MELO3C019956.jh1.t1 (mRNA) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonstart_codonCDSpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.TCCCGCGAGGGAAGCTCTGATCAAATCAAACGAGAGGCTATTCCTCTCTTCTCCGCAAAAAAATCATATTTCATTTTCACTTTCAATTCCATTTTTCTTCCGTTTATCCCTTCCATTTCTGTTCTCATTTCACAATTTGTGTCACGTTCTGTTGTTGTATTCATTTTGCGCCGAAAAATGGAAGCGGCCATGGGATTGATGAGGAGAATGCCTCCAAAGCACTCCGAAACCGCTCTCTCCGCTCTTCTTACTCTCTTACCTCACCATTCTTCCGATCTACTTTCCCAGGTTGACCAGCCTCTTCAGGTGATGCTGTTTCTTCTGTTTCCTTTGTTGTTATTTTGAAATTTCTTTGAGATTTTGTTGGGTTTTGTATATTATCAGCGTTTTCTTCTTTTCTGTTCTTTCTCACATTTTATTACTATTTATTCGGGTTTTAGGGTTCTAATTTGCTTCTTTTTTTTAAAAAAAAAAAAAAGAAAAATCTATCGGCTTTATCGTGTTTGGATTCAACCCAAATTTCCCTAACTACTATATTTGTAATTCTGGGTGCTGGTTTTAATTAGCTTGGGGTTTGAAGGATGGATGTTTTTGCGGTGGCATGGTTGAATCATTAAGAGTGGTTCTTTAATTTTCTTTTGAGTTATCTTTGACTTCATTTACAAGGTTTTGATTGTTTAAATAATGAGGTAATGGGGGTTCGTCACTTATTGTTACTCTGGCTATCTCCTGGGTTATTTTATTACTACTATGCTGATTGCTAATGACCTTTTTTCCTAATCGCCTTTGGTGTACGAAAACTTACATTTCTTCAATCCTCTCCGCATTGACAGTGCTTCAACTTGTTAAAATAAACTTAAGTTCCCTAGTTTTCTGAATGAGAAATCACAACATTTACAGGTTCTATGTGATGTGGACAATGGGAAGGAATTTATTTTGTGCGAATACAACAGAGATGCAGATTCATATAGGTATGTACGTAGATCCATTTTGCAGGGTTTTGTGCACCTAGCTTCAGTAATATGCTTATCAATGGTTTTAGCAAGGTTTCCTCAGTTAATAGATATTTTGATATTTACCTCAATGTTTGAGGCTAAAATGCCTACTGTTCCAGTAATGAGTAGCACTGCGAAATGTATTCCTAACTTCAAGACAAGTTCTTTGCATGTTTCAGAATTCAATGTGTGTTTGTACTTATCTACTAGATAGGTACAGCCAGTGGTCATGCATTATGTAAATCCGATTTTTTTTGTTATATGTATGAGTCCGTTGTATGCAAGTAATTATTACATGATTTATGAAGGGCTTTCAATGTAAAAAAAAAATCTCTGAGTCTTGGACGGCTGTTTACCTTTTACCACCGGTTGTAAGCTAACAAACATAACATTAACAGCCTTTCAGACTTTCAGTACTGATTCTGTTGACAAATATCTAACAGAAACGAATATAAGAATATTAAGTTTAGGAATATTAAGGTTTTTTTTCTCCTATAAAAAAATATGACGGCATGATGTAAGTTTTGGTTGATTAAAAAGCAGCTTAATGACCAGTATATTTTTGGTTTCTAACAGTATCTTTTGTCAATGTTTTATTTATGCTGTATTCTTTTCTTGCCATATAGATCACCGTGGTCGAACAAATATCATCCACCATTGGAAGATGGAGCTATGCCATCTATAGAGTTGCGGAAACTTGAAATTGAAGCAAATGAAGTATTCACAATCTATCGTGACCAGTGAGGTCCTTTGCTTGCTTCCTTTTTGACCCTTGTGCAATAGAATAATCGGTTTAGATACTATTTGCAGCCAGTGTATACTTCTAGATTCAAGAAGCATTTTCTAGGGGAATTATTTATTTCTAAGACAAACATAGAATCTACCCAGTTCCCGTCCAAACCCAAATATAGAACCTGCCCCATTCAATTAAACAATCAATGTCCTTGTATGATTATGTATTTCTTAAGACAGCTGCTTTAACAAATGATTGGTCAGGTATTATGAAGGTGGCATTTCATCTGTGTATATGTGGGAAGATGATGAGGATAGTTTTGTCGGCTGTTTTTTGATAAAGAAAGGTAAGACTAACCAATACATGAATTGTGAGCATTAATCATAATGAATGTTTGATCATGTGATGCTTTTTGATGATAAAGATGGCTCAAAGACTGGTCATGGTCGAAGAGGATTTCTACAGGAGGGAGCATGGGATGCCATTCATGTTATTGAGGTATCTTTTTTTCCATCGATAAAAGATCATCTACTAGATTTTGGATTGTTTATGTACTCTGTCCATCTCTTGACCAAATTCAGGTGAGGCTAGAAGATGAGGGTACAGCTAGCTATTGTCTAACAAGTACAGTCATGCTATCGTTGACGACAGATAACAATGCAGCTGGGACTTTTAGTTTGTCTGGTTCAATTAGAAGACAGGTATTGTAGAATGAATTTTGTGATTTGACTATTTAGGTTTAGTTAGTAACGATCACGAGTTGATCTAGTGGTCAATTAGTAAAAGCCATGAGTATAATAAAGAACTTAGAAGGAGATTCAACCCATAGTGGATAGACTACCTACCTAGGATTTAATATCTTACAAATTTTGTTAGCTCCATAATGTATGTTGTAAGGGCAAGTGGGTTGTCTTGTGAGATTAGTTGAGGTCCATGCAAGCTAACCATACACTCAAAGATGTATGTGTGTGTGGGTGTCTCCCTCTCTCTCTCTATATATATATTAAAAATTCAAATAGTTGATTTTGGAGGTCCTCAAGGGCCATGGTAAGAGCTTCGAGACTTTTTGGTCCTACTGGCTTAGAGGTCCCAAGTTGCTTAATTCCAAAAACTTTTGATGTCTCCTAGGTCTTGGGATGGGCATGAGTCCCTCCTGGTATAGGGCAGGCGCCAACTCCATTATTGAAATGAAAATATATTTGACTTTAGAGGAAGAATTACCAGAAAACGGGGTGGGAGCCACACTCCTTCCAGAAAAATTTTGCAAAGCCTAAAAGCTTGATTGTCATCTACTTTTGTTCCATTTGTGCGATTGACTGTTTGAATGAGTGGTTTAGGCAGCACGGAACAAGAACATTAAGATAATAGTGGCCATCTAGTATCTTGGATTCTTTTCATAATGCAAATAAAATGGAAGCCTATACCGAACCTTTACATGTTCTTTTTTCTGTTGTATGTTTTGATTGATTAATCTTCTGCCTCTATAATGAGTCAATAACAAATATATGCCTGTGAATAGCAGTCATCTGTTGCTCTACCATGTTAGTTCGAGGGTTTTTATTTCATCCATGCTTCGCACCTCTAATACTATAATAATACTGTAACTTAGTGTGGGTTTGTTTTATTTGCCTTTATTTTTCAATTATGTTCTTTCTATATCCTTTCATCTAAAAAGAAAGAGCTATAATAATTCTGGTTCCACCGCATTTGTAGATGAAAATGAAGCTCTCAGTTGCAGAAGGCCATCTTTGTAACATGGGTCGAATGATCGAAGAAATGGAAAGTAAGCTGAGGAATTCACTCGATCAGGTAATTTTGTCTCCCAATACTTTGTCTGTCTCAGTTTGACATCTCTCGAACCCTATGCCCTTTTCAAGGCACAAGTTTTGACCATAGGAATGATTAATGAAACTATGCGATGTGGTACCCTTAATAGGTATATTTTGGGAAAACAAAAGAGATGGTTTGCACCTTGCGGCCACCCTCAGAAGTGTTGCATATGAAACTACCCGACAAGTGACCACTGATTATACAGAACCTGAATTGGCACAGCGAACCGGTGGACAGTTGTAAGTCAATTTTCTACTTGTGTAACTGTTTGTGATTTGAATTTGATTGTGTTTTCCGATCTCTACTTATGTCAAAAAAAAAAAAAGAAAAAGAAAAAAAAGAAAAGAAAAGAAAGGAAGCTGTTTAGTTGTGAGTGTAGCGATTCTAGGGATTTGACAGTTTATTAGTTGTTGCAAATTTGAGACGGAGTTTTGAATTGAAAATTGCATTTGATTCTTCTGTGTGTTTTACTTGGATAAATGTAGAGATAGAAATTGAAACTGAATTTAACTTGGTTATCAA