MELO3C018723.1 (mRNA) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAGAAAAGAAAAGAAAAAAGAAAGCAAGTTAATGTGGCCCATAACATGTCTATTCAATAGCTCCATGATTTGATTTGCATCTTCTTCCACTCTCTCCCACACTCTTCTTCTCTATTCATTTCACCTTCCCTTTGAAAAACATTTTGCCTTATTTAGCAAAATAAAGTTCTATATCATTTTGATCCAATACAAACCCAAAAGGAAAACAAAGAAAGAAGAAGGGGAAAAAAATGTCAATCGAAGGATCAATTAGCAAAGATTTTTCAGAAGGATCTTCATCAAGTTCTGGTGGTGGAAGTACTCATGGATCAACAACCCCAAGTAGATATGAATCACAAAAAAGAAGAGATTGGAACACATTTTGCCAATATTTGAAGAATCAAAGGCCACCAGTTCCTCTTTCTCATTGTAATTGCAACCAAGTATTGGAATTTTTAAGGTACCTCGATCAATTTGGTAAAACAAAAGTTCATATTCAAGGTTGTATGTTTTATGGACAGCCTGAGCCACCTGCCCCTTGTACTTGTCCATTAAGACAAGCTTGGGGAAGTTTAGATGCTTTAATTGGGAGATTAAGAGCTGCTTATGAAGAAAATGGTGGTTCTCAAGAGACTAATCCTTTTGCTAGTGGTGCAATTAGGGTTTATCTTAGGGATGTTAGGGAATGTCAAGCTAAAGCAAGGGGAATTCCTTACAAAAAGAAGAAGAAGAAGACTAGTACTATTAATCAAACCAAAGGAGGAGGTCATGATGATCAAGATTCTAGCTCAACCTCCATGATGCACTTTGTGCCTTGAGCATCTCTATCAAACCCTATCTCCCTTTCTCAAAACTATTTACATATGGTAATTAAATTTAACTCTATACTAAATACTTATATCATCTTCTTTTTGTTTGTTCGATCATGCCCAGTCGATGTCGAAATTTAACGTTTAAGATAGTTAATTAATCAAAATCTACTTTTGGGTTTGAGATATATATGATGAAAGTTTTATAAATGTGTTAACCTAATTAATATTTCTAGCTACACCTTCTGATTCCTCTTATCCTCTAGTATATCTGGCTCAAGAAAATTAGATATACGTGTGATAATATATATAAAAGTAGTTGAAGTTGAATTATTATCCTTGAAATTTTTGGAGTATACGTGTTATGATCTTTGTTTGTTTCAAATTTCTTTTATCAATTTTAGGATGTGTTCTGTATCCTATCTGAATAATCACAAAAGATTACCTATAACAACTCTACGTCTATGACATAGAGTTTAAAATATAATGGAACTTTGATACTAATTAATGGTAAGTAAGTGTGATTTAAGGTTATTTGGATATAGTTCTTCTCTATATATAAGCATTCTGAAAGTAAACTCATGCATTTCTAGGATGATTGTGAATATATTCTCTATCATTCTTTTTAATTTCTTCAATAAAATGTGATGTTTTTTATAAAGAAAATTAGTTAATTAAGTTAATATTCTTGTCTTATGACAAAAATCATGTCCTTAATTGGTAATGTATTTTGCAATAGTGATATAAAAGTTTGAAGTGTGCTTTATTGTGTAGGGCTTTAAATATTTGTTAATCTTCTTATAATCTCTTCTATTTCTGAAATATCTGTATGATTTATTGTCACAACCAAATCTCTATTATTTGCATTATATGAGACACACACCCATGCTATTCACTATTTTAATTGTTAAATTAATGAACCACTAATTGTGTGTTTTTTTTTTTTAGAAAAAGAAACTCATGAAATATTATTTATTTTATTTAAGTTTTACCTTCGTACTATGTCTAGATTTGCTTCTTGTCCAATATTAGATTTTGTGGGTCACTGAGTTATATTCCATCATCTAAATGTTTGGACTTGAAAGTCTTTTGATATATATTCCTTATTTCCCTCTTTTTTCTTTTTCCTTTTTTCCTTTTCCCCAAAAATCTGCTTAAATTAATTTTCTTGGATCCTTCCTACAAATTTAGTTTTTAGAAAAACAACAACTAGGTTATAAACTAGCTAGGGTTTTATTTTAATTCCAAAATGCAAACCCCATCAATGGTTTTTCATTCACTTGCATAATTATTCAGTGGATTTAAAGTTTTCAAACCAAATTAAAGTGTCTTTTGTTTATGTTTCCTTGTCTCTTCTTGTCTTTAATTGAGAATTTTATGAAATTGAGTTATGTTCATCACGTTAATGCTTTTATATACATATAACCATATATGTTGGTTGCTTATTAGAAGGTAAATTCATTTATATTCAATTTCAAATATTGTATTGTTTATATTTGTTTTGTTTGACAGAGTGTGTGTGTGTGTTTTTTTTTTTTTTTTTTTTGTAATATGTAGATGAGAAAATCGAACTTTCAACTTTTAAGTTATCGTATATACTTGATGTCAATTGAGTTATGTTTCTTTTGATTAAGTATGGTGATAGGAATGTTGTTGTTAACCGAAAGAGACTTTGGAAGCATTATTAAACACTTAATGCAGGGAGAGAATAAGATTCACAAATTAGGTCAATGAATCTTTATAGTTCACTTTTAGTTTAGGTTATTTGTTGGTAGTACATATATGTTTCTTGCAAGTATATTTAGCCACATGATCTTCACATTTGCTTCATGACATTTTCCATGTGTAGGGAGTCATTTGAATTATAATTTTCTCATGTTCATCAACTTAATACTTGCTTTAAATAATTATTAAAAACATGCTTAGAATGATTTAATTTTGTATTTGTTTTTTTCTTGGGTATGACCAACTTTCTTTCAACCTTTGATAAACTATATATATCTAACTATACATTATTATTATTGTTATTGTTATATTTTTGTATTTGCAGGGAATATATATTAGAGATGAAGGGACCAAGGACAAGTGAAGAACTGAGAGAAGAAATTTGATCATAAGATAAAATATAAAATTATATTTTAAGTGGATTGGGGGGATAGAATCTCTATCAAATTCTATTAAAGCCAATAGTACTTATGATCAGAGAGTTTTCATTTCCCCTTATGCCTTTTGAATTTTTCTCAGCTTTTGATATATCACAAAACTCTCAATGTGTACTTAATTTGGCTGAGCTTTGTAATATGTGTGCTGTGTGCATGCTTGGTTTGTACTCTTTTATCCTTTAACTTGTGCTTTCTTTGCCTCTTTCTATGCAACTTGTAATGGCTATTAAAGAGATGCTTACTTAGCATGATCATTATTTGAATCATATGTACTCTTTTAA GGAGAAAAGAAAAGAAAAAAGAAAGCAAGTTAATGTGGCCCATAACATGTCTATTCAATAGCTCCATGATTTGATTTGCATCTTCTTCCACTCTCTCCCACACTCTTCTTCTCTATTCATTTCACCTTCCCTTTGAAAAACATTTTGCCTTATTTAGCAAAATAAAGTTCTATATCATTTTGATCCAATACAAACCCAAAAGGAAAACAAAGAAAGAAGAAGGGGAAAAAAATGTCAATCGAAGGATCAATTAGCAAAGATTTTTCAGAAGGATCTTCATCAAGTTCTGGTGGTGGAAGTACTCATGGATCAACAACCCCAAGTAGATATGAATCACAAAAAAGAAGAGATTGGAACACATTTTGCCAATATTTGAAGAATCAAAGGCCACCAGTTCCTCTTTCTCATTGTAATTGCAACCAAGTATTGGAATTTTTAAGGTACCTCGATCAATTTGGTAAAACAAAAGTTCATATTCAAGGTTGTATGTTTTATGGACAGCCTGAGCCACCTGCCCCTTGTACTTGTCCATTAAGACAAGCTTGGGGAAGTTTAGATGCTTTAATTGGGAGATTAAGAGCTGCTTATGAAGAAAATGGTGGTTCTCAAGAGACTAATCCTTTTGCTAGTGGTGCAATTAGGGTTTATCTTAGGGATGTTAGGGAATGTCAAGCTAAAGCAAGGGGAATTCCTTACAAAAAGAAGAAGAAGAAGACTAGTACTATTAATCAAACCAAAGGAGGAGGTCATGATGATCAAGATTCTAGCTCAACCTCCATGATGCACTTTGTGCCTTGAGCATCTCTATCAAACCCTATCTCCCTTTCTCAAAACTATTTACATATGGGAATATATATTAGAGATGAAGGGACCAAGGACAAGTGAAGAACTGAGAGAAGAAATTTGATCATAAGATAAAATATAAAATTATATTTTAAGTGGATTGGGGGGATAGAATCTCTATCAAATTCTATTAAAGCCAATAGTACTTATGATCAGAGAGTTTTCATTTCCCCTTATGCCTTTTGAATTTTTCTCAGCTTTTGATATATCACAAAACTCTCAATGTGTACTTAATTTGGCTGAGCTTTGTAATATGTGTGCTGTGTGCATGCTTGGTTTGTACTCTTTTATCCTTTAACTTGTGCTTTCTTTGCCTCTTTCTATGCAACTTGTAATGGCTATTAAAGAGATGCTTACTTAGCATGATCATTATTTGAATCATATGTACTCTTTTAA ATGTCAATCGAAGGATCAATTAGCAAAGATTTTTCAGAAGGATCTTCATCAAGTTCTGGTGGTGGAAGTACTCATGGATCAACAACCCCAAGTAGATATGAATCACAAAAAAGAAGAGATTGGAACACATTTTGCCAATATTTGAAGAATCAAAGGCCACCAGTTCCTCTTTCTCATTGTAATTGCAACCAAGTATTGGAATTTTTAAGGTACCTCGATCAATTTGGTAAAACAAAAGTTCATATTCAAGGTTGTATGTTTTATGGACAGCCTGAGCCACCTGCCCCTTGTACTTGTCCATTAAGACAAGCTTGGGGAAGTTTAGATGCTTTAATTGGGAGATTAAGAGCTGCTTATGAAGAAAATGGTGGTTCTCAAGAGACTAATCCTTTTGCTAGTGGTGCAATTAGGGTTTATCTTAGGGATGTTAGGGAATGTCAAGCTAAAGCAAGGGGAATTCCTTACAAAAAGAAGAAGAAGAAGACTAGTACTATTAATCAAACCAAAGGAGGAGGTCATGATGATCAAGATTCTAGCTCAACCTCCATGATGCACTTTGTGCCTTGA MSIEGSISKDFSEGSSSSSGGGSTHGSTTPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCNCNQVLEFLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSQETNPFASGAIRVYLRDVRECQAKARGIPYKKKKKKTSTINQTKGGGHDDQDSSSTSMMHFVP Homology
