MELO3C029032.1 (mRNA) Melon (DHL92) v4

Overview
NameMELO3C029032.1
TypemRNA
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionCell division protein ftsH
Locationchr01: 15667260 .. 15668589 (-)
Sequence length468
RNA-Seq ExpressionMELO3C029032.1
SyntenyMELO3C029032.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAGGAGGTCTCTTTGCACGTATAAGGAATTTACATTTTGTTCGGCAAAAACTACCACGATTTTTTAAAAAGCTCCCACTTGTTTACCGTCTTCAATTCAAAGCTCACATTAGGGTTTTCATTCTTCGTCTCCAGCAATTCCGACGTCCGGCTGCAAGGCATTTTCCATCACTGTGTTGTGAAGCCATCTTCCATTACGGTGAGTCTATTTTTGAACTTCCTATATGAAATAAAATGGGCTATATTTGCATTAGATCGTATTTCTTTAAAGTCTAGAATCGTCTTCTTGTTACTATTTTATTTAGAAAATGAGACCGAAGAAGCATTTAGGGTTTATTAACATTCATGATTTATGTTGTGAATTTGACAGATGTAAAGTATTATTTTACTCTTAAAACCACAAATTAAGTAATACATGTTGTATAATCTTAAAATGCAACTTTGAAAAGAAGCAGGAAGGGTTTGGTTATGATGTTTTTGAAGTTCGACTATGTTTTCACTTAAACATTGAAGTTCGAATCTATAGAAAATCATAATATCGTAAATGGTAGTTTATATTGTATATTAATACGTATATGCAGTTGAAAACAAAATGGTGCGTCGAAGCGAAAGATGCCTAGGATCAAGGTTGAAACATATTAAATCAAACAAGGATGATCCAATCTGATTGACAATACAAAGGTATATTTTAAAGTTTCTGAAGATGTATTTAAAATGGTATAAATCGTTAAACAAAATATAATATGTATATATATGGTAGAAGGAAGATAGATATGAAGAACCAATTCAATATGCACCACCGCAAACTATAGATCCAAACCATGATGAACAAGAGTTAAGAGAACCTACAGGTATACAAATTGTGTTGTAGTGAAACCAGATGTTGTCTGCTTTTATTATATTTGTTTGTAGATGAATGAAGGAGAAACATCATATGACGTACCACTTAACGATTCATCAGAGTCTGATGAGGTTTATTTATGTTTTGTATGGATTGAAAATGGTTTATCATACAAATGATGAGTTTTAAAATTGTACGTTAATGATATTCTGTTTTCTGCAGGACAATTTATCCATTGCCAAAAGGAGATTGTTCGAATCTGTATTGAAGGGGAAATGGAAAGCGAGTGAAAATGTAAATCTATGTGTGATATAAAATTTAGTTGTATTTGTTTTTAAGAAACTAATGTTACATTAATATAACTTTTTAATTGTTAATATGAAATGTAGATATCTAAAAAGAGAAAGATAGAGAGAGTGGTCAAAGGAAGGGAAGAGAAGAAGGATCATACTAAGAAGTTTAGAAAAAGTGATAAGAAACCATAG

mRNA sequence

ATGAAAAGGAGGTCTCTTTGCACCAATTCCGACGTCCGGCTGCAAGGCATTTTCCATCACTGTGTTGTGAAGCCATCTTCCATTACGAAAATGAGACCGAAGAAGCATTTAGGGTTTATTAACATTCATGATTTATGTTGTGAATTTGACAGATGTAAAAAGGAAGATAGATATGAAGAACCAATTCAATATGCACCACCGCAAACTATAGATCCAAACCATGATGAACAAGAGTTAAGAGAACCTACAGGAGAAACATCATATGACGTACCACTTAACGATTCATCAGAGTCTGATGAGGACAATTTATCCATTGCCAAAAGGAGATTGTTCGAATCTGTATTGAAGGGGAAATGGAAAGCGAGTGAAAATATATCTAAAAAGAGAAAGATAGAGAGAGTGGTCAAAGGAAGGGAAGAGAAGAAGGATCATACTAAGAAGTTTAGAAAAAGTGATAAGAAACCATAG

Coding sequence (CDS)

