MELO3C014400.jh1.t3 (mRNA) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDSstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.TGACTCGCTTCTTCAGGAACGAGTTGCCAAGTCTTCCAATCTGGATCCTTCCATGTCTGACCAATTCCTGGTGAGTGATTTCTTCCTTCTTTTTTTTTTTTTTAAGCTCATTTCCTTTACCATTGAAAATGAAATTCATGGGTTTGTTGAAATTTTTTAGGGAAAATCGGAAAGGGCGAAGAGGTTGAAGCAAGATTCGTTGCTTTTGCTTAGAGGTTTTGACTCTCTTGGCTATACTCTGTCTCAGCTTTCCAACAATTTGGATAACGCCTTGCAGGTAACTACGACTCACACTTCTTCTATTTTCTGTGTTCTTTCTAGAAAACTTGCATTTTTTAATTCAAAATTAGTGTTAAAATGCCTTAAATCTATTATTTCACGTTTGGAATGGGTGGGCTAGAGGCGACTTCCCTATTGCGGTCAGGAGGCAACATTCTGGAACTTAAGTTGTGTTCGTTATGATTAGGTTATTTACGATTTTGATGACACGGTTTACGGGAGTTCGCTATATAGACACTACGGCATGAATTATTCTTCTCCTCAAGGATGTAATAAGTACATTGCTAATGAAGAACCACGTCCTTTCTCTTTTATGTCCATCTTTAATTGTCAATTCTTATTAACAAGAATGTTATTAAATGTTGCTCTTGAAATGAAACCGTCAAACAAAGATTTGATTTTTTGAGGACTGAACTCAGGGTGCTAGGGATTTGGTCAAAGCACCAACTTTGACGGAGATCTTCCAGAACAACCTCAAGAATTCAGAGGTTGAGGAAGATGATTCCAGAGGGAAAGAAAATGAGTTGGTGGAGCCCAAGCAAGCAACAAAGAGGAAATTTGATGACAGTCATTGCTCAGAAGAATCAGATGTTAATTTAGAGAAAGAAAACCAGCAAAACCATAAAGACAAGCTTAAAAAGGCCAAGAATGTTGGTTCTCTACTACTCTTATCCTTCAATCTATCTTTGAATGTATATATCAGTAGCCAACACAAGAAGTTCTTATGCAATATTAACATTTTGGCCTGTTTTTTTCCAGCTTGCAGTTGCAATGGCAACAAAATCAGCATTTCTAGCAAGAGAATTAAAATCATTAAAATCCAACTTATGTTTTATGCAAGAGCGATGTTCCGTACTTGAGGAAGAGAATAGGAGACTTCGAGACGGATTCTCCAGAGGAGTCAGACCAGAAGAAGATGATCTGGTTTGTATCAACAGTTCCTTTTTTTTTTTTTTCATGGGCACCTTATAACAATTAATGACACGCCCCCTACAAGCATGTGAAATTTATATTCTGCCTATAAGTACACTACCACATTTTACATAGTATCTCTCTGGAGACGTTCATGTCGTGGCTTCGCCATGAAGACCGTAATAAACATGGCCATGCATTATGGCTACGTACATAATCATCCCTAGTGCAATACTCTAAATTGTGGTGGTGCGTTTTATGAAGAATGTTAGATTTCATTTGTTTACCGGGTCATTAATCATTTGGGAGACTGAGAATTGAGTCATCCCTATAGAAATCTCTCCATATCAATCTTATGATGAATATTTTTTGTTGTTCTTCGTTCCCACTTCTGTAAATTAGGTGATGTTTATGCATAGTCTGTTTGTTGGTAAATCAGGTTAGACTTCAAATGGAAGCACTACTTGCTGAGAAATCCAGATTAGCAAACGAAAATGCAAACTTAACAAGGGAAAATCAATGCCTTCATCAGCTTGTAGAGTATCATCAGCTCACATCCCAAGATCTTTCTTTCTCATATGAGGAAGTAATTCAAGGCATGTGCTTGGACTTCTCGTCACCACCCCCAGCCATTGCTGAAGGAGATGAAGAAGAACAAGAACAGAGTGACAAAGAAATCATTCAAACACCTAAAGCTGATCTTTTTAGCTTTTCTACTTCTCTTGATGAGGTCCACCAAGAAAAGTAGAGGTGTGATATTAGGCCAGAAGATGCAGTTTCACTCTTCGGGTGATCTCATTTAGTTTCCTGTAACCTTGATCTTCAACTGCATTTAGTTCAGAAATAAATATAGCATTTTCTGCACATTGAATCTGTTTACTTCATCAAACCAAAGCTTCAAGCTCTTGACTTTTGCAAAGGTGTATGACGTGACTATAATCCCTCTACCCTTCCCACGTCAAACCAGGTTGAGCTTTAGTCAGAGTTGAACTCAAGAGCTTATTTTCGAACTAGCTCGGGTTTGTTGTTTTACGTTGAGGGAACAGAAAGAATTTTGTTTCAACTCTTGGAAGAAAAGAACTT