MELO3C014436.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C014436.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	RING-type domain-containing protein
Location	chr05: 2419841 .. 2421664 (-)
Sequence length	1649
RNA-Seq Expression	MELO3C014436.1
Synteny	MELO3C014436.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGAGATAAGAAGAGTTCCTTAAAGTAGAAAAGTAGCACAGCCGTAGATTTCAAGGATTTTATTTTGACCATTTCAAATTCATATGAGCTATCATGTTCATTTGAATACATGATTTACATGATTTTGATGTTCAAATAACACCCCTTGTAATGTCTAGAAGGTGTCACTTCAAGATTCAGTAGATTTGTGTTTGAAAGGATTTAAGCTTAGAAATGGGAGAGATGATGAACCACCCAACACTATCATGTGTTCATGTGTCACCTACCCTAAAGATTATTCTGTATTAACAATAATTTTCTGCAGGTTTGAGATACTTCACATCATGCAGTTAGTTCAGATGGTGGGCTTTCCTTTATTTTAGTTCAAAGGAAATGGAGCGAAAGAACCTCTTCCAACACACGGTTCGATTTGGACTAATTATTATATGCATTAAGGTCATACATAAAATATTTTTATTTAATACAGGTTTAGAAGGTAAAATGGTGTATTCTCGCCAGACACGGTTAGCTTGAATGACGCATAGGTCTACCTTTTCCCGCTCAAATAGGGGCACTAATTTGAATTAGGTACTCTCCAACCCACCTGAAGTCTTTGTTAGTGGTAGAGGTAGAGTTAAGAGTTAGAGAGAGAAATGTCAATTGTCAACAGAGCAATCAAACAAGGCGGGTCCCCTTTTCCATATAGATCGAGATCGATGCCTGCACGTTTATTGCTTTACTCTCTCTTCATTGCCTGCTGCGGCGCGCTCCCCTCCACTCCAATGCTAACCACAAAGACTTTGATCAATCACCCCATTCAATTCAACTACACAAGCTTTCCTTAGACCCAACTTCTTCAGTTCAGATATGGAATTGGAATGAATGGCAGACATGGCATGGCCCTTCGTTCTACTTCCCAGTCTCTCTCTTCTTCACCTCCACTTGACCATGGCGGACTTCTTTCAGCTCAGTTAATGACGTTCTATCCCTGAAGATCTACAGAAAGAAAACCCAAAACTGGTTAGTAGGATCATTCTCTCTTTCATTAAAAACCAACTTTTCTTTTCTTGATTTTGCTCGTTCTTTGTTCTGAAAAGACATTGTTTGAAGTATTCTTCTTTCTGGGTATCTCTGGTTTGTAATCTTCTCTGTTTCATTTCACACCATACTTCCTTTTCGGGGTTTGTTGTGTCAGATTGGCATCTAGAAGGAATTTGAAGAGGAAATGGAGCGGGCTAATCGAGGGCGGAGATGGGCCAATTTAAAGCAACGGCTAGGATTGAAGGGGATGGGGTGCTGTAGAGGTTCATGGAGTCCAACATCGTCAACTTTGACAATGATTGAAGGGTTTAGCTTAAGCCTCCATGGAAGCAGCCGCAGTCAAAGAGAAGATGGGGGTCGGAGCTCAGCAGCTTCCGGTATGAACTTGGCGATGGCTCTGGCGGCGGAGAGAAATTTGAGGAGTGACGAAGGAGGCCCCACGGGCGCTAGTGATGTGAAATCACTGATGAGATTGTTTGAAGAAATGGACGGTGGGGATTGGAAAACAAAACGAAAGGAAGGTGAGAATAACGGTGATTGGATGTGCTGCGTGTGCATGGAAAGGAGTAAAGGCGCGGCTTTTATTCCCTGTGGACACACCTTCTGTAGGGTATGTTCTAGGGAATTATGGCTTAACAGAGGCACGTGTCCCATCTGCAGCCGTTCGATCATTGAGATTCTTGACATTTTTTAAAATTTTTAAAAATTATTTTTGTTTTCGTAAATTATTATCTCAATGTGATTTGTTTTTTCTTTTTCTTTTTCTTTTTTTTTTTCTTTTTCCCTTTTTGTTTTATTTGTTGG