BLAST of MELO3C018723.1 vs. NCBI nr
Match: XP_008455303.1 (PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Cucumis melo]) HSP 1 Score: 388.3 bits (996), Expect = 3.9e-104 Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0
BLAST of MELO3C018723.1 vs. NCBI nr
Match: KAA0031563.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Cucumis melo var. makuwa] >TYK07014.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Cucumis melo var. makuwa]) HSP 1 Score: 383.6 bits (984), Expect = 9.5e-103 Identity = 188/189 (99.47%), Postives = 188/189 (99.47%), Query Frame = 0
BLAST of MELO3C018723.1 vs. NCBI nr
Match: XP_004136831.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Cucumis sativus] >KGN43628.1 hypothetical protein Csa_017146 [Cucumis sativus]) HSP 1 Score: 371.3 bits (952), Expect = 4.9e-99 Identity = 186/190 (97.89%), Postives = 187/190 (98.42%), Query Frame = 0
BLAST of MELO3C018723.1 vs. NCBI nr
Match: XP_038887380.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Benincasa hispida]) HSP 1 Score: 352.4 bits (903), Expect = 2.3e-93 Identity = 176/192 (91.67%), Postives = 181/192 (94.27%), Query Frame = 0
BLAST of MELO3C018723.1 vs. NCBI nr
Match: XP_022930813.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita moschata]) HSP 1 Score: 313.9 bits (803), Expect = 9.2e-82 Identity = 157/188 (83.51%), Postives = 166/188 (88.30%), Query Frame = 0
BLAST of MELO3C018723.1 vs. ExPASy Swiss-Prot
Match: Q9S7R3 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Arabidopsis thaliana OX=3702 GN=LSH10 PE=1 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 1.4e-72 Identity = 137/176 (77.84%), Postives = 145/176 (82.39%), Query Frame = 0
BLAST of MELO3C018723.1 vs. ExPASy Swiss-Prot
Match: A2XED8 (Protein G1-like7 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_10694 PE=3 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 5.7e-58 Identity = 109/163 (66.87%), Postives = 128/163 (78.53%), Query Frame = 0
BLAST of MELO3C018723.1 vs. ExPASy Swiss-Prot
Match: Q941W1 (Protein G1-like7 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L7 PE=1 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 5.7e-58 Identity = 109/163 (66.87%), Postives = 128/163 (78.53%), Query Frame = 0
BLAST of MELO3C018723.1 vs. ExPASy Swiss-Prot
Match: B8AH02 (Protein G1-like3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_05696 PE=3 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 2.2e-57 Identity = 109/161 (67.70%), Postives = 128/161 (79.50%), Query Frame = 0
BLAST of MELO3C018723.1 vs. ExPASy Swiss-Prot
