCGTTGAATAGAGGCATGCCGTCTACAAGTGAGATTAATGTCTTGAGGAAAATGGTAGATAAGATTGAGATTAGCCAACAGAGGATGGAGACGAGTGTGGAAGGTCTTCTTGAGTTTCTTAAATATGTGGAGTTGAAAATGAATAATCGGTTTGAAGAACTAGTGCAGAAGATGAATGGAATAATGGAAGCAACAAAGAGTTATGAATTTATGGTAAGCATATTGTGTAGACTTTGATAATATGTGTATCTGGTTTGTATTTGTAAAGAATCTTAACAAATACAGTGTATCTGGTTGCAAAGAATCTTACCAAATACAGTGTATCTGGTTGTATTTGTTGTGTCGGGAGCACGGGCGTTTGAAGAGCACCTTGACAAGGTGGAGGAGGACTAA

mRNA sequence

ATGAAAAAGGGGAAGGGAGAAATCAAAACAAGGACAAGTGATCGGTTACGAGCAGCGGGGATCACTGGTTCTAGGAAATCATTGGCAACAGGAATTCAAAACCTATCGAGTTCTTCTGAGGAGAGAACAGAAGATATCATGGCAGAAGGTTCCGGGGGCAAAAAAGAGAGTCCAGGAACTTCAAAAAAGAGGGTCTCGAGGAAGAGAGTTTATAGGGGGAAAGGTGAAGGAAAAAAACAAAAAGAGGTTGAAGGAAAGGATGATACGGAAAGCGAAAGCGAAAAGGAGGACAAAGTACATGAAGAAGAAGAAGTGGAAGAAGATGAACAAGCTGAAGATCAAGAAGACGAAGAAAAACAATATGAAGAAGAACAGGATGAAGAAGAGGAAGGCGAGACTGCCGTGGGTGAAAATTCAAATTCATCGACGAGTGAGATATCCCCAGATACTAGGAAAAGGAGGAAGGCTAGAGAAAAGGGAAAGAAAGTGAAGGCTATTAAAAAGGAAAAAAAGGAAAGAGAAGATAGAAGGAGAAAGGGAAAAGCTCCAATGAATCTGGAGAAATCAGAGCTTGAAGTGTCTCTAATGCTGGCAACCCCAGATGAAGTGGGAATGCCATTCTTCGCACCATTCATCGAGACAGAAAAAGACATACTCAAAGAAGCAGAGGATGAGCTTCCAAAGACCAAGAATTCTGAACACATAGCCTCTGTTTCGTTGAATAGAGGCATGCCGTCTACAAGTGAGATTAATGTCTTGAGGAAAATGGTAGATAAGATTGAGATTAGCCAACAGAGGATGGAGACGAGTGTGGAAGGTCTTCTTGAGTTTCTTAAATATGTGGAGTTGAAAATGAATAATCGGTTTGAAGAACTAGTGCAGAAGATGAATGGAATAATGGAAGCAACAAAGAGTTATGAATTTATGTGTATCTGGTTGCAAAGAATCTTACCAAATACAGTGTATCTGGTTGTATTTGTTGTGTCGGGAGCACGGGCGTTTGAAGAGCACCTTGACAAGGTGGAGGAGGACTAA

Coding sequence (CDS)