TCCCGCGAGGGAAGCTCTGATCAAATCAAACGAGAGGCTATTCCTCTCTTCTCCGCAAAAAAATCATATTTCATTTTCACTTTCAATTCCATTTTTCTTCCGTTTATCCCTTCCATTTCTGTTCTCATTTCACAATTTGTGTCACGTTCTGTTGTTGTATTCATTTTGCGCCGAAAAATGGAAGCGGCCATGGGATTGATGAGGAGAATGCCTCCAAAGCACTCCGAAACCGCTCTCTCCGCTCTTCTTACTCTCTTACCTCACCATTCTTCCGATCTACTTTCCCAGGTTGACCAGCCTCTTCAGGTTCTATGTGATGTGGACAATGGGAAGGAATTTATTTTGTGCGAATACAACAGAGATGCAGATTCATATAGATCACCGTGGTCGAACAAATATCATCCACCATTGGAAGATGGAGCTATGCCATCTATAGAGTTGCGGAAACTTGAAATTGAAGCAAATGAAGTATTCACAATCTATCGTGACCAGTATTATGAAGGTGGCATTTCATCTGTGTATATGTGGGAAGATGATGAGGATAGTTTTGTCGGCTGTTTTTTGATAAAGAAAGATGGCTCAAAGACTGGTCATGGTCGAAGAGGATTTCTACAGGAGGGAGCATGGGATGCCATTCATGTTATTGAGGTGAGGCTAGAAGATGAGGGTACAGCTAGCTATTGTCTAACAAGTACAGTCATGCTATCGTTGACGACAGATAACAATGCAGCTGGGACTTTTAGTTTGTCTGGTTCAATTAGAAGACAGATGAAAATGAAGCTCTCAGTTGCAGAAGGCCATCTTTGTAACATGGGTCGAATGATCGAAGAAATGGAAAGTAAGCTGAGGAATTCACTCGATCAGGTATATTTTGGGAAAACAAAAGAGATGGTTTGCACCTTGCGGCCACCCTCAGAAGTGTTGCATATGAAACTACCCGACAAGTGACCACTGATTATACAGAACCTGAATTGGCACAGCGAACCGGTGGACAGTTGTAAGTCAATTTTCTACTTGTGTAACTGTTTGTGATTTGAATTTGATTGTGTTTTCCGATCTCTACTTATGTCAAAAAAAAAAAAAGAAAAAGAAAAAAAAGAAAAGAAAAGAAAGGAAGCTGTTTAGTTGTGAGTGTAGCGATTCTAGGGATTTGACAGTTTATTAGTTGTTGCAAATTTGAGACGGAGTTTTGAATTGAAAATTGCATTTGATTCTTCTGTGTGTTTTACTTGGATAAATGTAGAGATAGAAATTGAAACTGAATTTAACTTGGTTATCAA ATGGAAGCGGCCATGGGATTGATGAGGAGAATGCCTCCAAAGCACTCCGAAACCGCTCTCTCCGCTCTTCTTACTCTCTTACCTCACCATTCTTCCGATCTACTTTCCCAGGTTGACCAGCCTCTTCAGGTTCTATGTGATGTGGACAATGGGAAGGAATTTATTTTGTGCGAATACAACAGAGATGCAGATTCATATAGATCACCGTGGTCGAACAAATATCATCCACCATTGGAAGATGGAGCTATGCCATCTATAGAGTTGCGGAAACTTGAAATTGAAGCAAATGAAGTATTCACAATCTATCGTGACCAGTATTATGAAGGTGGCATTTCATCTGTGTATATGTGGGAAGATGATGAGGATAGTTTTGTCGGCTGTTTTTTGATAAAGAAAGATGGCTCAAAGACTGGTCATGGTCGAAGAGGATTTCTACAGGAGGGAGCATGGGATGCCATTCATGTTATTGAGGTGAGGCTAGAAGATGAGGGTACAGCTAGCTATTGTCTAACAAGTACAGTCATGCTATCGTTGACGACAGATAACAATGCAGCTGGGACTTTTAGTTTGTCTGGTTCAATTAGAAGACAGATGAAAATGAAGCTCTCAGTTGCAGAAGGCCATCTTTGTAACATGGGTCGAATGATCGAAGAAATGGAAAGTAAGCTGAGGAATTCACTCGATCAGGTATATTTTGGGAAAACAAAAGAGATGGTTTGCACCTTGCGGCCACCCTCAGAAGTGTTGCATATGAAACTACCCGACAAGTGA MEAAMGLMRRMPPKHSETALSALLTLLPHHSSDLLSQVDQPLQVLCDVDNGKEFILCEYNRDADSYRSPWSNKYHPPLEDGAMPSIELRKLEIEANEVFTIYRDQYYEGGISSVYMWEDDEDSFVGCFLIKKDGSKTGHGRRGFLQEGAWDAIHVIEVRLEDEGTASYCLTSTVMLSLTTDNNAAGTFSLSGSIRRQMKMKLSVAEGHLCNMGRMIEEMESKLRNSLDQVYFGKTKEMVCTLRPPSEVLHMKLPDK Homology
BLAST of MELO3C019956.jh1.t1 vs. NCBI nr
Match: XP_008456700.1 (PREDICTED: probable F-actin-capping protein subunit beta [Cucumis melo]) HSP 1 Score: 522 bits (1345), Expect = 4.46e-187 Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0
