MELO3C011229.jh1.t1 (mRNA) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonstart_codonCDSpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.GCCCAAACTCTCCCCCTTCTTCCTTCTTGCATAGTCCATCTCTTTAATTTTACGTTTATTAACCATTAATATGCCTTCATAAAGCCCCTCTGTTATTTCTCCCATAACCCTTGCAAAATACTAACTTTTGCCACCTTTTCCTTTTCATTATTTCAGCTAAGTCCTCTCGAAGAAATCTAGGTAAGTCGATCTCTTCTTTTATATATATTTAAAAATAATAATAAGACATTGTATGATAGTAACTTTTACTATGACCAATTTTATCGTGATAGATAGTAAAGAACACAACAAAAACTTGTTTTTATAAATAGAAACTAAAAGCAAACACATATAAGATGTTATGTTTTTTCAATAACCTATTTTTATATTTATCAATAGAAAAATCTTGATCTCAACATCATCATTCCAAATTCTAAGTCTCTAAGTACCCATCATGACATTGGGGATTGAAAATACATGTAATAAAAATATTACAAAAATAAGGAGGATTTTGGTTTAGATGAGAATAAGGAAGAAAGTTTAAAGGTGGACAAATAAAGTTATAGGTCATAACTAATTAAATTAAATTTATAATCTATTGATTAGGAATTATTTTAATTGCAAATGAATAGCATGAGATTATTTTCCAAAAGTATGGGTACATTGGATAAGATTGTCCTAAGAAAAGCCCATTTTGGTTAAGAATCCTAAAATGGTTATATGTTGCTAATAAAAGCGCTTCTATAACAAGTAAACTCAAACATTTCCACTTTAAATTCCATCAATTTTCTTCTTCATCAACATCTATCTTCATCTTCAATAGAATTTGTATGTTATTCCTTTTTCTTTTTTTCTTCTTCTTCTTGTTTTTTTTTTTTTTACATTAAAGAAAACTACAATTTATGCATCCATAATTAGCGAAATTCCACGTAATCACCGTCGATCGCCGGCCGAAAACACTGACCTGACGTGGCAATTACTCTAGGTGGGTCCACAGGCTAAGAATTTAAAAGGCCATCCACGTCGGACCGACTGGGGCCGGCGAATCCTCGGTGGCTTCTCCCAATTGGATGAATATTCGGTGACCGATTTATTCGGCATTTGAAAATTAGTTTTTATTCAATTTTCACATATAAAGTGAATGCGATTTGCTTTAATTATATTCGATTTGTTTTCTTTTTTCTTTTTGGAATGAAGAAAAAAAAAAAGAAAAGGGATTGAATTTGCGTTTTGATAATTTACCACAGGAATTTAATAACTGAAACGACATGTCGAATATTCCTCCTCCGTTTCTCTCGCGATGCCTCTTCTCCATCTTCTTCATCGCTCACCTCTTCCATCTCTCCCATGGAGATGTCGGTAGTGCAACACATTACGGTCCTCCTTACTTACGTAAGTTAATTAATCCACAAAAATTCCACTCACATTTCTTCAAAATTTTCAATTTCAAATTTCAATCAATGAAAAGCTAAGAAATTATTATCTTTACACAGCTACCGCTTGTTTCGGAAACGATTTCTCGATGTTTCCGACGAACAACATGTTCGGGGCAGCCGGAGAAGGAATATGGGAGAATGGAGCGGCTTGTGGAAGACAATACCGAGTGAGATGCTTTAGTTCCGCCGTACCGAACTCGTGTGTTCGCGATCAGACGATTAGAATCACGATCGTGGATCGTGCGGTTTCGACGGTTGCGAAAGCAGCGGTGGCGGATACGACCATGACGTTGTCAACGACGGCGTATAAAGCGATCGTTCAAGGATCTGCGTCGCTGGTGAACATCGAATACACGCAGTGAGTGGTTAATTAATTTGGACAACAATTTTTATGGGTTTTTTTCCAGAGTCAGTTTTGGATTTGATTGGAGTGAAATTTCTTGTTAATTTTTTTTTTTTTTTGCAGGAATTGAATTGAAAATTCATGGAGGAAAGGAAATGAGGATTATGATCATATGATGTATGAATATAGTGTTTTTTATTATCTTCTTTTTGGTTTGTTGCTGACCGGTTCAAATTGTAGAACTGTGAAGAAGATGAAGTCCATGTGTTGGGTTTCCGCCATTGACACACACAACTAATTCTTCTATATACTCCCCCTCCATTTATTGTATTTTCAAAAGCATAAAAAAAAAAAAATACTATTGTAGTTTTTCTATTCTATAAATACAAAACTAAATTTTACTGTTTGG