TGACTCGCTTCTTCAGGAACGAGTTGCCAAGTCTTCCAATCTGGATCCTTCCATGTCTGACCAATTCCTGGGAAAATCGGAAAGGGCGAAGAGGTTGAAGCAAGATTCGTTGCTTTTGCTTAGAGGTTTTGACTCTCTTGGCTATACTCTGTCTCAGCTTTCCAACAATTTGGATAACGCCTTGCAGGGTGCTAGGGATTTGGTCAAAGCACCAACTTTGACGGAGATCTTCCAGAACAACCTCAAGAATTCAGAGGTTGAGGAAGATGATTCCAGAGGGAAAGAAAATGAGTTGGTGGAGCCCAAGCAAGCAACAAAGAGGAAATTTGATGACAGTCATTGCTCAGAAGAATCAGATGTTAATTTAGAGAAAGAAAACCAGCAAAACCATAAAGACAAGCTTAAAAAGGCCAAGAATCTTGCAGTTGCAATGGCAACAAAATCAGCATTTCTAGCAAGAGAATTAAAATCATTAAAATCCAACTTATGTTTTATGCAAGAGCGATGTTCCGTACTTGAGGAAGAGAATAGGAGACTTCGAGACGGATTCTCCAGAGGAGTCAGACCAGAAGAAGATGATCTGGTTAGACTTCAAATGGAAGCACTACTTGCTGAGAAATCCAGATTAGCAAACGAAAATGCAAACTTAACAAGGGAAAATCAATGCCTTCATCAGCTTGTAGAGTATCATCAGCTCACATCCCAAGATCTTTCTTTCTCATATGAGGAAGTAATTCAAGGCATGTGCTTGGACTTCTCGTCACCACCCCCAGCCATTGCTGAAGGAGATGAAGAAGAACAAGAACAGAGTGACAAAGAAATCATTCAAACACCTAAAGCTGATCTTTTTAGCTTTTCTACTTCTCTTGATGAGGTCCACCAAGAAAAGTAGAGGTGTGATATTAGGCCAGAAGATGCAGTTTCACTCTTCGGGTGATCTCATTTAGTTTCCTGTAACCTTGATCTTCAACTGCATTTAGTTCAGAAATAAATATAGCATTTTCTGCACATTGAATCTGTTTACTTCATCAAACCAAAGCTTCAAGCTCTTGACTTTTGCAAAGGTGTATGACGTGACTATAATCCCTCTACCCTTCCCACGTCAAACCAGGTTGAGCTTTAGTCAGAGTTGAACTCAAGAGCTTATTTTCGAACTAGCTCGGGTTTGTTGTTTTACGTTGAGGGAACAGAAAGAATTTTGTTTCAACTCTTGGAAGAAAAGAACTT ATGTCTGACCAATTCCTGGGAAAATCGGAAAGGGCGAAGAGGTTGAAGCAAGATTCGTTGCTTTTGCTTAGAGGTTTTGACTCTCTTGGCTATACTCTGTCTCAGCTTTCCAACAATTTGGATAACGCCTTGCAGGGTGCTAGGGATTTGGTCAAAGCACCAACTTTGACGGAGATCTTCCAGAACAACCTCAAGAATTCAGAGGTTGAGGAAGATGATTCCAGAGGGAAAGAAAATGAGTTGGTGGAGCCCAAGCAAGCAACAAAGAGGAAATTTGATGACAGTCATTGCTCAGAAGAATCAGATGTTAATTTAGAGAAAGAAAACCAGCAAAACCATAAAGACAAGCTTAAAAAGGCCAAGAATCTTGCAGTTGCAATGGCAACAAAATCAGCATTTCTAGCAAGAGAATTAAAATCATTAAAATCCAACTTATGTTTTATGCAAGAGCGATGTTCCGTACTTGAGGAAGAGAATAGGAGACTTCGAGACGGATTCTCCAGAGGAGTCAGACCAGAAGAAGATGATCTGGTTAGACTTCAAATGGAAGCACTACTTGCTGAGAAATCCAGATTAGCAAACGAAAATGCAAACTTAACAAGGGAAAATCAATGCCTTCATCAGCTTGTAGAGTATCATCAGCTCACATCCCAAGATCTTTCTTTCTCATATGAGGAAGTAATTCAAGGCATGTGCTTGGACTTCTCGTCACCACCCCCAGCCATTGCTGAAGGAGATGAAGAAGAACAAGAACAGAGTGACAAAGAAATCATTCAAACACCTAAAGCTGATCTTTTTAGCTTTTCTACTTCTCTTGATGAGGTCCACCAAGAAAAGTAG MSDQFLGKSERAKRLKQDSLLLLRGFDSLGYTLSQLSNNLDNALQGARDLVKAPTLTEIFQNNLKNSEVEEDDSRGKENELVEPKQATKRKFDDSHCSEESDVNLEKENQQNHKDKLKKAKNLAVAMATKSAFLARELKSLKSNLCFMQERCSVLEEENRRLRDGFSRGVRPEEDDLVRLQMEALLAEKSRLANENANLTRENQCLHQLVEYHQLTSQDLSFSYEEVIQGMCLDFSSPPPAIAEGDEEEQEQSDKEIIQTPKADLFSFSTSLDEVHQEK Homology