mRNA sequence

CTGAGATAAGAAGAGTTCCTTAAAGTAGAAAAGTAGCACAGCCGTAGATTTCAAGGATTTTATTTTGACCATTTCAAATTCATATGAGCTATCATGTTCATTTGAATACATGATTTACATGATTTTGATGTTCAAATAACACCCCTTGTAATGTCTAGAAGGTGTCACTTCAAGATTCAGTAGATTTGTGTTTGAAAGGATTTAAGCTTAGAAATGGGAGAGATGATGAACCACCCAACACTATCATGTGTTCATGTGTCACCTACCCTAAAGATTATTCTGTATTAACAATAATTTTCTGCAGGTTTGAGATACTTCACATCATGCAGTTAGTTCAGATGGTGGGCTTTCCTTTATTTTAGTTCAAAGGAAATGGAGCGAAAGAACCTCTTCCAACACACGGTTCGATTTGGACTAATTATTATATGCATTAAGGTCATACATAAAATATTTTTATTTAATACAGGTTTAGAAGGTAAAATGGTGTATTCTCGCCAGACACGGTTAGCTTGAATGACGCATAGGTCTACCTTTTCCCGCTCAAATAGGGGCACTAATTTGAATTAGGTACTCTCCAACCCACCTGAAGTCTTTGTTAGTGGTAGAGGTAGAGTTAAGAGTTAGAGAGAGAAATGTCAATTGTCAACAGAGCAATCAAACAAGGCGGGTCCCCTTTTCCATATAGATCGAGATCGATGCCTGCACGTTTATTGCTTTACTCTCTCTTCATTGCCTGCTGCGGCGCGCTCCCCTCCACTCCAATGCTAACCACAAAGACTTTGATCAATCACCCCATTCAATTCAACTACACAAGCTTTCCTTAGACCCAACTTCTTCAGTTCAGATATGGAATTGGAATGAATGGCAGACATGGCATGGCCCTTCGTTCTACTTCCCAGTCTCTCTCTTCTTCACCTCCACTTGACCATGGCGGACTTCTTTCAGCTCAGTTAATGACGTTCTATCCCTGAAGATCTACAGAAAGAAAACCCAAAACTGATTGGCATCTAGAAGGAATTTGAAGAGGAAATGGAGCGGGCTAATCGAGGGCGGAGATGGGCCAATTTAAAGCAACGGCTAGGATTGAAGGGGATGGGGTGCTGTAGAGGTTCATGGAGTCCAACATCGTCAACTTTGACAATGATTGAAGGGTTTAGCTTAAGCCTCCATGGAAGCAGCCGCAGTCAAAGAGAAGATGGGGGTCGGAGCTCAGCAGCTTCCGGTATGAACTTGGCGATGGCTCTGGCGGCGGAGAGAAATTTGAGGAGTGACGAAGGAGGCCCCACGGGCGCTAGTGATGTGAAATCACTGATGAGATTGTTTGAAGAAATGGACGGTGGGGATTGGAAAACAAAACGAAAGGAAGGTGAGAATAACGGTGATTGGATGTGCTGCGTGTGCATGGAAAGGAGTAAAGGCGCGGCTTTTATTCCCTGTGGACACACCTTCTGTAGGGTATGTTCTAGGGAATTATGGCTTAACAGAGGCACGTGTCCCATCTGCAGCCGTTCGATCATTGAGATTCTTGACATTTTTTAAAATTTTTAAAAATTATTTTTGTTTTCGTAAATTATTATCTCAATGTGATTTGTTTTTTCTTTTTCTTTTTCTTTTTTTTTTTCTTTTTCCCTTTTTGTTTTATTTGTTGG

Coding sequence (CDS)

ATGGAGCGGGCTAATCGAGGGCGGAGATGGGCCAATTTAAAGCAACGGCTAGGATTGAAGGGGATGGGGTGCTGTAGAGGTTCATGGAGTCCAACATCGTCAACTTTGACAATGATTGAAGGGTTTAGCTTAAGCCTCCATGGAAGCAGCCGCAGTCAAAGAGAAGATGGGGGTCGGAGCTCAGCAGCTTCCGGTATGAACTTGGCGATGGCTCTGGCGGCGGAGAGAAATTTGAGGAGTGACGAAGGAGGCCCCACGGGCGCTAGTGATGTGAAATCACTGATGAGATTGTTTGAAGAAATGGACGGTGGGGATTGGAAAACAAAACGAAAGGAAGGTGAGAATAACGGTGATTGGATGTGCTGCGTGTGCATGGAAAGGAGTAAAGGCGCGGCTTTTATTCCCTGTGGACACACCTTCTGTAGGGTATGTTCTAGGGAATTATGGCTTAACAGAGGCACGTGTCCCATCTGCAGCCGTTCGATCATTGAGATTCTTGACATTTTTTAA

