MELO3C029045.jh1.t2 (mRNA) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonstart_codonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGAAGGCTCCGGGAGCAAGCGGGAGAGTCCAGGAACTTCAAAAAATAGGGTGGGGACTGAAATAAAAAAAGATGAGGTCAATGTCCAGAAGAAACAAAGGATTAAAAGTTTGGTAAAGTGTAGATTTATTCTCCAATGACTTGTGGTTTGTTAGGTTTAAAAAAAAGCTTTTATTTATATTGTTCCGTGTTTAGGTTTTGAGGAGGCGAGTATTTCTTAGAGGGAAAGGTGAAGGAAAAAAACAAAAAGAGGTTGAAGGAAATGTATAACAGTCCAACCTTTGTTATGGATGAATTATGTAGTATATAAATTCATTATAACTTTGACAAATAGGAAGATACTGAAAGCGAAAGCGAAAAGGAGGAAAAAGTACAGGAAGATGAAGAAGTAGAAGAAGATGAACAAGATGAAGATAATGAAGATGAAGAAAAACAAGATGAAGAAGAACAAGATGAAGAAGAGGAAGGGGAGACTGCCGTAGGTGAAGATTCGAATTCATCAACGAGTGAAATACCAACGGATACTAGGAAAAGAAAGAAGGCTGCAAAAAAGGGAAAGAAAGTAAGCAAATAATTTGCATTTGGTGTATGTTATTTTACGTACATACCTCAAATTTTGGTTTTATAATCTAGGTGAAGGCTATTAAAATAGAAGAAAAGGCAAGAAAAGATAAAAGGAGGAAGGGAAAAGCCCCAATGAAGCCGAAAAAATCTGAGGTATGTATTTCTGTAGCCACAACTCTGTATTTGTAGTGTTGCAAATGTATTGTATGGTGCTTCTGTTGTATGTGTTTTGAATTTGTGGCTTCTGTATTTGGTATGTTTAAGGTATTTGGTTGTATGCGATGTAGTTAATTACACTGTATGTATAAATTGAGAATGAAGAGTGTGAATGTGTTGTATGTTATTTTATGTTAACAGTGTATTCAATTATATATGTTGCCTGTGTTTTATGTTGACAGTGTATTTATCGGTTGAGTGTATATGAATTTCATTATGAGATATGTGTATATGGTGCATCCAATTAAACAGTATTTTTTATTAAGGTGTTCTGTTACATTGAATGTATTCACGGTCTGAGATTAATTTGTTCTAATTACAGTATATCTTTAGTGTTAATTAATTAAATGTGATAGATATATATGTGATTACTGATAATTTTTTCAAATCAATGTTAGGACTCAGTCTACTTAATGTGTTCTGAAAGGAGAAACGAGCCATTAAAAATCTACACATTAAGAGCACAGTAGTAGACAAAATTAAGAAAAATCTTGGAGATAGGTTGATTAATAGGTTTAGGGAGGGCATATTTGGGCAATTTCTAAACTTCTCCATAACAAACCAATCCTCCCAATTGTTGTTGCACCTTATTCAACGAATGTGCAAACCTAAATCGACTAGTCAACTTCAATTTCTAATAGAAGGAAGAGTTATGAGGTTTGGATTGAGAGAATTTGCGCTTATAACCGGCCTAAAATGCCATGAGATTCCTGATATTAACCATGAGGATATGAAGGGTGGTGGACGGCTAAAATGGGTATATTTTGAAAATCTTAAAATTGTGACGAGGCAGTACTTGAACGTTATGTTCAATATAAGTACTGCTGGAACCGATGATGATAGGATAAAAATGGCCAAATTATACTTTCTTGAGAGTTTTTTGATCCCTAACCCAAAATGTCTAAGTGTAGAGTGGGATCATATCATTATGGTAGATGATGATGAAGTATTTGATGGATACCCGTGGGGTAGAGTTGCTTTTGAAATCTTAATGGACTTCATGAATAGGGTCGTTTGTAGCAAAGGGCAAACGGGGATTTCGATAGGGGGTTTATTTTTCCCATTCTTGCTTGGGCTTACGAGGTAATCCCAACATTAAGTACTCCACCCAACTTATTTGCAACAAAGATCTCCAATGAAGTCCCTAGGATTATAAATTGGGTAGCTGACACACAACCCAAATGGAAGGATTTAAAACAGAAAGTCTTTGATTCGCCAACGGTATGTAAATCTGGTAATTTATAGTAGTTTATATATTCATAATAGTTTTGTTTATAAAGTATTTTTTTCCTTTTTGAAATAGCTTGAAGTGTCCCCCATGCTCGCAACCCCAATTAAAGTGGGAATGCCATACTTTGCACCATTCATCGAGACAGAAAAAGATATACTCAAAGAAGCAGAAGATGAGCTTCGAAAGACCAAGAATTCTGACCACATAGCCCATGTTTCGCTGAATAGAGGCATGCCCTCTACAAGTGGGATTGATGTCCTGATGAAAATGGTAGAGAAGATTGAGAATAGCCAAAAAAGGATGGAGACAAGTGTGGAAGGTATTCTTGAGTTTCTTAAATCTGTAGAATTGAAAATGAATAACCGATTTGAAGAACTAAGGCAGAAGATGAATGGAATAATAGAAGCAATAAAGAGCCAACAACGTAGTTCTTCGGGTGGCCAATACACTCATAAATTTATGGTAAGCATATTGTGTAGACTTTAATAATCTGTGTGCATGAATTTAAATCTTAACAAATACAGTGTATCTGGTTTGTATTTGTTGCGCAGGGAGCAAGGGCGTTTGAAGAGCACCTTGAGAAGGTGGAGGAGGACCAAGAAGAAGATGATGTTAAACATTTGAACTTGAATTCAAGCAATCCAACGGTGCTTGGAAAAAGGGATGACGATGAAGACAAAGACGAAAAAGGGCTTACGGATGAAAGT ATGGGAGAAGGCTCCGGGAGCAAGCGGGAGAGTCCAGGAACTTCAAAAAATAGGGTTTTGAGGAGGCGAGTATTTCTTAGAGGGAAAGGTGAAGGAAAAAAACAAAAAGAGGTTGAAGGAAATGTATAACAGTGAAGGCTATTAAAATAGAAGAAAAGGCAAGAAAAGATAAAAGGAGGAAGGGAAAAGCCCCAATGAAGCCGAAAAAATCTGAGCTTGAAGTGTCCCCCATGCTCGCAACCCCAATTAAAGTGGGAATGCCATACTTTGCACCATTCATCGAGACAGAAAAAGATATACTCAAAGAAGCAGAAGATGAGCTTCGAAAGACCAAGAATTCTGACCACATAGCCCATGTTTCGCTGAATAGAGGCATGCCCTCTACAAGTGGGATTGATGTCCTGATGAAAATGGGAGCAAGGGCGTTTGAAGAGCACCTTGAGAAGGTGGAGGAGGACCAAGAAGAAGATGATGTTAAACATTTGAACTTGAATTCAAGCAATCCAACGGTGCTTGGAAAAAGGGATGACGATGAAGACAAAGACGAAAAAGGGCTTACGGATGAAAGT ATGAAGCCGAAAAAATCTGAGCTTGAAGTGTCCCCCATGCTCGCAACCCCAATTAAAGTGGGAATGCCATACTTTGCACCATTCATCGAGACAGAAAAAGATATACTCAAAGAAGCAGAAGATGAGCTTCGAAAGACCAAGAATTCTGACCACATAGCCCATGTTTCGCTGAATAGAGGCATGCCCTCTACAAGTGGGATTGATGTCCTGATGAAAATGGGAGCAAGGGCGTTTGAAGAGCACCTTGAGAAGGTGGAGGAGGACCAAGAAGAAGATGATGTTAAACATTTGAACTTGAATTCAAGCAATCCAACGGTGCTTGGAAAAAGGGATGACGATGAAGACAAAGACGAAAAAGGGCTTACGGATGAAAGT MKPKKSELEVSPMLATPIKVGMPYFAPFIETEKDILKEAEDELRKTKNSDHIAHVSLNRGMPSTSGIDVLMKMGARAFEEHLEKVEEDQEEDDVKHLNLNSSNPTVLGKRDDDEDKDEKGLTDES Homology
BLAST of MELO3C029045.jh1.t2 vs. NCBI nr
Match: KAA0033753.1 (protein Ycf2-like [Cucumis melo var. makuwa] >TYK06532.1 protein Ycf2-like [Cucumis melo var. makuwa]) HSP 1 Score: 200 bits (508), Expect = 4.15e-60 Identity = 118/182 (64.84%), Postives = 118/182 (64.84%), Query Frame = 0
BLAST of MELO3C029045.jh1.t2 vs. NCBI nr
Match: KAA0025408.1 (protein Ycf2-like [Cucumis melo var. makuwa]) HSP 1 Score: 186 bits (473), Expect = 4.20e-57 Identity = 97/113 (85.84%), Postives = 104/113 (92.04%), Query Frame = 0