ATGAAAAGGAGGTCTCTTTGCACCAATTCCGACGTCCGGCTGCAAGGCATTTTCCATCACTGTGTTGTGAAGCCATCTTCCATTACGAAAATGAGACCGAAGAAGCATTTAGGGTTTATTAACATTCATGATTTATGTTGTGAATTTGACAGATGTAAAAAGGAAGATAGATATGAAGAACCAATTCAATATGCACCACCGCAAACTATAGATCCAAACCATGATGAACAAGAGTTAAGAGAACCTACAGGAGAAACATCATATGACGTACCACTTAACGATTCATCAGAGTCTGATGAGGACAATTTATCCATTGCCAAAAGGAGATTGTTCGAATCTGTATTGAAGGGGAAATGGAAAGCGAGTGAAAATATATCTAAAAAGAGAAAGATAGAGAGAGTGGTCAAAGGAAGGGAAGAGAAGAAGGATCATACTAAGAAGTTTAGAAAAAGTGATAAGAAACCATAG

Protein sequence

MKRRSLCTNSDVRLQGIFHHCVVKPSSITKMRPKKHLGFINIHDLCCEFDRCKKEDRYEEPIQYAPPQTIDPNHDEQELREPTGETSYDVPLNDSSESDEDNLSIAKRRLFESVLKGKWKASENISKKRKIERVVKGREEKKDHTKKFRKSDKKP
Homology
BLAST of MELO3C029032.1 vs. NCBI nr
Match: KAA0039549.1 (uncharacterized protein E6C27_scaffold744G00180 [Cucumis melo var. makuwa] >TYK01751.1 uncharacterized protein E5676_scaffold775G00810 [Cucumis melo var. makuwa])

HSP 1 Score: 95.1 bits (235), Expect = 5.6e-16
Identity = 58/83 (69.88%), Postives = 67/83 (80.72%), Query Frame = 0

Query: 72  PNHDEQELREP--TGETSYDVPLNDSSESDEDNLSIAKRRLFESVLKGKWKA--SENISK 131
           P HD+ +  +P   GET YDVPLN SSESDEDNL IA+RRLFE VLKGK K   +EN+SK
Sbjct: 2   PTHDKGKQLKPMNEGETLYDVPLNGSSESDEDNLPIAERRLFEYVLKGKRKTIENENVSK 61

Query: 132 KRKIERVVKGREEKKDHTKKFRK 151
           KRKIE+VVKGREEKKD+TKK +K
Sbjct: 62  KRKIEKVVKGREEKKDNTKKIKK 84

BLAST of MELO3C029032.1 vs. NCBI nr
Match: TYK07884.1 (uncharacterized protein E5676_scaffold1748G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 79.3 bits (194), Expect = 3.2e-11
Identity = 51/82 (62.20%), Postives = 61/82 (74.39%), Query Frame = 0

Query: 71  DPNHDEQELREPTGETSYDVPLNDSSESDEDNLSIAKRRLFESVLKGKWKA--SENISKK 130
           DP   E   +   GETSYDV LN SSE DE NL IAKRRLFE VLKGK KA  +EN+SKK
Sbjct: 65  DPIVIEDNAKMNEGETSYDVSLNFSSEFDEVNLPIAKRRLFERVLKGKGKATETENVSKK 124

Query: 131 RKIERVVKGREEKKDHTKKFRK 151
            K+E+VVKG+EE K+++KK +K
Sbjct: 125 GKLEKVVKGKEENKNNSKKLKK 146

BLAST of MELO3C029032.1 vs. NCBI nr
Match: TYK04487.1 (uncharacterized protein E5676_scaffold409G00990 [Cucumis melo var. makuwa])

HSP 1 Score: 76.3 bits (186), Expect = 2.7e-10
Identity = 47/80 (58.75%), Postives = 61/80 (76.25%), Query Frame = 0

Query: 73  NHDEQELREPTGETSYDVPLNDSSESDEDNLSIAKRRLFESVLKGKWKASE--NISKKRK 132
           N  +Q      G+TSYDV LN SSESD++N+  AKRRLFE VLKGK K +E  N+SKKRK
Sbjct: 5   NKGKQSKTINEGKTSYDVQLNFSSESDKNNVPKAKRRLFERVLKGKGKETETVNVSKKRK 64

