MELO3C008671.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C008671.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Ubiquitin hydrolase
Location	chr05: 16664750 .. 16668284 (-)
Sequence length	1085
RNA-Seq Expression	MELO3C008671.1
Synteny	MELO3C008671.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGAAAACTGAAACACCCAAAAAGCTTCTCTAAACTTTTTGCTTTTTTTCTCTTACCTCTGATTTGCTCATCACTTTCTTTCTTTTTCCCTGCTTCCATTGCCCTAATCAGAACCTTCATATTCCTAAACAAATTTCTTCTAAAAGTCAAAAATATCCATTGCCTTCTCCTTCTTCTTCTCCTTCCTCATTCTCATCCTCCTCTCTTTCCCCTTTTTTCTTTCCCTTCTTCTTCTTCTTCTTCTCTCTCTTATGGAAGTCTCTGTAAGTAACATTTTCCTCTCTCCTTTTTTTTTTCCTTAAAAAAAACCTTCTTCTTCTTCGTCTGTCTCTACTACAGATCTCTATCTATTGAGTTTCATTTCATTTCAATTTATATTTCTCTGTTTATTTTTTTTTATGCAAGATTTATTCAAACAGAAACAGTGGCCAAATCCACTTGCAACACCACCAAATCCCGGCGTTTGGAGACTGGGATAAGGCTAAAGATTTGCCGATCACTCAGTATTTCGAAACAGCTCGTCAAGCCGGTTTGATCCGCTACAGTTCCTCCTCCGGAGAAAGTGGCCCCTGCCTTCCTCCTTCCGACTTGTACTCCGCCGATCGGATGAAACCTCTGCCACTCCCCACCACCGCGCGCAAGGTCTCCATATCTCTCTTAATTGTTTACCTCCGATTACAATGACGAATTGTATCTCTCTGTTTCTTTGTAGTACTAATTTTAGAATAAATCGAAGGGATGGGGTAGGTATTTTCCGAGAAAATGAAGCGATATTTTTCTAGGGAAACAAACAAGGAATTTATTAGAGGTTTTTTTTCTTTCTTTTCTTTAATTATTGAATTAAATCACGGGAAATTGGGTTGGTGAAAGGAATGAAACGCGAAATGAGGGTGAGGGTGAGAGTGTGGATATGGAATATACTTATTGAGACACGTGGCGGGACTTTGCAGGGACGGGTGAGGGAAAAGCGTTACCCGCATGTGGGATTAAAAGAACATCATCAAATTCCAATAAAGAAACAGCAAATGATGATGATGCAGCAAGGGGGGAGAGTGTTCGACGTGACGGAAACGGGGGGTGCCCGAAAGTTGAAGCAAAACGACCTGTCCTCCATTCCCCGTCCTCCGCCTAGATCTAATCTTACTACAATTCCTAAACCTGTTGATGAAGATCTCTACAAAATCCCACCTGAACTCCTCCATTCTTCTAAGCGGGTATTTCCTTCCCTCCTCTTCCACCTCTTTTTCTTATTTAATTAATAGTTTCCTCTCTACCTCAATCCACATAATCTAGACATTTTTCTTTTTTTCCTTTCTATGAATGATTCGTATTTGATTTCGCCACTGTCAATTCAAAGATAATGAAAACCGATCTTTTTACTTCTATCACAAAGCAATAGTCAACGTTGAGTTGTCCATTTGCGATTATGGGTCTCCCTCATCGTGAATTGATGAGACATCGAGTGTGAAACTTTTTTTTAATAATGGGCAACATTTTTTTTATTTAGAATTTGTGGTGCATCTTGAAATCATCTTCAGGGTCTCGTCAACTCACGATGGTGTGGACTAGTAATTGCGAGTGGACTCTTAAGAAAAATTAATCGTCGGTTGGTGCTTTGCGACATAAGTAAAATGGTAGTTTTTTATTGTTTCAAAATTTGAGGCATTTGGTATTAGAACTAATAGAATGTATGTATAAATTAGAAGTTGAAATCTGAAAGCGAGTTAAACTTTTGGAAACAGAAAAAAGAAAACAAAATTGTTATACTCTCTATATTGAGTTTGTGATACAAAAAAGAGGAAAAGATAGGATCTGTTTCTCCTTTTAAGTTTTTTTTCTAAAATTAAATAGTTGGTTATTTTGCAGTTGTGATTAGTATATATCTTATTTATCAAGTATCGTTTTTTTTTTAAGACTATTTGGAAACAGGGGGTTTTATTTAATCAAACGTAGATTTCATACTTCTACTAATATCTAGTATGTATTTGACAGTATATTTACAATTTTTGTCAAAAATATAAAAAGTAAACAAACTGTTTACTGATATTTTGTATGAATTTGATATTATATTTACAATTTTTTCAAAATTTAATATTTACCCTTGATAGAAAACACCACTAAAAAACAAAAATATATTATGCTTAATTTTTTTATTAAGTATAAATATTTTATTTATTTTACTACTTTTTTATCATTTTCTTATTTCTTATTTATATTTATAATATGAAAATTAACAATCAAATTATTAGTTTAACCCTGCTTTAGCTTTGAATTTGTCTTTTTTTTTTTTTTTTTAAAAAATGTTTGATAGATTTTTAAACTGTAAACTTTTTCTCCAATGCATTTTTTTAACTTTAAATTTTGTGATTAATTAAACTTTAAATCTATAATTTTTTATCTAGTAGAGCTTTAAACTTTATAGATTTTGAAAATTTTGAGTATCGAAAATGTTCATACTTCTGTTCAAAACATCTAACATAACATGTCTCATATTATTAGGGTGTCTGAAATTATTAAGACTTTAAAATATTTACAAACTCTTATTTTAGTTCTTGATATAAAGAAAATTTGTTAGTGTTTAATCCAAGAAAATTTGTCAGTTTTGTTATATTTCAGATTTTTACTTTAGGAAACAACAAAGATCTGATCTGATCATTACTTTTGCACTAAAGAGAGAGACAAAGATTCCACTTCAGACTTTCTAAAACATCTGATTATTACTGTTTTTATTTTTTTAATTATAACTTTTTTTAGGCTTATTAATTATAAAATAAATATGTAAATATTTCTTTATTTTGGCTGTATTTGGACGTGAAGAAAGTTCACTGGCCCCCTACAACAAAATTATTCGTGGGTCAGTACTATAAGTTGTTTGTTTCGTTTTGAATATTTTTCTTGATTGAAAATTTGTTTTGGTACTTCTCTTTTTTAGAGAAATCATTATTCTGGTACTTCTTATGGAACTTTTTGAATTTTAGTTTATGTATTTTCATTAAATCCTAATATTAGTCAATAATACTTGTTTATTGTCACATTATTTTACTAACATTTATATAAATTCATGACAGAAAATTGTGTTTAAAATTTAAAACTTTTAAAAATTAACCGATATAGATATAAAATAATAAATTGTCGAAATAGAGATTTTAACTCTAAATACAAATTGATATTAACATGCTTTCAATTTTTTTTTTCTTTTTCCTTTATAATACAGAGCAAAATGAAGGGGCTGTTTTCAAGGTGTTTGGTACCTGCTTGCAATTAAGAAATTAAATCTTGGTGGCCCTTATACATTGGAGATCAGCACTATGATATGAGAAAATTGTTAATCTATCATATCTAATACCCTTTGGTATTCTATTTTATTTTTTTATTTTTATTTTTTAACTTTTTTGTTTTAGTTTTAAGAAAATAGAAAGAGAATAGATTGAATCAGTTGTTGTTGTTCTAATTTTAATGTGATGTAAAAAAGATTCATATAGAAATGTTGAGAGGTACTTACTATCTATCAATGAATTACAATGCATCATCACAT

