MELO3C028984.1 (mRNA) Melon (DHL92) v4

Overview
NameMELO3C028984.1
TypemRNA
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Descriptionaminoacylase-1-like
Locationchr01: 11395744 .. 11398535 (-)
Sequence length699
RNA-Seq ExpressionMELO3C028984.1
SyntenyMELO3C028984.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGAACTCCGTCTTCACTATCGCTTCTTTTCAGTTACTCTTTATTTTCTTCTCCTTTCATTTTCTCTCTCTTTTAGCCATTCGCAGTACGTTGATGATGAATCCGACCAAGATTCTCCGGTCTCTCGCTTTCAACGCTACCTCAGAATCTAAACCGCACATCCAGATCCCGATTATGCCTCCGTCGTTGCCTTCCTTAGATCTCAAGCACAAGAAATCGGTCTCCATACGCAGGTACTCGAGTTCGGTCCAGGTAAGCCTCTTCTTCTTGTGACTTGGTATGGATCATTTTTCCATTCAGAATCTCAGAAACCGGGATTTCATTCCTGTCCGTACTTATTAAAAGGATTGTTAATCTCACAATTTGCCAGCCATCAGGATCAAGAAAACTGATAATCTTGGAGTTCATTTGGCTATCCAAACTGGGTGGTTGTGTTATCTTTCCATCGAGTTCTTCAGTAATGAGATTAACAATCTTAGCACTCTTGTATACATCATCGGTGCCAATAGCAACCTGAAATAAAAATAAAAATCTAGCATAAGTATGGGAATTAGTGTTCTTAACCAAGGAAAAACTCCAAGTTAAAAGGAAAAATTTGACCTGGGAATATCCATTTCCCTTGGAATGTTGTGTCACACCGTGATTGTAAGTCAACTCGATAGTTATTGTCTCTAACTCATCTACATATCCCATCAAGGCTATGGCGTACTGCAGAGTCAATTGGTTGTGCATTGAAATTTATAGCATTTTGTCAACCTTCAGTTTGCTAAAATGGATGGAAGTAAAAGTTTAAAGTTCACCTTCTATTCAAGATTCTCAACCTTGGTAAGTACCCTTATTCCCAATGCCTGTATATGGAAACAAATTCTAAGTTAGGATCGAAAATTTCTTAGGTCTTATTCGATAATCATTTAGTTTCTTTTACAATTATAATTGTTGGTTTTTACCTAATGACTTTTTTTCACATGATTTCTAGATTTGAATTCTCAACCAAATTCGAATAACAAAAACAAGTTTGTAAAGACTATCAATTTTAGTTTTTAAGCTTTGACTTTGTTTTTTAAAGCACTTAATAAAAGTTGGTAAGCAAATAAAGAAATCAACAGGTAAAGTAATGTTTATGATCTTATTTTTCAAAACCGAAAAATGAGAAACCAAATGAATGTCAAATAAGAATACTAACATATTTCGTGTACTTGCTTTGCAATTCTGTTGTATTTCTAAATGTCCTTAGAATGCTTCGCTCTGGACATTCATACTTGAGTATTTAGGTACAAGAGGTTGAAATTTGATAAAAACAAGCATTGATTTTCTATTGTTGACTTTAAGCCATAGTTTGTCTTGCTTCTCGACTTAGGCGTTTTTTTTTATTATAGCTCCTGGAACACCAAAACATGAGATATTTGAGAAATATGCTGCCTCAATTTTGCAAGGGTCTGCTATATTGAATAGAGTTTCTTTGATTATGGCTCCTAGGAAACCTGTTAGATTGCTGTTTTTGCTTTTTGATTTTTTTTGTGGATACTTTAATGTGAATGTATTTCCAGGCCATAGTAAGCTTGTGGGTTGGTGCTGTGATTAGTAGCTGGTGCAATTTCATAACTGTCTTGTATGTTGGTAAGTGTTTACAGATTCTGCTTCTCAAAACATTTACATCTTTAATTTCTTTGATGATATCATTTACCTATAACCACTAAAGAATTTAGAGTGTTTTTGGTTGATTTAGATATTTGATTCAAATTATGATGGCTACTATAATTTAATGTTGTAGGATCATATTATTGAGCGAGATTATTTTAGAGGAGTGTAACCTGTTTCGAACACCTACAGTTTACTGGTTCAAGTGTTTGAATTATTTTGCTTCTTTGGGGGAAGAGACTTTAGCTATTTCATTTCATTACCTAATATAGGATGAGCTTTTTCCAATTCTATGCCACATGGAAAGCATGGTACTCCACAATCATTGACTTCGATGAGATTGTTGTGCTATGAAATTAGTTGAGAAGAATGTAAACTGTCTAAAACAGAGTAAAAAAGCATAACCGAAATTATCTTGCTTCTGAGTCAGCTGCAACGAATCAAAGGTTGGATAGAAACTTTTTGGTCATGGGAGACCCTACGTTCCTTAGATAATCTAAAACCATCAATCTTCACAACTAGTTTTTGTCTTTTTGTACAATAGTGTTCTTTGAGCGTTCCAATATTATATATAGATAACAATTGTTTTTGTCGTGCTTGATTGAATGTAGATAACTGTATATCCTTCACATAAGCATAATTTGTCGAGGTTGATTGAAAGTACACAGACAATTTCTAGCTTCTTCAGACAATACAAAGATATGGTGTACATATCATTCAGGAAAGAAATTATGTGCATTATATTCATGTGCTTATTCAAGATATTTCTAAAGGTTTATTTATGACTAATAATTGTTCTCATATACCAAGTGACTTGAAATTGGACATTCGTTTTCTTTGCTTGGGTTGTCATTTCAGATTTTCTGTAGTTTTAAAAAGATAGTTATTAATTAAGTGTTGGATAAAATGCATTAATCTGTAAGAAATTCATAAGTTAGACTTCTGTTACAATATAAATGAAGATTCATACTTGATGAGAAAATACAGAACATGCTTTGATGATATCTGCTGGAACTCTACTGAAGAAAATAACTTATGAACATAAAATAGCAGATGCACAGTCTTCTCCAAATTTTAGTATATTAGGTGTTGTTATGATATGTGGTGCCTTTAGGCAACTTGTAGGAAGCCATTTTTACTTCGAATCGTGA