Protein sequence

MERANRGRRWANLKQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEEMDGGDWKTKRKEGENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF

Homology

[Close]

BLAST of MELO3C014436.1 vs. NCBI nr
Match: KAA0061653.1 (zf-C3HC4_3 domain-containing protein [Cucumis melo var. makuwa] >TYK05853.1 zf-C3HC4_3 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 350.1 bits (897), Expect = 1.0e-92
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MERANRGRRWANLKQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQREDGGRS 60
           MERANRGRRWANLKQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQREDGGRS
Sbjct: 1   MERANRGRRWANLKQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQREDGGRS 60

Query: 61  SAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEEMDGGDWKTKRKEGENNGDWM 120
           SAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEEMDGGDWKTKRKEGENNGDWM
Sbjct: 61  SAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEEMDGGDWKTKRKEGENNGDWM 120

Query: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 170
           CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF
Sbjct: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 169

[Close]

BLAST of MELO3C014436.1 vs. NCBI nr
Match: KGN47968.1 (hypothetical protein Csa_002927 [Cucumis sativus])

HSP 1 Score: 336.7 bits (862), Expect = 1.2e-88
Identity = 162/169 (95.86%), Postives = 164/169 (97.04%), Query Frame = 0


Query: 1   MERANRGRRWANLKQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQREDGGRS 60
           MERANR RRW NL+QRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQ EDGGRS
Sbjct: 1   MERANRRRRWTNLRQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQGEDGGRS 60

Query: 61  SAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEEMDGGDWKTKRKEGENNGDWM 120
           SAASGMNLAMALAAERNLR+DEGGPTG SDVKSLMRLFEEMDGGDWKTKRKE ENNGDWM
Sbjct: 61  SAASGMNLAMALAAERNLRNDEGGPTGGSDVKSLMRLFEEMDGGDWKTKRKESENNGDWM 120

Query: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 170
           CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF
Sbjct: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 169

[Close]

BLAST of MELO3C014436.1 vs. NCBI nr
Match: XP_022953088.1 (RNA-binding protein MEX3B-like [Cucurbita moschata] >XP_022953089.1 RNA-binding protein MEX3B-like [Cucurbita moschata] >XP_022969345.1 RNA-binding protein MEX3B-like [Cucurbita maxima] >XP_022969346.1 RNA-binding protein MEX3B-like [Cucurbita maxima] >XP_023511758.1 RNA-binding protein MEX3B-like [Cucurbita pepo subsp. pepo] >XP_023511759.1 RNA-binding protein MEX3B-like [Cucurbita pepo subsp. pepo] >KAG6572419.1 hypothetical protein SDJN03_29147, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 322.8 bits (826), Expect = 1.8e-84
Identity = 155/169 (91.72%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 1   MERANRGRRWANLKQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQREDGGRS 60
           MER N GRRWANLKQRLGLKGMGCC GSWSPTSSTLTMIEG SLS HGSSRS REDG RS
Sbjct: 1   MERQNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARS 60

Query: 61  SAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEEMDGGDWKTKRKEGENNGDWM 120
           SA+SG+NLAMALAAERNLR+DEGGPTGA DVKSLMRLFEEMDGGDWKTKRKE EN GDWM
Sbjct: 61  SASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEEMDGGDWKTKRKESENTGDWM 120

Query: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 170
           CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPIC+RSIIEILDIF
Sbjct: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF 169

[Close]

BLAST of MELO3C014436.1 vs. NCBI nr
Match: XP_023531397.1 (uncharacterized protein LOC111793648 [Cucurbita pepo subsp. pepo] >XP_023531398.1 uncharacterized protein LOC111793648 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 293.1 bits (749), Expect = 1.5e-75
Identity = 146/170 (85.88%), Postives = 155/170 (91.18%), Query Frame = 0