mRNA sequence

GTGAAAACTGAAACACCCAAAAAGCTTCTCTAAACTTTTTGCTTTTTTTCTCTTACCTCTGATTTGCTCATCACTTTCTTTCTTTTTCCCTGCTTCCATTGCCCTAATCAGAACCTTCATATTCCTAAACAAATTTCTTCTAAAAGTCAAAAATATCCATTGCCTTCTCCTTCTTCTTCTCCTTCCTCATTCTCATCCTCCTCTCTTTCCCCTTTTTTCTTTCCCTTCTTCTTCTTCTTCTTCTCTCTCTTATGGAAGTCTCTATTTATTCAAACAGAAACAGTGGCCAAATCCACTTGCAACACCACCAAATCCCGGCGTTTGGAGACTGGGATAAGGCTAAAGATTTGCCGATCACTCAGTATTTCGAAACAGCTCGTCAAGCCGGTTTGATCCGCTACAGTTCCTCCTCCGGAGAAAGTGGCCCCTGCCTTCCTCCTTCCGACTTGTACTCCGCCGATCGGATGAAACCTCTGCCACTCCCCACCACCGCGCGCAAGGGACGGGTGAGGGAAAAGCGTTACCCGCATGTGGGATTAAAAGAACATCATCAAATTCCAATAAAGAAACAGCAAATGATGATGATGCAGCAAGGGGGGAGAGTGTTCGACGTGACGGAAACGGGGGGTGCCCGAAAGTTGAAGCAAAACGACCTGTCCTCCATTCCCCGTCCTCCGCCTAGATCTAATCTTACTACAATTCCTAAACCTGTTGATGAAGATCTCTACAAAATCCCACCTGAACTCCTCCATTCTTCTAAGCGGAGCAAAATGAAGGGGCTGTTTTCAAGGTGTTTGGTACCTGCTTGCAATTAAGAAATTAAATCTTGGTGGCCCTTATACATTGGAGATCAGCACTATGATATGAGAAAATTGTTAATCTATCATATCTAATACCCTTTGGTATTCTATTTTATTTTTTTATTTTTATTTTTTAACTTTTTTGTTTTAGTTTTAAGAAAATAGAAAGAGAATAGATTGAATCAGTTGTTGTTGTTCTAATTTTAATGTGATGTAAAAAAGATTCATATAGAAATGTTGAGAGGTACTTACTATCTATCAATGAATTACAATGCATCATCACAT

Coding sequence (CDS)

ATGGAAGTCTCTATTTATTCAAACAGAAACAGTGGCCAAATCCACTTGCAACACCACCAAATCCCGGCGTTTGGAGACTGGGATAAGGCTAAAGATTTGCCGATCACTCAGTATTTCGAAACAGCTCGTCAAGCCGGTTTGATCCGCTACAGTTCCTCCTCCGGAGAAAGTGGCCCCTGCCTTCCTCCTTCCGACTTGTACTCCGCCGATCGGATGAAACCTCTGCCACTCCCCACCACCGCGCGCAAGGGACGGGTGAGGGAAAAGCGTTACCCGCATGTGGGATTAAAAGAACATCATCAAATTCCAATAAAGAAACAGCAAATGATGATGATGCAGCAAGGGGGGAGAGTGTTCGACGTGACGGAAACGGGGGGTGCCCGAAAGTTGAAGCAAAACGACCTGTCCTCCATTCCCCGTCCTCCGCCTAGATCTAATCTTACTACAATTCCTAAACCTGTTGATGAAGATCTCTACAAAATCCCACCTGAACTCCTCCATTCTTCTAAGCGGAGCAAAATGAAGGGGCTGTTTTCAAGGTGTTTGGTACCTGCTTGCAATTAA

Protein sequence

MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPCLPPSDLYSADRMKPLPLPTTARKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFDVTETGGARKLKQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRSKMKGLFSRCLVPACN

Homology

[Close]

BLAST of MELO3C008671.1 vs. NCBI nr
Match: XP_008441806.1 (PREDICTED: uncharacterized protein LOC103485859 [Cucumis melo])

