MELO3C010841.1 (mRNA) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCTTCTTCCAAACACCACCTCATTTCCCACTTTCTTTTCTTTTACCAATTATAATTATGGGGTTTGCGTTTGTGTGTGTATATAATAAGAGGTGGTGGGTTTGATCCAATTCTTGACCATATGGTATTAAACATGAAGGTTCATCAGTTTGCACGTGGATTTTGGGACGAACCCTCTCTCTCCCTTGGCTGCAAACGCTTACGCCCTCTTGCTCCTAAACTTCAACAACCCACCTCCGATAACACAACCACCACCACCACCACCACCACCCTCACCACTTTCGACCTCAAAACCTTCATCAAACCCGATTGTGGTCCTCGCAAACCAGGTTCCTCCCATGATCACAGCAAAGACTCTTCCTCCTCTTCCTCTTCCCTCCAGGTAACTAATCAACAACTACTCTTTTAATTACAAATATACTTCCAATATCTAAAAAAAAAAAAAAAACCCTTGGTCTGTACAGACAGGGGTGGAAACGCACCCAGGAGGGACACGGTGGAATCCAACTCAAGAACAAATTGGGATATTGGAGATGCTTTATAGTAGAGGAATGAGGACTCCCAATGCCCAACAAATCGAACACATCACTGCACAACTTGGCAACTACGGAAAGATTGAAGGCAAGAATGTTTTTTATTGGTTTCAAAATCATAAAGCCCGTGAACGACAGAAACAGAAACGCAACAGTCTTGGTCTTCCACACTCTCCAAGAACTCCTCCCCCTCCTCCCATCATTCCCGCCTTCCACACGGTACGTTTCGGAAATAATCTGGCATGTCTTTTAATAATCATTATCCCTGCTTCCATATAAATTAATCATAACACGAGGAATATAAATTAATTTGCAGGGAGATGAAGATAGTCCGTACAAGAGGAAGTGCTTGTATTGGGGTTTTGAGTGTTTGGTAGAAGATAATGGTTTAATGTGTAAAAAGGAGGAAGGTCATGATAGGACTTTGGAGTTATTCCCCTTGCACCCAGAACGCTGATGATCCAATTTTTTTGAAATTCAAAAAAAGCAAAGAAAAATTGCATCTTTTTCTATGATCATAAGTTGTTATGAACTATCTTTTTCTTTTTCTTTTCTTCTCTCGTTTTCGAGAAAAAGAAAAGAAAGGTCGAAGAATAACAACTACCACTTCTCTTCTTTGTACTCATGTATGACGTACTGCCAAATTTCTTATGTGAAAGAAAGCGGAGGATAAATCCTGATTTCTATTCCTTTTCACAAAACTTCCTTTAGTTTTAAGTTAGTGAGA TGCTTCTTCCAAACACCACCTCATTTCCCACTTTCTTTTCTTTTACCAATTATAATTATGGGGTTTGCGTTTGTGTGTGTATATAATAAGAGGTGGTGGGTTTGATCCAATTCTTGACCATATGGTATTAAACATGAAGGTTCATCAGTTTGCACGTGGATTTTGGGACGAACCCTCTCTCTCCCTTGGCTGCAAACGCTTACGCCCTCTTGCTCCTAAACTTCAACAACCCACCTCCGATAACACAACCACCACCACCACCACCACCACCCTCACCACTTTCGACCTCAAAACCTTCATCAAACCCGATTGTGGTCCTCGCAAACCAGGTTCCTCCCATGATCACAGCAAAGACTCTTCCTCCTCTTCCTCTTCCCTCCAGACAGGGGTGGAAACGCACCCAGGAGGGACACGGTGGAATCCAACTCAAGAACAAATTGGGATATTGGAGATGCTTTATAGTAGAGGAATGAGGACTCCCAATGCCCAACAAATCGAACACATCACTGCACAACTTGGCAACTACGGAAAGATTGAAGGCAAGAATGTTTTTTATTGGTTTCAAAATCATAAAGCCCGTGAACGACAGAAACAGAAACGCAACAGTCTTGGTCTTCCACACTCTCCAAGAACTCCTCCCCCTCCTCCCATCATTCCCGCCTTCCACACGGGAGATGAAGATAGTCCGTACAAGAGGAAGTGCTTGTATTGGGGTTTTGAGTGTTTGGTAGAAGATAATGGTTTAATGTGTAAAAAGGAGGAAGGTCATGATAGGACTTTGGAGTTATTCCCCTTGCACCCAGAACGCTGATGATCCAATTTTTTTGAAATTCAAAAAAAGCAAAGAAAAATTGCATCTTTTTCTATGATCATAAGTTGTTATGAACTATCTTTTTCTTTTTCTTTTCTTCTCTCGTTTTCGAGAAAAAGAAAAGAAAGGTCGAAGAATAACAACTACCACTTCTCTTCTTTGTACTCATGTATGACGTACTGCCAAATTTCTTATGTGAAAGAAAGCGGAGGATAAATCCTGATTTCTATTCCTTTTCACAAAACTTCCTTTAGTTTTAAGTTAGTGAGA ATGGTATTAAACATGAAGGTTCATCAGTTTGCACGTGGATTTTGGGACGAACCCTCTCTCTCCCTTGGCTGCAAACGCTTACGCCCTCTTGCTCCTAAACTTCAACAACCCACCTCCGATAACACAACCACCACCACCACCACCACCACCCTCACCACTTTCGACCTCAAAACCTTCATCAAACCCGATTGTGGTCCTCGCAAACCAGGTTCCTCCCATGATCACAGCAAAGACTCTTCCTCCTCTTCCTCTTCCCTCCAGACAGGGGTGGAAACGCACCCAGGAGGGACACGGTGGAATCCAACTCAAGAACAAATTGGGATATTGGAGATGCTTTATAGTAGAGGAATGAGGACTCCCAATGCCCAACAAATCGAACACATCACTGCACAACTTGGCAACTACGGAAAGATTGAAGGCAAGAATGTTTTTTATTGGTTTCAAAATCATAAAGCCCGTGAACGACAGAAACAGAAACGCAACAGTCTTGGTCTTCCACACTCTCCAAGAACTCCTCCCCCTCCTCCCATCATTCCCGCCTTCCACACGGGAGATGAAGATAGTCCGTACAAGAGGAAGTGCTTGTATTGGGGTTTTGAGTGTTTGGTAGAAGATAATGGTTTAATGTGTAAAAAGGAGGAAGGTCATGATAGGACTTTGGAGTTATTCCCCTTGCACCCAGAACGCTGA MVLNMKVHQFARGFWDEPSLSLGCKRLRPLAPKLQQPTSDNTTTTTTTTTLTTFDLKTFIKPDCGPRKPGSSHDHSKDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAFHTGDEDSPYKRKCLYWGFECLVEDNGLMCKKEEGHDRTLELFPLHPER Homology
BLAST of MELO3C010841.1 vs. NCBI nr
Match: XP_008444600.1 (PREDICTED: WUSCHEL-related homeobox 4 [Cucumis melo]) HSP 1 Score: 479.9 bits (1234), Expect = 1.2e-131 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0
BLAST of MELO3C010841.1 vs. NCBI nr
Match: ADN33723.1 (homeodomain transcription factor [Cucumis melo subsp. melo]) HSP 1 Score: 472.6 bits (1215), Expect = 1.9e-129 Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0
BLAST of MELO3C010841.1 vs. NCBI nr
Match: XP_004142872.1 (WUSCHEL-related homeobox 4 [Cucumis sativus] >KGN62487.1 hypothetical protein Csa_018691 [Cucumis sativus]) HSP 1 Score: 468.0 bits (1203), Expect = 4.7e-128 Identity = 225/229 (98.25%), Postives = 226/229 (98.69%), Query Frame = 0
BLAST of MELO3C010841.1 vs. NCBI nr
Match: KAA0060918.1 (WUSCHEL-related homeobox 4 [Cucumis melo var. makuwa]) HSP 1 Score: 464.9 bits (1195), Expect = 3.9e-127 Identity = 223/225 (99.11%), Postives = 223/225 (99.11%), Query Frame = 0
BLAST of MELO3C010841.1 vs. NCBI nr
Match: XP_038885673.1 (WUSCHEL-related homeobox 4 [Benincasa hispida]) HSP 1 Score: 453.0 bits (1164), Expect = 1.6e-123 Identity = 222/235 (94.47%), Postives = 228/235 (97.02%), Query Frame = 0
BLAST of MELO3C010841.1 vs. ExPASy Swiss-Prot
Match: Q6X7J9 (WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 5.7e-52 Identity = 134/262 (51.15%), Postives = 154/262 (58.78%), Query Frame = 0
BLAST of MELO3C010841.1 vs. ExPASy Swiss-Prot
Match: Q25AM2 (WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. indica OX=39946 GN=WOX4 PE=3 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.1e-28 Identity = 90/229 (39.30%), Postives = 117/229 (51.09%), Query Frame = 0
BLAST of MELO3C010841.1 vs. ExPASy Swiss-Prot
Match: Q7XTV3 (WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX4 PE=2 SV=2) HSP 1 Score: 128.3 bits (321), Expect = 1.1e-28 Identity = 90/229 (39.30%), Postives = 117/229 (51.09%), Query Frame = 0
BLAST of MELO3C010841.1 vs. ExPASy Swiss-Prot
Match: A2WWU7 (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. indica OX=39946 GN=WOX5 PE=3 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 3.0e-21 Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 0