ATGAAAAAGGGGAAGGGAGAAATCAAAACAAGGACAAGTGATCGGTTACGAGCAGCGGGGATCACTGGTTCTAGGAAATCATTGGCAACAGGAATTCAAAACCTATCGAGTTCTTCTGAGGAGAGAACAGAAGATATCATGGCAGAAGGTTCCGGGGGCAAAAAAGAGAGTCCAGGAACTTCAAAAAAGAGGGTCTCGAGGAAGAGAGTTTATAGGGGGAAAGGTGAAGGAAAAAAACAAAAAGAGGTTGAAGGAAAGGATGATACGGAAAGCGAAAGCGAAAAGGAGGACAAAGTACATGAAGAAGAAGAAGTGGAAGAAGATGAACAAGCTGAAGATCAAGAAGACGAAGAAAAACAATATGAAGAAGAACAGGATGAAGAAGAGGAAGGCGAGACTGCCGTGGGTGAAAATTCAAATTCATCGACGAGTGAGATATCCCCAGATACTAGGAAAAGGAGGAAGGCTAGAGAAAAGGGAAAGAAAGTGAAGGCTATTAAAAAGGAAAAAAAGGAAAGAGAAGATAGAAGGAGAAAGGGAAAAGCTCCAATGAATCTGGAGAAATCAGAGCTTGAAGTGTCTCTAATGCTGGCAACCCCAGATGAAGTGGGAATGCCATTCTTCGCACCATTCATCGAGACAGAAAAAGACATACTCAAAGAAGCAGAGGATGAGCTTCCAAAGACCAAGAATTCTGAACACATAGCCTCTGTTTCGTTGAATAGAGGCATGCCGTCTACAAGTGAGATTAATGTCTTGAGGAAAATGGTAGATAAGATTGAGATTAGCCAACAGAGGATGGAGACGAGTGTGGAAGGTCTTCTTGAGTTTCTTAAATATGTGGAGTTGAAAATGAATAATCGGTTTGAAGAACTAGTGCAGAAGATGAATGGAATAATGGAAGCAACAAAGAGTTATGAATTTATGTGTATCTGGTTGCAAAGAATCTTACCAAATACAGTGTATCTGGTTGTATTTGTTGTGTCGGGAGCACGGGCGTTTGAAGAGCACCTTGACAAGGTGGAGGAGGACTAA

Protein sequence

MKKGKGEIKTRTSDRLRAAGITGSRKSLATGIQNLSSSSEERTEDIMAEGSGGKKESPGTSKKRVSRKRVYRGKGEGKKQKEVEGKDDTESESEKEDKVHEEEEVEEDEQAEDQEDEEKQYEEEQDEEEEGETAVGENSNSSTSEISPDTRKRRKAREKGKKVKAIKKEKKEREDRRRKGKAPMNLEKSELEVSLMLATPDEVGMPFFAPFIETEKDILKEAEDELPKTKNSEHIASVSLNRGMPSTSEINVLRKMVDKIEISQQRMETSVEGLLEFLKYVELKMNNRFEELVQKMNGIMEATKSYEFMCIWLQRILPNTVYLVVFVVSGARAFEEHLDKVEED

Homology

[Close]

BLAST of MELO3C031517.jh1.t1 vs. NCBI nr
Match: KAA0050200.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 399 bits (1024), Expect = 1.55e-133
Identity = 277/466 (59.44%), Postives = 297/466 (63.73%), Query Frame = 0


Query: 1   MKKGKGEIKTRTSDRLRAAGITGSRKSLATGIQNLSSSSEERTEDIMAEGSGGKKESPGT 60
           MKK KGEIKTRTSDRLRA GITGSRKSLATGIQNLSSS EERTEDIMAEGSGGK++SPGT
Sbjct: 1   MKKEKGEIKTRTSDRLRATGITGSRKSLATGIQNLSSSFEERTEDIMAEGSGGKRKSPGT 60

Query: 61  SKKRVSRKRVYRGKGEGKKQKEVEGKDDTESESEKEDKVHEEEEVEEDEQAEDQEDEEKQ 120
           SKKRV R    + +   +K++ ++  DDTESE  KE+KVHEEEEV+EDEQAEDQEDEEKQ
Sbjct: 61  SKKRV-RTETKKEEATVQKKQRIKNLDDTESE--KEEKVHEEEEVKEDEQAEDQEDEEKQ 120

Query: 121 YEEEQDEEEEGETAVGENSNSSTSEISPDTRKRRKAREKGKKVKAIKKEKKEREDRRRKG 180
           YEEEQDEEEEGET VGE+SNSSTSEI PDTRKR KAREKGKKVKA+KKE+K REDRRRKG
Sbjct: 121 YEEEQDEEEEGETTVGEDSNSSTSEIPPDTRKRSKAREKGKKVKAVKKEEKAREDRRRKG 180

Query: 181 KAPMNLEKSE-------------------------------------------------- 240
           KAPMN EKSE                                                  
Sbjct: 181 KAPMNPEKSERMCKPKSTSQLQFLIGGRVLRFGLREFALITDLRCHEVPYINHEDIKGGG 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 RLKGQGANGYFYGGGFIFPILAWAYEVIPTLSTPPNFFATRISNEVPRIINWAADTQPKW 300

Query: 301 ------------LEVSLMLATPDEVGMPFFAPFIETEKDILKEAEDELPKTKNSEHIASV 344
                       LEVS MLATPDEVGMPFFAPFIETEKDILKEAEDEL KTKNS+HIASV
Sbjct: 301 KDLKQKVFDSPTLEVSSMLATPDEVGMPFFAPFIETEKDILKEAEDELRKTKNSDHIASV 360