HSP 1 Score: 385.6 bits (989), Expect = 2.5e-103
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60
           MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC
Sbjct: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60

Query: 61  LPPSDLYSADRMKPLPLPTTARKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFD 120
           LPPSDLYSADRMKPLPLPTTARKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFD
Sbjct: 61  LPPSDLYSADRMKPLPLPTTARKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFD 120

Query: 121 VTETGGARKLKQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRSKMKGLFSR 180
           VTETGGARKLKQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRSKMKGLFSR
Sbjct: 121 VTETGGARKLKQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRSKMKGLFSR 180

Query: 181 CLVPACN 188
           CLVPACN
Sbjct: 181 CLVPACN 187

[Close]

BLAST of MELO3C008671.1 vs. NCBI nr
Match: XP_011649025.1 (uncharacterized protein LOC101218053 [Cucumis sativus] >KGN61322.1 hypothetical protein Csa_006309 [Cucumis sativus])

HSP 1 Score: 373.2 bits (957), Expect = 1.3e-99
Identity = 181/187 (96.79%), Postives = 183/187 (97.86%), Query Frame = 0


Query: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60
           MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC
Sbjct: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60

Query: 61  LPPSDLYSADRMKPLPLPTTARKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFD 120
            PPSDLYSADRMKP PLPTT RKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFD
Sbjct: 61  PPPSDLYSADRMKPPPLPTTVRKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFD 120

Query: 121 VTETGGARKLKQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRSKMKGLFSR 180
           VTETGGARKLKQND+SSI RPPPRSNLTTIPKPVDEDLYKIPPELLHSSKR+KMKGLFSR
Sbjct: 121 VTETGGARKLKQNDVSSISRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRNKMKGLFSR 180

Query: 181 CLVPACN 188
           CLVPACN
Sbjct: 181 CLVPACN 187

[Close]

BLAST of MELO3C008671.1 vs. NCBI nr
Match: TYK28677.1 (uncharacterized protein E5676_scaffold165G00480 [Cucumis melo var. makuwa])

HSP 1 Score: 351.3 bits (900), Expect = 5.2e-93
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60
           MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC
Sbjct: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60

Query: 61  LPPSDLYSADRMKPLPLPTTARKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFD 120
           LPPSDLYSADRMKPLPLPTTARKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFD
Sbjct: 61  LPPSDLYSADRMKPLPLPTTARKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFD 120

Query: 121 VTETGGARKLKQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKR 172
           VTETGGARKLKQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKR
Sbjct: 121 VTETGGARKLKQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKR 171

[Close]

BLAST of MELO3C008671.1 vs. NCBI nr
Match: KAA0061418.1 (uncharacterized protein E6C27_scaffold749G001170 [Cucumis melo var. makuwa])

HSP 1 Score: 348.2 bits (892), Expect = 4.4e-92
Identity = 170/171 (99.42%), Postives = 170/171 (99.42%), Query Frame = 0


Query: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60
           MEVSIYSNRNSGQIHLQH QIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC
Sbjct: 1   MEVSIYSNRNSGQIHLQHQQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60

Query: 61  LPPSDLYSADRMKPLPLPTTARKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFD 120
           LPPSDLYSADRMKPLPLPTTARKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFD
Sbjct: 61  LPPSDLYSADRMKPLPLPTTARKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFD 120

Query: 121 VTETGGARKLKQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKR 172
           VTETGGARKLKQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKR
Sbjct: 121 VTETGGARKLKQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKR 171

[Close]

BLAST of MELO3C008671.1 vs. NCBI nr
Match: XP_038889486.1 (uncharacterized protein LOC120079394 [Benincasa hispida])

HSP 1 Score: 321.6 bits (823), Expect = 4.4e-84
Identity = 162/189 (85.71%), Postives = 170/189 (89.95%), Query Frame = 0


Query: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60
           MEVS+YSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFE+ARQAGLIRYSSSSGESGPC
Sbjct: 1   MEVSVYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPC 60