Match: Q0DZF3 (Protein G1-like3 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L3 PE=1 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 2.2e-57 Identity = 109/161 (67.70%), Postives = 128/161 (79.50%), Query Frame = 0
BLAST of MELO3C018723.1 vs. ExPASy TrEMBL
Match: A0A1S3C1B9 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Cucumis melo OX=3656 GN=LOC103495500 PE=3 SV=1) HSP 1 Score: 388.3 bits (996), Expect = 1.9e-104 Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0
BLAST of MELO3C018723.1 vs. ExPASy TrEMBL
Match: A0A5D3C6X1 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003300 PE=3 SV=1) HSP 1 Score: 383.6 bits (984), Expect = 4.6e-103 Identity = 188/189 (99.47%), Postives = 188/189 (99.47%), Query Frame = 0
BLAST of MELO3C018723.1 vs. ExPASy TrEMBL
Match: A0A0A0K2D1 (ALOG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G048120 PE=3 SV=1) HSP 1 Score: 371.3 bits (952), Expect = 2.4e-99 Identity = 186/190 (97.89%), Postives = 187/190 (98.42%), Query Frame = 0
BLAST of MELO3C018723.1 vs. ExPASy TrEMBL
Match: A0A6J1EWG4 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita moschata OX=3662 GN=LOC111437182 PE=3 SV=1) HSP 1 Score: 313.9 bits (803), Expect = 4.5e-82 Identity = 157/188 (83.51%), Postives = 166/188 (88.30%), Query Frame = 0
BLAST of MELO3C018723.1 vs. ExPASy TrEMBL
Match: A0A6J1JNV9 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita maxima OX=3661 GN=LOC111486170 PE=3 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 3.2e-80 Identity = 157/188 (83.51%), Postives = 163/188 (86.70%), Query Frame = 0
BLAST of MELO3C018723.1 vs. TAIR 10
Match: AT2G42610.1 (Protein of unknown function (DUF640) ) HSP 1 Score: 273.9 bits (699), Expect = 9.9e-74 Identity = 137/176 (77.84%), Postives = 145/176 (82.39%), Query Frame = 0
BLAST of MELO3C018723.1 vs. TAIR 10
Match: AT2G42610.2 (Protein of unknown function (DUF640) ) HSP 1 Score: 273.9 bits (699), Expect = 9.9e-74 Identity = 137/176 (77.84%), Postives = 145/176 (82.39%), Query Frame = 0
BLAST of MELO3C018723.1 vs. TAIR 10
Match: AT1G07090.1 (Protein of unknown function (DUF640) ) HSP 1 Score: 220.3 bits (560), Expect = 1.3e-57 Identity = 97/133 (72.93%), Postives = 117/133 (87.97%), Query Frame = 0
BLAST of MELO3C018723.1 vs. TAIR 10
Match: AT3G23290.2 (Protein of unknown function (DUF640) ) HSP 1 Score: 219.2 bits (557), Expect = 2.9e-57 Identity = 109/161 (67.70%), Postives = 127/161 (78.88%), Query Frame = 0
BLAST of MELO3C018723.1 vs. TAIR 10
Match: AT1G78815.1 (Protein of unknown function (DUF640) ) HSP 1 Score: 216.5 bits (550), Expect = 1.9e-56 Identity = 111/190 (58.42%), Postives = 133/190 (70.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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