[Close]

BLAST of MELO3C031517.jh1.t1 vs. NCBI nr
Match: TYJ98210.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 395 bits (1014), Expect = 7.46e-132
Identity = 278/478 (58.16%), Postives = 296/478 (61.92%), Query Frame = 0


Query: 1   MKKGKGEIKTRTSDRLRAAGITGSRKSLATGIQNLSSSSEERTEDIMAEGSGGKKESPGT 60
           MKK KGEIKTRTSDRLRA GITGSRKSLATGIQNLSSS EERTEDIMAEGSGGK++SPGT
Sbjct: 1   MKKEKGEIKTRTSDRLRATGITGSRKSLATGIQNLSSSFEERTEDIMAEGSGGKRKSPGT 60

Query: 61  SKKRVSRKRVYRGKGEGKKQKEVEGKDDTESESEKEDKVHEEEEVEEDEQAEDQEDEEKQ 120
           SKKRV R    + +   +K++ ++  DDTESE  KE+KVHEEEEV+EDEQAEDQEDEEKQ
Sbjct: 61  SKKRV-RTETKKEEATVQKKQRIKNLDDTESE--KEEKVHEEEEVKEDEQAEDQEDEEKQ 120

Query: 121 YEEEQDEEEEGETAVGENSNSSTSEISPDTRKRRKAREKGKKVKAIKKEKKEREDRRRKG 180
           YEEEQDEEEEGET VGE+SNSSTSEI PDTRKR KAREKGKKVKA+KKE+  REDRRRKG
Sbjct: 121 YEEEQDEEEEGETTVGEDSNSSTSEIPPDTRKRSKAREKGKKVKAVKKEENAREDRRRKG 180

Query: 181 KAPMNLEKSE-------------------------------------------------- 240
           KAPMN EKSE                                                  
Sbjct: 181 KAPMNPEKSERMCKPKSTSQLQFLIGGRVLRFGLREFALITDLRCHEVPYINHEDIKGGG 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 RLKGVYFENLKTVTRQYLNVMFNINWDHIIMVDDDKVFDGYPWDRVAFELLVDFMNRVVC 300

Query: 301 ------------------------LEVSLMLATPDEVGMPFFAPFIETEKDILKEAEDEL 344
                                   LEVS MLATPDEVGMPFFAPFIETEKDILKEAEDEL
Sbjct: 301 SKGQTADTQPKWKDLKQKVFDSPTLEVSSMLATPDEVGMPFFAPFIETEKDILKEAEDEL 360

[Close]

BLAST of MELO3C031517.jh1.t1 vs. NCBI nr
Match: KAA0035754.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 333 bits (854), Expect = 3.37e-107
Identity = 236/404 (58.42%), Postives = 244/404 (60.40%), Query Frame = 0


Query: 1   MKKGKGEIKTRTSDRLRAAGITGSRKSLATGIQNLSSSSEERTEDIMAEGSGGKKESPGT 60
           MKKG+GEIKTRTSDRLRAAGITGSRKSL TG QNLSSS EERTEDIMAEGSGGK+ESPGT
Sbjct: 1   MKKGRGEIKTRTSDRLRAAGITGSRKSLPTGFQNLSSSFEERTEDIMAEGSGGKRESPGT 60

Query: 61  SKKRV---------------------SRKRVYRGKGEGKKQKEVEGKDDTESESEKEDKV 120
           SK RV                     SRKRVYRGKG  KKQKEVEGK             
Sbjct: 61  SKNRVRTETKKEEATVQKKQRIKSLVSRKRVYRGKG--KKQKEVEGK------------- 120

Query: 121 HEEEEVEEDEQAEDQEDEEKQYEEEQDEEEEGETAVGENSNSSTSEISPDTRKRRKAREK 180
                                            TAVGE+SNSSTSEI PDTRKR KAREK
Sbjct: 121 ---------------------------------TAVGEDSNSSTSEIPPDTRKRSKAREK 180

Query: 181 GKKVKA---------------------------------IKKEKKE----REDRRRKGKA 240
           GKK  A                                 I  E         D + K K 
Sbjct: 181 GKKQGANGYFYGGFIFPILAWAYEVIPTLSTPPNFFATRISNEVPRIINWAADTQPKWKD 240