BLAST of MELO3C029045.jh1.t2 vs. NCBI nr
Match: TYK23840.1 (protein Ycf2-like [Cucumis melo var. makuwa]) HSP 1 Score: 189 bits (481), Expect = 5.13e-55 Identity = 100/118 (84.75%), Postives = 108/118 (91.53%), Query Frame = 0
BLAST of MELO3C029045.jh1.t2 vs. NCBI nr
Match: KAA0060857.1 (protein Ycf2-like [Cucumis melo var. makuwa]) HSP 1 Score: 180 bits (457), Expect = 1.14e-53 Identity = 93/118 (78.81%), Postives = 105/118 (88.98%), Query Frame = 0
BLAST of MELO3C029045.jh1.t2 vs. NCBI nr
Match: KAA0039580.1 (protein Ycf2-like [Cucumis melo var. makuwa] >TYK01720.1 protein Ycf2-like [Cucumis melo var. makuwa]) HSP 1 Score: 173 bits (438), Expect = 3.27e-50 Identity = 99/140 (70.71%), Postives = 106/140 (75.71%), Query Frame = 0
BLAST of MELO3C029045.jh1.t2 vs. ExPASy TrEMBL
Match: A0A5A7STD7 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2249G00040 PE=4 SV=1) HSP 1 Score: 200 bits (508), Expect = 2.01e-60 Identity = 118/182 (64.84%), Postives = 118/182 (64.84%), Query Frame = 0
BLAST of MELO3C029045.jh1.t2 vs. ExPASy TrEMBL
Match: A0A5A7SGZ3 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1220G00460 PE=4 SV=1) HSP 1 Score: 186 bits (473), Expect = 2.03e-57 Identity = 97/113 (85.84%), Postives = 104/113 (92.04%), Query Frame = 0
BLAST of MELO3C029045.jh1.t2 vs. ExPASy TrEMBL
Match: A0A5D3DKA6 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00030 PE=4 SV=1) HSP 1 Score: 189 bits (481), Expect = 2.48e-55 Identity = 100/118 (84.75%), Postives = 108/118 (91.53%), Query Frame = 0
BLAST of MELO3C029045.jh1.t2 vs. ExPASy TrEMBL
Match: A0A5A7V1Y7 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00920 PE=4 SV=1) HSP 1 Score: 180 bits (457), Expect = 5.54e-54 Identity = 93/118 (78.81%), Postives = 105/118 (88.98%), Query Frame = 0
BLAST of MELO3C029045.jh1.t2 vs. ExPASy TrEMBL
Match: A0A5D3BRJ0 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold775G00450 PE=4 SV=1) HSP 1 Score: 173 bits (438), Expect = 1.58e-50 Identity = 99/140 (70.71%), Postives = 106/140 (75.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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