Query: 133 IERVVKGREEKKDHTKKFRK 151
           +E++VK RE+KKD++KK +K
Sbjct: 65  LEKIVKPREQKKDNSKKIKK 84

BLAST of MELO3C029032.1 vs. NCBI nr
Match: KAA0065927.1 (uncharacterized protein E6C27_scaffold538G001120 [Cucumis melo var. makuwa] >TYK15090.1 uncharacterized protein E5676_scaffold259G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 76.3 bits (186), Expect = 2.7e-10
Identity = 47/74 (63.51%), Postives = 55/74 (74.32%), Query Frame = 0

Query: 73  NHDEQELREPTGETSYDVPLNDSSESDEDNLSIAKRRLFESVL--KGKWKASENISKKRK 132
           N  +Q      GET YDVPLN S ESDE+N+ IAKRRLFE VL  KGK   +EN+SKKRK
Sbjct: 5   NKGKQSKTINEGETPYDVPLNFSLESDENNVPIAKRRLFERVLKEKGKKTQTENVSKKRK 64

Query: 133 IERVVKGREEKKDH 145
           +E+VVK REEKKD+
Sbjct: 65  LEKVVKAREEKKDN 78

BLAST of MELO3C029032.1 vs. NCBI nr
Match: KAA0039088.1 (uncharacterized protein E6C27_scaffold84G001870 [Cucumis melo var. makuwa] >TYK14877.1 uncharacterized protein E5676_scaffold2047G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 1.7e-09
Identity = 42/61 (68.85%), Postives = 50/61 (81.97%), Query Frame = 0

Query: 84  GETSYDVPLNDSSESDEDNLSIAKRRLFESVLKGKWK--ASENISKKRKIERVVKGREEK 143
           GETSYDVPLN SSESDE N+ I+KRRLFE VLKGK K   +EN+SKKR +E++VK  E+K
Sbjct: 39  GETSYDVPLNFSSESDEANVPISKRRLFECVLKGKRKETQTENVSKKRNLEKIVKATEQK 98

BLAST of MELO3C029032.1 vs. ExPASy TrEMBL
Match: A0A5D3BPP5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold775G00810 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 2.7e-16
Identity = 58/83 (69.88%), Postives = 67/83 (80.72%), Query Frame = 0

Query: 72  PNHDEQELREP--TGETSYDVPLNDSSESDEDNLSIAKRRLFESVLKGKWKA--SENISK 131
           P HD+ +  +P   GET YDVPLN SSESDEDNL IA+RRLFE VLKGK K   +EN+SK
Sbjct: 2   PTHDKGKQLKPMNEGETLYDVPLNGSSESDEDNLPIAERRLFEYVLKGKRKTIENENVSK 61

Query: 132 KRKIERVVKGREEKKDHTKKFRK 151
           KRKIE+VVKGREEKKD+TKK +K
Sbjct: 62  KRKIEKVVKGREEKKDNTKKIKK 84

BLAST of MELO3C029032.1 vs. ExPASy TrEMBL
Match: A0A5D3C9H5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1748G00010 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.5e-11
Identity = 51/82 (62.20%), Postives = 61/82 (74.39%), Query Frame = 0

Query: 71  DPNHDEQELREPTGETSYDVPLNDSSESDEDNLSIAKRRLFESVLKGKWKA--SENISKK 130
           DP   E   +   GETSYDV LN SSE DE NL IAKRRLFE VLKGK KA  +EN+SKK
Sbjct: 65  DPIVIEDNAKMNEGETSYDVSLNFSSEFDEVNLPIAKRRLFERVLKGKGKATETENVSKK 124

Query: 131 RKIERVVKGREEKKDHTKKFRK 151
            K+E+VVKG+EE K+++KK +K
Sbjct: 125 GKLEKVVKGKEENKNNSKKLKK 146

BLAST of MELO3C029032.1 vs. ExPASy TrEMBL
Match: A0A5D3CUJ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold259G00140 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.3e-10
Identity = 47/74 (63.51%), Postives = 55/74 (74.32%), Query Frame = 0