Query: 241 PMN--LEKSELEVSLMLATPDEVGMPFFAPFIETEKDILKEAEDELPKTKNSEHIASVSL 300
                 + S LEVS MLATPDEVGMPFFAPFIETEKDILKEAEDEL K KNS+HIASV L
Sbjct: 241 LKQKVFDSSTLEVSSMLATPDEVGMPFFAPFIETEKDILKEAEDELRKNKNSDHIASVLL 300

Query: 301 NRGMPSTSEINVLRKMVDKIEISQQRMETSVEGLLEFLKYVELKMNNRFEELVQKMNGIM 344
           NRGMPSTSEINVLRKMV+KIEISQQRMETSVEG LEFLK VELKMNNRFEELVQKMNGIM
Sbjct: 301 NRGMPSTSEINVLRKMVEKIEISQQRMETSVEGFLEFLKSVELKMNNRFEELVQKMNGIM 336

[Close]

BLAST of MELO3C031517.jh1.t1 vs. NCBI nr
Match: XP_008450225.1 (PREDICTED: protein Ycf2-like [Cucumis melo])

HSP 1 Score: 320 bits (820), Expect = 4.69e-103
Identity = 240/404 (59.41%), Postives = 261/404 (64.60%), Query Frame = 0


Query: 1   MKKGKGEIKTRTSDRLRAAGITGSRKSLATGIQNLSSSSEERTEDIMAEGSGGKKESPGT 60
           MKKGK + KTRTSD LRAAGITGSRKSL TGIQNLSSSSEERTE+IMAEGS GK+ESP T
Sbjct: 1   MKKGKRDAKTRTSDWLRAAGITGSRKSLTTGIQNLSSSSEERTENIMAEGSRGKRESPET 60

Query: 61  SKKRV---------------------SRKRVYRGKGEGKKQKEVEGKDDTESESEKEDKV 120
           SKKRV                     SR+RVYRGKGEG KQKEVEGK+DTESESEKEDKV
Sbjct: 61  SKKRVRTEMKKEEATVQKKQRIKSLVSRRRVYRGKGEGTKQKEVEGKEDTESESEKEDKV 120

Query: 121 HEEEEVEEDEQAEDQEDEEKQYEEEQDEEEEGETAVGENSNSSTSEISPDTRKRRKAREK 180
           HE+EEVEEDEQAEDQEDEEKQY+EE DEEEE ET VGE+SNS TSEI P+T+K +KAREK
Sbjct: 121 HEDEEVEEDEQAEDQEDEEKQYKEEHDEEEEVETPVGEDSNSLTSEIPPNTKKMKKAREK 180

Query: 181 GKKVKA---------------------IKKEKKEREDRRRKGKAPMNL------------ 240
           GKK  A                                R  G+ PM L            
Sbjct: 181 GKKQGANGYFDGGFIFLILAWAYEVIPTLSTPPNFFATRISGEVPMILNWAADTQPKWKD 240

Query: 241 ------EKSELEVSLMLATPDEVGMPFFAPFIETEKDILKEAEDELPKTKNSEHIASVSL 300
                 +   LEVS MLATP EV MPFFAPFIETEKDILKEAEDEL KTKNS+HIA VSL
Sbjct: 241 LKQKVFDSPTLEVSPMLATPTEVRMPFFAPFIETEKDILKEAEDELRKTKNSDHIAHVSL 300

Query: 301 NRGMPSTSEINVLRKMVDKIEISQQRMETSVEGLLEFLKYVELKMNNRFEELVQKMNGIM 344
           NRGMPSTSEINVLRKMV+KIE SQQRMET+VE                      +  GIM
Sbjct: 301 NRGMPSTSEINVLRKMVEKIENSQQRMETNVE----------------------EDEGIM 360

[Close]

BLAST of MELO3C031517.jh1.t1 vs. NCBI nr
Match: TYK27429.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 305 bits (781), Expect = 5.01e-96
Identity = 219/342 (64.04%), Postives = 239/342 (69.88%), Query Frame = 0


Query: 1   MKKGKGEIKTRTSDRLRAAGITGSRKSLATGIQNLSSSSEERTEDIMAEGSGGKKESPGT 60
           MKKGK + KTRTSD LRAAGITGSRKSL TGIQNLSSSSEERTE+IMAEGS GK+ESP T
Sbjct: 1   MKKGKRDAKTRTSDWLRAAGITGSRKSLTTGIQNLSSSSEERTENIMAEGSRGKRESPET 60

