MELO3C028834.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C028834.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Sporulation-specific protein 15-like isoform X2
Location	chr01: 24093805 .. 24094032 (+)
Sequence length	228
RNA-Seq Expression	MELO3C028834.1
Synteny	MELO3C028834.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGGTGCCTAAAGGTTGGGATAAGCTATTTGTATATGTAATTTCTGAGCAAACTGGGAAGACAATTGTTAGGTCAAGCAAAGCATCAGTTCGTAATGGAAGTTGCCAGTGGACTGAGACTTTATCAGATTCCATTTGGGTTTCACAAGATGAAGTTTCTAAGGAGTTTGAGGATTGTAATTTCAAGCTTGTTGCGGCCATGGTACTGTTGTTTGAGCTTTATGAGTAA

mRNA sequence

CAGGTGCCTAAAGGTTGGGATAAGCTATTTGTATATGTAATTTCTGAGCAAACTGGGAAGACAATTGTTAGGTCAAGCAAAGCATCAGTTCGTAATGGAAGTTGCCAGTGGACTGAGACTTTATCAGATTCCATTTGGGTTTCACAAGATGAAGTTTCTAAGGAGTTTGAGGATTGTAATTTCAAGCTTGTTGCGGCCATGGTACTGTTGTTTGAGCTTTATGAGTAA

Coding sequence (CDS)

CAGGTGCCTAAAGGTTGGGATAAGCTATTTGTATATGTAATTTCTGAGCAAACTGGGAAGACAATTGTTAGGTCAAGCAAAGCATCAGTTCGTAATGGAAGTTGCCAGTGGACTGAGACTTTATCAGATTCCATTTGGGTTTCACAAGATGAAGTTTCTAAGGAGTTTGAGGATTGTAATTTCAAGCTTGTTGCGGCCATGGTACTGTTGTTTGAGCTTTATGAGTAA

Protein sequence

QVPKGWDKLFVYVISEQTGKTIVRSSKASVRNGSCQWTETLSDSIWVSQDEVSKEFEDCNFKLVAAMVLLFELYE

Homology

[Close]

BLAST of MELO3C028834.1 vs. NCBI nr
Match: KAA0042211.1 (sporulation-specific protein 15-like isoform X2 [Cucumis melo var. makuwa] >TYK26782.1 sporulation-specific protein 15-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 150.6 bits (379), Expect = 5.4e-33
Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 1   QVPKGWDKLFVYVISEQTGKTIVRSSKASVRNGSCQWTETLSDSIWVSQDEVSKEFEDCN 60
           +VPKGWDKLFVYVISEQTGKTIVRSSKASVRNGSCQW ETLSDSIWVSQDEVSKEFEDCN
Sbjct: 140 KVPKGWDKLFVYVISEQTGKTIVRSSKASVRNGSCQWIETLSDSIWVSQDEVSKEFEDCN 199

Query: 61  FKLVAAMVLLFELYE 76
           FKLVAAMVLLFELYE
Sbjct: 200 FKLVAAMVLLFELYE 214

[Close]

BLAST of MELO3C028834.1 vs. NCBI nr
Match: KAA0043953.1 (sporulation-specific protein 15-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 132.9 bits (333), Expect = 1.2e-27
Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  QVPKGWDKLFVYVISEQTGKTIVRSSKASVRNGSCQWTETLSDSIWVSQDEVSKEFEDCN 60
          QVPKGWDKLFV VISEQTGKTI+RSSKASVRNGSCQWTE+LSDSIWVSQDEVSKEFEDCN
Sbjct: 27 QVPKGWDKLFVSVISEQTGKTIIRSSKASVRNGSCQWTESLSDSIWVSQDEVSKEFEDCN 86

Query: 61 FKLVAAM 68
          FKLV AM
Sbjct: 87 FKLVVAM 93

[Close]

BLAST of MELO3C028834.1 vs. NCBI nr
Match: XP_008442756.1 (PREDICTED: sporulation-specific protein 15-like isoform X3 [Cucumis melo])

HSP 1 Score: 132.9 bits (333), Expect = 1.2e-27
Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  QVPKGWDKLFVYVISEQTGKTIVRSSKASVRNGSCQWTETLSDSIWVSQDEVSKEFEDCN 60
          QVPKGWDKLFV VISEQTGKTI+RSSKASVRNGSCQWTE+LSDSIWVSQDEVSKEFEDCN
Sbjct: 27 QVPKGWDKLFVSVISEQTGKTIIRSSKASVRNGSCQWTESLSDSIWVSQDEVSKEFEDCN 86