BLAST of MELO3C019956.jh1.t1 vs. NCBI nr
Match: XP_004140942.1 (probable F-actin-capping protein subunit beta [Cucumis sativus] >KGN46096.1 hypothetical protein Csa_005513 [Cucumis sativus]) HSP 1 Score: 519 bits (1336), Expect = 1.05e-185 Identity = 253/256 (98.83%), Postives = 256/256 (100.00%), Query Frame = 0
BLAST of MELO3C019956.jh1.t1 vs. NCBI nr
Match: XP_038886631.1 (probable F-actin-capping protein subunit beta isoform X3 [Benincasa hispida]) HSP 1 Score: 516 bits (1330), Expect = 8.64e-185 Identity = 252/256 (98.44%), Postives = 255/256 (99.61%), Query Frame = 0
BLAST of MELO3C019956.jh1.t1 vs. NCBI nr
Match: XP_022992687.1 (probable F-actin-capping protein subunit beta [Cucurbita maxima]) HSP 1 Score: 511 bits (1317), Expect = 8.29e-183 Identity = 249/256 (97.27%), Postives = 254/256 (99.22%), Query Frame = 0
BLAST of MELO3C019956.jh1.t1 vs. NCBI nr
Match: XP_022938738.1 (probable F-actin-capping protein subunit beta [Cucurbita moschata] >XP_023549747.1 probable F-actin-capping protein subunit beta isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 510 bits (1313), Expect = 3.38e-182 Identity = 248/256 (96.88%), Postives = 253/256 (98.83%), Query Frame = 0
BLAST of MELO3C019956.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q9M9G7 (Probable F-actin-capping protein subunit beta OS=Arabidopsis thaliana OX=3702 GN=At1g71790 PE=1 SV=1) HSP 1 Score: 427.2 bits (1097), Expect = 1.3e-118 Identity = 202/255 (79.22%), Postives = 231/255 (90.59%), Query Frame = 0
BLAST of MELO3C019956.jh1.t1 vs. ExPASy Swiss-Prot
Match: P14315 (F-actin-capping protein subunit beta isoforms 1 and 2 OS=Gallus gallus OX=9031 GN=CAPZB PE=1 SV=3) HSP 1 Score: 256.1 bits (653), Expect = 4.1e-67 Identity = 133/248 (53.63%), Postives = 178/248 (71.77%), Query Frame = 0
BLAST of MELO3C019956.jh1.t1 vs. ExPASy Swiss-Prot
Match: P79136 (F-actin-capping protein subunit beta OS=Bos taurus OX=9913 GN=CAPZB PE=1 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 5.3e-67 Identity = 133/248 (53.63%), Postives = 179/248 (72.18%), Query Frame = 0
BLAST of MELO3C019956.jh1.t1 vs. ExPASy Swiss-Prot