GCCCAAACTCTCCCCCTTCTTCCTTCTTGCATAGTCCATCTCTTTAATTTTACGTTTATTAACCATTAATATGCCTTCATAAAGCCCCTCTGTTATTTCTCCCATAACCCTTGCAAAATACTAACTTTTGCCACCTTTTCCTTTTCATTATTTCAGCTAAGTCCTCTCGAAGAAATCTAGGAATTTAATAACTGAAACGACATGTCGAATATTCCTCCTCCGTTTCTCTCGCGATGCCTCTTCTCCATCTTCTTCATCGCTCACCTCTTCCATCTCTCCCATGGAGATGTCGGTAGTGCAACACATTACGGTCCTCCTTACTTACCTACCGCTTGTTTCGGAAACGATTTCTCGATGTTTCCGACGAACAACATGTTCGGGGCAGCCGGAGAAGGAATATGGGAGAATGGAGCGGCTTGTGGAAGACAATACCGAGTGAGATGCTTTAGTTCCGCCGTACCGAACTCGTGTGTTCGCGATCAGACGATTAGAATCACGATCGTGGATCGTGCGGTTTCGACGGTTGCGAAAGCAGCGGTGGCGGATACGACCATGACGTTGTCAACGACGGCGTATAAAGCGATCGTTCAAGGATCTGCGTCGCTGGTGAACATCGAATACACGCAGAATTGAATTGAAAATTCATGGAGGAAAGGAAATGAGGATTATGATCATATGATGTATGAATATAGTGTTTTTTATTATCTTCTTTTTGGTTTGTTGCTGACCGGTTCAAATTGTAGAACTGTGAAGAAGATGAAGTCCATGTGTTGGGTTTCCGCCATTGACACACACAACTAATTCTTCTATATACTCCCCCTCCATTTATTGTATTTTCAAAAGCATAAAAAAAAAAAAATACTATTGTAGTTTTTCTATTCTATAAATACAAAACTAAATTTTACTGTTTGG ATGTCGAATATTCCTCCTCCGTTTCTCTCGCGATGCCTCTTCTCCATCTTCTTCATCGCTCACCTCTTCCATCTCTCCCATGGAGATGTCGGTAGTGCAACACATTACGGTCCTCCTTACTTACCTACCGCTTGTTTCGGAAACGATTTCTCGATGTTTCCGACGAACAACATGTTCGGGGCAGCCGGAGAAGGAATATGGGAGAATGGAGCGGCTTGTGGAAGACAATACCGAGTGAGATGCTTTAGTTCCGCCGTACCGAACTCGTGTGTTCGCGATCAGACGATTAGAATCACGATCGTGGATCGTGCGGTTTCGACGGTTGCGAAAGCAGCGGTGGCGGATACGACCATGACGTTGTCAACGACGGCGTATAAAGCGATCGTTCAAGGATCTGCGTCGCTGGTGAACATCGAATACACGCAGAATTGA MSNIPPPFLSRCLFSIFFIAHLFHLSHGDVGSATHYGPPYLPTACFGNDFSMFPTNNMFGAAGEGIWENGAACGRQYRVRCFSSAVPNSCVRDQTIRITIVDRAVSTVAKAAVADTTMTLSTTAYKAIVQGSASLVNIEYTQN Homology
BLAST of MELO3C011229.jh1.t1 vs. NCBI nr
Match: XP_008445151.1 (PREDICTED: EG45-like domain containing protein [Cucumis melo] >XP_008445152.1 PREDICTED: EG45-like domain containing protein [Cucumis melo] >XP_016899971.1 PREDICTED: EG45-like domain containing protein [Cucumis melo]) HSP 1 Score: 287 bits (734), Expect = 1.17e-97 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0
BLAST of MELO3C011229.jh1.t1 vs. NCBI nr
Match: KAA0064959.1 (EG45-like domain containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 285 bits (728), Expect = 9.29e-97 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of MELO3C011229.jh1.t1 vs. NCBI nr
Match: XP_011649798.1 (EG45-like domain containing protein [Cucumis sativus] >KGN62912.1 hypothetical protein Csa_022183 [Cucumis sativus]) HSP 1 Score: 228 bits (582), Expect = 1.70e-74 Identity = 119/144 (82.64%), Postives = 125/144 (86.81%), Query Frame = 0
BLAST of MELO3C011229.jh1.t1 vs. NCBI nr
Match: XP_038886390.1 (EG45-like domain containing protein [Benincasa hispida]) HSP 1 Score: 216 bits (551), Expect = 7.62e-70 Identity = 106/130 (81.54%), Postives = 118/130 (90.77%), Query Frame = 0
