MELO3C029752.jh1.t1 (mRNA) Melon (Harukei-3) v1.41

Overview
NameMELO3C029752.jh1.t1
TypemRNA
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr02: 23001330 .. 23004540 (-)
Sequence length1570
RNA-Seq ExpressionMELO3C029752.jh1.t1
SyntenyMELO3C029752.jh1.t1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTAATCTAAGGAGAGTGAAAGGTTTTTCTTTTCAAACTTTTATTTCTAAATAAAAGTTGCATTAATTAGTCAAAAGTCAAAGCTTCGATTTAGTCTCCCTCAGTCCCCTTATCTCATCCTCCTCCCCGAAGGGTTGCCTATGAATCAATCAAGAAGCCATGGAAGATTACAGGACCTTGCTGGAAATTACGGCCCATTTCACTTATGCCCTAATACGGCGGCGCCGAGTTCATGGCGGTATCCCGGTAGAGAAGGTATCGGAAGCATCGGAGGTGGAATTTTCATTGTCCTTAACAAATAGCGCTTCTTGTTGTATGCTTTTGATTGTTTTTGTCTTTGTAGTGTAAAGTAGTAGGAATTGATTCAACATCTTTTTACGTTTGTTTGTTTCTGTGTGTTTGAATTATGTTCTAGGATGAACCAGTACAATCCCTCTCTAAACCAATCGGAATTTAGGGCAGTTATCTAAGAGATTTATACCCTTTTTTTCCAGCCCACAGATTTTATATCATTTAGGTACTCTGTGTATGTTTGTTTCTGTAGTTTTTCTTTTGTTGTGTAGGTTTATAGGAATTGTTTTTCCTTCTGCTTCTTTTAAATATGGTGGCATGTATCTTCTCAAAATGGAGATTTAGCTATTAGTACTTCTGTTAATAACTATTACTTTGTCAGTCATAGACAAAGAATGTATGCTTTACTTAACATGGGAACAAACATTTAGTTTTTCTTATCACAGCATTAATCAGTTATGGTGTTGGAACGGTCAAGCTTGAATTGAAAATGTAGTTTTTTTTTTTTTTTTTAATTATATGGACTGCAGATTGAACCAACCATGTCATCTGGTTGGTTCCTTGGTGGTTTGCTAATTCCTGCCCATGCTTATTGTTTTGTTGCTTGCATGTTTATGGTTTCCTATTGCTTGAAATTTACCTGGTTTGAATTAAATCTCTTTGTTTACGTGTTGTCAATCATAGCTTGGGAACTTAATCTTAAGCTCCCACATGACTTCGGACCAGAATAATTTGGATCATACTTGTATTTTCTGAACATGTGATTAATCATTTTAATTTCGTTTCACTGAATAAACTATGTCTTTCTATTTAGCTCGTACATTTATAGCTTGGAGCTGGGGCTCATGGGTGATTGATTTAATCGTTTTTATCATTTACTTGCGAGTTCTATTTTTGCTACAAGAAAAATTACGTTTGCAATATTGATTCTCTATGCTTCACAGGAAATCTTGTTTGAGATTTGGTTTCATTGATTAGCACCTTGCATTAGAACCATGGGTCCATGCTTATTATATTTCTTGACCATGAAGCTCTCCTTGCAGTCAGTATGCTTTCTCATTACTTGAGAGCTCAGTTAAGAAATACGTCATTCCAGTCGATCCTAATTCTTGAGCAAGGAAAAAATGTGCAAGATTAGAGAGTTACTCATTCGTACTGCAAAGACAATTATTTAGAAGTTGGATTTTTAGTTCACCTGGTCGAAGGTATTTTAAACAACTATGAGATACTAAACCAAAATAATTAATTAGATATGGCACCATTCTGTGAAGAATTGATATGTCTTTCTGTTGTTAACAGATATTGATACTATCAAAGTCAGTTCCACTTTGCCTGCATAATTTGTTTCAACAAAAGGCAGCCTAACAATGTTATTGACTTGGTGTGTTTTTATAGCCTTTTAAGTAAATGTATGTTTCTTTTATCCGTTGAAGTTTCGTTTCTCAATGATGTACCACTTTTTGTTATTAGGTATGCAAAGTAGTAAAAAGATCAACCTTCTTCACTAGTTCACTTATTGTTCTCCTGCTTTGTCTTTTGTTTGGCCGCACTTGAGGTAGAATTAATATATATGATCGAGGTGTGCAAATGTAAAAGTTATCATCACATTTTGTATATCTGATTCCCTCTTTTTAATGACTGTGTTTACTTAAATTCCTAATATAACAGGACAGCAAGAAACCATGGGTGGCATGCGGTTTGCTCTGCCGAGGCACCAGATTAGATTAACTTAACCTCCCTCGTCGGATGCCTAGAAAGAGATCCGAATGAATGCACGAGGAAATCACCCTAATGCCAGAGCATTTGTCAACTGCTTGAATGTACATTGGAAACCAAACAAAAATTTTCATACTTTTTTAATAGCATAATGAGATGTTTGGAAGCGATTTTTAAATGGTTAAAATCATTTTGCATTTTAAAATAACTTGAAAAATGCTTTTAATATCAAAATCAATTTTATAGTATGAAAAATGCTTTCTATTGAATTGATTTTGAGTAATTAAAAATGCGTTTCAAAGTAAATTTAAATAGGAAAAAGGAGATTTTAGCCATTTCAAAAACACTTCCAAGTAGCTGAGGATAATTGATTTGAACTCATAACTTGTAGATCCTCCTCAGCTTCTGACTGTTGGGCTAATCTTTGATGGTTTATGCTTGTCTATTTTGAATTTATTGACCTCTCACTTATTTCTTTTCTGCATCTCTAAATCTGTGCTAAAAGAGTCATAATTGTTGTATCTTAACCGGAACAGATTTTAGTTTCCTGAAAAGCAAAAAAGAGAAAAGGGAGAAGATCACCGCAGAAATAATCAGAATTAAAGGAAGTTTCTGTCTACCAACATTGATAGCCATTACTTTCAATCATACGAATGGTAAGTGTGAACTCTACGATTGACCTTGATGCAAACTTTACGTCTGATCTTGACATGATTTATTAATTTGATGGCTCATCTTCAGTTCAATCATTTGAGAGAACAAAAGAAGTTTGCTTGGTTGAGAGGATTCAAAGGCCTGGGTTGATGCCAAATATTACATTCCTAGGAGGTTGACGTCCAACCAACCCCGGGGTCATTTAAGAGCATGACGGTACAGCTCTGGCTCCATCTCTTCCTTGTCATTGATGTAAGAGTCCGTTTTCATTGCTATCACCAGATGAGAAGGTTTGTGTGTGTGGCTGACAATTCTTTGTTTATCTTGGGCTTCAGTTTCCATCTTCTTTGTACTAAGTTATGATTCTTAGTGTTCAGTATATGGATCATCTCCCATAACAGATCATTCTTTACCTTGTTTGTTGTTCTCTTTAATATTGTTTAGAATGAAATCACCATGAATTGGCTTGAGTAATGAAAAAAAAAAAGGAAAGATAAAGCAATCTATAGGATATGAGTTCAGAATCCCATATATCGAAAAGATCAAC