mRNA sequence

ATGTCGAACTCCGTCTTCACTATCGCTTCTTTTCAGTTACTCTTTATTTTCTTCTCCTTTCATTTTCTCTCTCTTTTAGCCATTCGCAGTACGTTGATGATGAATCCGACCAAGATTCTCCGGTCTCTCGCTTTCAACGCTACCTCAGAATCTAAACCGCACATCCAGATCCCGATTATGCCTCCGTCGTTGCCTTCCTTAGATCTCAAGCACAAGAAATCGGTCTCCATACGCAGGTACTCGAGTTCGGTCCAGTTTGCTAAAATGGATGGAAGTAAAAGTTTAAAGTTCACCTTCTATTCAAGATTCTCAACCTTGCACTTAATAAAAGTTGGTAAGCAAATAAAGAAATCAACAGCTCCTGGAACACCAAAACATGAGATATTTGAGAAATATGCTGCCTCAATTTTGCAAGGGTCTGCTATATTGAATAGAGTTTCTTTGATTATGGCTCCTAGGAAACCTGCCATAGTAAGCTTGTGGGTTGGTGCTGTGATTAGTAGCTGGTGCAATTTCATAACTGTCTTGTATGTTGAACATGCTTTGATGATATCTGCTGGAACTCTACTGAAGAAAATAACTTATGAACATAAAATAGCAGATGCACAGTCTTCTCCAAATTTTAGTATATTAGGTGTTGTTATGATATGTGGTGCCTTTAGGCAACTTGTAGGAAGCCATTTTTACTTCGAATCGTGA

Coding sequence (CDS)

