MELO3C020894.jh1.t1 (mRNA) Melon (Harukei-3) v1.41

Overview


Name	MELO3C020894.jh1.t1
Type	mRNA
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	RNA-binding protein Musashi homolog 1
Location	chr11: 2224315 .. 2232471 (-)
Sequence length	1686
RNA-Seq Expression	MELO3C020894.jh1.t1
Synteny	MELO3C020894.jh1.t1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAGATAGAGACGAGGAGAGAGAGAGAGAGATAGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCTGCGTTTAGGGTTTTCTTGAAATCTCAGAAATTTTGATAAAAAGGTCAGTTGAGCGCGTTATCCACGAATATCTACTGTTTTTGTCTGTTTGATTTGTTATTTTGAGCTCTTTATTCGCAAAGAAGAATTTGAAACAGGGAAAAAAAAATGATGAATTTGGTGAGATTGCTCTGGTATTTAGCTATTGTGTGTGAGAAAGAGGTGTGCCTCTTCTTGTTATCATGTGCAGGGAGCGAGTGCGAGAGATTTGGGGAGAGTGAGCGTGGGTCTTTGAGCGAGCGAGCGAGCGAGGAAGAAGAGGAGGAGAGAGTGATATACTTTTTCACTTTTAGGGTTCAATTTCTCTGTCTTACCTGCGCCCATTCATCATGGATCGGAAGCTGGTGGTTAGTATTTTCTTTTCTCTTTTTCCCTATTTAGCTACGTCTTTGTGATTTTTCAGCTGTATAAGCTATTAAGTAATCTGGTTTACCCATTGGGTTTTTTTTATTACCGATTTGATTTGCTCTGTTTATTTCTTTAATGAAATTTAGGTTCTTGGTATTCCATGGGACGTCGATACAGAAGGGCTGAGAGAATACATGAGCAAATTTGGGGAGTTGGAGGATTGTATTGTTATGAAGGTTTGCCTTTTGCTATTCTTATTGTGGTACTACATTCATTTTTCCGTTCTTTCTATGGTTTTTAAAAAGCACGCTTTTGTCTTGAACCTAGTGTTATTAGAACTGTGACTGCTCACTCTACCGCAATGGTCCTCTGGGTTGAAGCCCGCCCAAGCCACAGAATTATAAATTACTTTAAATAATATTTTCTATACACGAAAATGAATAGTATTATGGCTATTAAGATAGTGAAATGTTGGCGAATGTATATGGTGTGCCTAAGAAATGAGTAAGCTAAGGAGTGAGTTCTTGAAGAATCAAATCACGAAACTTTATTTTCATTGAAAGTGTATTTAAACTCATGCGAGGAACCCTTTTCTATAGGGGACTAAACATAAATGAGGGTAAAAAGGATAAACCTTTGGATTTGCCAAAATTACCCTAATCCTACCTCCATCATTCTATCCCTCCCCAAAGAAACTTGTCTTCTGAGTTTTAAAAAGATGATATGACTCATGTAATGAAGCGCTATGAAACCAACTATCTACATCTGGTACAAAAAATTTTTGATCAAAGAAACACAGCCTAGGTACAAAAAGGCTTAGCATTGCAAGAATGAATTCATCCAATGCAACAAACCAAAAACCACCTGCAGAAGAATCGTTTGGTGAAGAAAACTCAGAAATTTTTTTAAGAAAATTTAATGTGTTTTGGGATGATGGATTGAGTCATTTGGGTATGGGTTGGGTCATAGGCTAGGAATTGGGACTGGCTGTGTGGGCCTAGGGTTTAAAAACCCAAAAAATTGTTCGAAGACGTGGATTGCAATATTTGACGCAAATCACATGGGTTTAGACTATCAGTGTTACAATTCTCAATTTGCTTGGGAATGGGTTCGGGTTAGGTTGATTGGTTATGAGGGTGTTGCGGAGAAACTCTTTGCAACCAAAATTTACTTCGTCACCTCCTCATTTTAATTTTTTGTTCTCAACAATCACGCTTGATTTCTCCATTGGATTGGGTCGTCCAAGCTCCGATTTGGAAAAAAATCTTGCCGACCTCATCATCTTTGCGCACGACAATGTCTAGGTTTCTCACCATATTTTGAATTGAGTCGCTCATGGTTGCTATCTTCTTCCTCTGCTTCAAGATCTTCAAATTCTCTTTCTTCTTCTTCTTTGTTTGATTACTTTACTTAAGTTCTTGTCTACTATTTCAAAACCTCCTCCCATGCTTGCGACTTGGTTTTTCGTGTTGATATTTGCAACTTCGGTGTTCATTCCTCGATTTGGCTTTGACTTTGGTTGCTCAAATTTCATTTTGACTTCGTGTGGCTTCTACAAGATCAAATCTTCATCCACACATTTGCTTTTTTCTTTCTTCTCTGAAAATTCCATATGGGTTTTTGCCCAAATTCATTCTCTTGATTGAATTCTTGATTTTGTTGAATTACTTCTGCATCATTCAAACAACACTGTTCCTTTATTTAATTCTTCTCGTTCTCTGAAATGTAATTCAAATTTTAAATCATTTTTCTCAAGTTATGCTGTATTTTGAACTCTTCTTCCATCATCTCCTCCATTGCTGTAGCCTGTAGGGTTGATGTGGGAATTGGGTGTTCTTGAATTGGCTTGTCTTTCATTACCAAGATAGTAATCTTTGTCCCTAAACATATTTGTTGTCTTGCAAAGGACGATTCTATGAAGCTCTTCTACCTTAAAAGGTTTCTCCTTGTAATTACACATTGCTGTTTACAACGAACATAGCTCATGATGATTATTGGCAAAAGTTTTTCGGTCTTCCACCAGTGGTAGTCAACATTGGCTCAAGTGATTTCTCTGATACCTAATTGATGTAACCTAGGAATGACTAAGGACGAAGGAGTGAATTCTCCAAGAATCCAACAACAATAACCTCATTATCGATCAAAGTGTATTCAATATTGGAGAGGGGCCCCTAATTATAAGGAAATAAACGCAAGTGAGGATAAAAAGGATTAACCTAGGGATTTACCAAAATTACTCTAATCTGTCCTCCATCAACCGAGCTTTTTATTAGAGATTGCGGAGATAAATGATTCCTCTTTATGAGTACATTTTAGTTTCTTCATAAAACATTACTTAAAAGAAAAATTTGGCTTCAATCATCAAAGTGTGCATCCCTAGCTTTGTGAGTTTGCGACGCTTCGACTTCAAGCAAAGCCCTATGAAGGGCGCCTCACTTTTTCTGAAGCCACATGGCCATTGACCTAAGGCGTCTACTTCTAAGAAATTTTCCAAACCATTCATTTGGCCTTGTTCTCTAGAAATTTGAACTCTTTTAGAGTTTTCTCCTGGTGGCTCTTGTTGGGCTATGGATTTTGTGCGTGTTTTGTAACTTTTGCAGTTTCATTTATTTATTGTTAACGTTTACGTAATGGAAGTTGCTCTCTTGATGAAATAAGATTTTTATTGGCTTTGTTTTACTGGTGGATTCTACACATGAAGATAGTGAATGCTTTTTGAGACCAATTTTGTGTTGTTACGACCTTTTATTTTCTAGTTCTTTTATCTTTATAGCCATATGTTTTTTTTTTTTAAATTTCAGGAGAGGTCAACTGGTCGGTCTCGTGGTTTTGGATACGTGACATTTGCAACCGATGAAGATGCTAAGGTAGGAATATGTTAATCATTTTCTCTTTCAATGGACTTGATGTCTGTTTACTCCTAACATCTCTCTGTTGCAGAATGCACTGTCAAGTGAGCACTTTCTTGGCAACAGAATGATGGAAGTTAAAGTTGCCACACCTAAAGTTAGTCTGTCTCTCTCGCTCTCTCTTCTTTACTTGTCTGCACTCGCTTGCGCACATTTTCCTTATGCAGAGTGGTCTTTGTTTTATCTTCCTGTTTGTTTCTTTTTTCTTTTTAATAAATAAATCATAAGAAGTGTGAGTACTTTGTTTTGATGTGTATGCATTCAACTTAATTGGGCGTGGACTTCATATTTTTCTGTTGACAGGAGGAGATGAGAGCACCTCCTAAGAGAGTCACAAGGATTTTTGTAGCAAGAATCTCACAAACTGTGACCGAGGCTGCCTTTCGCAGGTAGTTTGTTGTGATTTTCTGCTATTCCTTCTTTTTCTTTTTATTTTTGACCTTTCGAAAATGAAAGATGAGGTTGTCACATTTGAAGTTGAAACATATGTTTTGACTTGAAATGCAACCCCTGGTAATGATCTTGATAGCTGTCTAAATGTTAAATCAACTAACTTGTTCATTTCTGGAACTGAAATGGAAGAATCTTATAGATTAGGGATGAATGGTTAATTTTAAGGAGGATTTATGATAAAAATCTGGCCCTTTCTTAAGCATATTTCCTTTTTTTTCGGGTCGCTCCATACTTGAAGTCTACAGAACGTGGACATTTTAGCTAGGATAATATTATTCTATCCTTCATGTGTTGAACAGTGTATCTAAAAAAAATAGTGATATTGGACAAAATAATATATTTTTCGGAGTAAAATTCAGCAGTATTTTCTATAGCATACAGATCCACAGGCTTACCAACTTCAGATTTCCTTACGTATAAAAACTATATATTTAGGACAATTTATATTCTAATTACTGTGTTCTTCGTATTGTTGTCTGTGTTTGGGCTCTTTTAGAAGAGAAACACATTTCATTTATGGTTTTTTAATATTTTCTTGCAGTCATTTTGAGAAATATGGAGAGATAACAGATCTTTACATGCCAAAGGTACGGATTCTTTTTTACTAAAGTGGGAAATTAGTTCTGTGGTTCTACTACCAAGTTACCAACTGTCTTGTGCTAGAGTAAATTAGGAAGGGATATTTTATTTTCACTTTCACTTATCAGGAGTTCATGTACTAAGCAAATTAGGAAATATTATTTTATATGATGATTTGATGACAACATATGGTTCACCCATGCTTATGTGCACAATCTATAGTGTATTACTGACATGATTTAATGTTTACTTGATTAATTATTCAGGACCAGGGATCAAAAACCCATCGTGGAATAGGTTTCATCACTTTTGCAAGTTCAGGTTGGATTATGTTTGTATATTGATATATGATTGTAGAGTTCAAGTTGCCAATTTTAGTCTCACTGGTAAGACAAGTCAACCTTTTTGTAGTGTGTCTTGCCTTGTTTCTTGAATTTAAAGTTTATAAAAAAAGAAAAAAAAATGATAACCATCATGGGTTAGCCTAATGGTGAATAAGGGAGCATCCCTTTGATAAAGGGCTAAGAGGTAATAGGTTCAATCCATGGTGGCCACCTACCTAGGATTTAATATTCTAAGAGGTTTTTTGACACTCAAATGTTGTAGGGTCAAGCGAGTTGTCCCATGAAATTAGTTGAGGTATGGGTAAGCTGACCCAGATACTCACAGACGGAGGAAGTTCGTTTTATCAATGATTTTGTCCTACTCCTATTAAGCTCAGTACACTTAAGTTTGAATAATGTGTGCACTGCTGGTGTCCAAGAGGCGTTGGACACTCCAATGCTTAGATATTTGTTAGCTTAATACACATGTATGGGACACTAGTTGCCCTTGGTACAAATGGACTACGAGTTGAGGAAATTTGATTGACATGCATTGAACATTTGTTAATCATAATAAATAGATAAGCAGTAACTTATGTCATAAACAATAAAGTTTGAGGTGAAATTGCACAAAAAATGCTTGATGTAAATTTTAATAACTTTAATATATACTTTTAAGACTGTAAATTGAAATAAGTGTATTATTAGATTTTAAAAATAAAATGTGACATCATATTTGTTTTTAGGATGGATTTTTCTTTTCTTTTCCTTTTTCTGGGGATTTTCTATGAAACATTTAGTTGAAGAGTATAAGCAGCTGAGTTTTAGTGAATTGAGAGTGCGTGGGATAGGATGTACCCACGTTAATGTTTCATAATCATTGCTTCATTGCTAAAACTGTTGCTCATAATGTTTTGTCAGCTGGTAGCTACTCTAAATAGTTCTCATTTGTGTCTTTGTGACTAACTTAAACTTTTTGTTTTTTATTTTTCTCTCTTTGGTTGTACTTCATCGTGCTTCATGAGAAAGCTCTCTAGGGTTTTTGCCCCTTTTTAGCATACCTTTTGCTTGATATTTCTATCTTCTAATTTTTTTCTTGAAAATCTGCATTGTTTTCACATTGACAAAAAGTTTCCTTTTCATGGTTGCCAATGGTTTCCACTTCAAGACACTGAAGGTTTTCTATCTTATCTTGCAGATTCTGTGGAAAATTTGATGGCTGATACTCATGAATTAGGAGGTTCTACTGTGGTTGTTGATAGAGCGACCCCCAAGGCAAGAATTTAACACCATGTTTACCTTCTGGATAATTTTCAGTCAGCATTAAATATGTACGTCTAATTAAAGGTTCCTATATTATGTTTCCAGGATGATGATTTCAGGCCCATAGGGAAAATGCCGCAGGGGGGTGGTGGGGGTGGATATGGTGCATACAATGCTTATATTTCTGCCGCAACTAGATATGCAGCACTTGGTGCTCCTACCTTATATGACCATCCAGGCTCAGTTTATGGGAGTACGTATCCCTGACAGGACCCTTGTTCATGTGATGTACCCTTGTTCATGTGATGCTTGGTCTAGGTAAACATTGTTATGATGATTTACCTTGTAATTGGATCAGGAAGGGAATTTCGAGGGATGGGAAAAAAGATTTTTGTTGGTAGGCTCCCACAAGAAGCATCTGCTGATGATCTTCGCCAGTACTTTGGTAGATTTGGCCGTATACTGGATGTCTATGTTCCAAAGGTAAAAACTAGATTTAGTTAATACTGACTTTGTGAGACCGGCTGATTAGAGATATAAGCCTAAAGATCCAGTTGTTAATGATTTATATAGGATCCTAAAAGATCTGGCCATCGAGGTTTTGGTTTTGTAACTTTTGCTGAAGATGGTGTAGCAGATCGTGTATCTCGAAGATCTCATGAGATTTGTGGACAACAGGTATATGTGTGTCACTTTGCTTACTAGAAGGAAGCATAATTGTCTGTTTGAACGTTGCTAGAACATTTAGAATAGAGTTTTTATTATTATAACCTAATTGATATATACATGCTTGTAGACATGGACATGAAACACTGGAATTCCATATATACACTACAAACATCCACACACTTTCTAAAGTGCAATTACATGCTCATTTTAAGTTCGAACTTTCTTGGGTGCGGATCCCTTTCTGTAATTTTCTTTTTTGTTTCCTCTGTTGAGGCTCTCTCAGTGGTGGGCTCGTTGATTCTTTTTACTTCAATCATGTATATAATCTTACCGTTGGATTCTGTAGGTTGCTATTGATTCAGCCACTCCTCTTGATGATGCTGGAGCTGGAGCTGGAGCATCTGGAGCCAGTGGAACTTTTATGATGAATAGCGCTGCTGACTCTTTTGGCGGCTATGTGGGGCCTATGAGGACTTATGGAAGGATGTACGGAAGCCTGGACTTCGATGATGTAAGTGCTTCTGTTTTGCTTCCTATTTGAATTATATTCAAGTTGCCTAAAGTTTAGGTGGTGGTTGGCTGGTTGTCCACCACATTTAGGTGATCTTTACATTTACTGGTAAATCCATTTTTCTAAAAAGTCCAAAAGACTCGCCATGTTGAGATTAATTTGGTACATTATCAATAAGTTACCTTAATTATATATCATGAGATGGACTATTCAGTTTAGAATCTTTAGAAGAAACTCCATAATAATAAAAGATAGTTCACCAATCTAGGATTTAATGTCTTACAAGCTTTCTTGACACTCAAATGTTGTACAGTTAAATGAGTTGCCACACGACACAAACGCTCACATATTTTTTTAAAAATAACAATAATAAAATAAAATAATTTTAATCTTTAACGGGCATTGATGTCGTGACATTGTTTGAAGATACCACTAGCAAGTATATATTAGAAAAAATACTTGAGAGTTCATTTAAATGTTTAGTTTAAAATTTTAGAAAGTGCCTTTTGGAGTAAACAATACAACACAAGTAAGAGTTTATGATAGTTACCTTTTGAGTGGTTTTGTTTGTTTGTTTTTAAGATTAGTTCGTTATTCTTGATACAGTGGGGCTATGGAATTGGTGGTGGAAGACCATCTAGAGCGGACTGGAGGTATCGGCCATACTAGAGAGAGCCACCACACCTTCATTCTTATAAATAAATCAACAGAAATGAATTCCTCGGCCCTATTTATGAGCAACATATTCTGAGTTTTGGCCTTTGTAGAGTAATCTTTGGATGTATGTTTATTGCATTCTTTCCTAACTGAAACATAACGTGTCGGATTCGGTCAGGGTTTGGAGGGTAGGTTGGCTGTTTGTACCCTTGGTTAGAAGTTATTAGTTAGTTGTATTCTTCTCTAACTCTTGCTTCAAGAAAACTCATTTTACGAATTTTTCTTTTTAGAATGGTTTGGTTTTCCACGGGCAATTAATTA