Query: 61  LPPSDLYSADRMKPLPLPTTARKGRVREKRYPHVGLKEH--HQIPIKKQQMMMMQQGGRV 120
            PPSDLYSADR KP PL T  RKGRVREKR PHVGLKEH  +QIPIKKQQM    Q GRV
Sbjct: 61  FPPSDLYSADRKKPPPLATAGRKGRVREKRNPHVGLKEHNNNQIPIKKQQM----QQGRV 120

Query: 121 FDVTETGGARKLKQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRSKMKGLF 180
           FDVTETGGARKLKQND+ S+P PP RSN++  PKPVDEDLYKIPPELLHSSKR+KMKGLF
Sbjct: 121 FDVTETGGARKLKQNDV-SVPHPPARSNVSRPPKPVDEDLYKIPPELLHSSKRNKMKGLF 180

Query: 181 SRCLVPACN 188
           SRCLVPACN
Sbjct: 181 SRCLVPACN 184

[Close]

BLAST of MELO3C008671.1 vs. ExPASy TrEMBL
Match: A0A1S3B517 (uncharacterized protein LOC103485859 OS=Cucumis melo OX=3656 GN=LOC103485859 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.2e-103
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60
           MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC
Sbjct: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60

Query: 61  LPPSDLYSADRMKPLPLPTTARKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFD 120
           LPPSDLYSADRMKPLPLPTTARKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFD
Sbjct: 61  LPPSDLYSADRMKPLPLPTTARKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFD 120

Query: 121 VTETGGARKLKQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRSKMKGLFSR 180
           VTETGGARKLKQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRSKMKGLFSR
Sbjct: 121 VTETGGARKLKQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRSKMKGLFSR 180

Query: 181 CLVPACN 188
           CLVPACN
Sbjct: 181 CLVPACN 187

[Close]

BLAST of MELO3C008671.1 vs. ExPASy TrEMBL
Match: A0A0A0LKP3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G082200 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 6.2e-100
Identity = 181/187 (96.79%), Postives = 183/187 (97.86%), Query Frame = 0


Query: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60
           MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC
Sbjct: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60

Query: 61  LPPSDLYSADRMKPLPLPTTARKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFD 120
            PPSDLYSADRMKP PLPTT RKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFD
Sbjct: 61  PPPSDLYSADRMKPPPLPTTVRKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFD 120

Query: 121 VTETGGARKLKQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRSKMKGLFSR 180
           VTETGGARKLKQND+SSI RPPPRSNLTTIPKPVDEDLYKIPPELLHSSKR+KMKGLFSR
Sbjct: 121 VTETGGARKLKQNDVSSISRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRNKMKGLFSR 180

Query: 181 CLVPACN 188
           CLVPACN
Sbjct: 181 CLVPACN 187

[Close]

BLAST of MELO3C008671.1 vs. ExPASy TrEMBL
Match: A0A5D3DXR6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold165G00480 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.5e-93
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60
           MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC
Sbjct: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60

Query: 61  LPPSDLYSADRMKPLPLPTTARKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFD 120
           LPPSDLYSADRMKPLPLPTTARKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFD
Sbjct: 61  LPPSDLYSADRMKPLPLPTTARKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFD 120

Query: 121 VTETGGARKLKQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKR 172
           VTETGGARKLKQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKR
Sbjct: 121 VTETGGARKLKQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKR 171

[Close]

BLAST of MELO3C008671.1 vs. ExPASy TrEMBL
Match: A0A5A7V1J3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold749G001170 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.1e-92
Identity = 170/171 (99.42%), Postives = 170/171 (99.42%), Query Frame = 0


Query: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60
           MEVSIYSNRNSGQIHLQH QIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC
Sbjct: 1   MEVSIYSNRNSGQIHLQHQQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60

Query: 61  LPPSDLYSADRMKPLPLPTTARKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFD 120
           LPPSDLYSADRMKPLPLPTTARKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFD
Sbjct: 61  LPPSDLYSADRMKPLPLPTTARKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFD 120