Query: 61  SKKRV---------------------SRKRVYRGKGEGKKQKEVEGKDDTESESEKEDKV 120
           SKKRV                     SR+RVYRGKGEG KQKEVEGK+DTESESEKEDKV
Sbjct: 61  SKKRVRTEMKKEEATVQKKQRIKSLVSRRRVYRGKGEGTKQKEVEGKEDTESESEKEDKV 120

Query: 121 HEEEEVEEDEQAEDQEDEEKQYEEEQDEEEEGETAVGENSNSSTSEISPDTRKRRKAREK 180
           HE+EEVEEDEQAEDQEDEEKQY+EE DEEEE ET VGE+SNS TSEI P+T+K +KAREK
Sbjct: 121 HEDEEVEEDEQAEDQEDEEKQYKEEHDEEEEVETPVGEDSNSLTSEIPPNTKKMKKAREK 180

Query: 181 GKKVKA---------------------IKKEKKEREDRRRKGKAPMNL------------ 240
           GKK  A                                R  G+ PM L            
Sbjct: 181 GKKQGANGYFDGGFIFLILAWAYEVIPTLSTPPNFFATRISGEVPMILNWAADTQPKWKD 240

Query: 241 ------EKSELEVSLMLATPDEVGMPFFAPFIETEKDILKEAEDELPKTKNSEHIASVSL 279
                 +   LEVS MLATP EV MPFFAPFIETEKDILKEAEDEL KTKNS+HIA VSL
Sbjct: 241 LKQKVFDSPTLEVSPMLATPTEVRMPFFAPFIETEKDILKEAEDELRKTKNSDHIAHVSL 300

[Close]

BLAST of MELO3C031517.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5A7U4J7 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold355G00310 PE=4 SV=1)

HSP 1 Score: 399 bits (1024), Expect = 7.52e-134
Identity = 277/466 (59.44%), Postives = 297/466 (63.73%), Query Frame = 0


Query: 1   MKKGKGEIKTRTSDRLRAAGITGSRKSLATGIQNLSSSSEERTEDIMAEGSGGKKESPGT 60
           MKK KGEIKTRTSDRLRA GITGSRKSLATGIQNLSSS EERTEDIMAEGSGGK++SPGT
Sbjct: 1   MKKEKGEIKTRTSDRLRATGITGSRKSLATGIQNLSSSFEERTEDIMAEGSGGKRKSPGT 60

Query: 61  SKKRVSRKRVYRGKGEGKKQKEVEGKDDTESESEKEDKVHEEEEVEEDEQAEDQEDEEKQ 120
           SKKRV R    + +   +K++ ++  DDTESE  KE+KVHEEEEV+EDEQAEDQEDEEKQ
Sbjct: 61  SKKRV-RTETKKEEATVQKKQRIKNLDDTESE--KEEKVHEEEEVKEDEQAEDQEDEEKQ 120

Query: 121 YEEEQDEEEEGETAVGENSNSSTSEISPDTRKRRKAREKGKKVKAIKKEKKEREDRRRKG 180
           YEEEQDEEEEGET VGE+SNSSTSEI PDTRKR KAREKGKKVKA+KKE+K REDRRRKG
Sbjct: 121 YEEEQDEEEEGETTVGEDSNSSTSEIPPDTRKRSKAREKGKKVKAVKKEEKAREDRRRKG 180

Query: 181 KAPMNLEKSE-------------------------------------------------- 240
           KAPMN EKSE                                                  
Sbjct: 181 KAPMNPEKSERMCKPKSTSQLQFLIGGRVLRFGLREFALITDLRCHEVPYINHEDIKGGG 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 RLKGQGANGYFYGGGFIFPILAWAYEVIPTLSTPPNFFATRISNEVPRIINWAADTQPKW 300

Query: 301 ------------LEVSLMLATPDEVGMPFFAPFIETEKDILKEAEDELPKTKNSEHIASV 344
                       LEVS MLATPDEVGMPFFAPFIETEKDILKEAEDEL KTKNS+HIASV
Sbjct: 301 KDLKQKVFDSPTLEVSSMLATPDEVGMPFFAPFIETEKDILKEAEDELRKTKNSDHIASV 360

[Close]

BLAST of MELO3C031517.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5D3BEG7 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G001070 PE=4 SV=1)

HSP 1 Score: 395 bits (1014), Expect = 3.61e-132
Identity = 278/478 (58.16%), Postives = 296/478 (61.92%), Query Frame = 0