mRNA sequence

GAGAGATAGAGACGAGGAGAGAGAGAGAGAGATAGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCTGCGTTTAGGGTTTTCTTGAAATCTCAGAAATTTTGATAAAAAGGGAGCGAGTGCGAGAGATTTGGGGAGAGTGAGCGTGGGTCTTTGAGCGAGCGAGCGAGCGAGGAAGAAGAGGAGGAGAGAGTGATATACTTTTTCACTTTTAGGGTTCAATTTCTCTGTCTTACCTGCGCCCATTCATCATGGATCGGAAGCTGGTGGTTCTTGGTATTCCATGGGACGTCGATACAGAAGGGCTGAGAGAATACATGAGCAAATTTGGGGAGTTGGAGGATTGTATTGTTATGAAGGAGAGGTCAACTGGTCGGTCTCGTGGTTTTGGATACGTGACATTTGCAACCGATGAAGATGCTAAGAATGCACTGTCAAGTGAGCACTTTCTTGGCAACAGAATGATGGAAGTTAAAGTTGCCACACCTAAAGAGGAGATGAGAGCACCTCCTAAGAGAGTCACAAGGATTTTTGTAGCAAGAATCTCACAAACTGTGACCGAGGCTGCCTTTCGCAGTCATTTTGAGAAATATGGAGAGATAACAGATCTTTACATGCCAAAGGACCAGGGATCAAAAACCCATCGTGGAATAGGTTTCATCACTTTTGCAAGTTCAGATTCTGTGGAAAATTTGATGGCTGATACTCATGAATTAGGAGGTTCTACTGTGGTTGTTGATAGAGCGACCCCCAAGGATGATGATTTCAGGCCCATAGGGAAAATGCCGCAGGGGGGTGGTGGGGGTGGATATGGTGCATACAATGCTTATATTTCTGCCGCAACTAGATATGCAGCACTTGGTGCTCCTACCTTATATGACCATCCAGGCTCAGTTTATGGGAGAAGGGAATTTCGAGGGATGGGAAAAAAGATTTTTGTTGGTAGGCTCCCACAAGAAGCATCTGCTGATGATCTTCGCCAGTACTTTGGTAGATTTGGCCGTATACTGGATGTCTATGTTCCAAAGGATCCTAAAAGATCTGGCCATCGAGGTTTTGGTTTTGTAACTTTTGCTGAAGATGGTGTAGCAGATCGTGTATCTCGAAGATCTCATGAGATTTGTGGACAACAGGTTGCTATTGATTCAGCCACTCCTCTTGATGATGCTGGAGCTGGAGCTGGAGCATCTGGAGCCAGTGGAACTTTTATGATGAATAGCGCTGCTGACTCTTTTGGCGGCTATGTGGGGCCTATGAGGACTTATGGAAGGATGTACGGAAGCCTGGACTTCGATGATTGGGGCTATGGAATTGGTGGTGGAAGACCATCTAGAGCGGACTGGAGGTATCGGCCATACTAGAGAGAGCCACCACACCTTCATTCTTATAAATAAATCAACAGAAATGAATTCCTCGGCCCTATTTATGAGCAACATATTCTGAGTTTTGGCCTTTGTAGAGTAATCTTTGGATGTATGTTTATTGCATTCTTTCCTAACTGAAACATAACGTGTCGGATTCGGTCAGGGTTTGGAGGGTAGGTTGGCTGTTTGTACCCTTGGTTAGAAGTTATTAGTTAGTTGTATTCTTCTCTAACTCTTGCTTCAAGAAAACTCATTTTACGAATTTTTCTTTTTAGAATGGTTTGGTTTTCCACGGGCAATTAATTA

Coding sequence (CDS)

ATGGATCGGAAGCTGGTGGTTCTTGGTATTCCATGGGACGTCGATACAGAAGGGCTGAGAGAATACATGAGCAAATTTGGGGAGTTGGAGGATTGTATTGTTATGAAGGAGAGGTCAACTGGTCGGTCTCGTGGTTTTGGATACGTGACATTTGCAACCGATGAAGATGCTAAGAATGCACTGTCAAGTGAGCACTTTCTTGGCAACAGAATGATGGAAGTTAAAGTTGCCACACCTAAAGAGGAGATGAGAGCACCTCCTAAGAGAGTCACAAGGATTTTTGTAGCAAGAATCTCACAAACTGTGACCGAGGCTGCCTTTCGCAGTCATTTTGAGAAATATGGAGAGATAACAGATCTTTACATGCCAAAGGACCAGGGATCAAAAACCCATCGTGGAATAGGTTTCATCACTTTTGCAAGTTCAGATTCTGTGGAAAATTTGATGGCTGATACTCATGAATTAGGAGGTTCTACTGTGGTTGTTGATAGAGCGACCCCCAAGGATGATGATTTCAGGCCCATAGGGAAAATGCCGCAGGGGGGTGGTGGGGGTGGATATGGTGCATACAATGCTTATATTTCTGCCGCAACTAGATATGCAGCACTTGGTGCTCCTACCTTATATGACCATCCAGGCTCAGTTTATGGGAGAAGGGAATTTCGAGGGATGGGAAAAAAGATTTTTGTTGGTAGGCTCCCACAAGAAGCATCTGCTGATGATCTTCGCCAGTACTTTGGTAGATTTGGCCGTATACTGGATGTCTATGTTCCAAAGGATCCTAAAAGATCTGGCCATCGAGGTTTTGGTTTTGTAACTTTTGCTGAAGATGGTGTAGCAGATCGTGTATCTCGAAGATCTCATGAGATTTGTGGACAACAGGTTGCTATTGATTCAGCCACTCCTCTTGATGATGCTGGAGCTGGAGCTGGAGCATCTGGAGCCAGTGGAACTTTTATGATGAATAGCGCTGCTGACTCTTTTGGCGGCTATGTGGGGCCTATGAGGACTTATGGAAGGATGTACGGAAGCCTGGACTTCGATGATTGGGGCTATGGAATTGGTGGTGGAAGACCATCTAGAGCGGACTGGAGGTATCGGCCATACTAG