BLAST of MELO3C010841.1 vs. ExPASy Swiss-Prot
Match: Q8LR86 (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX5 PE=2 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 3.0e-21 Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 0
BLAST of MELO3C010841.1 vs. ExPASy TrEMBL
Match: A0A1S3BBG0 (WUSCHEL-related homeobox 4 OS=Cucumis melo OX=3656 GN=LOC103487871 PE=4 SV=1) HSP 1 Score: 479.9 bits (1234), Expect = 5.7e-132 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0
BLAST of MELO3C010841.1 vs. ExPASy TrEMBL
Match: E5GB81 (Homeodomain transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 472.6 bits (1215), Expect = 9.2e-130 Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0
BLAST of MELO3C010841.1 vs. ExPASy TrEMBL
Match: A0A0A0LNZ2 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G356610 PE=4 SV=1) HSP 1 Score: 468.0 bits (1203), Expect = 2.3e-128 Identity = 225/229 (98.25%), Postives = 226/229 (98.69%), Query Frame = 0
BLAST of MELO3C010841.1 vs. ExPASy TrEMBL
Match: A0A5A7V042 (WUSCHEL-related homeobox 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00510 PE=4 SV=1) HSP 1 Score: 464.9 bits (1195), Expect = 1.9e-127 Identity = 223/225 (99.11%), Postives = 223/225 (99.11%), Query Frame = 0
BLAST of MELO3C010841.1 vs. ExPASy TrEMBL
Match: A0A6J1HCY5 (WUSCHEL-related homeobox 4-like OS=Cucurbita moschata OX=3662 GN=LOC111462837 PE=4 SV=1) HSP 1 Score: 394.8 bits (1013), Expect = 2.4e-106 Identity = 198/238 (83.19%), Postives = 211/238 (88.66%), Query Frame = 0
BLAST of MELO3C010841.1 vs. TAIR 10
Match: AT1G46480.1 (WUSCHEL related homeobox 4 ) HSP 1 Score: 205.7 bits (522), Expect = 4.0e-53 Identity = 134/262 (51.15%), Postives = 154/262 (58.78%), Query Frame = 0
BLAST of MELO3C010841.1 vs. TAIR 10
Match: AT3G11260.1 (WUSCHEL related homeobox 5 ) HSP 1 Score: 97.8 bits (242), Expect = 1.2e-20 Identity = 57/137 (41.61%), Postives = 74/137 (54.01%), Query Frame = 0
BLAST of MELO3C010841.1 vs. TAIR 10
Match: AT5G59340.1 (WUSCHEL related homeobox 2 ) HSP 1 Score: 97.1 bits (240), Expect = 2.0e-20 Identity = 49/85 (57.65%), Postives = 61/85 (71.76%), Query Frame = 0
BLAST of MELO3C010841.1 vs. TAIR 10
Match: AT2G28610.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 95.9 bits (237), Expect = 4.5e-20 Identity = 44/64 (68.75%), Postives = 52/64 (81.25%), Query Frame = 0
BLAST of MELO3C010841.1 vs. TAIR 10
Match: AT2G17950.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 92.4 bits (228), Expect = 5.0e-19 Identity = 51/105 (48.57%), Postives = 64/105 (60.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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