BLAST of MELO3C011229.jh1.t1 vs. NCBI nr
Match: KAG7020366.1 (EG45-like domain containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 199 bits (507), Expect = 3.61e-63 Identity = 97/135 (71.85%), Postives = 117/135 (86.67%), Query Frame = 0
BLAST of MELO3C011229.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q9ZP41 (EG45-like domain containing protein OS=Citrus jambhiri OX=64884 GN=CjBAp12 PE=1 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 7.0e-08 Identity = 41/122 (33.61%), Postives = 58/122 (47.54%), Query Frame = 0
BLAST of MELO3C011229.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q9ZV52 (EG45-like domain containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=EGC2 PE=2 SV=2) HSP 1 Score: 51.6 bits (122), Expect = 8.5e-06 Identity = 34/127 (26.77%), Postives = 55/127 (43.31%), Query Frame = 0
BLAST of MELO3C011229.jh1.t1 vs. ExPASy TrEMBL
Match: A0A1S3BC04 (EG45-like domain containing protein OS=Cucumis melo OX=3656 GN=LOC103488275 PE=4 SV=1) HSP 1 Score: 287 bits (734), Expect = 5.66e-98 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0
BLAST of MELO3C011229.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5A7VHL3 (EG45-like domain containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002800 PE=4 SV=1) HSP 1 Score: 285 bits (728), Expect = 4.50e-97 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of MELO3C011229.jh1.t1 vs. ExPASy TrEMBL
Match: A0A0A0LQ33 (Expansin-like EG45 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G379920 PE=4 SV=1) HSP 1 Score: 228 bits (582), Expect = 8.22e-75 Identity = 119/144 (82.64%), Postives = 125/144 (86.81%), Query Frame = 0
BLAST of MELO3C011229.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6J1GJR6 (EG45-like domain containing protein OS=Cucurbita moschata OX=3662 GN=LOC111454490 PE=4 SV=1) HSP 1 Score: 199 bits (507), Expect = 1.80e-63 Identity = 97/135 (71.85%), Postives = 117/135 (86.67%), Query Frame = 0
BLAST of MELO3C011229.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6J1KQR3 (EG45-like domain containing protein OS=Cucurbita maxima OX=3661 GN=LOC111496357 PE=4 SV=1) HSP 1 Score: 196 bits (497), Expect = 6.02e-62 Identity = 95/135 (70.37%), Postives = 116/135 (85.93%), Query Frame = 0
BLAST of MELO3C011229.jh1.t1 vs. TAIR 10
Match: AT2G18660.1 (plant natriuretic peptide A ) HSP 1 Score: 51.6 bits (122), Expect = 6.1e-07 Identity = 34/127 (26.77%), Postives = 55/127 (43.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
|