Protein sequence

MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSTVVVDRATPKDDDFRPIGKMPQGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPLDDAGAGAGASGASGTFMMNSAADSFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY

Homology

[Close]

BLAST of MELO3C020894.jh1.t1 vs. NCBI nr
Match: XP_008457826.1 (PREDICTED: RNA-binding protein Musashi homolog 1 [Cucumis melo] >XP_008457827.1 PREDICTED: RNA-binding protein Musashi homolog 1 [Cucumis melo])

HSP 1 Score: 753 bits (1944), Expect = 1.42e-274
Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0


Query: 1   MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60
           MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA
Sbjct: 1   MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60

Query: 61  LSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDL 120
           LSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDL
Sbjct: 61  LSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDL 120

Query: 121 YMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSTVVVDRATPKDDDFRPIGKMPQ 180
           YMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSTVVVDRATPKDDDFRPIGKMPQ
Sbjct: 121 YMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSTVVVDRATPKDDDFRPIGKMPQ 180

Query: 181 GGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQEASAD 240
           GGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQEASAD
Sbjct: 181 GGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQEASAD 240

Query: 241 DLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSA 300
           DLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSA
Sbjct: 241 DLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSA 300

Query: 301 TPLDDAGAGAGASGASGTFMMNSAADSFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPS 360
           TPLDDAGAGAGASGASGTFMMNSAADSFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPS
Sbjct: 301 TPLDDAGAGAGASGASGTFMMNSAADSFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPS 360

Query: 361 RADWRYRPY 369
           RADWRYRPY
Sbjct: 361 RADWRYRPY 369

[Close]

BLAST of MELO3C020894.jh1.t1 vs. NCBI nr
Match: XP_011649346.1 (RNA-binding protein Musashi homolog 1 isoform X2 [Cucumis sativus] >XP_031737421.1 RNA-binding protein Musashi homolog 1 isoform X2 [Cucumis sativus] >KGN62007.1 hypothetical protein Csa_006754 [Cucumis sativus])

HSP 1 Score: 746 bits (1926), Expect = 8.48e-272
Identity = 368/371 (99.19%), Postives = 368/371 (99.19%), Query Frame = 0


Query: 1   MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60
           MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA
Sbjct: 1   MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60

Query: 61  LSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDL 120
           LSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDL
Sbjct: 61  LSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDL 120

Query: 121 YMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSTVVVDRATPKDDDFRPIGKMPQ 180
           YMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGS VVVDRATPKDDDFRPIGKMPQ
Sbjct: 121 YMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSNVVVDRATPKDDDFRPIGKMPQ 180

Query: 181 GGGGGG--YGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQEAS 240
           GGGGGG  YGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQEAS
Sbjct: 181 GGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQEAS 240

Query: 241 ADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAID 300
           ADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAID
Sbjct: 241 ADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAID 300

Query: 301 SATPLDDAGAGAGASGASGTFMMNSAADSFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGR 360
           SATPLDDAGAGAGASGASGTFMMNSAADSFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGR
Sbjct: 301 SATPLDDAGAGAGASGASGTFMMNSAADSFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGR 360

Query: 361 PSRADWRYRPY 369
           PSRADWRYRPY
Sbjct: 361 PSRADWRYRPY 371

[Close]

BLAST of MELO3C020894.jh1.t1 vs. NCBI nr
Match: XP_038877270.1 (RNA-binding protein Musashi homolog 1 [Benincasa hispida] >XP_038877271.1 RNA-binding protein Musashi homolog 1 [Benincasa hispida])

HSP 1 Score: 745 bits (1924), Expect = 1.59e-271
Identity = 364/369 (98.64%), Postives = 368/369 (99.73%), Query Frame = 0


Query: 1   MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60
           MDRKLVVLGIPWDVDTEGLR+YMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA
Sbjct: 1   MDRKLVVLGIPWDVDTEGLRDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60

Query: 61  LSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDL 120
           LSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQ+VTEAAFRSHFEKYGEITDL
Sbjct: 61  LSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDL 120

Query: 121 YMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSTVVVDRATPKDDDFRPIGKMPQ 180
           YMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSTVVVDRATPKDDDFRPIGKMPQ
Sbjct: 121 YMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSTVVVDRATPKDDDFRPIGKMPQ 180

Query: 181 GGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQEASAD 240
           GGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRE RGMGKKIFVGRLPQEASAD
Sbjct: 181 GGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRREIRGMGKKIFVGRLPQEASAD 240

Query: 241 DLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSA 300
           DLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSA
Sbjct: 241 DLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSA 300

Query: 301 TPLDDAGAGAGASGASGTFMMNSAADSFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPS 360
           TPLDDAGAGAGA+GASGTFMMNSAA+SFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPS
Sbjct: 301 TPLDDAGAGAGAAGASGTFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPS 360

Query: 361 RADWRYRPY 369
           RADWRYRPY
Sbjct: 361 RADWRYRPY 369

[Close]

BLAST of MELO3C020894.jh1.t1 vs. NCBI nr
Match: KAG6571306.1 (Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 719 bits (1856), Expect = 3.01e-260
Identity = 355/374 (94.92%), Postives = 362/374 (96.79%), Query Frame = 0


Query: 1   MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60
           MDRKLVVLGIPWDVDTE LREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA
Sbjct: 53  MDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 112

Query: 61  LSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDL 120
           LSSEHFLGNRMMEVK+ATPKEEMRAPPKRVTRIFVARISQ+VTEAAFRSHFEKYGEITDL
Sbjct: 113 LSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDL 172

Query: 121 YMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSTVVVDRATPKDDDFRPIGKMPQ 180
           YMPKDQGSK HRGIGFITFASSDSVE+LMA+THELGGSTVVVDRATPKDDDFRPIGKMPQ
Sbjct: 173 YMPKDQGSKIHRGIGFITFASSDSVESLMAETHELGGSTVVVDRATPKDDDFRPIGKMPQ 232

Query: 181 GGGGGG-----YGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQ 240
           GGGGGG     YGAYNAYISAATRYAALGAPTLYDHPG VYGRREFRGMGKKIFVGRLPQ
Sbjct: 233 GGGGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQ 292

Query: 241 EASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQV 300
           EASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQV
Sbjct: 293 EASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQV 352

Query: 301 AIDSATPLDDAGAGAGASGASGTFMMNSAADSFGGYVGPMRTYGRMYGSLDFDDWGYGIG 360
           AIDSATPLDD  AGAGA+GASG+FMMNSAA+SFGGY GPMRTYGRMYGSLDFDDWGYGIG
Sbjct: 353 AIDSATPLDDE-AGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGYGIG 412

Query: 361 GGRPSRADWRYRPY 369
           GGRPSR DWRYRPY
Sbjct: 413 GGRPSRGDWRYRPY 425

[Close]

BLAST of MELO3C020894.jh1.t1 vs. NCBI nr
Match: XP_022973186.1 (heterogeneous nuclear ribonucleoprotein D-like-B isoform X1 [Cucurbita maxima])

HSP 1 Score: 716 bits (1847), Expect = 9.35e-260
Identity = 352/372 (94.62%), Postives = 361/372 (97.04%), Query Frame = 0


Query: 1   MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60
           MDRKLVVLGIPWD+DTE LREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA
Sbjct: 1   MDRKLVVLGIPWDIDTEALREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60

Query: 61  LSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDL 120
           LSSEHFLGNRMMEVK+ATPKEEMRAPPKRVTRIFVARISQ+VTEAAFRSHFEKYGEITDL
Sbjct: 61  LSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDL 120

Query: 121 YMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSTVVVDRATPKDDDFRPIGKMPQ 180
           YMPKDQGSK HRGIGFITFASS+SVE+LMA+THELGGSTVVVDRATPKDDDFRPIGKMPQ
Sbjct: 121 YMPKDQGSKIHRGIGFITFASSESVESLMAETHELGGSTVVVDRATPKDDDFRPIGKMPQ 180

