MELO3C009427.jh1.t1 (mRNA) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.TCAGCCTTCTGCAGCAACAACCCATCATCATCATCTGAGAAACCATGAAGCCAATCGACGAGAAGAAGGACAAAGTTGCGATTCGAGCCGTTACCCGAGACGAGGAAGGGAAGAAACATATCGAAAAAGCTGAAATCGAATCTCACAACATTGACACCATCAAATACATTGAGAAGAAGCTCATCGACAAGGGAGTTCAGCGCCTCGAACGCCATCCGGTTCACGGCCACACTGGAATCGCGCAGCCGCCTCCCAAATCCGGCCGTGGTGGCAAGTTCACTTGGGAAGGACCTGGCGATGCGATTGAGAATGAGCTCTCGCCTGCTCCGCCTGCCATTGATGAGAAGGATCCGAACTACGTGGATGAAGTGAAGGAGGAAGAGGAGGAGGTGGCCGGATTGGTGGTCGGAGAAGTGGAGGTTCCAGCGGCGGCGCCGGAGGGAGTTTCGAGAGTAGAGGTGGATCCTCAGCTTCAATTGCAATGAAATTGAGGAGCTGTGTTTGATGATTGAGTACTTTTGGGTCTTTGTTTCTTCTTTTTTCTTTGTTGTGTGAGAGATTTTAGAAAACAAACTTCACAAACTTCATGGATGGATTAAATGTTGTTATCAATAAATAAATATAAGATGGAAATTGTTCTTCTAAATGTATAATTAAGTGGATGGTTGGTGTAGTGTTAGTATCAAA TCAGCCTTCTGCAGCAACAACCCATCATCATCATCTGAGAAACCATGAAGCCAATCGACGAGAAGAAGGACAAAGTTGCGATTCGAGCCGTTACCCGAGACGAGGAAGGGAAGAAACATATCGAAAAAGCTGAAATCGAATCTCACAACATTGACACCATCAAATACATTGAGAAGAAGCTCATCGACAAGGGAGTTCAGCGCCTCGAACGCCATCCGGTTCACGGCCACACTGGAATCGCGCAGCCGCCTCCCAAATCCGGCCGTGGTGGCAAGTTCACTTGGGAAGGACCTGGCGATGCGATTGAGAATGAGCTCTCGCCTGCTCCGCCTGCCATTGATGAGAAGGATCCGAACTACGTGGATGAAGTGAAGGAGGAAGAGGAGGAGGTGGCCGGATTGGTGGTCGGAGAAGTGGAGGTTCCAGCGGCGGCGCCGGAGGGAGTTTCGAGAGTAGAGGTGGATCCTCAGCTTCAATTGCAATGAAATTGAGGAGCTGTGTTTGATGATTGAGTACTTTTGGGTCTTTGTTTCTTCTTTTTTCTTTGTTGTGTGAGAGATTTTAGAAAACAAACTTCACAAACTTCATGGATGGATTAAATGTTGTTATCAATAAATAAATATAAGATGGAAATTGTTCTTCTAAATGTATAATTAAGTGGATGGTTGGTGTAGTGTTAGTATCAAA ATGAAGCCAATCGACGAGAAGAAGGACAAAGTTGCGATTCGAGCCGTTACCCGAGACGAGGAAGGGAAGAAACATATCGAAAAAGCTGAAATCGAATCTCACAACATTGACACCATCAAATACATTGAGAAGAAGCTCATCGACAAGGGAGTTCAGCGCCTCGAACGCCATCCGGTTCACGGCCACACTGGAATCGCGCAGCCGCCTCCCAAATCCGGCCGTGGTGGCAAGTTCACTTGGGAAGGACCTGGCGATGCGATTGAGAATGAGCTCTCGCCTGCTCCGCCTGCCATTGATGAGAAGGATCCGAACTACGTGGATGAAGTGAAGGAGGAAGAGGAGGAGGTGGCCGGATTGGTGGTCGGAGAAGTGGAGGTTCCAGCGGCGGCGCCGGAGGGAGTTTCGAGAGTAGAGGTGGATCCTCAGCTTCAATTGCAATGA MKPIDEKKDKVAIRAVTRDEEGKKHIEKAEIESHNIDTIKYIEKKLIDKGVQRLERHPVHGHTGIAQPPPKSGRGGKFTWEGPGDAIENELSPAPPAIDEKDPNYVDEVKEEEEEVAGLVVGEVEVPAAAPEGVSRVEVDPQLQLQ Homology
BLAST of MELO3C009427.jh1.t1 vs. NCBI nr
Match: XP_008442790.1 (PREDICTED: uncharacterized protein LOC103486565 [Cucumis melo] >KAA0043928.1 uncharacterized protein E6C27_scaffold236G002680 [Cucumis melo var. makuwa] >TYK25211.1 uncharacterized protein E5676_scaffold352G003410 [Cucumis melo var. makuwa]) HSP 1 Score: 282 bits (722), Expect = 9.91e-96 Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 0
BLAST of MELO3C009427.jh1.t1 vs. NCBI nr
Match: XP_004137866.1 (uncharacterized protein LOC101207081 [Cucumis sativus] >KGN59049.1 hypothetical protein Csa_002138 [Cucumis sativus]) HSP 1 Score: 269 bits (687), Expect = 2.01e-90 Identity = 138/146 (94.52%), Postives = 142/146 (97.26%), Query Frame = 0
BLAST of MELO3C009427.jh1.t1 vs. NCBI nr
