MELO3C018623.jh1.t1 (mRNA) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonstart_codonCDSpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.CTACGTCGTCGTTTCGTAATACTCGACAGACTATAGTGAAGTATGCAGCGTAACTGCTTACGCGTTGAATCGGGCAGCTCTCACGTAATCTTCAAAGCCGCCTCCCATGGCTTCCACTGCTACTTCCCTTCCTTCCCATATATTCAAATTCTTCACTCTTCTCTCTACCAACCCATTATTGCCCACTCAACACACAGATTCAGATGAGTTTTGGGGGATTACTTGGTTTTCAATATGGCATAGTTCAGGCTCCGCTTGGACCTGATATCTCCGGTCCCGAACTCGTTGCTGCCGTTGCCAATGCCGGTGGACTTGGTCTTCTCCGAGCCCCCGATTGGGTACTTTTACTCTTTATTCTTTCTTTCTTTCTTTTTTTATTCCTTTACCCATCTTGGAAATGAATTTAATGTGTTGTGGAGAAGTATCTCTGATGTGCGATACGTGAGTCGATACGGAGTTTCTTCTTTTGTTGATTGATTGTTCGATCGTACGTATTCGGATTTTAAAACATTTTATTCTTGATCGATTTGAATGTTTGGCGTTTTAGTTTTTGCAACTGCTTGTTGCATGGTTTTGTAGGAATTCGGACGATTTTGGTGATGATTGGTTATGGAATTATGGAGGAGTGTTGGGTTTAACTGGGTACTTAGTCGGGGGAATTGATAATGTTAATGAAGAGTTGGAGCATTGATCCTGTCAATCTGATATGAACAGTTTGTATATGATATGAATGGAAAGAATTTTATTAAAATTATGGATATAATTAAATGTACCACAACCTTTTATGTAAATTTGTGATTTAACTTACTCATTTCTATCTAATTAATATTGATTTTCATTTGTTGTACTCACAAGTGCGGAAGTATGGATATAATTAAAATTATTGTTTAGGATTAATAGGTGATGCTTAAAAATTTGTATGTGTCCCAGGAGTCACCTGATTATGTACGAGAATTGATAAGGAAGACCCGAGCGTTAACGGATAAACCATTTGGAATAGGTGTCATTTTAGCATTTCCTCACGAGCAAAATCTGAAGGCCATATTAGATGAGAAAGTAGCTGTTGTGCAAGTTTACTGGGGAGAATGTTCGAAGGATCTTGTGGATCAAGTTCATTCTGCTGGGGTGAAAATTATTCCACAAGTGAGTGTTCTCTTGCAAAGCATGTTAACAATGCATTTCCCAAGGATCAAATCAAGTCTGATAGGTTAATCTCATCATTAAACTTTTTATGCATGGTTGTGGTGGCTTAATTTCTATAAAAACATTTTGTTTATTGGAAAAATTTTGTGCATGGACGTGGAACTTGGAAGTATAGTCTGAAATCATGTGCTTATCTTGTTTTCTAGTCTATCACTTCAGGCTTCATTATTCTGTTCTAGGGATGTTATTGGTCTTCTACTCATATTGTGGCATGTTGCAACTTAAAAAATACTTTTGCAGGTTGGGAGTGTTGAAGAAGCGAGTAAAGCAGTTGATGCTGGCGTTGATGCAATAATTGTGCAAGGTCGGGAAGCAGGAGGGCATGTTATTGGTCAAGTATAGATCTTCTTCTTCCCGTTAATTTCATTAATTCATGATCCCATTGTGTTTGTTTCCAACTTTCCAGACTTCTTCCATTATAGGTTTTTTCCCATCCTCTTAATCATTTGGAGGCTATGTTTTTTTCCGGTTCTTCTCCTTAGTAAAACATTCTCTAAGTTACTAGAAAGGAAAGAAATTAACAAGGAAGATAATTTGACTTAGATTAGAAAGCTAATTCATCAAACATCTGTTTCTCAATTCATTAAGAGGCTGTTGTCTTAGTTCAGGTACCCACATACTTACCCTGCTCCAGGTTCACCTTTTGAAGAATATTCAACATTGGTTTCGTTGACACAATGTTTATGTTAGATGCATGTATTCAGTTTGAAAATCACCTTTGGAGAGAAGCAGAATTTAAGAAATCGATCTTTATCATATAAGTATTTGAGCATTCTTCCTTTTTGACATTAATCATCCATGCGTATATGTTTTAAGTAATGCCTAGTTTTCTTCTTTAAATTTCAAACTGCTGGTTTTTTATTTGCTGCTTCCAGTCGGTGGATATTACTTTGGTTCATGCTTCATTAGTCACATTCTTCATCTTTCTTCACATTTGTATTCCAACTATATCGTAACTTATCTCAAATCTATATCTTTTTTCATTATCAGAAAAAATTGAAATCGACTACAGAAAGTTGACTTGGTTCTTTACAGGAAGGTTTGATTTCCATCTTACCAAGGGTAGTTGAAATTGTTGGGAATGAAGATATACCTGTAATTGCGGCTGGCAGTATTTCAGATTCCCGAGGTTATGTTGCTGCCTTGGCCCTTGGCGCTCGTGGTGTCTGCCTTGGAACTAGGTTAGAAAACCTCAACTGTTATCAGTCACAACTTAGAGAACTTATTGCAAAAACCTGGTAGATCCATGCTACAAAATATCGCTCAATTTGAAACAATTTCCAGCATTAAAGTAGAATGTTCACACTTTTCGGTCAGGTTTGGCTGAGAGTCAATATATAAGTATGATAATAATGCCAGTTCAGAAACTTCATTATTGGTCCATGACATGTATTCTTAAATATATGTCTAATTTTGGATCATCTACACCATGGAAATATAGCCATGAGAATGGTGTTGGAGGAAGGTTTAAGGTTGAGTGGCCGTATCATAATCCATCTATTAAATAGTTCAGAGGCAGAAAACCTGTCTTTCTTTGGTGTAATCCAAAAGTTGCCGTTATTCTTATTATTATTGTAATTGGAACGATTGTATAATCTTATAACGAAACAAATCTCATAAATTTTAGGTAATGCAACTATTGCTCTTTTGCATCATCATAATATGAGTTAAATGGAATATTGCAGATTTGTTGCTACTGAAGAAAGCCATGCTCACCCTACATACAAGAGGAAGTTGGTGGAAATGGAAGCAACCGATTATACAAACATTTTCGGCCGCGCAAGATGGCCTGGTGCGCCACAGCGTGTTCTACAGACTCCCTTTTACGATGATTGGAAGTCACTTCCTGCCAATGAAAATGAAAGCAACCAGCCTGTCATCGGGCGCTCAACAATTAATGGCTTGGTGAGCTCCTCCTTTCATCTCTTTTCTACCTAAACAAGTCCACATGCTTGAGAACAAATTCTGCAATTAGTATGTAAGCTGGACCACTAAAAGATTAAATATTTAGGTTGAGGGTATATTCTGTTCTGCTCTTATCTAAATCATCCTTCATTCTTGGTACAGGACATAGATATACGGCGCTTTGCGGGTACTGTGCCAAATGCAACGACAAAAGGTGACATCGAGAGCATGGCAATGTATGCAGGGCAAGGAGTAGGACTGATCAAGGAGATTCTACCAGCGGGAGAAGTGGTAAGGAGGCTGGTGGAAGGTGCTCAACATTTGATCCAGACACATCTTAGTAGTTTTGTTCATAAAGATTGATGCTCGTAGCTGCAATACTATTCTTTTAAATTTTCTTGAAGAAATAAGATCGAAAATCCCTATGTAGTTTTAGATGAACGGCTGGAAATTGATCTCCACTGAGTGTTAATCATGAACGCAACGAACCTCATGTTTAAATACAGCAGTGATTG CTACGTCGTCGTTTCGTAATACTCGACAGACTATAGTGAAGTATGCAGCGTAACTGCTTACGCGTTGAATCGGGCAGCTCTCACGTAATCTTCAAAGCCGCCTCCCATGGCTTCCACTGCTACTTCCCTTCCTTCCCATATATTCAAATTCTTCACTCTTCTCTCTACCAACCCATTATTGCCCACTCAACACACAGATTCAGATGAGTTTTGGGGGATTACTTGGTTTTCAATATGGCATAGTTCAGGCTCCGCTTGGACCTGATATCTCCGGTCCCGAACTCGTTGCTGCCGTTGCCAATGCCGGTGGACTTGGTCTTCTCCGAGCCCCCGATTGGGAGTCACCTGATTATGTACGAGAATTGATAAGGAAGACCCGAGCGTTAACGGATAAACCATTTGGAATAGGTGTCATTTTAGCATTTCCTCACGAGCAAAATCTGAAGGCCATATTAGATGAGAAAGTAGCTGTTGTGCAAGTTTACTGGGGAGAATGTTCGAAGGATCTTGTGGATCAAGTTCATTCTGCTGGGGTGAAAATTATTCCACAAGTTGGGAGTGTTGAAGAAGCGAGTAAAGCAGTTGATGCTGGCGTTGATGCAATAATTGTGCAAGGTCGGGAAGCAGGAGGGCATGTTATTGGTCAAGAAGGTTTGATTTCCATCTTACCAAGGGTAGTTGAAATTGTTGGGAATGAAGATATACCTGTAATTGCGGCTGGCAGTATTTCAGATTCCCGAGGTTATGTTGCTGCCTTGGCCCTTGGCGCTCGTGGTGTCTGCCTTGGAACTAGATTTGTTGCTACTGAAGAAAGCCATGCTCACCCTACATACAAGAGGAAGTTGGTGGAAATGGAAGCAACCGATTATACAAACATTTTCGGCCGCGCAAGATGGCCTGGTGCGCCACAGCGTGTTCTACAGACTCCCTTTTACGATGATTGGAAGTCACTTCCTGCCAATGAAAATGAAAGCAACCAGCCTGTCATCGGGCGCTCAACAATTAATGGCTTGGACATAGATATACGGCGCTTTGCGGGTACTGTGCCAAATGCAACGACAAAAGGTGACATCGAGAGCATGGCAATGTATGCAGGGCAAGGAGTAGGACTGATCAAGGAGATTCTACCAGCGGGAGAAGTGGTAAGGAGGCTGGTGGAAGGTGCTCAACATTTGATCCAGACACATCTTAGTAGTTTTGTTCATAAAGATTGATGCTCGTAGCTGCAATACTATTCTTTTAAATTTTCTTGAAGAAATAAGATCGAAAATCCCTATGTAGTTTTAGATGAACGGCTGGAAATTGATCTCCACTGAGTGTTAATCATGAACGCAACGAACCTCATGTTTAAATACAGCAGTGATTG ATGAGTTTTGGGGGATTACTTGGTTTTCAATATGGCATAGTTCAGGCTCCGCTTGGACCTGATATCTCCGGTCCCGAACTCGTTGCTGCCGTTGCCAATGCCGGTGGACTTGGTCTTCTCCGAGCCCCCGATTGGGAGTCACCTGATTATGTACGAGAATTGATAAGGAAGACCCGAGCGTTAACGGATAAACCATTTGGAATAGGTGTCATTTTAGCATTTCCTCACGAGCAAAATCTGAAGGCCATATTAGATGAGAAAGTAGCTGTTGTGCAAGTTTACTGGGGAGAATGTTCGAAGGATCTTGTGGATCAAGTTCATTCTGCTGGGGTGAAAATTATTCCACAAGTTGGGAGTGTTGAAGAAGCGAGTAAAGCAGTTGATGCTGGCGTTGATGCAATAATTGTGCAAGGTCGGGAAGCAGGAGGGCATGTTATTGGTCAAGAAGGTTTGATTTCCATCTTACCAAGGGTAGTTGAAATTGTTGGGAATGAAGATATACCTGTAATTGCGGCTGGCAGTATTTCAGATTCCCGAGGTTATGTTGCTGCCTTGGCCCTTGGCGCTCGTGGTGTCTGCCTTGGAACTAGATTTGTTGCTACTGAAGAAAGCCATGCTCACCCTACATACAAGAGGAAGTTGGTGGAAATGGAAGCAACCGATTATACAAACATTTTCGGCCGCGCAAGATGGCCTGGTGCGCCACAGCGTGTTCTACAGACTCCCTTTTACGATGATTGGAAGTCACTTCCTGCCAATGAAAATGAAAGCAACCAGCCTGTCATCGGGCGCTCAACAATTAATGGCTTGGACATAGATATACGGCGCTTTGCGGGTACTGTGCCAAATGCAACGACAAAAGGTGACATCGAGAGCATGGCAATGTATGCAGGGCAAGGAGTAGGACTGATCAAGGAGATTCTACCAGCGGGAGAAGTGGTAAGGAGGCTGGTGGAAGGTGCTCAACATTTGATCCAGACACATCTTAGTAGTTTTGTTCATAAAGATTGA MSFGGLLGFQYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWESPDYVRELIRKTRALTDKPFGIGVILAFPHEQNLKAILDEKVAVVQVYWGECSKDLVDQVHSAGVKIIPQVGSVEEASKAVDAGVDAIIVQGREAGGHVIGQEGLISILPRVVEIVGNEDIPVIAAGSISDSRGYVAALALGARGVCLGTRFVATEESHAHPTYKRKLVEMEATDYTNIFGRARWPGAPQRVLQTPFYDDWKSLPANENESNQPVIGRSTINGLDIDIRRFAGTVPNATTKGDIESMAMYAGQGVGLIKEILPAGEVVRRLVEGAQHLIQTHLSSFVHKD Homology
BLAST of MELO3C018623.jh1.t1 vs. NCBI nr
Match: XP_008455173.1 (PREDICTED: probable nitronate monooxygenase [Cucumis melo] >KAA0031461.1 putative nitronate monooxygenase [Cucumis melo var. makuwa] >TYK06915.1 putative nitronate monooxygenase [Cucumis melo var. makuwa]) HSP 1 Score: 666 bits (1718), Expect = 3.05e-241 Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0
BLAST of MELO3C018623.jh1.t1 vs. NCBI nr
Match: XP_031744639.1 (uncharacterized protein LOC101221123 [Cucumis sativus]) HSP 1 Score: 654 bits (1687), Expect = 1.62e-236 Identity = 329/336 (97.92%), Postives = 334/336 (99.40%), Query Frame = 0
BLAST of MELO3C018623.jh1.t1 vs. NCBI nr