Query: 181 GGGGGG---YGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQEA 240
           GGGGGG   YGAYNAYISAATRYAALGAPTLYDHPG VYGRREFRGMGKKIFVGRLPQEA
Sbjct: 181 GGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEA 240

Query: 241 SADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAI 300
           SADDLRQYFGRFGRILDVYVPKDPKRS HRGFGFVTFAEDGVADRVSRRSHEICGQQVAI
Sbjct: 241 SADDLRQYFGRFGRILDVYVPKDPKRSSHRGFGFVTFAEDGVADRVSRRSHEICGQQVAI 300

Query: 301 DSATPLDDAGAGAGASGASGTFMMNSAADSFGGYVGPMRTYGRMYGSLDFDDWGYGIGGG 360
           DSATPLDD  AGAGA+GASG+FMMNSAA+SFGGY GPMRTYGRMYGSLDFDDWGYGIGGG
Sbjct: 301 DSATPLDDE-AGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGYGIGGG 360

Query: 361 RPSRADWRYRPY 369
           RPSR DWRYRPY
Sbjct: 361 RPSRGDWRYRPY 371

[Close]

BLAST of MELO3C020894.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.7e-29
Identity = 106/381 (27.82%), Postives = 158/381 (41.47%), Query Frame = 0


Query: 4   KLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63
           KL V GI W+ D + LRE+ + +GE+   IVM+++ TGR RGFG+V F+        L  
Sbjct: 7   KLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQE 66

Query: 64  EHFLGNRMMEVKVATPKEEMRAPPK----------------RVTRIFVARISQTVTEAAF 123
           +H +  R ++VK A  +EE +   +                +  +IFV  +  T+T+  F
Sbjct: 67  KHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEEF 126

Query: 124 RSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMADT-HELGGSTVVVDRAT 183
           R +FE YG +TD+ +  DQ +   RG GF++F S D+V++++  T H+L G  V V RA 
Sbjct: 127 RQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQVEVKRAL 186

Query: 184 PKDDDFRPIGKMPQGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRGMGK 243
           PKD +    G+   GGG GGY  Y    + ++    + +     H     G   +   G 
Sbjct: 187 PKDANPGGGGRSMGGGGSGGYQGYGG--NESSYDGRMDSNRFLQHQSVGNGLPSYGSSGY 246

Query: 244 KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRR 303
               G     A       Y G  G                 G+G       G        
Sbjct: 247 GAGYGNGSNGAGYGAYGGYTGSAGGY---------GAGATAGYGATNIPGAGYGSSTGVA 306

Query: 304 SHEICGQQVAIDSATPLDDAGA---GAGASGASGTFMMNSAADS----FGGYVGPMRTYG 361
                    +     P   +GA   G G  GA+      S   +    +GGY G    YG
Sbjct: 307 PRNSWDTPASSGYGNPGYGSGAAHSGYGVPGAAPPTQSPSGYSNQGYGYGGYSGSDSGYG 366

[Close]

BLAST of MELO3C020894.jh1.t1 vs. ExPASy Swiss-Prot
Match: O43347 (RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=9606 GN=MSI1 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 3.5e-27
Identity = 85/238 (35.71%), Postives = 119/238 (50.00%), Query Frame = 0


Query: 4   KLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALS- 63
           K+ + G+ W    EGLREY  +FGE+++C+VM++  T RSRGFG+VTF         L+ 
Sbjct: 21  KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80

Query: 64  SEHFLGNRMMEVKVATPKEEMRAPPKRVTR---IFVARISQTVTEAAFRSHFEKYGEITD 123
           S H L ++ ++ KVA P+   RA PK VTR   IFV  +S   T    + +FE++G++ D
Sbjct: 81  SRHELDSKTIDPKVAFPR---RAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 140

Query: 124 LYMPKDQGSKTHRGIGFITFASSDSVENLM-ADTHELGGSTVVVDRATPKDDDFRPIGK- 183
             +  D+ +  HRG GF+TF S D VE +     HE+    V   +A PK +   P G  
Sbjct: 141 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK-EVMSPTGSA 200

Query: 184 ------MPQGG-------GGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFR 223
                 MP G        G  GY  + A   A+  Y  L        PG  Y   EFR
Sbjct: 201 RGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASRSYTGLA-------PGYTYQFPEFR 247

[Close]

BLAST of MELO3C020894.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q61474 (RNA-binding protein Musashi homolog 1 OS=Mus musculus OX=10090 GN=Msi1 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 4.6e-27
Identity = 85/238 (35.71%), Postives = 119/238 (50.00%), Query Frame = 0


Query: 4   KLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALS- 63
           K+ + G+ W    EGLREY  +FGE+++C+VM++  T RSRGFG+VTF         L+ 
Sbjct: 21  KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80

Query: 64  SEHFLGNRMMEVKVATPKEEMRAPPKRVTR---IFVARISQTVTEAAFRSHFEKYGEITD 123
           S H L ++ ++ KVA P+   RA PK VTR   IFV  +S   T    + +FE++G++ D
Sbjct: 81  SRHELDSKTIDPKVAFPR---RAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDD 140

Query: 124 LYMPKDQGSKTHRGIGFITFASSDSVENLM-ADTHELGGSTVVVDRATPKDDDFRPIGK- 183
             +  D+ +  HRG GF+TF S D VE +     HE+    V   +A PK +   P G  
Sbjct: 141 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK-EVMSPTGSA 200

Query: 184 ------MPQGG-------GGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFR 223
                 MP G        G  GY  + A   A+  Y  L        PG  Y   EFR
Sbjct: 201 RGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASRSYTGLA-------PGYTYQFPEFR 247

[Close]

BLAST of MELO3C020894.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q8K3P4 (RNA-binding protein Musashi homolog 1 OS=Rattus norvegicus OX=10116 GN=Msi1 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 4.6e-27
Identity = 85/238 (35.71%), Postives = 119/238 (50.00%), Query Frame = 0


Query: 4   KLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALS- 63
           K+ + G+ W    EGLREY  +FGE+++C+VM++  T RSRGFG+VTF         L+ 
Sbjct: 21  KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80

Query: 64  SEHFLGNRMMEVKVATPKEEMRAPPKRVTR---IFVARISQTVTEAAFRSHFEKYGEITD 123
           S H L ++ ++ KVA P+   RA PK VTR   IFV  +S   T    + +FE++G++ D
Sbjct: 81  SRHELDSKTIDPKVAFPR---RAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDD 140

Query: 124 LYMPKDQGSKTHRGIGFITFASSDSVENLM-ADTHELGGSTVVVDRATPKDDDFRPIGK- 183
             +  D+ +  HRG GF+TF S D VE +     HE+    V   +A PK +   P G  
Sbjct: 141 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK-EVMSPTGSA 200

Query: 184 ------MPQGG-------GGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFR 223
                 MP G        G  GY  + A   A+  Y  L        PG  Y   EFR
Sbjct: 201 RGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASRSYTGLA-------PGYTYQFPEFR 247

[Close]

BLAST of MELO3C020894.jh1.t1 vs. ExPASy Swiss-Prot
Match: O94432 (Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC660.15 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 7.8e-27
Identity = 59/168 (35.12%), Postives = 98/168 (58.33%), Query Frame = 0


Query: 2   DRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNAL 61
           D K+ + G+ W+   + LR+Y  +FGE+ DC VM++ +TGRSRGFG++TF   +     +
Sbjct: 162 DGKMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVM 221

Query: 62  SSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDLY 121
           S EH L  ++++ K A P+EE     ++  ++FV  +    TE  FR+ F ++G + D  
Sbjct: 222 SKEHHLDGKIIDPKRAIPREEQ----EKTAKMFVGGVPGDCTEEEFRNFFNQFGRVLDAT 281

Query: 122 MPKDQGSKTHRGIGFITFASSDSVENLMADTH-ELGGSTVVVDRATPK 169
           +  D+ +   RG GF+T+ +  +VE  M+  +  + G  V V RATPK
Sbjct: 282 LMMDKDTGRPRGFGFVTYENESAVEATMSQPYITIHGKPVEVKRATPK 325