Query: 1   MERANRGRRWANLKQRLGL-KGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQREDGGR 60
           MER NRG+RWANLKQRLGL KGMGCC GSWS TSSTLTMI+G  LS HGSSRS R+DG R
Sbjct: 62  MERPNRGQRWANLKQRLGLMKGMGCCGGSWSSTSSTLTMIDGIGLSRHGSSRSHRDDGTR 121

Query: 61  SSAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEEMDGGDWKTKRKEGENNGDW 120
           SSAASGMNLAMALAAERNL ++EGGPT   +VKSLMRLFEE+DGGDWKT+RKE ENNGDW
Sbjct: 122 SSAASGMNLAMALAAERNL-TEEGGPT-VGNVKSLMRLFEEIDGGDWKTRRKESENNGDW 181

Query: 121 MCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 170
           +CCVCMERSKGAAFIPCGHTFCRVCSRELWLN GTCPICSRSIIEILDIF
Sbjct: 182 LCCVCMERSKGAAFIPCGHTFCRVCSRELWLNGGTCPICSRSIIEILDIF 229

[Close]

BLAST of MELO3C014436.1 vs. NCBI nr
Match: KAG6589274.1 (hypothetical protein SDJN03_17839, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 293.1 bits (749), Expect = 1.5e-75
Identity = 146/170 (85.88%), Postives = 155/170 (91.18%), Query Frame = 0


Query: 1   MERANRGRRWANLKQRLGL-KGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQREDGGR 60
           MER NRG+RWANLKQRLGL KGMGCC GSWS TSSTLTMI+G  LS HGSSRS R+DG R
Sbjct: 62  MERPNRGQRWANLKQRLGLMKGMGCCGGSWSSTSSTLTMIDGIGLSRHGSSRSHRDDGTR 121

Query: 61  SSAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEEMDGGDWKTKRKEGENNGDW 120
           SSAASGMNLAMALAAERNL ++EGGPT   +VKSLMRLFEE+DGGDWKT+RKE ENNGDW
Sbjct: 122 SSAASGMNLAMALAAERNL-TEEGGPT-VGNVKSLMRLFEEIDGGDWKTRRKESENNGDW 181

Query: 121 MCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 170
           +CCVCMERSKGAAFIPCGHTFCRVCSRELWLN GTCPICSRSIIEILDIF
Sbjct: 182 LCCVCMERSKGAAFIPCGHTFCRVCSRELWLNGGTCPICSRSIIEILDIF 229

[Close]

BLAST of MELO3C014436.1 vs. ExPASy Swiss-Prot
Match: O35445 (E3 ubiquitin-protein ligase RNF5 OS=Mus musculus OX=10090 GN=Rnf5 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.9e-04
Identity = 24/72 (33.33%), Postives = 35/72 (48.61%), Query Frame = 0


Query: 95  MRLFEEMDGGDWKTKRKEGENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWL---- 154
           M   EE DGG     R+ G  +  + C +C+E ++ A    CGH +C  C  + WL    
Sbjct: 1   MAAAEEEDGGPEGPNRERGGASATFECNICLETAREAVVSVCGHLYCWPCLHQ-WLETRP 60

Query: 155 NRGTCPICSRSI 163
           +R  CP+C   I
Sbjct: 61  DRQECPVCKAGI 71

[Close]

BLAST of MELO3C014436.1 vs. ExPASy Swiss-Prot
Match: Q5M807 (E3 ubiquitin-protein ligase RNF5 OS=Rattus norvegicus OX=10116 GN=Rnf5 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.9e-04
Identity = 24/72 (33.33%), Postives = 35/72 (48.61%), Query Frame = 0


Query: 95  MRLFEEMDGGDWKTKRKEGENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWL---- 154
           M   EE DGG     R+ G  +  + C +C+E ++ A    CGH +C  C  + WL    
Sbjct: 1   MAAAEEEDGGPEGPNRERGGASATFECNICLETAREAVVSVCGHLYCWPCLHQ-WLETRP 60

Query: 155 NRGTCPICSRSI 163
           +R  CP+C   I
Sbjct: 61  DRQECPVCKAGI 71

[Close]

BLAST of MELO3C014436.1 vs. ExPASy Swiss-Prot
Match: B3H754 (E3 ubiquitin-protein ligase APD3 OS=Arabidopsis thaliana OX=3702 GN=APD3 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.2e-04
Identity = 16/51 (31.37%), Postives = 28/51 (54.90%), Query Frame = 0


