Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonpolypeptideCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTAAAAAATTTACCCAAAATCATCCATTTGTAATTGTTTGAAGGAGTAGGTTTAGTAGATTTTTGAAGTCATTGTTCTTTTATTACATTTTAAATTAGAAAAAAACTAAATTAAAAAAGTTATCTCATCTCCATCTTCACCCTTCAGCATTCTTCACTCTTCTTTCGGTTCCGGAGGTTTCGCAGTCAAGGCTTCCCAAAACCCTCCAAATACCCTCATTAGCTCATTAATTTTACCAACCATGGCCACTTCACTCATCGCTGCCCTTTCTTCAAACCTAAAACTTCCTCTTCTCTCTGCAATTTCATCTTCCCCTTCAACCTTTCGACTCCAAACCCAAACCGTTCCATTTTCTAACTCCCCCTTCAAAATTCAGACCCTCTGGCTCAATCCCACAAGAAATTGTAATGTGTTATCGCATAATCGAAGTGGGTTTTTGATTTCGAGGAAATTGGAATCTTTTACCGTCTTTGCTGCAGATTCTGAAGCTCAAAGTGATGATAGAGAGGAGAGTACTCTGCCTGAACGGTTCAGGTACTTGACCAAAGAAGCTCCTGATCCTCCTGTGAGGTGGCCTTTCTTCGTGGGTAATTTTTTCTACTCTTTATGCTTTCTTTTTTCTTGGTTGTTTTAGATGATTCAGAATCTGTTCTGTTTTTGGTTTGTTGAATTTTAACCCTTCATGTCAGTTTAATCTGAAAAACTTGTTGGTGAGCTTGCGATAGTTAAATTTAGAGTAGAAGAGTTTTCCAAAGTTGTAGTTTTCGAAGAACAAATACTTTTACTATGCCGCCTAATTCATTTAAGAGTGTTGGTACTTGGTAAGATCCTAACATTGTTGATAAATCCTTTTGGATTTTTTTTTTTCATTTTAACAAGAACACCTGTATCTGCAATAGTTTCTAAGCTCTATAGTTTTGAATTTCACTGCTTAGGTTATGGTACCCCATAATCTGCCACCGCCTTTTCGTGATAAGGGCAAACTGCAAAGTTCTGTGGCATGCTAGTTTCTTTGCTATCTTATAGGATATTTGGATTGAGCGTTATAATTGGATCTTCAAACAAGTTACGACCTTACTTGAAAATTATCTGTTCCATAGGTTTTACAACTATGTCCTTGAGTTCTAAGTTCTAAGGATCTTTAGACTGGTTGAGAGACTTAATACCTCAATCTCTGGGCCTTTTTGTTATTACAATCTTAGTTTGGTTTTGTTGGATTTGGATCTTTTTTGTTGCTAGTTCTTGCGCTCTCATTTTTTGTTGGTTATTTTTTTTTTCGTATGTCCTTATTCATTTGTCTCTCAATAAAAGCTCAGTTTCTTACCGGAATAAAAAGGAGAAATTTTGGTATGGACGTGTGAGCGTGCTTGAAACTTGGACACTTTCCCTATTCCATATGTAATTAGCCTAAACCATTTAGCAAGTTTATGAGTTTTGTTTCCTTCAATCATTTTCACATGCTGGATTTGGATTCTGTCATGTATTTGAATCTGGTTCATGATAATTCCCATATGACGAGAAGAATTGGAAAGCTTGTGGATTAAGCTTAATCTTGTTCATAGTTCCCGTTGAGCCTCGCGCAAATATGGTATTTTTCTTTTGTCCCGAACCACATCTCCTCACAATATGAGCAGCTTTAGCAGCTTCTTTTTTTGCTTCCACTTCTGTTGTTAATCAGAATAATTCGATCTTTATTATATAAAAATTTGAGTTCTTTATCTTTCGATATCGTAATTGGAAGATGAGTTGCTTTTAAAATAACTACTTTTACCTTTATTTATGATGCAGCTCTACCATTTCTTCTCTATGCGTGGAGAGCAGTCTTGTTTGAACTTGGTAACTGGAGAAAGATTGTTGTTAGCCTCTTTAGCTTTGTGGCATCAATATTGAAAGGTGCCTTGGCCCTCATCCTCTATGTTATTGGAGATCCTATCACTTCTATGATAAGAGGCATTGAGACAGCTTTCTACACGATTCGATCATTCTACTCGAGCATAGTTGCATATGCTCCGATTCCTGAACTGACCACAATAATCGTACTAGCCTCAGCCATGCTTGCAATATCAGAAGCCAGTGCCCCTGATTCCGTCAGCAGTCAACCGTATCTTCTAACATTATCAGGCCTTGCTGGCTACTTAGCTGTGCGAGGTTACATTTCCGAGCCTTTCTTCTGGACAATTCTGTTGTGTGTATACGGTTACTCCAGCTTTGTCAAAAAGAGAAATGACGTAACTTCTGCGTTACCTGCTGCTGTTGTGTTTGCTGCCATTGGAGAACCATGGGTAAGAATCTTGGCTATGGGTTCATTTCTGGCTTTGGCCATTACTCACCATTGGAAGAAGCTTTCACAAGGAAAGAAGGAGGATGAAGATGAAAAGGGTGTGTATCGGTGGGATGTTCCCTTGCCTCTTTTGGGTGTAGCTTTAGCTATTGGAATTCATGCTGCTGCCAAATGGGCTGGATATAGGCACTTAACATGGATGATTGTATGAATACAAACACTTCAATTTTGATTTTAGCTTTCACAAGGATATTGATTTCAAAGAAGAGAAACTCTCTAATTTATCATTCAATGTATATTTTAAAATTTTCTGTCTTTCCAGTTTAATCATCTACAACTATGTTGATATGTAACGAATAATGGATAGAAGGAGTCGTACGTTAATTAGAAAGTGACAAACAAAGGATCTCACGTTAACATAGAATAATCTTTGAAAATTCAAATCTAAAATGAAAATTTTGGAAACTTGAAGTATGAAAATGATTCTAAAGAAGGAGCCAAAACAGACAGTTTCATGGATCCTTCAACTTGGAATTTATTGTGTTGGTTACTGTCATCTTTTTCTATTGCCCCAATTAATTCGATGAACCTTATGACCAAGTCACATTTAACTTTTCTCTTACAATAAAG
mRNA sequence
GGTAAAAAATTTACCCAAAATCATCCATTTGTAATTGTTTGAAGGAGTAGGTTTAGTAGATTTTTGAAGTCATTGTTCTTTTATTACATTTTAAATTAGAAAAAAACTAAATTAAAAAAGTTATCTCATCTCCATCTTCACCCTTCAGCATTCTTCACTCTTCTTTCGGTTCCGGAGGTTTCGCAGTCAAGGCTTCCCAAAACCCTCCAAATACCCTCATTAGCTCATTAATTTTACCAACCATGGCCACTTCACTCATCGCTGCCCTTTCTTCAAACCTAAAACTTCCTCTTCTCTCTGCAATTTCATCTTCCCCTTCAACCTTTCGACTCCAAACCCAAACCGTTCCATTTTCTAACTCCCCCTTCAAAATTCAGACCCTCTGGCTCAATCCCACAAGAAATTGTAATGTGTTATCGCATAATCGAAGTGGGTTTTTGATTTCGAGGAAATTGGAATCTTTTACCGTCTTTGCTGCAGATTCTGAAGCTCAAAGTGATGATAGAGAGGAGAGTACTCTGCCTGAACGGTTCAGGTACTTGACCAAAGAAGCTCCTGATCCTCCTGTGAGGTGGCCTTTCTTCGTGGCTCTACCATTTCTTCTCTATGCGTGGAGAGCAGTCTTGTTTGAACTTGGTAACTGGAGAAAGATTGTTGTTAGCCTCTTTAGCTTTGTGGCATCAATATTGAAAGGTGCCTTGGCCCTCATCCTCTATGTTATTGGAGATCCTATCACTTCTATGATAAGAGGCATTGAGACAGCTTTCTACACGATTCGATCATTCTACTCGAGCATAGTTGCATATGCTCCGATTCCTGAACTGACCACAATAATCGTACTAGCCTCAGCCATGCTTGCAATATCAGAAGCCAGTGCCCCTGATTCCGTCAGCAGTCAACCGTATCTTCTAACATTATCAGGCCTTGCTGGCTACTTAGCTGTGCGAGGTTACATTTCCGAGCCTTTCTTCTGGACAATTCTGTTGTGTGTATACGGTTACTCCAGCTTTGTCAAAAAGAGAAATGACGTAACTTCTGCGTTACCTGCTGCTGTTGTGTTTGCTGCCATTGGAGAACCATGGGTAAGAATCTTGGCTATGGGTTCATTTCTGGCTTTGGCCATTACTCACCATTGGAAGAAGCTTTCACAAGGAAAGAAGGAGGATGAAGATGAAAAGGGTGTGTATCGGTGGGATGTTCCCTTGCCTCTTTTGGGTGTAGCTTTAGCTATTGGAATTCATGCTGCTGCCAAATGGGCTGGATATAGGCACTTAACATGGATGATTGTATGAATACAAACACTTCAATTTTGATTTTAGCTTTCACAAGGATATTGATTTCAAAGAAGAGAAACTCTCTAATTTATCATTCAATGTATATTTTAAAATTTTCTGTCTTTCCAGTTTAATCATCTACAACTATGTTGATATGTAACGAATAATGGATAGAAGGAGTCGTACGTTAATTAGAAAGTGACAAACAAAGGATCTCACGTTAACATAGAATAATCTTTGAAAATTCAAATCTAAAATGAAAATTTTGGAAACTTGAAGTATGAAAATGATTCTAAAGAAGGAGCCAAAACAGACAGTTTCATGGATCCTTCAACTTGGAATTTATTGTGTTGGTTACTGTCATCTTTTTCTATTGCCCCAATTAATTCGATGAACCTTATGACCAAGTCACATTTAACTTTTCTCTTACAATAAAG
Coding sequence (CDS)
ATGGCCACTTCACTCATCGCTGCCCTTTCTTCAAACCTAAAACTTCCTCTTCTCTCTGCAATTTCATCTTCCCCTTCAACCTTTCGACTCCAAACCCAAACCGTTCCATTTTCTAACTCCCCCTTCAAAATTCAGACCCTCTGGCTCAATCCCACAAGAAATTGTAATGTGTTATCGCATAATCGAAGTGGGTTTTTGATTTCGAGGAAATTGGAATCTTTTACCGTCTTTGCTGCAGATTCTGAAGCTCAAAGTGATGATAGAGAGGAGAGTACTCTGCCTGAACGGTTCAGGTACTTGACCAAAGAAGCTCCTGATCCTCCTGTGAGGTGGCCTTTCTTCGTGGCTCTACCATTTCTTCTCTATGCGTGGAGAGCAGTCTTGTTTGAACTTGGTAACTGGAGAAAGATTGTTGTTAGCCTCTTTAGCTTTGTGGCATCAATATTGAAAGGTGCCTTGGCCCTCATCCTCTATGTTATTGGAGATCCTATCACTTCTATGATAAGAGGCATTGAGACAGCTTTCTACACGATTCGATCATTCTACTCGAGCATAGTTGCATATGCTCCGATTCCTGAACTGACCACAATAATCGTACTAGCCTCAGCCATGCTTGCAATATCAGAAGCCAGTGCCCCTGATTCCGTCAGCAGTCAACCGTATCTTCTAACATTATCAGGCCTTGCTGGCTACTTAGCTGTGCGAGGTTACATTTCCGAGCCTTTCTTCTGGACAATTCTGTTGTGTGTATACGGTTACTCCAGCTTTGTCAAAAAGAGAAATGACGTAACTTCTGCGTTACCTGCTGCTGTTGTGTTTGCTGCCATTGGAGAACCATGGGTAAGAATCTTGGCTATGGGTTCATTTCTGGCTTTGGCCATTACTCACCATTGGAAGAAGCTTTCACAAGGAAAGAAGGAGGATGAAGATGAAAAGGGTGTGTATCGGTGGGATGTTCCCTTGCCTCTTTTGGGTGTAGCTTTAGCTATTGGAATTCATGCTGCTGCCAAATGGGCTGGATATAGGCACTTAACATGGATGATTGTATGA
Protein sequence
MATSLIAALSSNLKLPLLSAISSSPSTFRLQTQTVPFSNSPFKIQTLWLNPTRNCNVLSHNRSGFLISRKLESFTVFAADSEAQSDDREESTLPERFRYLTKEAPDPPVRWPFFVALPFLLYAWRAVLFELGNWRKIVVSLFSFVASILKGALALILYVIGDPITSMIRGIETAFYTIRSFYSSIVAYAPIPELTTIIVLASAMLAISEASAPDSVSSQPYLLTLSGLAGYLAVRGYISEPFFWTILLCVYGYSSFVKKRNDVTSALPAAVVFAAIGEPWVRILAMGSFLALAITHHWKKLSQGKKEDEDEKGVYRWDVPLPLLGVALAIGIHAAAKWAGYRHLTWMIV
Homology
BLAST of MELO3C005833.jh1.t1 vs. NCBI nr
Match:
XP_008437523.1 (PREDICTED: uncharacterized protein LOC103482911 [Cucumis melo])
HSP 1 Score: 673 bits (1737), Expect = 1.07e-243
Identity = 348/349 (99.71%), Postives = 349/349 (100.00%), Query Frame = 0
Query: 1 MATSLIAALSSNLKLPLLSAISSSPSTFRLQTQTVPFSNSPFKIQTLWLNPTRNCNVLSH 60
MATSLIAALSSNLKLP+LSAISSSPSTFRLQTQTVPFSNSPFKIQTLWLNPTRNCNVLSH
Sbjct: 1 MATSLIAALSSNLKLPILSAISSSPSTFRLQTQTVPFSNSPFKIQTLWLNPTRNCNVLSH 60
Query: 61 NRSGFLISRKLESFTVFAADSEAQSDDREESTLPERFRYLTKEAPDPPVRWPFFVALPFL 120
NRSGFLISRKLESFTVFAADSEAQSDDREESTLPERFRYLTKEAPDPPVRWPFFVALPFL
Sbjct: 61 NRSGFLISRKLESFTVFAADSEAQSDDREESTLPERFRYLTKEAPDPPVRWPFFVALPFL 120
Query: 121 LYAWRAVLFELGNWRKIVVSLFSFVASILKGALALILYVIGDPITSMIRGIETAFYTIRS 180
LYAWRAVLFELGNWRKIVVSLFSFVASILKGALALILYVIGDPITSMIRGIETAFYTIRS
Sbjct: 121 LYAWRAVLFELGNWRKIVVSLFSFVASILKGALALILYVIGDPITSMIRGIETAFYTIRS 180
Query: 181 FYSSIVAYAPIPELTTIIVLASAMLAISEASAPDSVSSQPYLLTLSGLAGYLAVRGYISE 240
FYSSIVAYAPIPELTTIIVLASAMLAISEASAPDSVSSQPYLLTLSGLAGYLAVRGYISE
Sbjct: 181 FYSSIVAYAPIPELTTIIVLASAMLAISEASAPDSVSSQPYLLTLSGLAGYLAVRGYISE 240
Query: 241 PFFWTILLCVYGYSSFVKKRNDVTSALPAAVVFAAIGEPWVRILAMGSFLALAITHHWKK 300
PFFWTILLCVYGYSSFVKKRNDVTSALPAAVVFAAIGEPWVRILAMGSFLALAITHHWKK
Sbjct: 241 PFFWTILLCVYGYSSFVKKRNDVTSALPAAVVFAAIGEPWVRILAMGSFLALAITHHWKK 300
Query: 301 LSQGKKEDEDEKGVYRWDVPLPLLGVALAIGIHAAAKWAGYRHLTWMIV 349
LSQGKKEDEDEKGVYRWDVPLPLLGVALAIGIHAAAKWAGYRHLTWMIV
Sbjct: 301 LSQGKKEDEDEKGVYRWDVPLPLLGVALAIGIHAAAKWAGYRHLTWMIV 349
BLAST of MELO3C005833.jh1.t1 vs. NCBI nr
Match:
KAA0042600.1 (Embryo defective 1923 [Cucumis melo var. makuwa] >TYK06002.1 Embryo defective 1923 [Cucumis melo var. makuwa])
HSP 1 Score: 642 bits (1657), Expect = 2.41e-231
Identity = 342/360 (95.00%), Postives = 343/360 (95.28%), Query Frame = 0
Query: 1 MATSLIAALSSNLKLPLLSAISSSPSTFRLQTQTVPFSNSPFKIQTLWLNPTRNCNVLSH 60
MATSLIAALSSNLKLPLLSAISSSPSTFRLQTQTVPFSNSPFKIQTLWLNPTRNCNVLSH
Sbjct: 1 MATSLIAALSSNLKLPLLSAISSSPSTFRLQTQTVPFSNSPFKIQTLWLNPTRNCNVLSH 60
Query: 61 NRSGFLISRKLESFTVFAADSEAQSDDREESTLPERFRYLTKEAPDPPVRWPFFV----- 120
NRSGFLISRKLESFTVFAADSEAQSDDREESTLPERFRYLTKEAPDPPV P +