[Close]

BLAST of MELO3C020894.jh1.t1 vs. ExPASy TrEMBL
Match: A0A1S3C728 (RNA-binding protein Musashi homolog 1 OS=Cucumis melo OX=3656 GN=LOC103497417 PE=4 SV=1)

HSP 1 Score: 753 bits (1944), Expect = 6.87e-275
Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0


Query: 1   MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60
           MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA
Sbjct: 1   MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60

Query: 61  LSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDL 120
           LSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDL
Sbjct: 61  LSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDL 120

Query: 121 YMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSTVVVDRATPKDDDFRPIGKMPQ 180
           YMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSTVVVDRATPKDDDFRPIGKMPQ
Sbjct: 121 YMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSTVVVDRATPKDDDFRPIGKMPQ 180

Query: 181 GGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQEASAD 240
           GGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQEASAD
Sbjct: 181 GGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQEASAD 240

Query: 241 DLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSA 300
           DLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSA
Sbjct: 241 DLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSA 300

Query: 301 TPLDDAGAGAGASGASGTFMMNSAADSFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPS 360
           TPLDDAGAGAGASGASGTFMMNSAADSFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPS
Sbjct: 301 TPLDDAGAGAGASGASGTFMMNSAADSFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPS 360

Query: 361 RADWRYRPY 369
           RADWRYRPY
Sbjct: 361 RADWRYRPY 369

[Close]

BLAST of MELO3C020894.jh1.t1 vs. ExPASy TrEMBL
Match: A0A0A0LMN9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285910 PE=4 SV=1)

HSP 1 Score: 746 bits (1926), Expect = 4.11e-272
Identity = 368/371 (99.19%), Postives = 368/371 (99.19%), Query Frame = 0


Query: 1   MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60
           MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA
Sbjct: 1   MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60

Query: 61  LSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDL 120
           LSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDL
Sbjct: 61  LSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDL 120

Query: 121 YMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSTVVVDRATPKDDDFRPIGKMPQ 180
           YMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGS VVVDRATPKDDDFRPIGKMPQ
Sbjct: 121 YMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSNVVVDRATPKDDDFRPIGKMPQ 180

Query: 181 GGGGGG--YGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQEAS 240
           GGGGGG  YGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQEAS
Sbjct: 181 GGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQEAS 240

Query: 241 ADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAID 300
           ADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAID
Sbjct: 241 ADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAID 300

Query: 301 SATPLDDAGAGAGASGASGTFMMNSAADSFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGR 360
           SATPLDDAGAGAGASGASGTFMMNSAADSFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGR
Sbjct: 301 SATPLDDAGAGAGASGASGTFMMNSAADSFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGR 360

Query: 361 PSRADWRYRPY 369
           PSRADWRYRPY
Sbjct: 361 PSRADWRYRPY 371

[Close]

BLAST of MELO3C020894.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6J1I7Z8 (heterogeneous nuclear ribonucleoprotein D-like-B isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471691 PE=4 SV=1)

HSP 1 Score: 716 bits (1847), Expect = 4.53e-260
Identity = 352/372 (94.62%), Postives = 361/372 (97.04%), Query Frame = 0


Query: 1   MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60
           MDRKLVVLGIPWD+DTE LREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA
Sbjct: 1   MDRKLVVLGIPWDIDTEALREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60

Query: 61  LSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDL 120
           LSSEHFLGNRMMEVK+ATPKEEMRAPPKRVTRIFVARISQ+VTEAAFRSHFEKYGEITDL
Sbjct: 61  LSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDL 120

Query: 121 YMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSTVVVDRATPKDDDFRPIGKMPQ 180
           YMPKDQGSK HRGIGFITFASS+SVE+LMA+THELGGSTVVVDRATPKDDDFRPIGKMPQ
Sbjct: 121 YMPKDQGSKIHRGIGFITFASSESVESLMAETHELGGSTVVVDRATPKDDDFRPIGKMPQ 180

Query: 181 GGGGGG---YGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQEA 240
           GGGGGG   YGAYNAYISAATRYAALGAPTLYDHPG VYGRREFRGMGKKIFVGRLPQEA
Sbjct: 181 GGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEA 240

Query: 241 SADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAI 300
           SADDLRQYFGRFGRILDVYVPKDPKRS HRGFGFVTFAEDGVADRVSRRSHEICGQQVAI
Sbjct: 241 SADDLRQYFGRFGRILDVYVPKDPKRSSHRGFGFVTFAEDGVADRVSRRSHEICGQQVAI 300

Query: 301 DSATPLDDAGAGAGASGASGTFMMNSAADSFGGYVGPMRTYGRMYGSLDFDDWGYGIGGG 360
           DSATPLDD  AGAGA+GASG+FMMNSAA+SFGGY GPMRTYGRMYGSLDFDDWGYGIGGG
Sbjct: 301 DSATPLDDE-AGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGYGIGGG 360

Query: 361 RPSRADWRYRPY 369
           RPSR DWRYRPY
Sbjct: 361 RPSRGDWRYRPY 371

[Close]

BLAST of MELO3C020894.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6J1D811 (RNA-binding protein Musashi homolog 1 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111017885 PE=4 SV=1)

HSP 1 Score: 713 bits (1840), Expect = 4.90e-259
Identity = 352/370 (95.14%), Postives = 360/370 (97.30%), Query Frame = 0


Query: 1   MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60
           MDRKLVVLGIPWD+DTEGL++YMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA
Sbjct: 1   MDRKLVVLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60

Query: 61  LSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDL 120
           LSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQ+VTEAAFRSHFEKYGEITDL
Sbjct: 61  LSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDL 120

Query: 121 YMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSTVVVDRATPKDDDFRPIGKMPQ 180
           YMPKDQGSK HRGIGFITFASSDSVENLMA+THELGGSTVVVDRATPKDDDFRPIGKM Q
Sbjct: 121 YMPKDQGSKMHRGIGFITFASSDSVENLMAETHELGGSTVVVDRATPKDDDFRPIGKMAQ 180

Query: 181 GGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQEASAD 240
           G  GGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRE RGMGKKIFVGRLPQEAS+D
Sbjct: 181 GSSGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEASSD 240

Query: 241 DLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSA 300
           DLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSA
Sbjct: 241 DLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSA 300

Query: 301 TPLDDAGAGAGASGASGTFMMNSAADSFGGYVG-PMRTYGRMYGSLDFDDWGYGIGGGRP 360
           TPLDDAGA  GA GASG+FMMNSAA+SFGGY G PMRTYGRMYGSLDFDDWGYGIGGGRP
Sbjct: 301 TPLDDAGAPTGA-GASGSFMMNSAAESFGGYGGGPMRTYGRMYGSLDFDDWGYGIGGGRP 360

Query: 361 SRADWRYRPY 369
           SRADWRYRPY
Sbjct: 361 SRADWRYRPY 369

[Close]

BLAST of MELO3C020894.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6J1EWL0 (heterogeneous nuclear ribonucleoprotein D0-like OS=Cucurbita moschata OX=3662 GN=LOC111438656 PE=4 SV=1)

HSP 1 Score: 716 bits (1849), Expect = 1.01e-258
Identity = 354/376 (94.15%), Postives = 362/376 (96.28%), Query Frame = 0


Query: 1   MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60
           MDRKLVVLGIPWDVDTE LREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA
Sbjct: 99  MDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 158

Query: 61  LSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDL 120
           LSSEHFLGNRMMEVK+ATPKEEMRAPPKRVTRIFVARISQ+VTEAAFRSHFEKYGEITDL
Sbjct: 159 LSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDL 218

Query: 121 YMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSTVVVDRATPKDDDFRPIGKMPQ 180
           YMPKDQGSK HRGIGFITFASSDSVE+LMA+THELGGSTVVVDRATPKDDDFRPIGKMPQ
Sbjct: 219 YMPKDQGSKIHRGIGFITFASSDSVESLMAETHELGGSTVVVDRATPKDDDFRPIGKMPQ 278