ATGTCGAACTCCGTCTTCACTATCGCTTCTTTTCAGTTACTCTTTATTTTCTTCTCCTTTCATTTTCTCTCTCTTTTAGCCATTCGCAGTACGTTGATGATGAATCCGACCAAGATTCTCCGGTCTCTCGCTTTCAACGCTACCTCAGAATCTAAACCGCACATCCAGATCCCGATTATGCCTCCGTCGTTGCCTTCCTTAGATCTCAAGCACAAGAAATCGGTCTCCATACGCAGGTACTCGAGTTCGGTCCAGTTTGCTAAAATGGATGGAAGTAAAAGTTTAAAGTTCACCTTCTATTCAAGATTCTCAACCTTGCACTTAATAAAAGTTGGTAAGCAAATAAAGAAATCAACAGCTCCTGGAACACCAAAACATGAGATATTTGAGAAATATGCTGCCTCAATTTTGCAAGGGTCTGCTATATTGAATAGAGTTTCTTTGATTATGGCTCCTAGGAAACCTGCCATAGTAAGCTTGTGGGTTGGTGCTGTGATTAGTAGCTGGTGCAATTTCATAACTGTCTTGTATGTTGAACATGCTTTGATGATATCTGCTGGAACTCTACTGAAGAAAATAACTTATGAACATAAAATAGCAGATGCACAGTCTTCTCCAAATTTTAGTATATTAGGTGTTGTTATGATATGTGGTGCCTTTAGGCAACTTGTAGGAAGCCATTTTTACTTCGAATCGTGA

Protein sequence

MSNSVFTIASFQLLFIFFSFHFLSLLAIRSTLMMNPTKILRSLAFNATSESKPHIQIPIMPPSLPSLDLKHKKSVSIRRYSSSVQFAKMDGSKSLKFTFYSRFSTLHLIKVGKQIKKSTAPGTPKHEIFEKYAASILQGSAILNRVSLIMAPRKPAIVSLWVGAVISSWCNFITVLYVEHALMISAGTLLKKITYEHKIADAQSSPNFSILGVVMICGAFRQLVGSHFYFES
Homology
[Close]
BLAST of MELO3C028984.1 vs. NCBI nr
Match: XP_008456226.1 (PREDICTED: aminoacylase-1-like [Cucumis melo])

HSP 1 Score: 98.6 bits (244), Expect = 7.5e-17
Identity = 52/60 (86.67%), Postives = 54/60 (90.00%), Query Frame = 0 

Query: 26 LAIRSTLMMNPTKILRSLAFNATSESKPHIQIPIMPPSLPSLDLKHKKSVSIRRYSSSVQ 85
          ++IRS LMMNP KILRSLAFNATSESKPHIQIPIMPP  PS DLKHKKSVSI RYSSSVQ
Sbjct: 31 ISIRSMLMMNPIKILRSLAFNATSESKPHIQIPIMPPPSPSSDLKHKKSVSICRYSSSVQ 90

[Close]
BLAST of MELO3C028984.1 vs. NCBI nr
Match: KAA0033776.1 (small G protein signaling modulator 3 [Cucumis melo var. makuwa] >TYK22358.1 small G protein signaling modulator 3 [Cucumis melo var. makuwa])

HSP 1 Score: 90.5 bits (223), Expect = 2.0e-14
Identity = 47/51 (92.16%), Postives = 47/51 (92.16%), Query Frame = 0 

Query: 34 MNPTKILRSLAFNATSESKPHIQIPIMPPSLPSLDLKHKKSVSIRRYSSSV 85
          MNP KILRSLAFNATSESKPHIQI I PPSLPS DLKHKKSVSIRRYSSSV
Sbjct: 1  MNPIKILRSLAFNATSESKPHIQISITPPSLPSSDLKHKKSVSIRRYSSSV 51

[Close]
BLAST of MELO3C028984.1 vs. NCBI nr
Match: KAA0058504.1 (TBC1 domain family member 2A [Cucumis melo var. makuwa] >TYK07241.1 TBC1 domain family member 2A [Cucumis melo var. makuwa])