Query: 120 MCCVCMERSKGAAFIPCGH-TFCRVCSRELWLNRGTCPICSRSIIEILDIF 170
           +C +C +  +   F+PCGH   C  C  ++   +G CPIC + +I +  I+
Sbjct: 352 LCAICFDAPRDCCFLPCGHCVSCYQCGTKIKRTKGRCPICRKKMIHVKRIY 402

[Close]

BLAST of MELO3C014436.1 vs. ExPASy Swiss-Prot
Match: Q99942 (E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens OX=9606 GN=RNF5 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.2e-04
Identity = 24/72 (33.33%), Postives = 33/72 (45.83%), Query Frame = 0


Query: 95  MRLFEEMDGGDWKTKRKEGENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWL---- 154
           M   EE DGG     R+ G     + C +C+E ++ A    CGH +C  C  + WL    
Sbjct: 1   MAAAEEEDGGPEGPNRERGGAGATFECNICLETAREAVVSVCGHLYCWPCLHQ-WLETRP 60

Query: 155 NRGTCPICSRSI 163
            R  CP+C   I
Sbjct: 61  ERQECPVCKAGI 71

[Close]

BLAST of MELO3C014436.1 vs. ExPASy Swiss-Prot
Match: P43254 (E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV=2)

HSP 1 Score: 46.2 bits (108), Expect = 4.2e-04
Identity = 21/64 (32.81%), Postives = 33/64 (51.56%), Query Frame = 0


Query: 99  EEMDGGDWKTKRKEGENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPIC 158
           E  DGG   ++    + + D +C +CM+  K A    CGH+FC +C      N+  CP C
Sbjct: 30  ENDDGGSGGSEIGAPDLDKDLLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCC 89

Query: 159 SRSI 163
           S+ +
Sbjct: 90  SQHL 93

[Close]

BLAST of MELO3C014436.1 vs. ExPASy TrEMBL
Match: A0A5A7V0I3 (Zf-C3HC4_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1465G00070 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 5.1e-93
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MERANRGRRWANLKQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQREDGGRS 60
           MERANRGRRWANLKQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQREDGGRS
Sbjct: 1   MERANRGRRWANLKQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQREDGGRS 60

Query: 61  SAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEEMDGGDWKTKRKEGENNGDWM 120
           SAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEEMDGGDWKTKRKEGENNGDWM
Sbjct: 61  SAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEEMDGGDWKTKRKEGENNGDWM 120

Query: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 170
           CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF
Sbjct: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 169

[Close]

BLAST of MELO3C014436.1 vs. ExPASy TrEMBL
Match: A0A0A0KEL6 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G421620 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 5.8e-89
Identity = 162/169 (95.86%), Postives = 164/169 (97.04%), Query Frame = 0


Query: 1   MERANRGRRWANLKQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQREDGGRS 60
           MERANR RRW NL+QRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQ EDGGRS
Sbjct: 1   MERANRRRRWTNLRQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQGEDGGRS 60

Query: 61  SAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEEMDGGDWKTKRKEGENNGDWM 120
           SAASGMNLAMALAAERNLR+DEGGPTG SDVKSLMRLFEEMDGGDWKTKRKE ENNGDWM
Sbjct: 61  SAASGMNLAMALAAERNLRNDEGGPTGGSDVKSLMRLFEEMDGGDWKTKRKESENNGDWM 120

Query: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 170
           CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF
Sbjct: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 169

[Close]

BLAST of MELO3C014436.1 vs. ExPASy TrEMBL
Match: A0A6J1HXI8 (RNA-binding protein MEX3B-like OS=Cucurbita maxima OX=3661 GN=LOC111468383 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 8.7e-85
Identity = 155/169 (91.72%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 1   MERANRGRRWANLKQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQREDGGRS 60
           MER N GRRWANLKQRLGLKGMGCC GSWSPTSSTLTMIEG SLS HGSSRS REDG RS
Sbjct: 1   MERQNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARS 60

Query: 61  SAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEEMDGGDWKTKRKEGENNGDWM 120
           SA+SG+NLAMALAAERNLR+DEGGPTGA DVKSLMRLFEEMDGGDWKTKRKE EN GDWM
Sbjct: 61  SASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEEMDGGDWKTKRKESENTGDWM 120