Match: P47756 (F-actin-capping protein subunit beta OS=Homo sapiens OX=9606 GN=CAPZB PE=1 SV=4) HSP 1 Score: 255.8 bits (652), Expect = 5.3e-67 Identity = 133/248 (53.63%), Postives = 179/248 (72.18%), Query Frame = 0
BLAST of MELO3C019956.jh1.t1 vs. ExPASy Swiss-Prot
Match: P47757 (F-actin-capping protein subunit beta OS=Mus musculus OX=10090 GN=Capzb PE=1 SV=3) HSP 1 Score: 255.8 bits (652), Expect = 5.3e-67 Identity = 133/248 (53.63%), Postives = 179/248 (72.18%), Query Frame = 0
BLAST of MELO3C019956.jh1.t1 vs. ExPASy TrEMBL
Match: A0A1S3C3Y3 (F-actin-capping protein subunit beta OS=Cucumis melo OX=3656 GN=LOC103496568 PE=3 SV=1) HSP 1 Score: 522 bits (1345), Expect = 2.16e-187 Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0
BLAST of MELO3C019956.jh1.t1 vs. ExPASy TrEMBL
Match: A0A0A0KEA7 (F-actin-capping protein subunit beta OS=Cucumis sativus OX=3659 GN=Csa_6G052710 PE=3 SV=1) HSP 1 Score: 519 bits (1336), Expect = 5.09e-186 Identity = 253/256 (98.83%), Postives = 256/256 (100.00%), Query Frame = 0
BLAST of MELO3C019956.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6J1JQL1 (F-actin-capping protein subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111488953 PE=3 SV=1) HSP 1 Score: 511 bits (1317), Expect = 4.02e-183 Identity = 249/256 (97.27%), Postives = 254/256 (99.22%), Query Frame = 0
BLAST of MELO3C019956.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6J1FJR7 (F-actin-capping protein subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111444872 PE=3 SV=1) HSP 1 Score: 510 bits (1313), Expect = 1.64e-182 Identity = 248/256 (96.88%), Postives = 253/256 (98.83%), Query Frame = 0
BLAST of MELO3C019956.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6J1BVP9 (F-actin-capping protein subunit beta OS=Momordica charantia OX=3673 GN=LOC111006134 PE=3 SV=1) HSP 1 Score: 496 bits (1277), Expect = 4.86e-177 Identity = 239/252 (94.84%), Postives = 249/252 (98.81%), Query Frame = 0
BLAST of MELO3C019956.jh1.t1 vs. TAIR 10
Match: AT1G71790.1 (Subunits of heterodimeric actin filament capping protein Capz superfamily ) HSP 1 Score: 427.2 bits (1097), Expect = 9.5e-120 Identity = 202/255 (79.22%), Postives = 231/255 (90.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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