Query: 121 VTETGGARKLKQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKR 172
           VTETGGARKLKQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKR
Sbjct: 121 VTETGGARKLKQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKR 171

[Close]

BLAST of MELO3C008671.1 vs. ExPASy TrEMBL
Match: A0A6J1HN41 (uncharacterized protein LOC111465695 OS=Cucurbita maxima OX=3661 GN=LOC111465695 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 5.8e-74
Identity = 146/187 (78.07%), Postives = 156/187 (83.42%), Query Frame = 0


Query: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60
           ME S Y  RNSGQIH+QHHQIPAFGDWDKA+DLPITQYFETARQAGLI YSSSSGE+GPC
Sbjct: 1   MESSDYLCRNSGQIHVQHHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPC 60

Query: 61  LPPSDLYSADRMKPLPLPTTARKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFD 120
           LP SDLYS DR KP PL   ARK RV EKRYP VGL + HQ P+KKQQ       GRVFD
Sbjct: 61  LPSSDLYSVDRKKP-PLSAAARKARVTEKRYPQVGLIKEHQTPLKKQQ-------GRVFD 120

Query: 121 VTETGGARKLKQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRSKMKGLFSR 180
           VTETGGARK KQND+ SIPR PP+SN T  P+PVDEDLYKIPPELLHSSKR+KMKGLFSR
Sbjct: 121 VTETGGARKFKQNDV-SIPRRPPKSNATKPPRPVDEDLYKIPPELLHSSKRNKMKGLFSR 178

Query: 181 CLVPACN 188
           CLVP+CN
Sbjct: 181 CLVPSCN 178

[Close]

BLAST of MELO3C008671.1 vs. TAIR 10
Match: AT5G18310.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 60 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 88.6 bits (218), Expect = 5.8e-18
Identity = 62/166 (37.35%), Postives = 88/166 (53.01%), Query Frame = 0


Query: 20  QIPAFGDWDKAKDLPITQYFETARQAGLIRYS-SSSGESGPCLPPSDLYSADRMKPLPLP 79
           QIP FG+W++A ++PITQYFE  RQAGLIR+  +++  +      S   S+   + L L 
Sbjct: 15  QIPRFGEWEEANEMPITQYFENPRQAGLIRHQYTTTSSASSTTTSSSSSSSSSAEALKLA 74

Query: 80  TTARKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFDVTETGGARKLKQNDLSSI 139
           +   + R    +    G KE    P ++ + +  Q      DV    G ++ K ND++  
Sbjct: 75  SHHPRPRHLHAQRQTAGTKEKRG-PQRRVRDVSAQSDKYYIDV---NGVKQFK-NDVALT 134

Query: 140 PRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRSKMKGLFSRCLVP 185
            +P         PKPVDEDLYKIPPE +HSS R K +  F  CLVP
Sbjct: 135 CKP---------PKPVDEDLYKIPPEFIHSSTR-KRRPSFLACLVP 165

[Close]

BLAST of MELO3C008671.1 vs. TAIR 10
Match: AT5G18310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-14
Identity = 54/165 (32.73%), Postives = 79/165 (47.88%), Query Frame = 0


Query: 20  QIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPCLPPSDLYSADRMKPLPLPT 79
           QIP FG+W++A ++PITQYFE  RQA  ++ +S                    +P  L  
Sbjct: 15  QIPRFGEWEEANEMPITQYFENPRQAEALKLAS-----------------HHPRPRHLHA 74

Query: 80  TARKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFDVTETGGARKLKQNDLSSIP 139
             +    +EKR P   +++            +  Q  + +   +  G ++ K ND++   
Sbjct: 75  QRQTAGTKEKRGPQRRVRD------------VSAQSDKYY--IDVNGVKQFK-NDVALTC 134

Query: 140 RPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRSKMKGLFSRCLVP 185
           +P         PKPVDEDLYKIPPE +HSS R K +  F  CLVP
Sbjct: 135 KP---------PKPVDEDLYKIPPEFIHSSTR-KRRPSFLACLVP 137