Sbjct: 61 NRSGFLISRKLESFTVFAADSEAQSDDREESTLPERFRYLTKEAPDPPVMVPHNLPPPFR 120
Query: 121 ------ALPFLLYAWRAVLFELGNWRKIVVSLFSFVASILKGALALILYVIGDPITSMIR 180
LPFLLYAWRAVLFELGNWRKIVVSLFSFVASILKGALALILYVIGDPITSMIR
Sbjct: 121 DKGKLQTLPFLLYAWRAVLFELGNWRKIVVSLFSFVASILKGALALILYVIGDPITSMIR 180
Query: 181 GIETAFYTIRSFYSSIVAYAPIPELTTIIVLASAMLAISEASAPDSVSSQPYLLTLSGLA 240
GIETAFYTIRSFYSSIVAYAPIPELTTIIVLASAMLAISEASAPDSVSSQPYLLTLSGLA
Sbjct: 181 GIETAFYTIRSFYSSIVAYAPIPELTTIIVLASAMLAISEASAPDSVSSQPYLLTLSGLA 240
Query: 241 GYLAVRGYISEPFFWTILLCVYGYSSFVKKRNDVTSALPAAVVFAAIGEPWVRILAMGSF 300
GYLAVRGYISEPFFWTILLCVYGYSSFVKKRNDVTSALPAAVVFAAIGEPWVRILAMGSF
Sbjct: 241 GYLAVRGYISEPFFWTILLCVYGYSSFVKKRNDVTSALPAAVVFAAIGEPWVRILAMGSF 300
Query: 301 LALAITHHWKKLSQGKKEDEDEKGVYRWDVPLPLLGVALAIGIHAAAKWAGYRHLTWMIV 349
LALAITHHWKKLSQGK EDEDEKGVYRWDVPLPLLGVALAIGIHAAAKWAGYRHLTWMIV
Sbjct: 301 LALAITHHWKKLSQGK-EDEDEKGVYRWDVPLPLLGVALAIGIHAAAKWAGYRHLTWMIV 359
BLAST of MELO3C005833.jh1.t1 vs. NCBI nr
Match:
XP_004145896.1 (uncharacterized protein LOC101214502 [Cucumis sativus] >KGN49929.1 hypothetical protein Csa_000112 [Cucumis sativus])
HSP 1 Score: 621 bits (1601), Expect = 5.27e-223
Identity = 319/349 (91.40%), Postives = 332/349 (95.13%), Query Frame = 0
Query: 1 MATSLIAALSSNLKLPLLSAISSSPSTFRLQTQTVPFSNSPFKIQTLWLNPTRNCNVLSH 60
MAT+LIA+LSSNLKLPLLSAISSSPSTFR QTQTVPFSNSP IQTLWLNPTRNCNV+SH
Sbjct: 1 MATTLIASLSSNLKLPLLSAISSSPSTFRRQTQTVPFSNSP--IQTLWLNPTRNCNVISH 60
Query: 61 NRSGFLISRKLESFTVFAADSEAQSDDREESTLPERFRYLTKEAPDPPVRWPFFVALPFL 120
NRSGFLISRKLESFTVFAAD EAQSDDREEST+PERFRYL KE DPPVRWPFFVALPFL
Sbjct: 61 NRSGFLISRKLESFTVFAADFEAQSDDREESTMPERFRYLAKEGSDPPVRWPFFVALPFL 120
Query: 121 LYAWRAVLFELGNWRKIVVSLFSFVASILKGALALILYVIGDPITSMIRGIETAFYTIRS 180
LYAWRAVLFELGNWRKIVV+L FV S+LKGALALILYVIGDPITS+IRGIETAFYTIRS
Sbjct: 121 LYAWRAVLFELGNWRKIVVNLVGFVVSLLKGALALILYVIGDPITSVIRGIETAFYTIRS 180
Query: 181 FYSSIVAYAPIPELTTIIVLASAMLAISEASAPDSVSSQPYLLTLSGLAGYLAVRGYISE 240
F+SSIVAYAP+ ELTTII+LAS +LAISEASAPDSV SQPYLLTLSGLAGY AVRGYISE
Sbjct: 181 FHSSIVAYAPVSELTTIIILASTVLAISEASAPDSVRSQPYLLTLSGLAGYAAVRGYISE 240