Query: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 170
           CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPIC+RSIIEILDIF
Sbjct: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF 169

[Close]

BLAST of MELO3C014436.1 vs. ExPASy TrEMBL
Match: A0A6J1GME5 (RNA-binding protein MEX3B-like OS=Cucurbita moschata OX=3662 GN=LOC111455597 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 8.7e-85
Identity = 155/169 (91.72%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 1   MERANRGRRWANLKQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQREDGGRS 60
           MER N GRRWANLKQRLGLKGMGCC GSWSPTSSTLTMIEG SLS HGSSRS REDG RS
Sbjct: 1   MERQNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARS 60

Query: 61  SAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEEMDGGDWKTKRKEGENNGDWM 120
           SA+SG+NLAMALAAERNLR+DEGGPTGA DVKSLMRLFEEMDGGDWKTKRKE EN GDWM
Sbjct: 61  SASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEEMDGGDWKTKRKESENTGDWM 120

Query: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 170
           CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPIC+RSIIEILDIF
Sbjct: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF 169

[Close]

BLAST of MELO3C014436.1 vs. ExPASy TrEMBL
Match: A0A6J1EWQ9 (uncharacterized protein LOC111437226 OS=Cucurbita moschata OX=3662 GN=LOC111437226 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.6e-73
Identity = 143/170 (84.12%), Postives = 154/170 (90.59%), Query Frame = 0


Query: 1   MERANRGRRWANLKQRLGL-KGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQREDGGR 60
           MER NRG+RWANLKQRLGL KG+GCC GSWS TSSTLTMI+G  LS HGSSRS R+DG R
Sbjct: 62  MERPNRGQRWANLKQRLGLMKGIGCCGGSWSSTSSTLTMIDGIGLSRHGSSRSHRDDGTR 121

Query: 61  SSAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEEMDGGDWKTKRKEGENNGDW 120
           SSAASGMNLAMALAAERNL ++EGGPT   +VKSL+RLFEE+DGGDWKT+RKE ENNGDW
Sbjct: 122 SSAASGMNLAMALAAERNL-TEEGGPT-VGNVKSLVRLFEEIDGGDWKTRRKESENNGDW 181

Query: 121 MCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 170
           +CCVCMERSKGAAFIPCGHTFCRVCSREL LN GTCPICSRSIIEILDIF
Sbjct: 182 LCCVCMERSKGAAFIPCGHTFCRVCSRELRLNGGTCPICSRSIIEILDIF 229

[Close]

BLAST of MELO3C014436.1 vs. TAIR 10
Match: AT4G03965.1 (RING/U-box superfamily protein )

HSP 1 Score: 132.1 bits (331), Expect = 4.2e-31
Identity = 85/185 (45.95%), Postives = 111/185 (60.00%), Query Frame = 0


Query: 1   MERANRGRRWANLKQRLGLKGMGCCRGSWSPTSSTLT---MIEGFSLSLHGSSRSQREDG 60
           ++R+ R +R   LK+RLG K +GCC  +W    ++ T     E F   L   S     D 
Sbjct: 32  LDRSRRRKR--TLKERLGFKRIGCCGPTWGLRLTSNTGEDDDEPFENRLVSGS-----DH 91

Query: 61  GRSSAASGMNLAMALAAERNLRSDEGGPTGA-SDVK-SLMRLFEE------MDGGDWKTK 120
                  GMNLA ALAAERN R++E   +G+ + +K SLMRL EE      ++  + +  
Sbjct: 92  VTGPLNQGMNLATALAAERNYRTEETEASGSLTPLKVSLMRLLEETAERVVVEENETERV 151

Query: 121 RKEGEN-----NGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIE 170
                +     N D +CCVCM R KGAAFIPCGHTFCRVCSRE+WLNRG+CP+C+R IIE
Sbjct: 152 TASASSTVRGVNNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREVWLNRGSCPLCNRPIIE 209

[Close]

BLAST of MELO3C014436.1 vs. TAIR 10
Match: AT4G22250.1 (RING/U-box superfamily protein )

HSP 1 Score: 125.6 bits (314), Expect = 3.9e-29
Identity = 82/177 (46.33%), Postives = 95/177 (53.67%), Query Frame = 0