Query: 61 FKLVAAM 68
          FKLV AM
Sbjct: 87 FKLVVAM 93

[Close]

BLAST of MELO3C028834.1 vs. NCBI nr
Match: XP_008442757.1 (PREDICTED: sporulation-specific protein 15-like isoform X4 [Cucumis melo])

HSP 1 Score: 132.9 bits (333), Expect = 1.2e-27
Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  QVPKGWDKLFVYVISEQTGKTIVRSSKASVRNGSCQWTETLSDSIWVSQDEVSKEFEDCN 60
          QVPKGWDKLFV VISEQTGKTI+RSSKASVRNGSCQWTE+LSDSIWVSQDEVSKEFEDCN
Sbjct: 27 QVPKGWDKLFVSVISEQTGKTIIRSSKASVRNGSCQWTESLSDSIWVSQDEVSKEFEDCN 86

Query: 61 FKLVAAM 68
          FKLV AM
Sbjct: 87 FKLVVAM 93

[Close]

BLAST of MELO3C028834.1 vs. NCBI nr
Match: XP_008442754.1 (PREDICTED: sporulation-specific protein 15-like isoform X1 [Cucumis melo])

HSP 1 Score: 132.9 bits (333), Expect = 1.2e-27
Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  QVPKGWDKLFVYVISEQTGKTIVRSSKASVRNGSCQWTETLSDSIWVSQDEVSKEFEDCN 60
          QVPKGWDKLFV VISEQTGKTI+RSSKASVRNGSCQWTE+LSDSIWVSQDEVSKEFEDCN
Sbjct: 27 QVPKGWDKLFVSVISEQTGKTIIRSSKASVRNGSCQWTESLSDSIWVSQDEVSKEFEDCN 86

Query: 61 FKLVAAM 68
          FKLV AM
Sbjct: 87 FKLVVAM 93

[Close]

BLAST of MELO3C028834.1 vs. ExPASy TrEMBL
Match: A0A5A7TKW5 (Sporulation-specific protein 15-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G00820 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.6e-33
Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 1   QVPKGWDKLFVYVISEQTGKTIVRSSKASVRNGSCQWTETLSDSIWVSQDEVSKEFEDCN 60
           +VPKGWDKLFVYVISEQTGKTIVRSSKASVRNGSCQW ETLSDSIWVSQDEVSKEFEDCN
Sbjct: 140 KVPKGWDKLFVYVISEQTGKTIVRSSKASVRNGSCQWIETLSDSIWVSQDEVSKEFEDCN 199

Query: 61  FKLVAAMVLLFELYE 76
           FKLVAAMVLLFELYE
Sbjct: 200 FKLVAAMVLLFELYE 214

[Close]

BLAST of MELO3C028834.1 vs. ExPASy TrEMBL
Match: A0A5D3DNJ0 (Sporulation-specific protein 15-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003140 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.6e-28
Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  QVPKGWDKLFVYVISEQTGKTIVRSSKASVRNGSCQWTETLSDSIWVSQDEVSKEFEDCN 60
          QVPKGWDKLFV VISEQTGKTI+RSSKASVRNGSCQWTE+LSDSIWVSQDEVSKEFEDCN
Sbjct: 27 QVPKGWDKLFVSVISEQTGKTIIRSSKASVRNGSCQWTESLSDSIWVSQDEVSKEFEDCN 86

Query: 61 FKLVAAM 68
          FKLV AM
Sbjct: 87 FKLVVAM 93

[Close]

BLAST of MELO3C028834.1 vs. ExPASy TrEMBL
Match: A0A5A7TKE9 (Sporulation-specific protein 15-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G002970 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.6e-28
Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  QVPKGWDKLFVYVISEQTGKTIVRSSKASVRNGSCQWTETLSDSIWVSQDEVSKEFEDCN 60
          QVPKGWDKLFV VISEQTGKTI+RSSKASVRNGSCQWTE+LSDSIWVSQDEVSKEFEDCN
Sbjct: 27 QVPKGWDKLFVSVISEQTGKTIIRSSKASVRNGSCQWTESLSDSIWVSQDEVSKEFEDCN 86

Query: 61 FKLVAAM 68
          FKLV AM
Sbjct: 87 FKLVVAM 93

[Close]