mRNA sequence

ATGTCTAATCTAAGGAGAGTGAAAGGTTTTTCTTTTCAAACTTTTATTTCTAAATAAAAGTTGCATTAATTAGTCAAAAGTCAAAGCTTCGATTTAGTCTCCCTCAGTCCCCTTATCTCATCCTCCTCCCCGAAGGGTTGCCTATGAATCAATCAAGAAGCCATGGAAGATTACAGGACCTTGCTGGAAATTACGGCCCATTTCACTTATGCCCTAATACGGCGGCGCCGAGTTCATGGCGGTATCCCGGTAGAGAAGGTATCGGAAGCATCGGAGGTGGAATTTTCATTTGTAAAGTAGTAGGAATTGATTCAACATCTTTTTACATTGAACCAACCATGTCATCTGGTTGGTTCCTTGGTGGTTTGCTAATTCCTGCCCATGCTTATTGTTTTGTTGCTTGCATGACAGCAAGAAACCATGGGTGGCATGCGGTTTGCTCTGCCGAGGCACCAGATTAGATTAACTTAACCTCCCTCGTCGGATGCCTAGAAAGAGATCCGAATGAATGCACGAGGAAATCACCCTAATGCCAGAGCATTTGTCAACTGCTTGAATGTACATTGGAAACCAAACAAAAATTTTCATACTTTTTTAATAGCATAATGAGATGTTTGGAAGCGATTTTTAAATGGTTAAAATCATTTTGCATTTTAAAATAACTTGAAAAATGCTTTTAATATCAAAATCAATTTTATAGTATGAAAAATGCTTTCTATTGAATTGATTTTGAGTAATTAAAAATGCGTTTCAAAGTAAATTTAAATAGGAAAAAGGAGATTTTAGCCATTTCAAAAACACTTCCAAGTAGCTGAGGATAATTGATTTGAACTCATAACTTGTAGATCCTCCTCAGCTTCTGACTGTTGGGCTAATCTTTGATGGTTTATGCTTGTCTATTTTGAATTTATTGACCTCTCACTTATTTCTTTTCTGCATCTCTAAATCTGTGCTAAAAGAGTCATAATTGTTGTATCTTAACCGGAACAGATTTTAGTTTCCTGAAAAGCAAAAAAGAGAAAAGGGAGAAGATCACCGCAGAAATAATCAGAATTAAAGGAAGTTTCTGTCTACCAACATTGATAGCCATTACTTTCAATCATACGAATGTTCAATCATTTGAGAGAACAAAAGAAGTTTGCTTGGTTGAGAGGATTCAAAGGCCTGGGTTGATGCCAAATATTACATTCCTAGGAGGTTGACGTCCAACCAACCCCGGGGTCATTTAAGAGCATGACGGTACAGCTCTGGCTCCATCTCTTCCTTGTCATTGATGTAAGAGTCCGTTTTCATTGCTATCACCAGATGAGAAGGTTTGTGTGTGTGGCTGACAATTCTTTGTTTATCTTGGGCTTCAGTTTCCATCTTCTTTGTACTAAGTTATGATTCTTAGTGTTCAGTATATGGATCATCTCCCATAACAGATCATTCTTTACCTTGTTTGTTGTTCTCTTTAATATTGTTTAGAATGAAATCACCATGAATTGGCTTGAGTAATGAAAAAAAAAAAGGAAAGATAAAGCAATCTATAGGATATGAGTTCAGAATCCCATATATCGAAAAGATCAAC

Coding sequence (CDS)

ATGAATCAATCAAGAAGCCATGGAAGATTACAGGACCTTGCTGGAAATTACGGCCCATTTCACTTATGCCCTAATACGGCGGCGCCGAGTTCATGGCGGTATCCCGGTAGAGAAGGTATCGGAAGCATCGGAGGTGGAATTTTCATTTGTAAAGTAGTAGGAATTGATTCAACATCTTTTTACATTGAACCAACCATGTCATCTGGTTGGTTCCTTGGTGGTTTGCTAATTCCTGCCCATGCTTATTGTTTTGTTGCTTGCATGACAGCAAGAAACCATGGGTGGCATGCGGTTTGCTCTGCCGAGGCACCAGATTAG

Protein sequence

MNQSRSHGRLQDLAGNYGPFHLCPNTAAPSSWRYPGREGIGSIGGGIFICKVVGIDSTSFYIEPTMSSGWFLGGLLIPAHAYCFVACMTARNHGWHAVCSAEAPD
Homology
The following BLAST results are available for this feature:
BLAST of MELO3C029752.jh1.t1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C029752.jh1.t1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C029752.jh1.t1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C029752.jh1.t1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C029752.jh1MELO3C029752.jh1gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C029752.jh1.t1.exonMELO3C029752.jh1.t1.exonexon
MELO3C029752.jh1.t1.exonMELO3C029752.jh1.t1.exon_2exon
MELO3C029752.jh1.t1.exonMELO3C029752.jh1.t1.exon_3exon
MELO3C029752.jh1.t1.exonMELO3C029752.jh1.t1.exon_4exon
MELO3C029752.jh1.t1.exonMELO3C029752.jh1.t1.exon_5exon


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C029752.jh1.t1.stop_codonMELO3C029752.jh1.t1.stop_codonstop_codon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C029752.jh1.t1.cdsMELO3C029752.jh1.t1.cdsCDS
MELO3C029752.jh1.t1.cdsMELO3C029752.jh1.t1.cds_2CDS
MELO3C029752.jh1.t1.cdsMELO3C029752.jh1.t1.cds_3CDS
MELO3C029752.jh1.t1.cdsMELO3C029752.jh1.t1.cds_4CDS


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C029752.jh1.t1.start_codonMELO3C029752.jh1.t1.start_codonstart_codon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C029752.jh1.t1MELO3C029752.jh1.t1-proteinpolypeptide