HSP 1 Score: 85.1 bits (209), Expect = 8.6e-13
Identity = 45/51 (88.24%), Postives = 46/51 (90.20%), Query Frame = 0 

Query: 38  KILRSLAFNATSESKPHIQIPIMPPSLPSLDLKHKKSVSIRRYSSSVQFAK 89
           KILRSLAFNATSESKPHIQIPI PP  PS DLKHKKSVSIRRYSSSVQ +K
Sbjct: 103 KILRSLAFNATSESKPHIQIPITPPPSPSSDLKHKKSVSIRRYSSSVQPSK 153

[Close]
BLAST of MELO3C028984.1 vs. NCBI nr
Match: KAA0048633.1 (aminoacylase-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 84.7 bits (208), Expect = 1.1e-12
Identity = 44/52 (84.62%), Postives = 46/52 (88.46%), Query Frame = 0 

Query: 34 MNPTKILRSLAFNATSESKPHIQIPIMPPSLPSLDLKHKKSVSIRRYSSSVQ 86
          MNP KIL SLAFNATSESKPHIQIPI PP  PS DLKHKKSVSIRR+SSSV+
Sbjct: 1  MNPIKILWSLAFNATSESKPHIQIPITPPPSPSSDLKHKKSVSIRRHSSSVR 52

[Close]
BLAST of MELO3C028984.1 vs. NCBI nr
Match: KAA0037160.1 (aminoacylase-1-like [Cucumis melo var. makuwa] >TYK13911.1 aminoacylase-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 83.2 bits (204), Expect = 3.3e-12
Identity = 43/48 (89.58%), Postives = 43/48 (89.58%), Query Frame = 0 

Query: 32 LMMNPTKILRSLAFNATSESKPHIQIPIMPPSLPSLDLKHKKSVSIRR 80
          LMMNP KILRSLAFNATSESKPHIQIPIMPP  PS DLKHKKSVSI R
Sbjct: 2  LMMNPIKILRSLAFNATSESKPHIQIPIMPPPSPSSDLKHKKSVSICR 49

[Close]
BLAST of MELO3C028984.1 vs. ExPASy TrEMBL
Match: A0A1S3C3E8 (aminoacylase-1-like OS=Cucumis melo OX=3656 GN=LOC103496230 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 3.6e-17
Identity = 52/60 (86.67%), Postives = 54/60 (90.00%), Query Frame = 0 

Query: 26 LAIRSTLMMNPTKILRSLAFNATSESKPHIQIPIMPPSLPSLDLKHKKSVSIRRYSSSVQ 85
          ++IRS LMMNP KILRSLAFNATSESKPHIQIPIMPP  PS DLKHKKSVSI RYSSSVQ
Sbjct: 31 ISIRSMLMMNPIKILRSLAFNATSESKPHIQIPIMPPPSPSSDLKHKKSVSICRYSSSVQ 90

[Close]
BLAST of MELO3C028984.1 vs. ExPASy TrEMBL
Match: A0A5A7SUZ1 (Small G protein signaling modulator 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00790 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 9.9e-15
Identity = 47/51 (92.16%), Postives = 47/51 (92.16%), Query Frame = 0 

Query: 34 MNPTKILRSLAFNATSESKPHIQIPIMPPSLPSLDLKHKKSVSIRRYSSSV 85
          MNP KILRSLAFNATSESKPHIQI I PPSLPS DLKHKKSVSIRRYSSSV
Sbjct: 1  MNPIKILRSLAFNATSESKPHIQISITPPSLPSSDLKHKKSVSIRRYSSSV 51

[Close]
BLAST of MELO3C028984.1 vs. ExPASy TrEMBL
Match: A0A5D3C5S0 (TBC1 domain family member 2A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G001370 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 4.2e-13
Identity = 45/51 (88.24%), Postives = 46/51 (90.20%), Query Frame = 0 