Match: XP_022952200.1 (uncharacterized protein LOC111454946 [Cucurbita moschata] >KAG7011538.1 yrpB [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 644 bits (1662), Expect = 1.05e-232 Identity = 319/336 (94.94%), Postives = 330/336 (98.21%), Query Frame = 0
BLAST of MELO3C018623.jh1.t1 vs. NCBI nr
Match: XP_023511402.1 (uncharacterized protein LOC111776237 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 643 bits (1658), Expect = 4.27e-232 Identity = 319/336 (94.94%), Postives = 329/336 (97.92%), Query Frame = 0
BLAST of MELO3C018623.jh1.t1 vs. NCBI nr
Match: XP_038888874.1 (nitronate monooxygenase isoform X1 [Benincasa hispida]) HSP 1 Score: 642 bits (1656), Expect = 8.61e-232 Identity = 322/336 (95.83%), Postives = 328/336 (97.62%), Query Frame = 0
BLAST of MELO3C018623.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q0S7Q1 ((3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxyl-CoA dehydrogenase OS=Rhodococcus jostii (strain RHA1) OX=101510 GN=ipdC PE=3 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 8.6e-33 Identity = 94/239 (39.33%), Postives = 132/239 (55.23%), Query Frame = 0
BLAST of MELO3C018623.jh1.t1 vs. ExPASy Swiss-Prot
Match: P71847 ((3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxyl-CoA dehydrogenase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=ipdC PE=1 SV=3) HSP 1 Score: 136.0 bits (341), Expect = 8.1e-31 Identity = 91/247 (36.84%), Postives = 133/247 (53.85%), Query Frame = 0
BLAST of MELO3C018623.jh1.t1 vs. ExPASy Swiss-Prot
Match: B2TEK6 (Nitronate monooxygenase OS=Paraburkholderia phytofirmans (strain DSM 17436 / LMG 22146 / PsJN) OX=398527 GN=Bphyt_4144 PE=1 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 5.8e-29 Identity = 117/358 (32.68%), Postives = 164/358 (45.81%), Query Frame = 0
BLAST of MELO3C018623.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q9HWH9 (Nitronate monooxygenase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=nmoA PE=1 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 7.6e-29 Identity = 115/363 (31.68%), Postives = 162/363 (44.63%), Query Frame = 0
BLAST of MELO3C018623.jh1.t1 vs. ExPASy Swiss-Prot
Match: O05413 (Probable nitronate monooxygenase OS=Bacillus subtilis (strain 168) OX=224308 GN=yrpB PE=3 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.7e-26 Identity = 97/351 (27.64%), Postives = 165/351 (47.01%), Query Frame = 0