Query: 241 PFFWTILLCVYGYSSFVKKRNDVTSALPAAVVFAAIGEPWVRILAMGSFLALAITHHWKK 300
PFFWTILLCVYGYSSFVKKRNDV+SALPAA VFAAIGEPWVRILAMGSFLALAITHHWK
Sbjct: 241 PFFWTILLCVYGYSSFVKKRNDVSSALPAAAVFAAIGEPWVRILAMGSFLALAITHHWKN 300
Query: 301 LSQGKKEDEDEKGVYRWDVPLPLLGVALAIGIHAAAKWAGYRHLTWMIV 349
LSQGKKEDEDEKGVYRWD+PLPLLGVALAIGIH AAKWAGYRHLTWMIV
Sbjct: 301 LSQGKKEDEDEKGVYRWDIPLPLLGVALAIGIHGAAKWAGYRHLTWMIV 347
BLAST of MELO3C005833.jh1.t1 vs. NCBI nr
Match:
XP_038906583.1 (uncharacterized protein LOC120092540 isoform X1 [Benincasa hispida])
HSP 1 Score: 592 bits (1527), Expect = 1.15e-211
Identity = 307/351 (87.46%), Postives = 319/351 (90.88%), Query Frame = 0
Query: 1 MATSLIAALSSNLKLPLLSAISSSPSTFRLQTQTVPFSNSPFKIQTLWLNPTRNCNVLSH 60
MAT+LI+ LSSNLK PLLSAISSSP T R QTQ PFSN PFKIQ LWLNP RN NVLSH
Sbjct: 1 MATTLISGLSSNLKPPLLSAISSSPLTLRPQTQNAPFSNFPFKIQNLWLNPARNSNVLSH 60
Query: 61 NRSGFLISRKLESFTVFAADSEAQSDDREESTLPERFRYLTKEAPDPPVRWPFFVALPFL 120
NRSGFLISRKLESFTVFA DSEAQ+DDR EST+PERFRYLTKEAPDPPVRWPFFVAL F+
Sbjct: 61 NRSGFLISRKLESFTVFAGDSEAQNDDRGESTMPERFRYLTKEAPDPPVRWPFFVALAFI 120
Query: 121 LYAWRAVLFELGNWRKIVVSLFSFVASILKGALALILYVIGDPITSMIRGIETAFYTIRS 180
LYAWRAVLFEL NWRK V +F FV ILKGALAL+LYVIGDPITSMIRGIETAFYTIRS
Sbjct: 121 LYAWRAVLFELANWRKAVFGVFGFVGYILKGALALVLYVIGDPITSMIRGIETAFYTIRS 180
Query: 181 FYSSIVAYAPIPELTTIIVLASAMLAISEASAPDSVSSQPYLLTLSGLAGYLAVRGYISE 240
FYS IVAYAPIPELTTII+LAS +LAISEASAPDSVSSQPYLLT+SGLAGY VRGYISE
Sbjct: 181 FYSGIVAYAPIPELTTIIILASTVLAISEASAPDSVSSQPYLLTISGLAGYTVVRGYISE 240
Query: 241 PFFWTILLCVYGYSSFVKKRNDVTSALPAAVVFAAIGEPWVRILAMGSFLALAITHHWKK 300
PFFWTILLCVYG+S FVKKRNDVTSALP A VFAAIGEPWVRILAMGSFLALAI HHWKK
Sbjct: 241 PFFWTILLCVYGFSRFVKKRNDVTSALPVAAVFAAIGEPWVRILAMGSFLALAIAHHWKK 300
Query: 301 LSQGKKEDE--DEKGVYRWDVPLPLLGVALAIGIHAAAKWAGYRHLTWMIV 349
LSQGKKEDE DEKGVY+ DVPLPLLGVALAIGIHAAAKWAGYRHLTWMIV
Sbjct: 301 LSQGKKEDEYEDEKGVYQRDVPLPLLGVALAIGIHAAAKWAGYRHLTWMIV 351
BLAST of MELO3C005833.jh1.t1 vs. NCBI nr
Match:
XP_023549679.1 (uncharacterized protein LOC111808104 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 537 bits (1384), Expect = 5.70e-190
Identity = 278/349 (79.66%), Postives = 303/349 (86.82%), Query Frame = 0
Query: 1 MATSLIAALSSNLKLPLLSAISSSPSTFRLQTQTVPFSNSPFKIQTLWLNPTRNCNVLSH 60
MAT+LIA LSS LKLPLL++ISSSP FR ++Q V F +SP+KI T+W PTRNCNVLSH
Sbjct: 1 MATALIAGLSSTLKLPLLTSISSSPLKFRPKSQNVQFCSSPYKIHTIWNKPTRNCNVLSH 60
Query: 61 NRSGFLISRKLESFTVFAADSEAQSDDREESTLPERFRYLTKEAPDPPVRWPFFVALPFL 120
N SGFLISR L FTV A E Q+DDREE T+PERFRYLTKEAPDPPVRWPFFVAL F+
Sbjct: 61 NLSGFLISRSLGPFTVSAGAVEPQNDDREEGTMPERFRYLTKEAPDPPVRWPFFVALAFI 120
Query: 121 LYAWRAVLFELGNWRKIVVSLFSFVASILKGALALILYVIGDPITSMIRGIETAFYTIRS 180
LYAWRAV FELGNWRK V+ +F+FV ILKGALALILYVIGDPITSMIRGIET FYTIRS
Sbjct: 121 LYAWRAVFFELGNWRKAVLCIFNFVGYILKGALALILYVIGDPITSMIRGIETTFYTIRS 180
Query: 181 FYSSIVAYAPIPELTTIIVLASAMLAISEASAPDSVSSQPYLLTLSGLAGYLAVRGYISE 240
FYSSIVAYAP+PELTT+I+LAS ++AISEAS PDSVS+QPYLLTLSGLA Y AVR YISE
Sbjct: 181 FYSSIVAYAPVPELTTLIILASTVVAISEASVPDSVSTQPYLLTLSGLASYAAVRAYISE 240
Query: 241 PFFWTILLCVYGYSSFVKKRNDVTSALPAAVVFAAIGEPWVRILAMGSFLALAITHHWKK 300
PFFWTILL VY +S FVKKRNDVTSALPAA VFAAIGEPWVRILAMGSF+ LAI HHWKK
Sbjct: 241 PFFWTILLGVYSFSKFVKKRNDVTSALPAAAVFAAIGEPWVRILAMGSFMGLAIWHHWKK 300
Query: 301 LSQGKKEDEDEKGVYRWDVPLPLLGVALAIGIHAAAKWAGYRHLTWMIV 349
+SQGK E E+GVY DVP+PLLG ALAIGIHAAAKWAGYRHLTWMIV
Sbjct: 301 VSQGK---EREEGVYERDVPVPLLGAALAIGIHAAAKWAGYRHLTWMIV 346
BLAST of MELO3C005833.jh1.t1 vs. ExPASy TrEMBL
Match:
A0A1S3ATW7 (uncharacterized protein LOC103482911 OS=Cucumis melo OX=3656 GN=LOC103482911 PE=4 SV=1)
HSP 1 Score: 673 bits (1737), Expect = 5.17e-244
Identity = 348/349 (99.71%), Postives = 349/349 (100.00%), Query Frame = 0
Query: 1 MATSLIAALSSNLKLPLLSAISSSPSTFRLQTQTVPFSNSPFKIQTLWLNPTRNCNVLSH 60
MATSLIAALSSNLKLP+LSAISSSPSTFRLQTQTVPFSNSPFKIQTLWLNPTRNCNVLSH
Sbjct: 1 MATSLIAALSSNLKLPILSAISSSPSTFRLQTQTVPFSNSPFKIQTLWLNPTRNCNVLSH 60
Query: 61 NRSGFLISRKLESFTVFAADSEAQSDDREESTLPERFRYLTKEAPDPPVRWPFFVALPFL 120
NRSGFLISRKLESFTVFAADSEAQSDDREESTLPERFRYLTKEAPDPPVRWPFFVALPFL
Sbjct: 61 NRSGFLISRKLESFTVFAADSEAQSDDREESTLPERFRYLTKEAPDPPVRWPFFVALPFL 120
Query: 121 LYAWRAVLFELGNWRKIVVSLFSFVASILKGALALILYVIGDPITSMIRGIETAFYTIRS 180
LYAWRAVLFELGNWRKIVVSLFSFVASILKGALALILYVIGDPITSMIRGIETAFYTIRS