Query: 181 GGGGGG-------YGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRGMGKKIFVGRL 240
           GGGGGG       YGAY+AYISAATRYAALGAPTLYDHPG VYGRREFRGMGKKIFVGRL
Sbjct: 279 GGGGGGGGGGGGGYGAYSAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRL 338

Query: 241 PQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQ 300
           PQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQ
Sbjct: 339 PQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQ 398

Query: 301 QVAIDSATPLDDAGAGAGASGASGTFMMNSAADSFGGYVGPMRTYGRMYGSLDFDDWGYG 360
           QVAIDSATPLDD  AGAGA+GASG+FMMNSAA+SFGGY GPMRTYGRMYGSLDFDDWGYG
Sbjct: 399 QVAIDSATPLDDE-AGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGYG 458

Query: 361 IGGGRPSRADWRYRPY 369
           IGGGRPSR DWRYRPY
Sbjct: 459 IGGGRPSRGDWRYRPY 473

[Close]

BLAST of MELO3C020894.jh1.t1 vs. TAIR 10
Match: AT4G36960.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 561.6 bits (1446), Expect = 4.6e-160
Identity = 279/383 (72.85%), Postives = 320/383 (83.55%), Query Frame = 0


Query: 1   MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60
           M+RKLVVLGIPWD+D++GL++YMSKFG+LEDCIVMK+RSTGRSRGFGYVTFA+ EDAKNA
Sbjct: 1   MERKLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNA 60

Query: 61  LSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDL 120
           L  EHFLGNR++EVKVATPKEEMR P K+VTRIFVARI  +V+E+ FRSHFE+YGEITDL
Sbjct: 61  LKGEHFLGNRILEVKVATPKEEMRQPAKKVTRIFVARIPSSVSESDFRSHFERYGEITDL 120

Query: 121 YMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSTVVVDRATPKDDDF----RPIG 180
           YMPKD  SK HRGIGFITF+S+DSVE+LM DTH+LGG+TV VDRATPK+DD      P+ 
Sbjct: 121 YMPKDYNSKQHRGIGFITFSSADSVEDLMEDTHDLGGTTVAVDRATPKEDDHPPRPPPVA 180

Query: 181 KMPQ------GGGG--GGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRE--FRGMGK 240
           +M +      GG G  GGYGAY+AYISAATRYAALGAPTLYD+P + YGR E   RG+G 
Sbjct: 181 RMSRPPVAIAGGFGAPGGYGAYDAYISAATRYAALGAPTLYDNPATFYGRGEPTTRGIGN 240

Query: 241 KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRR 300
           KIFVGRLPQEAS DDLR YFGRFG I D Y+PKDPKRSGHRGFGFVTFAE+GVADRV+RR
Sbjct: 241 KIFVGRLPQEASVDDLRDYFGRFGHIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARR 300

Query: 301 SHEICGQQVAIDSATPLDDAGAGAGASGASGTFMMNSAADSFGGYVGPMRTYGRMYGSLD 360
           SHEICGQ+VAIDSATPLD+AG  AGAS    + + +S  + FGGY GPMR +GRMYG + 
Sbjct: 301 SHEICGQEVAIDSATPLDEAGPSAGAS----SMLSSSRPEYFGGYGGPMRAFGRMYGGMS 360

Query: 361 FDDWGYGIGGGRPSRADWRYRPY 370
            DDWGYG+   RPSR D RYRPY
Sbjct: 361 LDDWGYGMPNARPSRPDRRYRPY 379

[Close]

BLAST of MELO3C020894.jh1.t1 vs. TAIR 10
Match: AT4G36960.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 561.6 bits (1446), Expect = 4.6e-160
Identity = 279/383 (72.85%), Postives = 320/383 (83.55%), Query Frame = 0


Query: 1   MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60
           M+RKLVVLGIPWD+D++GL++YMSKFG+LEDCIVMK+RSTGRSRGFGYVTFA+ EDAKNA
Sbjct: 1   MERKLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNA 60

Query: 61  LSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDL 120
           L  EHFLGNR++EVKVATPKEEMR P K+VTRIFVARI  +V+E+ FRSHFE+YGEITDL
Sbjct: 61  LKGEHFLGNRILEVKVATPKEEMRQPAKKVTRIFVARIPSSVSESDFRSHFERYGEITDL 120

Query: 121 YMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSTVVVDRATPKDDDF----RPIG 180
           YMPKD  SK HRGIGFITF+S+DSVE+LM DTH+LGG+TV VDRATPK+DD      P+ 
Sbjct: 121 YMPKDYNSKQHRGIGFITFSSADSVEDLMEDTHDLGGTTVAVDRATPKEDDHPPRPPPVA 180

Query: 181 KMPQ------GGGG--GGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRE--FRGMGK 240
           +M +      GG G  GGYGAY+AYISAATRYAALGAPTLYD+P + YGR E   RG+G 
Sbjct: 181 RMSRPPVAIAGGFGAPGGYGAYDAYISAATRYAALGAPTLYDNPATFYGRGEPTTRGIGN 240

Query: 241 KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRR 300
           KIFVGRLPQEAS DDLR YFGRFG I D Y+PKDPKRSGHRGFGFVTFAE+GVADRV+RR
Sbjct: 241 KIFVGRLPQEASVDDLRDYFGRFGHIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARR 300

Query: 301 SHEICGQQVAIDSATPLDDAGAGAGASGASGTFMMNSAADSFGGYVGPMRTYGRMYGSLD 360
           SHEICGQ+VAIDSATPLD+AG  AGAS    + + +S  + FGGY GPMR +GRMYG + 
Sbjct: 301 SHEICGQEVAIDSATPLDEAGPSAGAS----SMLSSSRPEYFGGYGGPMRAFGRMYGGMS 360

Query: 361 FDDWGYGIGGGRPSRADWRYRPY 370
            DDWGYG+   RPSR D RYRPY
Sbjct: 361 LDDWGYGMPNARPSRPDRRYRPY 379

[Close]

BLAST of MELO3C020894.jh1.t1 vs. TAIR 10
Match: AT4G26650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 138.7 bits (348), Expect = 9.7e-33
Identity = 82/246 (33.33%), Postives = 130/246 (52.85%), Query Frame = 0


Query: 4   KLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63
           KL + GI WD D E L+EY  K+G+L + ++M++R+TGR+RGFG++ FA    A+  +  
Sbjct: 16  KLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIMD 75

Query: 64  EHFLGNRMMEVKVATPKEEMR-----APP--------------KRVTRIFVARISQTVTE 123
           +H +  R +E K A P+++ +     A P               R  +IFV  +  ++TE
Sbjct: 76  KHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPSSITE 135

Query: 124 AAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMADT-HELGGSTVVVD 183
           A F+++F+++G I D+ +  D  ++  RG GFITF S +SV+ ++  T HEL G  V V 
Sbjct: 136 AEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKMVEVK 195

Query: 184 RATPKDDDFRPIGKMPQGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRG 230
           RA PK+       + P  G G  YG      SA + + +       ++ GS  GR    G
Sbjct: 196 RAVPKELSSTTPNRSPLIGYGNNYGVVPNRSSANSYFNSFPPGYNNNNLGSA-GRFSPIG 255

[Close]

BLAST of MELO3C020894.jh1.t1 vs. TAIR 10
Match: AT4G26650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 138.7 bits (348), Expect = 9.7e-33
Identity = 82/246 (33.33%), Postives = 130/246 (52.85%), Query Frame = 0


Query: 4   KLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63
           KL + GI WD D E L+EY  K+G+L + ++M++R+TGR+RGFG++ FA    A+  +  
Sbjct: 13  KLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIMD 72

Query: 64  EHFLGNRMMEVKVATPKEEMR-----APP--------------KRVTRIFVARISQTVTE 123
           +H +  R +E K A P+++ +     A P               R  +IFV  +  ++TE
Sbjct: 73  KHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPSSITE 132

Query: 124 AAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMADT-HELGGSTVVVD 183
           A F+++F+++G I D+ +  D  ++  RG GFITF S +SV+ ++  T HEL G  V V 
Sbjct: 133 AEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKMVEVK 192