Query: 38  KILRSLAFNATSESKPHIQIPIMPPSLPSLDLKHKKSVSIRRYSSSVQFAK 89
           KILRSLAFNATSESKPHIQIPI PP  PS DLKHKKSVSIRRYSSSVQ +K
Sbjct: 103 KILRSLAFNATSESKPHIQIPITPPPSPSSDLKHKKSVSIRRYSSSVQPSK 153

[Close]
BLAST of MELO3C028984.1 vs. ExPASy TrEMBL
Match: A0A5A7TYH6 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1468G00020 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 5.4e-13
Identity = 44/52 (84.62%), Postives = 46/52 (88.46%), Query Frame = 0 

Query: 34 MNPTKILRSLAFNATSESKPHIQIPIMPPSLPSLDLKHKKSVSIRRYSSSVQ 86
          MNP KIL SLAFNATSESKPHIQIPI PP  PS DLKHKKSVSIRR+SSSV+
Sbjct: 1  MNPIKILWSLAFNATSESKPHIQIPITPPPSPSSDLKHKKSVSIRRHSSSVR 52

[Close]
BLAST of MELO3C028984.1 vs. ExPASy TrEMBL
Match: A0A5D3CQ42 (Aminoacylase-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G001080 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.6e-12
Identity = 43/48 (89.58%), Postives = 43/48 (89.58%), Query Frame = 0 

Query: 32 LMMNPTKILRSLAFNATSESKPHIQIPIMPPSLPSLDLKHKKSVSIRR 80
          LMMNP KILRSLAFNATSESKPHIQIPIMPP  PS DLKHKKSVSI R
Sbjct: 2  LMMNPIKILRSLAFNATSESKPHIQIPIMPPPSPSSDLKHKKSVSICR 49

The following BLAST results are available for this feature:
BLAST of MELO3C028984.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008456226.17.5e-1786.67PREDICTED: aminoacylase-1-like [Cucumis melo][more]
KAA0033776.12.0e-1492.16small G protein signaling modulator 3 [Cucumis melo var. makuwa] >TYK22358.1 sma... [more]
KAA0058504.18.6e-1388.24TBC1 domain family member 2A [Cucumis melo var. makuwa] >TYK07241.1 TBC1 domain ... [more]
KAA0048633.11.1e-1284.62aminoacylase-1-like [Cucumis melo var. makuwa][more]
KAA0037160.13.3e-1289.58aminoacylase-1-like [Cucumis melo var. makuwa] >TYK13911.1 aminoacylase-1-like [... [more]
BLAST of MELO3C028984.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C028984.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3C3E83.6e-1786.67aminoacylase-1-like OS=Cucumis melo OX=3656 GN=LOC103496230 PE=4 SV=1[more]
A0A5A7SUZ19.9e-1592.16Small G protein signaling modulator 3 OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A5D3C5S04.2e-1388.24TBC1 domain family member 2A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A5A7TYH65.4e-1384.62CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1468G0... [more]
A0A5D3CQ421.6e-1289.58Aminoacylase-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G... [more]
BLAST of MELO3C028984.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C028984MELO3C028984gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C028984.1:exon:12072MELO3C028984.1:exon:12072exon
MELO3C028984.1:exon:12071MELO3C028984.1:exon:12071exon
MELO3C028984.1:exon:12070MELO3C028984.1:exon:12070exon
MELO3C028984.1:exon:12069MELO3C028984.1:exon:12069exon
MELO3C028984.1:exon:12068MELO3C028984.1:exon:12068exon
MELO3C028984.1:exon:12067MELO3C028984.1:exon:12067exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C028984.1:cdsMELO3C028984.1:cdsCDS
MELO3C028984.1:cdsMELO3C028984.1:cds_2CDS
MELO3C028984.1:cdsMELO3C028984.1:cds_3CDS
MELO3C028984.1:cdsMELO3C028984.1:cds_4CDS
MELO3C028984.1:cdsMELO3C028984.1:cds_5CDS
MELO3C028984.1:cdsMELO3C028984.1:cds_6CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C028984.1MELO3C028984.1-proteinpolypeptide