Query: 8   RRWANLKQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQREDG----GRSSAA 67
           RR   LK+RL  K +GCC  +W+   +  T +   +         Q E G        + 
Sbjct: 38  RRKRTLKERLRFKCIGCCGPTWNLRLTNNTTLHSPTSRDDEIEELQIETGLVLESDHGSG 97

Query: 68  SGMNLAMALAAERNLR--SDEGGPTGASDVKSLMRLFEEMDGGDWKTKRKEGE------- 127
           +GMNLA AL AER  R  S E          SLMRL EE          KE E       
Sbjct: 98  TGMNLATALEAERYNRGESTEAEADMTPRRVSLMRLLEETAEKIVDDDGKETEILTASIG 157

Query: 128 --NNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 170
                D +CCVCM R KGAAFIPCGHTFCRVCSRELWLNRG+CP+C+R IIEILDIF
Sbjct: 158 TLTGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 214

[Close]

BLAST of MELO3C014436.1 vs. TAIR 10
Match: AT1G62370.1 (RING/U-box superfamily protein )

HSP 1 Score: 112.1 bits (279), Expect = 4.5e-25
Identity = 73/174 (41.95%), Postives = 91/174 (52.30%), Query Frame = 0


Query: 9   RWANLKQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQRE-------DGGRS- 68
           +W  LKQRL    +GCC     P +  L   E   +        + +       D G   
Sbjct: 40  KWTTLKQRLRFDWVGCC---GKPLTLRLRQAETPIVVDDDDDEEESQNQVVDFSDPGTGT 99

Query: 69  -----SAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEEMDGGDWKTKRKEGEN 128
                +  S  NLA ALA ER     E   T  + V  LMRL  E DG D  T       
Sbjct: 100 ELDCLTRGSTRNLAEALAEERLAHVTE-EETAVTKV-PLMRLLAESDGCDSTTTWL---- 159

Query: 129 NGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 170
             D +CCVCM R KGAAFIPCGHT+CRVCSRE+W+NRGTCP+C+RSI ++LD++
Sbjct: 160 GNDPLCCVCMGREKGAAFIPCGHTYCRVCSREIWMNRGTCPLCNRSIFDVLDLY 204

[Close]

BLAST of MELO3C014436.1 vs. TAIR 10
Match: AT3G25030.1 (RING/U-box superfamily protein )

HSP 1 Score: 104.0 bits (258), Expect = 1.2e-22
Identity = 75/193 (38.86%), Postives = 100/193 (51.81%), Query Frame = 0


Query: 1   MERANRGRR----WANLKQRLGLKGMGCCRGSWSPTSSTLTMIE---------GFSLSLH 60
           M+R +R  R    W +L+++L LK  G    S +   S  T I          GF LS  
Sbjct: 63  MQREHRHSRDKTAWKSLREKLRLKRNGSVWISSNSIPSLDTPIPNRDNVSHQLGFLLSNS 122

Query: 61  GSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVK----SLMRLFEEMDG 120
           G+   +      SS    + L   LA ER L + E       +V+    SLM L EE +G
Sbjct: 123 GNVTEE-----ASSVEGRIRLGAVLAEERALSAREEETPAEREVEPARMSLMELLEENEG 182

Query: 121 G-DWKTKRKEGENN------GDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCP 170
              + +   E E         +  CCVCM RSKGAAFIPCGHTFCR+CSRELW+ RG CP
Sbjct: 183 QMSFVSVDGEAEEEVAAVTAAEISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCP 242

[Close]

BLAST of MELO3C014436.1 vs. TAIR 10
Match: AT3G25030.2 (RING/U-box superfamily protein )

HSP 1 Score: 104.0 bits (258), Expect = 1.2e-22
Identity = 75/193 (38.86%), Postives = 100/193 (51.81%), Query Frame = 0


Query: 1   MERANRGRR----WANLKQRLGLKGMGCCRGSWSPTSSTLTMIE---------GFSLSLH 60
           M+R +R  R    W +L+++L LK  G    S +   S  T I          GF LS  
Sbjct: 63  MQREHRHSRDKTAWKSLREKLRLKRNGSVWISSNSIPSLDTPIPNRDNVSHQLGFLLSNS 122

Query: 61  GSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVK----SLMRLFEEMDG 120
           G+   +      SS    + L   LA ER L + E       +V+    SLM L EE +G
Sbjct: 123 GNVTEE-----ASSVEGRIRLGAVLAEERALSAREEETPAEREVEPARMSLMELLEENEG 182