BLAST of MELO3C014400.jh1.t3 vs. NCBI nr
Match: XP_008449444.1 (PREDICTED: uncharacterized protein LOC103491329 [Cucumis melo] >KAA0057310.1 uncharacterized protein E6C27_scaffold280G001550 [Cucumis melo var. makuwa] >TYK13425.1 uncharacterized protein E5676_scaffold496G00440 [Cucumis melo var. makuwa]) HSP 1 Score: 527 bits (1357), Expect = 2.83e-187 Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0
BLAST of MELO3C014400.jh1.t3 vs. NCBI nr
Match: XP_004140094.1 (uncharacterized protein LOC101222797 [Cucumis sativus] >KGN47900.1 hypothetical protein Csa_003798 [Cucumis sativus]) HSP 1 Score: 508 bits (1308), Expect = 8.86e-180 Identity = 268/279 (96.06%), Postives = 274/279 (98.21%), Query Frame = 0
BLAST of MELO3C014400.jh1.t3 vs. NCBI nr
Match: XP_038887510.1 (uncharacterized protein LOC120077631 [Benincasa hispida]) HSP 1 Score: 484 bits (1245), Expect = 4.47e-170 Identity = 257/282 (91.13%), Postives = 271/282 (96.10%), Query Frame = 0
BLAST of MELO3C014400.jh1.t3 vs. NCBI nr
Match: XP_038887547.1 (uncharacterized protein LOC120077665 [Benincasa hispida]) HSP 1 Score: 480 bits (1236), Expect = 1.05e-168 Identity = 256/282 (90.78%), Postives = 270/282 (95.74%), Query Frame = 0
BLAST of MELO3C014400.jh1.t3 vs. NCBI nr
Match: XP_023532923.1 (uncharacterized protein LOC111794945 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 436 bits (1122), Expect = 2.58e-152 Identity = 237/280 (84.64%), Postives = 255/280 (91.07%), Query Frame = 0
BLAST of MELO3C014400.jh1.t3 vs. ExPASy TrEMBL
Match: A0A5D3CP73 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00440 PE=4 SV=1) HSP 1 Score: 527 bits (1357), Expect = 1.37e-187 Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0
BLAST of MELO3C014400.jh1.t3 vs. ExPASy TrEMBL
Match: A0A1S3BM20 (uncharacterized protein LOC103491329 OS=Cucumis melo OX=3656 GN=LOC103491329 PE=4 SV=1) HSP 1 Score: 527 bits (1357), Expect = 1.37e-187 Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0
BLAST of MELO3C014400.jh1.t3 vs. ExPASy TrEMBL
Match: A0A0A0KDW3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G410060 PE=4 SV=1) HSP 1 Score: 508 bits (1308), Expect = 4.29e-180 Identity = 268/279 (96.06%), Postives = 274/279 (98.21%), Query Frame = 0