Query: 184 RATPKDDDFRPIGKMPQGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRG 230
           RA PK+       + P  G G  YG      SA + + +       ++ GS  GR    G
Sbjct: 193 RAVPKELSSTTPNRSPLIGYGNNYGVVPNRSSANSYFNSFPPGYNNNNLGSA-GRFSPIG 252

[Close]

BLAST of MELO3C020894.jh1.t1 vs. TAIR 10
Match: AT3G07810.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 136.7 bits (343), Expect = 3.7e-32
Identity = 72/195 (36.92%), Postives = 114/195 (58.46%), Query Frame = 0


Query: 4   KLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63
           KL + GI WD + E L+EY S FGE+ + +++K+R+TGR+RGFG+V FA    A+  ++ 
Sbjct: 7   KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE 66

Query: 64  EHFLGNRMMEVKVATPKEEMR--------------APPKRVTRIFVARISQTVTEAAFRS 123
           +H +  R++E K A P+++                  P R  +IFV  +  +VTE+ F++
Sbjct: 67  KHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESDFKT 126

Query: 124 HFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMADT-HELGGSTVVVDRATPK 183
           +FE++G  TD+ +  D  ++  RG GFIT+ S ++VE ++  T HEL G  V V RA PK
Sbjct: 127 YFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRAVPK 186

The following BLAST results are available for this feature:

BLAST of MELO3C020894.jh1.t1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457826.1	1.42e-274	100.00	PREDICTED: RNA-binding protein Musashi homolog 1 [Cucumis melo] >XP_008457827.1 ...	[more]
XP_011649346.1	8.48e-272	99.19	RNA-binding protein Musashi homolog 1 isoform X2 [Cucumis sativus] >XP_031737421...	[more]
XP_038877270.1	1.59e-271	98.64	RNA-binding protein Musashi homolog 1 [Benincasa hispida] >XP_038877271.1 RNA-bi...	[more]
KAG6571306.1	3.01e-260	94.92	Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp...	[more]
XP_022973186.1	9.35e-260	94.62	heterogeneous nuclear ribonucleoprotein D-like-B isoform X1 [Cucurbita maxima]	[more]

BLAST of MELO3C020894.jh1.t1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W034	1.7e-29	27.82	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP...	[more]
O43347	3.5e-27	35.71	RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=9606 GN=MSI1 PE=1 SV=1	[more]
Q61474	4.6e-27	35.71	RNA-binding protein Musashi homolog 1 OS=Mus musculus OX=10090 GN=Msi1 PE=1 SV=1	[more]
Q8K3P4	4.6e-27	35.71	RNA-binding protein Musashi homolog 1 OS=Rattus norvegicus OX=10116 GN=Msi1 PE=1...	[more]
O94432	7.8e-27	35.12	Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain...	[more]

BLAST of MELO3C020894.jh1.t1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C728	6.87e-275	100.00	RNA-binding protein Musashi homolog 1 OS=Cucumis melo OX=3656 GN=LOC103497417 PE...	[more]
A0A0A0LMN9	4.11e-272	99.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285910 PE=4 SV=1	[more]
A0A6J1I7Z8	4.53e-260	94.62	heterogeneous nuclear ribonucleoprotein D-like-B isoform X1 OS=Cucurbita maxima ...	[more]
A0A6J1D811	4.90e-259	95.14	RNA-binding protein Musashi homolog 1 isoform X2 OS=Momordica charantia OX=3673 ...	[more]
A0A6J1EWL0	1.01e-258	94.15	heterogeneous nuclear ribonucleoprotein D0-like OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of MELO3C020894.jh1.t1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36960.1	4.6e-160	72.85	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G36960.2	4.6e-160	72.85	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.1	9.7e-33	33.33	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.2	9.7e-33	33.33	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.1	3.7e-32	36.92	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 92..163 e-value: 5.8E-17 score: 72.4 coord: 227..298 e-value: 4.8E-16 score: 69.3 coord: 4..75 e-value: 1.5E-21 score: 87.6
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 228..282 e-value: 8.7E-13 score: 47.9 coord: 93..159 e-value: 3.0E-11 score: 43.0 coord: 5..63 e-value: 4.2E-14 score: 52.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 226..302 score: 16.090803
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 91..167 score: 14.811647
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 3..79 score: 16.346634
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 83..197 e-value: 4.3E-22 score: 80.7
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 224..306 e-value: 1.5E-20 score: 75.1
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 2..82 e-value: 2.9E-24 score: 87.1
None	No IPR available	PANTHER	PTHR48027:SF15	OS01G0945800 PROTEIN	coord: 1..369
None	No IPR available	PANTHER	PTHR48027	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED	coord: 1..369
None	No IPR available	CDD	cd12322	RRM2_TDP43	coord: 226..301 e-value: 1.5008E-29 score: 106.968
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 87..189
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 226..318
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 3..88

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C020894.jh1	MELO3C020894.jh1	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C020894.jh1.t1.exon	MELO3C020894.jh1.t1.exon	exon
MELO3C020894.jh1.t1.exon	MELO3C020894.jh1.t1.exon_2	exon
MELO3C020894.jh1.t1.exon	MELO3C020894.jh1.t1.exon_3	exon
MELO3C020894.jh1.t1.exon	MELO3C020894.jh1.t1.exon_4	exon
MELO3C020894.jh1.t1.exon	MELO3C020894.jh1.t1.exon_5	exon
MELO3C020894.jh1.t1.exon	MELO3C020894.jh1.t1.exon_6	exon
MELO3C020894.jh1.t1.exon	MELO3C020894.jh1.t1.exon_7	exon
MELO3C020894.jh1.t1.exon	MELO3C020894.jh1.t1.exon_8	exon
MELO3C020894.jh1.t1.exon	MELO3C020894.jh1.t1.exon_9	exon
MELO3C020894.jh1.t1.exon	MELO3C020894.jh1.t1.exon_10	exon
MELO3C020894.jh1.t1.exon	MELO3C020894.jh1.t1.exon_11	exon
MELO3C020894.jh1.t1.exon	MELO3C020894.jh1.t1.exon_12	exon
MELO3C020894.jh1.t1.exon	MELO3C020894.jh1.t1.exon_13	exon
MELO3C020894.jh1.t1.exon	MELO3C020894.jh1.t1.exon_14	exon

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C020894.jh1.t1.stop_codon	MELO3C020894.jh1.t1.stop_codon	stop_codon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C020894.jh1.t1.cds	MELO3C020894.jh1.t1.cds	CDS
MELO3C020894.jh1.t1.cds	MELO3C020894.jh1.t1.cds_2	CDS
MELO3C020894.jh1.t1.cds	MELO3C020894.jh1.t1.cds_3	CDS
MELO3C020894.jh1.t1.cds	MELO3C020894.jh1.t1.cds_4	CDS
MELO3C020894.jh1.t1.cds	MELO3C020894.jh1.t1.cds_5	CDS
MELO3C020894.jh1.t1.cds	MELO3C020894.jh1.t1.cds_6	CDS
MELO3C020894.jh1.t1.cds	MELO3C020894.jh1.t1.cds_7	CDS
MELO3C020894.jh1.t1.cds	MELO3C020894.jh1.t1.cds_8	CDS
MELO3C020894.jh1.t1.cds	MELO3C020894.jh1.t1.cds_9	CDS
MELO3C020894.jh1.t1.cds	MELO3C020894.jh1.t1.cds_10	CDS
MELO3C020894.jh1.t1.cds	MELO3C020894.jh1.t1.cds_11	CDS
MELO3C020894.jh1.t1.cds	MELO3C020894.jh1.t1.cds_12	CDS
MELO3C020894.jh1.t1.cds	MELO3C020894.jh1.t1.cds_13	CDS

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C020894.jh1.t1.start_codon	MELO3C020894.jh1.t1.start_codon	start_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C020894.jh1.t1	MELO3C020894.jh1.t1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding