MELO3C011425.1 (mRNA) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATCCGCCAAGCAGAGTCTACAGAACTCCACTATTTTGATTCAGTTTTCTCCACATCGATACCCCGCCATGGATCGTAATCAGCCGCTGCAACCGCCATCTCCGCAGCCTCGTCCTCCAGAATCCGGTGGGAGTTCCTCATCCATACTTATAGTTTTCGCCTCCTTCCTGGCCATCTTTTCCATGGTATATCTTATTCATTCCTTCTCGAACTGCAAAACACGCTAGGTTTCGTGTTTTTGTTTCTGAAATTTCATTTTGATTTTGTTACGCCATAGACTCCGACAGTTGATTTTTGATACACTGCCTTATTTCTATCTGAGGTCGAAGTATTTTGTCTGAACTAGATGCGTTGATTTTTCGTCTATGTTTTCTCCGTTGCGAAATGGAGTTGGAATGCTAATACATTCGAGTTTTACGTTGTTTGTTTTGGTAGTTAATTTGTTGGTTTGATGTATTAAAGAACGCGTTTTTTTGATTTATAATAAGTTCAAGTCATATCCAGTGCCATATGTGGGAGTTACAAAGACGTTACCCAATTGATTAAAATAGATATGCAGTGTGTTACAGAAGTTTGTGATTAGTGCCATCGATGGAAACATCAAGCGTATGAGTATGAGATTCGCAAAATTCAATGATGTACTGTCAAAAAATGAAGAAAAAAGTTTCTATCTAGTTTCTATACAGAGTAGTCTTGTGAATCTCTGATCTTCTTGTAGTTAGTTCGGCCATGGACTTTAAATGTGGAGTCTGACACAGTTGAGAAATTTTGGCCAAATTTTGTCGTATAAGAAAAAAGGTTCAACAAATTGAAGCAGACAGTGGACGCTTTATGTAAACCTGATAAATTCTAGGTTTCACACATAGCAGGTCTGCTAAGTTTAATATATAAAGAAGATTTTGGATCAGGATTAGTTTTCGTAGGATAATCAACCAAGTGAGAGCACAATTGACTATTGGATCAGTACTCGTTGTCCAAAAATTGATGAACATACATAAAACCTGGTCAAGAAGTTGTATCACCTTATAAATGTTTATTTGGCATTCCCATTTTTTGAGCCTTAAGTGTGTACAATAAACAATTATAAAATCACTGTAACTTATCTGGTTGATTCTACTGGCTGTATAACTGTATTACATACATGTAGGTGGTCTTTCCATCTCAATCAAACTTGTCAAGTAATCTTTCTATTTTACATCAAGTACCGGAGGGTCATGTGGGGGTATATTGGAGAGGAGGTGCCCTTCTGAAGACAATAACTGATCCAGGTCTAAGTCTCTCCTTACTACCTTTTTTTATTGTTATGCGTATCGTATGTCCTTTTTTTTCATGTTAAAAATTTCAGGTTTCCATCTGAAGTTGCCACTGATAACCCAGTTTGTGCCTGTTCAAGTGACCCTCCAAACCGATCAAGTAAGTTAGAATTTAATACCGATTTTAGGATTTCAATATTTTGAAGATGTTCTAATTGATGCTCACATCCAGGTAAAGGACATTCCATGTGGTACTAAGGGGGGTGTGATGATCAACTTCGAGAAGATAGAGGTGCAATTACTAGGAAATTCCTTTGCAATAATTGATGTTAGATTTTCTTGTTTTTCATCTTAGTTGATAAGGATGCTACTTTCAGGTTGTCAATCGCCTCCGCAAAGAATATGTGTATGACACCCTGGTCAACTATGGTGTGAATTATGATAACATATGGATATATGATAAAATTCATCATGAGATCAATCAGTTTTGTAGCTCCCACAGTCTTCAACAAGTTTATATTGATGTCTTTGATCAGGTGTGTGCTTTTAAAGCCTTGCACGTTTTATTTTCACAAATGGCTTGCAGAGCTGATAAGAGCACCGTGCGAAGTGTGAACTCTAGCTATTGAAATTGTGCACCTCAAGTATTTTGGCAACTTACTGCCTTATTTGTATTCATCTGTACCGGATATTTATCTTTTCTTCAGCTTTGCATTCTTTCAAGGAATCCATTTAAGGCTGTAAAAGTTTGTTTCCATGAAATTTCTCGTAGATACTTTCTTGGTTGGTATCAAGCGTTTCTTTAGTATGAATGATCCGTGACTGCTTTTTATGTGTAGATCGATGAAAAGATGAAAGATGCCCTCCAAGGTGACTGTACACGTTATGCTCCTGGTATTGAAATAATCAGTGTTCGTGTAACCAAACCTACCATCCCAAATTCTATCAGAAAGAACTTTGAAGACATGGAAGTGGAACGTACAAAGGTGCATCTCTAACATGGGAAACCAACTTTATTCTTGCTTTGTTTGGGTTTCAAACAAGGTATAAATCAGACTCACAAAGGCTAGTGGTGAAAGTATGCCTTGTTAGAGTATCGTTGGTTAATTTAGTCTTACACGTCATAATAATTCAAAATCGAGTTTACCCTTTTAATTAAAAAAAATTAGCATGAATACCTGTGTAGGTGTGTTTTAGGTCCACAATATTCATACGAATAACGTTTTGAACCAAAGTTCATCAGATGACTCTTAGAGCTTTAGAAACCTAGAAACCCAAAGCCCGTTATTTTTAGGCTTCTTCTTAACGTTTTGGACCAAAGTTCGTCCAAACTTGCACCACCTTTTAGTGCTTTATGCAGCTAGAAACCTAAAGTTCATCCTTTCAAGAGTTCTTTTTTTTTTTATTATTATTATTATTTTCTCAATAAAATACATATTTCTGCTTGTATTTATTCTAATGCTATGCAATCTTGGCATACTTGGATAGGTTCTAATTGCCGTAGAGAGACAAAGGGTAGTAGAGAAAGAAGCAGAAACCAATAAAAAAATGGCAATTAGCGAAGCCGAGAAGAATGCTAATGTTAGCAGGATCCTCATGGAACAGAAATTGATGGAGAAGGAGAGTTCCAGGAGACAACAAGAAATTGATAACCACATCTATCTTGCTCGTGAAAAGAGTCTCGCGGATGCCAATTATTACCGGTACTTCTCTCATTTTGCTTTTCAAAATGAGAAATGAATGCCAGTTGCACTGAAACCGAATACCTAATGACATAAATGTCCTCTCATCTTCCTTCTTCTCAGGGTACTAAAAGAAGCTGAAGCCAACAAGTTGAAGCTTACACCCCAGTTTCTTGAGCTAAAATTTATCGAGGCCATTGCTGATAATACAAAGATTTTCTTCGGGGACAAGGCACGTTCTGTTTTCTTGCTTATACTGTTATACATCATATGCATTAGATGCCTATGACTTAACTCAGTAGCTTTGCTTCTTCTAGGTTCCAAACATGATTTTCGATCAGAGGTTGCTCGGAAACTTCCTGCATCAGGTGGCGGAAAATGAATCAAGAAAAGCCTCAGGGGAGGCAGATTTAGAAATGTAATCCAAGATTTATCTTCTAATGGTCAGGTATATTCGAATCTCTCCTCCTTTTCTCAACATTATTTTTGGACGTTGACTAATAAGTTCAAAGTCAAGACTTTGGAAGAATTCTTTTCCTCGTGCATATCGGAAGCCAGAATCACTTCTTTCTTTAAATTTTCAAGGAAATCTGTTTACACTGACATCTTAATATAATTTAGGTATTTTGGTCATTTACTTGGAATTTAATCTTTCGAAGTTAATTTTCTTTAAAATTGGTTGAATAATATTAAGGCCCATGAATTTTGTTATATTTGCAAATTTTTCTTGATGGTAAGTGAATAATTAAACCTTGGTGCTTCATCAATGTTCACTTTACCCACAAATTTCTTTACCAGAAAACAATGGCGTCGGATGGTGATCTCCTTTTTCATGTTATACCAGATAACGTTTCAATGGGAAGCAATTTTCGTGATGCATCATTTGACAAACTCAAGTAAATACCTCCATTGAGATTTTCTTTTCTTGTTTAGCACACAAGTCTGTTTCACAAATTTTGAGTACTTACCAATAAACGTGATTTGAACTTGCATCGAATAAATTAATTTTAATAAATTTTGAGAGTAATGACGTGAACT AATCCGCCAAGCAGAGTCTACAGAACTCCACTATTTTGATTCAGTTTTCTCCACATCGATACCCCGCCATGGATCGTAATCAGCCGCTGCAACCGCCATCTCCGCAGCCTCGTCCTCCAGAATCCGGTGGGAGTTCCTCATCCATACTTATAGTTTTCGCCTCCTTCCTGGCCATCTTTTCCATGGTGGTCTTTCCATCTCAATCAAACTTGTCAAGTAATCTTTCTATTTTACATCAAGTACCGGAGGGTCATGTGGGGGTATATTGGAGAGGAGGTGCCCTTCTGAAGACAATAACTGATCCAGGTTTCCATCTGAAGTTGCCACTGATAACCCAGTTTGTGCCTGTTCAAGTGACCCTCCAAACCGATCAAGTAAAGGACATTCCATGTGGTACTAAGGGGGGTGTGATGATCAACTTCGAGAAGATAGAGGTTGTCAATCGCCTCCGCAAAGAATATGTGTATGACACCCTGGTCAACTATGGTGTGAATTATGATAACATATGGATATATGATAAAATTCATCATGAGATCAATCAGTTTTGTAGCTCCCACAGTCTTCAACAAGTTTATATTGATGTCTTTGATCAGATCGATGAAAAGATGAAAGATGCCCTCCAAGGTGACTGTACACGTTATGCTCCTGGTATTGAAATAATCAGTGTTCGTGTAACCAAACCTACCATCCCAAATTCTATCAGAAAGAACTTTGAAGACATGGAAGTGGAACGTACAAAGGTTCTAATTGCCGTAGAGAGACAAAGGGTAGTAGAGAAAGAAGCAGAAACCAATAAAAAAATGGCAATTAGCGAAGCCGAGAAGAATGCTAATGTTAGCAGGATCCTCATGGAACAGAAATTGATGGAGAAGGAGAGTTCCAGGAGACAACAAGAAATTGATAACCACATCTATCTTGCTCGTGAAAAGAGTCTCGCGGATGCCAATTATTACCGGGTACTAAAAGAAGCTGAAGCCAACAAGTTGAAGCTTACACCCCAGTTTCTTGAGCTAAAATTTATCGAGGCCATTGCTGATAATACAAAGATTTTCTTCGGGGACAAGGTTCCAAACATGATTTTCGATCAGAGGTTGCTCGGAAACTTCCTGCATCAGGTGGCGGAAAATGAATCAAGAAAAGCCTCAGGGGAGGCAGATTTAGAAATGTAATCCAAGATTTATCTTCTAATGGTCAGAAAACAATGGCGTCGGATGGTGATCTCCTTTTTCATGTTATACCAGATAACGTTTCAATGGGAAGCAATTTTCGTGATGCATCATTTGACAAACTCAAGTAAATACCTCCATTGAGATTTTCTTTTCTTGTTTAGCACACAAGTCTGTTTCACAAATTTTGAGTACTTACCAATAAACGTGATTTGAACTTGCATCGAATAAATTAATTTTAATAAATTTTGAGAGTAATGACGTGAACT ATGGATCGTAATCAGCCGCTGCAACCGCCATCTCCGCAGCCTCGTCCTCCAGAATCCGGTGGGAGTTCCTCATCCATACTTATAGTTTTCGCCTCCTTCCTGGCCATCTTTTCCATGGTGGTCTTTCCATCTCAATCAAACTTGTCAAGTAATCTTTCTATTTTACATCAAGTACCGGAGGGTCATGTGGGGGTATATTGGAGAGGAGGTGCCCTTCTGAAGACAATAACTGATCCAGGTTTCCATCTGAAGTTGCCACTGATAACCCAGTTTGTGCCTGTTCAAGTGACCCTCCAAACCGATCAAGTAAAGGACATTCCATGTGGTACTAAGGGGGGTGTGATGATCAACTTCGAGAAGATAGAGGTTGTCAATCGCCTCCGCAAAGAATATGTGTATGACACCCTGGTCAACTATGGTGTGAATTATGATAACATATGGATATATGATAAAATTCATCATGAGATCAATCAGTTTTGTAGCTCCCACAGTCTTCAACAAGTTTATATTGATGTCTTTGATCAGATCGATGAAAAGATGAAAGATGCCCTCCAAGGTGACTGTACACGTTATGCTCCTGGTATTGAAATAATCAGTGTTCGTGTAACCAAACCTACCATCCCAAATTCTATCAGAAAGAACTTTGAAGACATGGAAGTGGAACGTACAAAGGTTCTAATTGCCGTAGAGAGACAAAGGGTAGTAGAGAAAGAAGCAGAAACCAATAAAAAAATGGCAATTAGCGAAGCCGAGAAGAATGCTAATGTTAGCAGGATCCTCATGGAACAGAAATTGATGGAGAAGGAGAGTTCCAGGAGACAACAAGAAATTGATAACCACATCTATCTTGCTCGTGAAAAGAGTCTCGCGGATGCCAATTATTACCGGGTACTAAAAGAAGCTGAAGCCAACAAGTTGAAGCTTACACCCCAGTTTCTTGAGCTAAAATTTATCGAGGCCATTGCTGATAATACAAAGATTTTCTTCGGGGACAAGGTTCCAAACATGATTTTCGATCAGAGGTTGCTCGGAAACTTCCTGCATCAGGTGGCGGAAAATGAATCAAGAAAAGCCTCAGGGGAGGCAGATTTAGAAATGTAA MDRNQPLQPPSPQPRPPESGGSSSSILIVFASFLAIFSMVVFPSQSNLSSNLSILHQVPEGHVGVYWRGGALLKTITDPGFHLKLPLITQFVPVQVTLQTDQVKDIPCGTKGGVMINFEKIEVVNRLRKEYVYDTLVNYGVNYDNIWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQGDCTRYAPGIEIISVRVTKPTIPNSIRKNFEDMEVERTKVLIAVERQRVVEKEAETNKKMAISEAEKNANVSRILMEQKLMEKESSRRQQEIDNHIYLAREKSLADANYYRVLKEAEANKLKLTPQFLELKFIEAIADNTKIFFGDKVPNMIFDQRLLGNFLHQVAENESRKASGEADLEM Homology
BLAST of MELO3C011425.1 vs. NCBI nr
Match: XP_008445457.1 (PREDICTED: erlin-2-B [Cucumis melo] >XP_008445458.1 PREDICTED: erlin-2-B [Cucumis melo]) HSP 1 Score: 713.0 bits (1839), Expect = 1.3e-201 Identity = 366/366 (100.00%), Postives = 366/366 (100.00%), Query Frame = 0
BLAST of MELO3C011425.1 vs. NCBI nr
Match: XP_038886414.1 (erlin-2-B [Benincasa hispida]) HSP 1 Score: 686.8 bits (1771), Expect = 1.0e-193 Identity = 349/366 (95.36%), Postives = 358/366 (97.81%), Query Frame = 0
BLAST of MELO3C011425.1 vs. NCBI nr
Match: XP_023002790.1 (erlin-2-B-like [Cucurbita maxima] >XP_023002791.1 erlin-2-B-like [Cucurbita maxima] >XP_023002792.1 erlin-2-B-like [Cucurbita maxima] >XP_023002793.1 erlin-2-B-like [Cucurbita maxima]) HSP 1 Score: 671.4 bits (1731), Expect = 4.4e-189 Identity = 340/366 (92.90%), Postives = 356/366 (97.27%), Query Frame = 0
BLAST of MELO3C011425.1 vs. NCBI nr
Match: XP_023536725.1 (erlin-2-B-like [Cucurbita pepo subsp. pepo] >XP_023536727.1 erlin-2-B-like [Cucurbita pepo subsp. pepo] >XP_023536728.1 erlin-2-B-like [Cucurbita pepo subsp. pepo] >XP_023536729.1 erlin-2-B-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 667.2 bits (1720), Expect = 8.4e-188 Identity = 338/366 (92.35%), Postives = 355/366 (96.99%), Query Frame = 0
BLAST of MELO3C011425.1 vs. NCBI nr
Match: XP_022952024.1 (erlin-2-B-like [Cucurbita moschata] >XP_022952025.1 erlin-2-B-like [Cucurbita moschata] >XP_022952026.1 erlin-2-B-like [Cucurbita moschata] >XP_022952027.1 erlin-2-B-like [Cucurbita moschata]) HSP 1 Score: 666.0 bits (1717), Expect = 1.9e-187 Identity = 337/366 (92.08%), Postives = 355/366 (96.99%), Query Frame = 0
BLAST of MELO3C011425.1 vs. ExPASy Swiss-Prot
Match: Q6DKC0 (Erlin-2-B OS=Xenopus laevis OX=8355 GN=erlin2-b PE=2 SV=1) HSP 1 Score: 342.8 bits (878), Expect = 4.7e-93 Identity = 177/306 (57.84%), Postives = 225/306 (73.53%), Query Frame = 0
BLAST of MELO3C011425.1 vs. ExPASy Swiss-Prot
Match: Q1RMU4 (Erlin-2 OS=Bos taurus OX=9913 GN=ERLIN2 PE=2 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 2.6e-91 Identity = 177/321 (55.14%), Postives = 232/321 (72.27%), Query Frame = 0