Query: 1   MKKGKGEIKTRTSDRLRAAGITGSRKSLATGIQNLSSSSEERTEDIMAEGSGGKKESPGT 60
           MKK KGEIKTRTSDRLRA GITGSRKSLATGIQNLSSS EERTEDIMAEGSGGK++SPGT
Sbjct: 1   MKKEKGEIKTRTSDRLRATGITGSRKSLATGIQNLSSSFEERTEDIMAEGSGGKRKSPGT 60

Query: 61  SKKRVSRKRVYRGKGEGKKQKEVEGKDDTESESEKEDKVHEEEEVEEDEQAEDQEDEEKQ 120
           SKKRV R    + +   +K++ ++  DDTESE  KE+KVHEEEEV+EDEQAEDQEDEEKQ
Sbjct: 61  SKKRV-RTETKKEEATVQKKQRIKNLDDTESE--KEEKVHEEEEVKEDEQAEDQEDEEKQ 120

Query: 121 YEEEQDEEEEGETAVGENSNSSTSEISPDTRKRRKAREKGKKVKAIKKEKKEREDRRRKG 180
           YEEEQDEEEEGET VGE+SNSSTSEI PDTRKR KAREKGKKVKA+KKE+  REDRRRKG
Sbjct: 121 YEEEQDEEEEGETTVGEDSNSSTSEIPPDTRKRSKAREKGKKVKAVKKEENAREDRRRKG 180

Query: 181 KAPMNLEKSE-------------------------------------------------- 240
           KAPMN EKSE                                                  
Sbjct: 181 KAPMNPEKSERMCKPKSTSQLQFLIGGRVLRFGLREFALITDLRCHEVPYINHEDIKGGG 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 RLKGVYFENLKTVTRQYLNVMFNINWDHIIMVDDDKVFDGYPWDRVAFELLVDFMNRVVC 300

Query: 301 ------------------------LEVSLMLATPDEVGMPFFAPFIETEKDILKEAEDEL 344
                                   LEVS MLATPDEVGMPFFAPFIETEKDILKEAEDEL
Sbjct: 301 SKGQTADTQPKWKDLKQKVFDSPTLEVSSMLATPDEVGMPFFAPFIETEKDILKEAEDEL 360

[Close]

BLAST of MELO3C031517.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5A7SWP9 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00260 PE=4 SV=1)

HSP 1 Score: 333 bits (854), Expect = 1.63e-107
Identity = 236/404 (58.42%), Postives = 244/404 (60.40%), Query Frame = 0


Query: 1   MKKGKGEIKTRTSDRLRAAGITGSRKSLATGIQNLSSSSEERTEDIMAEGSGGKKESPGT 60
           MKKG+GEIKTRTSDRLRAAGITGSRKSL TG QNLSSS EERTEDIMAEGSGGK+ESPGT
Sbjct: 1   MKKGRGEIKTRTSDRLRAAGITGSRKSLPTGFQNLSSSFEERTEDIMAEGSGGKRESPGT 60

Query: 61  SKKRV---------------------SRKRVYRGKGEGKKQKEVEGKDDTESESEKEDKV 120
           SK RV                     SRKRVYRGKG  KKQKEVEGK             
Sbjct: 61  SKNRVRTETKKEEATVQKKQRIKSLVSRKRVYRGKG--KKQKEVEGK------------- 120

Query: 121 HEEEEVEEDEQAEDQEDEEKQYEEEQDEEEEGETAVGENSNSSTSEISPDTRKRRKAREK 180
                                            TAVGE+SNSSTSEI PDTRKR KAREK
Sbjct: 121 ---------------------------------TAVGEDSNSSTSEIPPDTRKRSKAREK 180

Query: 181 GKKVKA---------------------------------IKKEKKE----REDRRRKGKA 240
           GKK  A                                 I  E         D + K K 
Sbjct: 181 GKKQGANGYFYGGFIFPILAWAYEVIPTLSTPPNFFATRISNEVPRIINWAADTQPKWKD 240

Query: 241 PMN--LEKSELEVSLMLATPDEVGMPFFAPFIETEKDILKEAEDELPKTKNSEHIASVSL 300
                 + S LEVS MLATPDEVGMPFFAPFIETEKDILKEAEDEL K KNS+HIASV L
Sbjct: 241 LKQKVFDSSTLEVSSMLATPDEVGMPFFAPFIETEKDILKEAEDELRKNKNSDHIASVLL 300