Match: XP_038904411.1 (uncharacterized protein LOC120090774 [Benincasa hispida]) HSP 1 Score: 263 bits (672), Expect = 4.04e-88 Identity = 138/146 (94.52%), Postives = 140/146 (95.89%), Query Frame = 0
BLAST of MELO3C009427.jh1.t1 vs. NCBI nr
Match: XP_022983153.1 (uncharacterized protein LOC111481791 [Cucurbita maxima]) HSP 1 Score: 230 bits (587), Expect = 3.91e-75 Identity = 124/148 (83.78%), Postives = 132/148 (89.19%), Query Frame = 0
BLAST of MELO3C009427.jh1.t1 vs. NCBI nr
Match: XP_023528786.1 (uncharacterized protein LOC111791618 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 227 bits (578), Expect = 8.90e-74 Identity = 121/148 (81.76%), Postives = 132/148 (89.19%), Query Frame = 0
BLAST of MELO3C009427.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5A7TM42 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003410 PE=4 SV=1) HSP 1 Score: 282 bits (722), Expect = 4.80e-96 Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 0
BLAST of MELO3C009427.jh1.t1 vs. ExPASy TrEMBL
Match: A0A1S3B6J5 (uncharacterized protein LOC103486565 OS=Cucumis melo OX=3656 GN=LOC103486565 PE=4 SV=1) HSP 1 Score: 282 bits (722), Expect = 4.80e-96 Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 0
BLAST of MELO3C009427.jh1.t1 vs. ExPASy TrEMBL
Match: A0A0A0LDV1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G748780 PE=4 SV=1) HSP 1 Score: 269 bits (687), Expect = 9.75e-91 Identity = 138/146 (94.52%), Postives = 142/146 (97.26%), Query Frame = 0
BLAST of MELO3C009427.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6J1J6Y7 (uncharacterized protein LOC111481791 OS=Cucurbita maxima OX=3661 GN=LOC111481791 PE=4 SV=1) HSP 1 Score: 230 bits (587), Expect = 1.89e-75 Identity = 124/148 (83.78%), Postives = 132/148 (89.19%), Query Frame = 0
BLAST of MELO3C009427.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6J1F9T7 (uncharacterized protein LOC111442115 OS=Cucurbita moschata OX=3662 GN=LOC111442115 PE=4 SV=1) HSP 1 Score: 226 bits (575), Expect = 1.23e-73 Identity = 121/148 (81.76%), Postives = 131/148 (88.51%), Query Frame = 0
BLAST of MELO3C009427.jh1.t1 vs. TAIR 10
Match: AT3G10020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress, anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 47 Blast hits to 47 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 137.5 bits (345), Expect = 8.6e-33 Identity = 75/142 (52.82%), Postives = 105/142 (73.94%), Query Frame = 0
BLAST of MELO3C009427.jh1.t1 vs. TAIR 10
Match: AT3G10020.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress, anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 116.7 bits (291), Expect = 1.6e-26 Identity = 63/124 (50.81%), Postives = 91/124 (73.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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