Query: 73  NHDEQELREPTGETSYDVPLNDSSESDEDNLSIAKRRLFESVL--KGKWKASENISKKRK 132
           N  +Q      GET YDVPLN S ESDE+N+ IAKRRLFE VL  KGK   +EN+SKKRK
Sbjct: 5   NKGKQSKTINEGETPYDVPLNFSLESDENNVPIAKRRLFERVLKEKGKKTQTENVSKKRK 64

Query: 133 IERVVKGREEKKDH 145
           +E+VVK REEKKD+
Sbjct: 65  LEKVVKAREEKKDN 78

BLAST of MELO3C029032.1 vs. ExPASy TrEMBL
Match: A0A5D3BY91 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00990 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.3e-10
Identity = 47/80 (58.75%), Postives = 61/80 (76.25%), Query Frame = 0

Query: 73  NHDEQELREPTGETSYDVPLNDSSESDEDNLSIAKRRLFESVLKGKWKASE--NISKKRK 132
           N  +Q      G+TSYDV LN SSESD++N+  AKRRLFE VLKGK K +E  N+SKKRK
Sbjct: 5   NKGKQSKTINEGKTSYDVQLNFSSESDKNNVPKAKRRLFERVLKGKGKETETVNVSKKRK 64

Query: 133 IERVVKGREEKKDHTKKFRK 151
           +E++VK RE+KKD++KK +K
Sbjct: 65  LEKIVKPREQKKDNSKKIKK 84

BLAST of MELO3C029032.1 vs. ExPASy TrEMBL
Match: A0A5A7T880 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2047G00080 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 8.4e-10
Identity = 42/61 (68.85%), Postives = 50/61 (81.97%), Query Frame = 0

Query: 84  GETSYDVPLNDSSESDEDNLSIAKRRLFESVLKGKWK--ASENISKKRKIERVVKGREEK 143
           GETSYDVPLN SSESDE N+ I+KRRLFE VLKGK K   +EN+SKKR +E++VK  E+K
Sbjct: 39  GETSYDVPLNFSSESDEANVPISKRRLFECVLKGKRKETQTENVSKKRNLEKIVKATEQK 98

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0039549.15.6e-1669.88uncharacterized protein E6C27_scaffold744G00180 [Cucumis melo var. makuwa] >TYK0... [more]
TYK07884.13.2e-1162.20uncharacterized protein E5676_scaffold1748G00010 [Cucumis melo var. makuwa][more]
TYK04487.12.7e-1058.75uncharacterized protein E5676_scaffold409G00990 [Cucumis melo var. makuwa][more]
KAA0065927.12.7e-1063.51uncharacterized protein E6C27_scaffold538G001120 [Cucumis melo var. makuwa] >TYK... [more]
KAA0039088.11.7e-0968.85uncharacterized protein E6C27_scaffold84G001870 [Cucumis melo var. makuwa] >TYK1... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BPP52.7e-1669.88Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3C9H51.5e-1162.20Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CUJ21.3e-1063.51Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BY911.3e-1058.75Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7T8808.4e-1068.85Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..155
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..146

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C029032MELO3C029032gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C029032.1:exon:15928MELO3C029032.1:exon:15928exon
MELO3C029032.1:exon:15927MELO3C029032.1:exon:15927exon
MELO3C029032.1:exon:15926MELO3C029032.1:exon:15926exon
MELO3C029032.1:exon:15925MELO3C029032.1:exon:15925exon
MELO3C029032.1:exon:15924MELO3C029032.1:exon:15924exon
MELO3C029032.1:exon:15923MELO3C029032.1:exon:15923exon
MELO3C029032.1:exon:15922MELO3C029032.1:exon:15922exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C029032.1:cdsMELO3C029032.1:cdsCDS
MELO3C029032.1:cdsMELO3C029032.1:cds_2CDS
MELO3C029032.1:cdsMELO3C029032.1:cds_3CDS
MELO3C029032.1:cdsMELO3C029032.1:cds_4CDS
MELO3C029032.1:cdsMELO3C029032.1:cds_5CDS
MELO3C029032.1:cdsMELO3C029032.1:cds_6CDS
MELO3C029032.1:cdsMELO3C029032.1:cds_7CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C029032.1MELO3C029032.1-proteinpolypeptide