BLAST of MELO3C011425.1 vs. ExPASy Swiss-Prot
Match: Q8BFZ9 (Erlin-2 OS=Mus musculus OX=10090 GN=Erlin2 PE=1 SV=1) HSP 1 Score: 335.9 bits (860), Expect = 5.8e-91 Identity = 172/302 (56.95%), Postives = 226/302 (74.83%), Query Frame = 0
BLAST of MELO3C011425.1 vs. ExPASy Swiss-Prot
Match: B5DEH2 (Erlin-2 OS=Rattus norvegicus OX=10116 GN=Erlin2 PE=1 SV=1) HSP 1 Score: 335.9 bits (860), Expect = 5.8e-91 Identity = 172/302 (56.95%), Postives = 226/302 (74.83%), Query Frame = 0
BLAST of MELO3C011425.1 vs. ExPASy Swiss-Prot
Match: O94905 (Erlin-2 OS=Homo sapiens OX=9606 GN=ERLIN2 PE=1 SV=1) HSP 1 Score: 335.1 bits (858), Expect = 9.9e-91 Identity = 171/302 (56.62%), Postives = 226/302 (74.83%), Query Frame = 0
BLAST of MELO3C011425.1 vs. ExPASy TrEMBL
Match: A0A1S3BCS3 (erlin-2-B OS=Cucumis melo OX=3656 GN=LOC103488474 PE=3 SV=1) HSP 1 Score: 713.0 bits (1839), Expect = 6.4e-202 Identity = 366/366 (100.00%), Postives = 366/366 (100.00%), Query Frame = 0
BLAST of MELO3C011425.1 vs. ExPASy TrEMBL
Match: A0A6J1KKH4 (erlin-2-B-like OS=Cucurbita maxima OX=3661 GN=LOC111496550 PE=3 SV=1) HSP 1 Score: 671.4 bits (1731), Expect = 2.1e-189 Identity = 340/366 (92.90%), Postives = 356/366 (97.27%), Query Frame = 0
BLAST of MELO3C011425.1 vs. ExPASy TrEMBL
Match: A0A6J1GKK5 (erlin-2-B-like OS=Cucurbita moschata OX=3662 GN=LOC111454737 PE=3 SV=1) HSP 1 Score: 666.0 bits (1717), Expect = 9.0e-188 Identity = 337/366 (92.08%), Postives = 355/366 (96.99%), Query Frame = 0
BLAST of MELO3C011425.1 vs. ExPASy TrEMBL
Match: A0A0A0KIQ3 (PHB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G366440 PE=3 SV=1) HSP 1 Score: 663.3 bits (1710), Expect = 5.8e-187 Identity = 338/348 (97.13%), Postives = 343/348 (98.56%), Query Frame = 0
BLAST of MELO3C011425.1 vs. ExPASy TrEMBL
Match: A0A6J1BPL3 (erlin-2-B OS=Momordica charantia OX=3673 GN=LOC111004670 PE=3 SV=1) HSP 1 Score: 662.1 bits (1707), Expect = 1.3e-186 Identity = 336/366 (91.80%), Postives = 348/366 (95.08%), Query Frame = 0
BLAST of MELO3C011425.1 vs. TAIR 10
Match: AT2G03510.1 (SPFH/Band 7/PHB domain-containing membrane-associated protein family ) HSP 1 Score: 520.8 bits (1340), Expect = 9.0e-148 Identity = 263/344 (76.45%), Postives = 299/344 (86.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|