BLAST of MELO3C028834.1 vs. ExPASy TrEMBL
Match: A0A1S3B5Z1 (sporulation-specific protein 15-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103486536 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.6e-28
Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  QVPKGWDKLFVYVISEQTGKTIVRSSKASVRNGSCQWTETLSDSIWVSQDEVSKEFEDCN 60
          QVPKGWDKLFV VISEQTGKTI+RSSKASVRNGSCQWTE+LSDSIWVSQDEVSKEFEDCN
Sbjct: 27 QVPKGWDKLFVSVISEQTGKTIIRSSKASVRNGSCQWTESLSDSIWVSQDEVSKEFEDCN 86

Query: 61 FKLVAAM 68
          FKLV AM
Sbjct: 87 FKLVVAM 93

[Close]

BLAST of MELO3C028834.1 vs. ExPASy TrEMBL
Match: A0A1S3B6G6 (sporulation-specific protein 15-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486536 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.6e-28
Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  QVPKGWDKLFVYVISEQTGKTIVRSSKASVRNGSCQWTETLSDSIWVSQDEVSKEFEDCN 60
          QVPKGWDKLFV VISEQTGKTI+RSSKASVRNGSCQWTE+LSDSIWVSQDEVSKEFEDCN
Sbjct: 27 QVPKGWDKLFVSVISEQTGKTIIRSSKASVRNGSCQWTESLSDSIWVSQDEVSKEFEDCN 86

Query: 61 FKLVAAM 68
          FKLV AM
Sbjct: 87 FKLVVAM 93

[Close]

BLAST of MELO3C028834.1 vs. TAIR 10
Match: AT1G22060.1 (LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G22000.1); Has 84739 Blast hits to 38714 proteins in 2257 species: Archae - 1436; Bacteria - 11314; Metazoa - 40747; Fungi - 7706; Plants - 4675; Viruses - 308; Other Eukaryotes - 18553 (source: NCBI BLink). )

HSP 1 Score: 56.6 bits (135), Expect = 9.9e-09
Identity = 24/63 (38.10%), Postives = 42/63 (66.67%), Query Frame = 0


Query: 5  GWDKLFVYVISEQTGKTIVRSSKASVRNGSCQWTETLSDSIWVSQDEVSKEFEDCNFKLV 64
          GWDKLF+  I   + K   +++KA VRNG+C+W + + ++  + QD  +K+F++  +K+V
Sbjct: 31 GWDKLFISFIPADSVKATAKTTKALVRNGTCKWGDPIYETTRLLQDTRTKQFDEKLYKIV 90

Query: 65 AAM 68
           AM
Sbjct: 91 VAM 93

The following BLAST results are available for this feature:

BLAST of MELO3C028834.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0042211.1	5.4e-33	97.33	sporulation-specific protein 15-like isoform X2 [Cucumis melo var. makuwa] >TYK2...	[more]
KAA0043953.1	1.2e-27	94.03	sporulation-specific protein 15-like isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008442756.1	1.2e-27	94.03	PREDICTED: sporulation-specific protein 15-like isoform X3 [Cucumis melo]	[more]
XP_008442757.1	1.2e-27	94.03	PREDICTED: sporulation-specific protein 15-like isoform X4 [Cucumis melo]	[more]
XP_008442754.1	1.2e-27	94.03	PREDICTED: sporulation-specific protein 15-like isoform X1 [Cucumis melo]	[more]

BLAST of MELO3C028834.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C028834.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TKW5	2.6e-33	97.33	Sporulation-specific protein 15-like isoform X2 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5D3DNJ0	5.6e-28	94.03	Sporulation-specific protein 15-like isoform X1 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5A7TKE9	5.6e-28	94.03	Sporulation-specific protein 15-like isoform X1 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3B5Z1	5.6e-28	94.03	sporulation-specific protein 15-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3B6G6	5.6e-28	94.03	sporulation-specific protein 15-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of MELO3C028834.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22060.1	9.9e-09	38.10	LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 gro...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47270	PROTEIN MLP1-LIKE	coord: 1..67
IPR019448	NT-type C2 domain	PROSITE	PS51840	C2_NT	coord: 1..75 score: 13.48274

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C028834	MELO3C028834	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C028834.1:exon:25687	MELO3C028834.1:exon:25687	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C028834.1:cds	MELO3C028834.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C028834.1	MELO3C028834.1-protein	polypeptide