BLAST of MELO3C014400.jh1.t3 vs. ExPASy TrEMBL
Match: A0A6J1K534 (uncharacterized protein LOC111491263 OS=Cucurbita maxima OX=3661 GN=LOC111491263 PE=4 SV=1) HSP 1 Score: 436 bits (1121), Expect = 1.40e-151 Identity = 234/272 (86.03%), Postives = 250/272 (91.91%), Query Frame = 0
BLAST of MELO3C014400.jh1.t3 vs. ExPASy TrEMBL
Match: A0A6J1DND5 (uncharacterized protein LOC111022690 OS=Momordica charantia OX=3673 GN=LOC111022690 PE=4 SV=1) HSP 1 Score: 431 bits (1107), Expect = 1.96e-149 Identity = 234/277 (84.48%), Postives = 252/277 (90.97%), Query Frame = 0
BLAST of MELO3C014400.jh1.t3 vs. TAIR 10
Match: AT4G02800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01970.1); Has 3209 Blast hits to 2720 proteins in 308 species: Archae - 13; Bacteria - 213; Metazoa - 1207; Fungi - 247; Plants - 183; Viruses - 21; Other Eukaryotes - 1325 (source: NCBI BLink). ) HSP 1 Score: 268.1 bits (684), Expect = 8.0e-72 Identity = 144/250 (57.60%), Postives = 191/250 (76.40%), Query Frame = 0
BLAST of MELO3C014400.jh1.t3 vs. TAIR 10
Match: AT5G01970.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30050.1); Has 240 Blast hits to 236 proteins in 72 species: Archae - 0; Bacteria - 15; Metazoa - 51; Fungi - 19; Plants - 119; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). ) HSP 1 Score: 118.6 bits (296), Expect = 7.9e-27 Identity = 82/218 (37.61%), Postives = 127/218 (58.26%), Query Frame = 0
BLAST of MELO3C014400.jh1.t3 vs. TAIR 10
Match: AT1G30050.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01970.1); Has 246 Blast hits to 244 proteins in 61 species: Archae - 0; Bacteria - 8; Metazoa - 78; Fungi - 10; Plants - 117; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). ) HSP 1 Score: 110.2 bits (274), Expect = 2.8e-24 Identity = 65/134 (48.51%), Postives = 94/134 (70.15%), Query Frame = 0
BLAST of MELO3C014400.jh1.t3 vs. TAIR 10
Match: AT2G30530.1 (unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01970.1); Has 5513 Blast hits to 872 proteins in 154 species: Archae - 0; Bacteria - 30; Metazoa - 615; Fungi - 144; Plants - 149; Viruses - 12; Other Eukaryotes - 4563 (source: NCBI BLink). ) HSP 1 Score: 104.4 bits (259), Expect = 1.5e-22 Identity = 73/172 (42.44%), Postives = 106/172 (61.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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