BLAST of MELO3C018623.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5A7SPI9 (Putative nitronate monooxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002230 PE=4 SV=1) HSP 1 Score: 666 bits (1718), Expect = 1.48e-241 Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0
BLAST of MELO3C018623.jh1.t1 vs. ExPASy TrEMBL
Match: A0A1S3C1I8 (probable nitronate monooxygenase OS=Cucumis melo OX=3656 GN=LOC103495406 PE=4 SV=1) HSP 1 Score: 666 bits (1718), Expect = 1.48e-241 Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0
BLAST of MELO3C018623.jh1.t1 vs. ExPASy TrEMBL
Match: A0A0A0K422 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G064010 PE=4 SV=1) HSP 1 Score: 654 bits (1687), Expect = 5.88e-236 Identity = 329/336 (97.92%), Postives = 334/336 (99.40%), Query Frame = 0
BLAST of MELO3C018623.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6J1GL38 (uncharacterized protein LOC111454946 OS=Cucurbita moschata OX=3662 GN=LOC111454946 PE=4 SV=1) HSP 1 Score: 644 bits (1662), Expect = 5.08e-233 Identity = 319/336 (94.94%), Postives = 330/336 (98.21%), Query Frame = 0
BLAST of MELO3C018623.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6J1I3E9 (uncharacterized protein LOC111470639 OS=Cucurbita maxima OX=3661 GN=LOC111470639 PE=4 SV=1) HSP 1 Score: 636 bits (1641), Expect = 8.06e-230 Identity = 315/335 (94.03%), Postives = 327/335 (97.61%), Query Frame = 0
BLAST of MELO3C018623.jh1.t1 vs. TAIR 10
Match: AT5G64250.2 (Aldolase-type TIM barrel family protein ) HSP 1 Score: 527.3 bits (1357), Expect = 8.8e-150 Identity = 251/321 (78.19%), Postives = 292/321 (90.97%), Query Frame = 0
BLAST of MELO3C018623.jh1.t1 vs. TAIR 10
Match: AT5G64250.1 (Aldolase-type TIM barrel family protein ) HSP 1 Score: 449.1 bits (1154), Expect = 3.1e-126 Identity = 214/280 (76.43%), Postives = 252/280 (90.00%), Query Frame = 0
BLAST of MELO3C018623.jh1.t1 vs. TAIR 10
Match: AT3G14150.1 (Aldolase-type TIM barrel family protein ) HSP 1 Score: 42.4 bits (98), Expect = 8.6e-04 Identity = 30/75 (40.00%), Postives = 41/75 (54.67%), Query Frame = 0
BLAST of MELO3C018623.jh1.t1 vs. TAIR 10
Match: AT3G14150.2 (Aldolase-type TIM barrel family protein ) HSP 1 Score: 42.4 bits (98), Expect = 8.6e-04 Identity = 30/75 (40.00%), Postives = 41/75 (54.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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