[Close]

BLAST of MELO3C008671.1 vs. TAIR 10
Match: AT5G48500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 58.5 bits (140), Expect = 6.5e-09
Identity = 55/182 (30.22%), Postives = 80/182 (43.96%), Query Frame = 0


Query: 12  GQIHLQHHQIPAFGDWDKAKDLPITQYFETA--RQAGLIRYSSSSGESGPCLPPSDLYSA 71
           G  + +   +PAFG WD    +P TQ FETA  +Q   + Y+S   +    L   DLY  
Sbjct: 7   GGEYCRRGHVPAFGSWDWNDAVPFTQCFETATTQQPAFLHYASYPQDRDLYL-AGDLYDN 66

Query: 72  DRM-KPLPLPTTARKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFDVTETGGAR 131
             +  P  +    R+ +V ++             P +K++ +  QQ     +  E     
Sbjct: 67  HHLVAPAVIIVPRRRAKVGQE-------------PAEKKRNVSKQQHNYKTEAREF---- 126

Query: 132 KLKQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRSKMK------GLFSRCL 185
               N   S P P  +  +   PKPVDEDLYK+ P+LL  S +SK K      G  SRC 
Sbjct: 127 ----NAPVSCPTPVVKRRMKA-PKPVDEDLYKVSPQLL--SVKSKRKRGGGGFGCISRCF 163

The following BLAST results are available for this feature:

BLAST of MELO3C008671.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441806.1	2.5e-103	100.00	PREDICTED: uncharacterized protein LOC103485859 [Cucumis melo]	[more]
XP_011649025.1	1.3e-99	96.79	uncharacterized protein LOC101218053 [Cucumis sativus] >KGN61322.1 hypothetical ...	[more]
TYK28677.1	5.2e-93	100.00	uncharacterized protein E5676_scaffold165G00480 [Cucumis melo var. makuwa]	[more]
KAA0061418.1	4.4e-92	99.42	uncharacterized protein E6C27_scaffold749G001170 [Cucumis melo var. makuwa]	[more]
XP_038889486.1	4.4e-84	85.71	uncharacterized protein LOC120079394 [Benincasa hispida]	[more]

BLAST of MELO3C008671.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C008671.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B517	1.2e-103	100.00	uncharacterized protein LOC103485859 OS=Cucumis melo OX=3656 GN=LOC103485859 PE=...	[more]
A0A0A0LKP3	6.2e-100	96.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G082200 PE=4 SV=1	[more]
A0A5D3DXR6	2.5e-93	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7V1J3	2.1e-92	99.42	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1HN41	5.8e-74	78.07	uncharacterized protein LOC111465695 OS=Cucurbita maxima OX=3661 GN=LOC111465695...	[more]

BLAST of MELO3C008671.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G18310.2	5.8e-18	37.35	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G18310.1	1.3e-14	32.73	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G48500.1	6.5e-09	30.22	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..151
None	No IPR available	PANTHER	PTHR33699:SF3	EXPRESSED PROTEIN	coord: 18..186
None	No IPR available	PANTHER	PTHR33699	EXPRESSED PROTEIN	coord: 18..186

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C008671	MELO3C008671	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C008671.1:exon:145623	MELO3C008671.1:exon:145623	exon
MELO3C008671.1:exon:145622	MELO3C008671.1:exon:145622	exon
MELO3C008671.1:exon:145621	MELO3C008671.1:exon:145621	exon
MELO3C008671.1:exon:145620	MELO3C008671.1:exon:145620	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C008671.1:three_prime_utr	MELO3C008671.1:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C008671.1:cds	MELO3C008671.1:cds	CDS
MELO3C008671.1:cds	MELO3C008671.1:cds_2	CDS
MELO3C008671.1:cds	MELO3C008671.1:cds_3	CDS
MELO3C008671.1:cds	MELO3C008671.1:cds_4	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C008671.1:five_prime_utr	MELO3C008671.1:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C008671.1	MELO3C008671.1-protein	polypeptide