Query: 301 NRGMPSTSEINVLRKMVDKIEISQQRMETSVEGLLEFLKYVELKMNNRFEELVQKMNGIM 344
           NRGMPSTSEINVLRKMV+KIEISQQRMETSVEG LEFLK VELKMNNRFEELVQKMNGIM
Sbjct: 301 NRGMPSTSEINVLRKMVEKIEISQQRMETSVEGFLEFLKSVELKMNNRFEELVQKMNGIM 336

[Close]

BLAST of MELO3C031517.jh1.t1 vs. ExPASy TrEMBL
Match: A0A1S3BNT0 (protein Ycf2-like OS=Cucumis melo OX=3656 GN=LOC103491885 PE=4 SV=1)

HSP 1 Score: 320 bits (820), Expect = 2.27e-103
Identity = 240/404 (59.41%), Postives = 261/404 (64.60%), Query Frame = 0


Query: 1   MKKGKGEIKTRTSDRLRAAGITGSRKSLATGIQNLSSSSEERTEDIMAEGSGGKKESPGT 60
           MKKGK + KTRTSD LRAAGITGSRKSL TGIQNLSSSSEERTE+IMAEGS GK+ESP T
Sbjct: 1   MKKGKRDAKTRTSDWLRAAGITGSRKSLTTGIQNLSSSSEERTENIMAEGSRGKRESPET 60

Query: 61  SKKRV---------------------SRKRVYRGKGEGKKQKEVEGKDDTESESEKEDKV 120
           SKKRV                     SR+RVYRGKGEG KQKEVEGK+DTESESEKEDKV
Sbjct: 61  SKKRVRTEMKKEEATVQKKQRIKSLVSRRRVYRGKGEGTKQKEVEGKEDTESESEKEDKV 120

Query: 121 HEEEEVEEDEQAEDQEDEEKQYEEEQDEEEEGETAVGENSNSSTSEISPDTRKRRKAREK 180
           HE+EEVEEDEQAEDQEDEEKQY+EE DEEEE ET VGE+SNS TSEI P+T+K +KAREK
Sbjct: 121 HEDEEVEEDEQAEDQEDEEKQYKEEHDEEEEVETPVGEDSNSLTSEIPPNTKKMKKAREK 180

Query: 181 GKKVKA---------------------IKKEKKEREDRRRKGKAPMNL------------ 240
           GKK  A                                R  G+ PM L            
Sbjct: 181 GKKQGANGYFDGGFIFLILAWAYEVIPTLSTPPNFFATRISGEVPMILNWAADTQPKWKD 240

Query: 241 ------EKSELEVSLMLATPDEVGMPFFAPFIETEKDILKEAEDELPKTKNSEHIASVSL 300
                 +   LEVS MLATP EV MPFFAPFIETEKDILKEAEDEL KTKNS+HIA VSL
Sbjct: 241 LKQKVFDSPTLEVSPMLATPTEVRMPFFAPFIETEKDILKEAEDELRKTKNSDHIAHVSL 300

Query: 301 NRGMPSTSEINVLRKMVDKIEISQQRMETSVEGLLEFLKYVELKMNNRFEELVQKMNGIM 344
           NRGMPSTSEINVLRKMV+KIE SQQRMET+VE                      +  GIM
Sbjct: 301 NRGMPSTSEINVLRKMVEKIENSQQRMETNVE----------------------EDEGIM 360

[Close]

BLAST of MELO3C031517.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5D3DVJ7 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G001240 PE=4 SV=1)

HSP 1 Score: 305 bits (781), Expect = 2.43e-96
Identity = 219/342 (64.04%), Postives = 239/342 (69.88%), Query Frame = 0


Query: 1   MKKGKGEIKTRTSDRLRAAGITGSRKSLATGIQNLSSSSEERTEDIMAEGSGGKKESPGT 60
           MKKGK + KTRTSD LRAAGITGSRKSL TGIQNLSSSSEERTE+IMAEGS GK+ESP T
Sbjct: 1   MKKGKRDAKTRTSDWLRAAGITGSRKSLTTGIQNLSSSSEERTENIMAEGSRGKRESPET 60

Query: 61  SKKRV---------------------SRKRVYRGKGEGKKQKEVEGKDDTESESEKEDKV 120
           SKKRV                     SR+RVYRGKGEG KQKEVEGK+DTESESEKEDKV
Sbjct: 61  SKKRVRTEMKKEEATVQKKQRIKSLVSRRRVYRGKGEGTKQKEVEGKEDTESESEKEDKV 120