Query: 121 G-DWKTKRKEGENN------GDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCP 170
              + +   E E         +  CCVCM RSKGAAFIPCGHTFCR+CSRELW+ RG CP
Sbjct: 183 QMSFVSVDGEAEEEVAAVTAAEISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCP 242

The following BLAST results are available for this feature:

BLAST of MELO3C014436.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061653.1	1.0e-92	100.00	zf-C3HC4_3 domain-containing protein [Cucumis melo var. makuwa] >TYK05853.1 zf-C...	[more]
KGN47968.1	1.2e-88	95.86	hypothetical protein Csa_002927 [Cucumis sativus]	[more]
XP_022953088.1	1.8e-84	91.72	RNA-binding protein MEX3B-like [Cucurbita moschata] >XP_022953089.1 RNA-binding ...	[more]
XP_023531397.1	1.5e-75	85.88	uncharacterized protein LOC111793648 [Cucurbita pepo subsp. pepo] >XP_023531398....	[more]
KAG6589274.1	1.5e-75	85.88	hypothetical protein SDJN03_17839, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MELO3C014436.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O35445	1.9e-04	33.33	E3 ubiquitin-protein ligase RNF5 OS=Mus musculus OX=10090 GN=Rnf5 PE=1 SV=1	[more]
Q5M807	1.9e-04	33.33	E3 ubiquitin-protein ligase RNF5 OS=Rattus norvegicus OX=10116 GN=Rnf5 PE=2 SV=1	[more]
B3H754	3.2e-04	31.37	E3 ubiquitin-protein ligase APD3 OS=Arabidopsis thaliana OX=3702 GN=APD3 PE=2 SV...	[more]
Q99942	3.2e-04	33.33	E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens OX=9606 GN=RNF5 PE=1 SV=1	[more]
P43254	4.2e-04	32.81	E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV...	[more]

BLAST of MELO3C014436.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V0I3	5.1e-93	100.00	Zf-C3HC4_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A0A0KEL6	5.8e-89	95.86	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G421620 P...	[more]
A0A6J1HXI8	8.7e-85	91.72	RNA-binding protein MEX3B-like OS=Cucurbita maxima OX=3661 GN=LOC111468383 PE=4 ...	[more]
A0A6J1GME5	8.7e-85	91.72	RNA-binding protein MEX3B-like OS=Cucurbita moschata OX=3662 GN=LOC111455597 PE=...	[more]
A0A6J1EWQ9	2.6e-73	84.12	uncharacterized protein LOC111437226 OS=Cucurbita moschata OX=3662 GN=LOC1114372...	[more]

BLAST of MELO3C014436.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03965.1	4.2e-31	45.95	RING/U-box superfamily protein	[more]
AT4G22250.1	3.9e-29	46.33	RING/U-box superfamily protein	[more]
AT1G62370.1	4.5e-25	41.95	RING/U-box superfamily protein	[more]
AT3G25030.1	1.2e-22	38.86	RING/U-box superfamily protein	[more]
AT3G25030.2	1.2e-22	38.86	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 121..158 e-value: 4.9E-7 score: 39.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 121..159 score: 11.205767
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 99..169 e-value: 3.2E-14 score: 54.1
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 120..164 e-value: 2.6E-12 score: 46.4
None	No IPR available	PANTHER	PTHR46629	OS01G0917900 PROTEIN	coord: 1..169
None	No IPR available	PANTHER	PTHR46629:SF18	LIGASE, PUTATIVE-RELATED	coord: 1..169
None	No IPR available	CDD	cd16449	RING-HC	coord: 121..158 e-value: 1.00238E-8 score: 47.0769
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 112..166

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C014436	MELO3C014436	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C014436.1:exon:130649	MELO3C014436.1:exon:130649	exon
MELO3C014436.1:exon:130648	MELO3C014436.1:exon:130648	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C014436.1:three_prime_utr	MELO3C014436.1:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C014436.1:cds	MELO3C014436.1:cds	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C014436.1:five_prime_utr	MELO3C014436.1:five_prime_utr	five_prime_UTR
MELO3C014436.1:five_prime_utr	MELO3C014436.1:five_prime_utr_2	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C014436.1	MELO3C014436.1-protein	polypeptide