Query: 121 HEEEEVEEDEQAEDQEDEEKQYEEEQDEEEEGETAVGENSNSSTSEISPDTRKRRKAREK 180
           HE+EEVEEDEQAEDQEDEEKQY+EE DEEEE ET VGE+SNS TSEI P+T+K +KAREK
Sbjct: 121 HEDEEVEEDEQAEDQEDEEKQYKEEHDEEEEVETPVGEDSNSLTSEIPPNTKKMKKAREK 180

Query: 181 GKKVKA---------------------IKKEKKEREDRRRKGKAPMNL------------ 240
           GKK  A                                R  G+ PM L            
Sbjct: 181 GKKQGANGYFDGGFIFLILAWAYEVIPTLSTPPNFFATRISGEVPMILNWAADTQPKWKD 240

Query: 241 ------EKSELEVSLMLATPDEVGMPFFAPFIETEKDILKEAEDELPKTKNSEHIASVSL 279
                 +   LEVS MLATP EV MPFFAPFIETEKDILKEAEDEL KTKNS+HIA VSL
Sbjct: 241 LKQKVFDSPTLEVSPMLATPTEVRMPFFAPFIETEKDILKEAEDELRKTKNSDHIAHVSL 300

The following BLAST results are available for this feature:

BLAST of MELO3C031517.jh1.t1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050200.1	1.55e-133	59.44	protein Ycf2-like [Cucumis melo var. makuwa]	[more]
TYJ98210.1	7.46e-132	58.16	protein Ycf2-like [Cucumis melo var. makuwa]	[more]
KAA0035754.1	3.37e-107	58.42	protein Ycf2-like [Cucumis melo var. makuwa]	[more]
XP_008450225.1	4.69e-103	59.41	PREDICTED: protein Ycf2-like [Cucumis melo]	[more]
TYK27429.1	5.01e-96	64.04	protein Ycf2-like [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C031517.jh1.t1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C031517.jh1.t1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U4J7	7.52e-134	59.44	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold355G00...	[more]
A0A5D3BEG7	3.61e-132	58.16	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00...	[more]
A0A5A7SWP9	1.63e-107	58.42	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00...	[more]
A0A1S3BNT0	2.27e-103	59.41	protein Ycf2-like OS=Cucumis melo OX=3656 GN=LOC103491885 PE=4 SV=1	[more]
A0A5D3DVJ7	2.43e-96	64.04	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G00...	[more]

BLAST of MELO3C031517.jh1.t1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 212..232
None	No IPR available	COILS	Coil	Coil	coord: 104..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..60

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C031517.jh1	MELO3C031517.jh1	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C031517.jh1.t1.exon	MELO3C031517.jh1.t1.exon	exon
MELO3C031517.jh1.t1.exon	MELO3C031517.jh1.t1.exon_2	exon
MELO3C031517.jh1.t1.exon	MELO3C031517.jh1.t1.exon_3	exon
MELO3C031517.jh1.t1.exon	MELO3C031517.jh1.t1.exon_4	exon
MELO3C031517.jh1.t1.exon	MELO3C031517.jh1.t1.exon_5	exon
MELO3C031517.jh1.t1.exon	MELO3C031517.jh1.t1.exon_6	exon
MELO3C031517.jh1.t1.exon	MELO3C031517.jh1.t1.exon_7	exon

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C031517.jh1.t1.stop_codon	MELO3C031517.jh1.t1.stop_codon	stop_codon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C031517.jh1.t1.cds	MELO3C031517.jh1.t1.cds	CDS
MELO3C031517.jh1.t1.cds	MELO3C031517.jh1.t1.cds_2	CDS
MELO3C031517.jh1.t1.cds	MELO3C031517.jh1.t1.cds_3	CDS
MELO3C031517.jh1.t1.cds	MELO3C031517.jh1.t1.cds_4	CDS
MELO3C031517.jh1.t1.cds	MELO3C031517.jh1.t1.cds_5	CDS
MELO3C031517.jh1.t1.cds	MELO3C031517.jh1.t1.cds_6	CDS
MELO3C031517.jh1.t1.cds	MELO3C031517.jh1.t1.cds_7	CDS

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C031517.jh1.t1.start_codon	MELO3C031517.jh1.t1.start_codon	start_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C031517.jh1.t1	MELO3C031517.jh1.t1-protein	polypeptide