Sbjct: 121 LYAWRAVLFELGNWRKIVVSLFSFVASILKGALALILYVIGDPITSMIRGIETAFYTIRS 180
Query: 181 FYSSIVAYAPIPELTTIIVLASAMLAISEASAPDSVSSQPYLLTLSGLAGYLAVRGYISE 240
FYSSIVAYAPIPELTTIIVLASAMLAISEASAPDSVSSQPYLLTLSGLAGYLAVRGYISE
Sbjct: 181 FYSSIVAYAPIPELTTIIVLASAMLAISEASAPDSVSSQPYLLTLSGLAGYLAVRGYISE 240
Query: 241 PFFWTILLCVYGYSSFVKKRNDVTSALPAAVVFAAIGEPWVRILAMGSFLALAITHHWKK 300
PFFWTILLCVYGYSSFVKKRNDVTSALPAAVVFAAIGEPWVRILAMGSFLALAITHHWKK
Sbjct: 241 PFFWTILLCVYGYSSFVKKRNDVTSALPAAVVFAAIGEPWVRILAMGSFLALAITHHWKK 300
Query: 301 LSQGKKEDEDEKGVYRWDVPLPLLGVALAIGIHAAAKWAGYRHLTWMIV 349
LSQGKKEDEDEKGVYRWDVPLPLLGVALAIGIHAAAKWAGYRHLTWMIV
Sbjct: 301 LSQGKKEDEDEKGVYRWDVPLPLLGVALAIGIHAAAKWAGYRHLTWMIV 349
BLAST of MELO3C005833.jh1.t1 vs. ExPASy TrEMBL
Match:
A0A5A7TGY5 (Embryo defective 1923 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001000 PE=4 SV=1)
HSP 1 Score: 642 bits (1657), Expect = 1.17e-231
Identity = 342/360 (95.00%), Postives = 343/360 (95.28%), Query Frame = 0
Query: 1 MATSLIAALSSNLKLPLLSAISSSPSTFRLQTQTVPFSNSPFKIQTLWLNPTRNCNVLSH 60
MATSLIAALSSNLKLPLLSAISSSPSTFRLQTQTVPFSNSPFKIQTLWLNPTRNCNVLSH
Sbjct: 1 MATSLIAALSSNLKLPLLSAISSSPSTFRLQTQTVPFSNSPFKIQTLWLNPTRNCNVLSH 60
Query: 61 NRSGFLISRKLESFTVFAADSEAQSDDREESTLPERFRYLTKEAPDPPVRWPFFV----- 120
NRSGFLISRKLESFTVFAADSEAQSDDREESTLPERFRYLTKEAPDPPV P +
Sbjct: 61 NRSGFLISRKLESFTVFAADSEAQSDDREESTLPERFRYLTKEAPDPPVMVPHNLPPPFR 120
Query: 121 ------ALPFLLYAWRAVLFELGNWRKIVVSLFSFVASILKGALALILYVIGDPITSMIR 180
LPFLLYAWRAVLFELGNWRKIVVSLFSFVASILKGALALILYVIGDPITSMIR
Sbjct: 121 DKGKLQTLPFLLYAWRAVLFELGNWRKIVVSLFSFVASILKGALALILYVIGDPITSMIR 180
Query: 181 GIETAFYTIRSFYSSIVAYAPIPELTTIIVLASAMLAISEASAPDSVSSQPYLLTLSGLA 240
GIETAFYTIRSFYSSIVAYAPIPELTTIIVLASAMLAISEASAPDSVSSQPYLLTLSGLA
Sbjct: 181 GIETAFYTIRSFYSSIVAYAPIPELTTIIVLASAMLAISEASAPDSVSSQPYLLTLSGLA 240
Query: 241 GYLAVRGYISEPFFWTILLCVYGYSSFVKKRNDVTSALPAAVVFAAIGEPWVRILAMGSF 300
GYLAVRGYISEPFFWTILLCVYGYSSFVKKRNDVTSALPAAVVFAAIGEPWVRILAMGSF
Sbjct: 241 GYLAVRGYISEPFFWTILLCVYGYSSFVKKRNDVTSALPAAVVFAAIGEPWVRILAMGSF 300
Query: 301 LALAITHHWKKLSQGKKEDEDEKGVYRWDVPLPLLGVALAIGIHAAAKWAGYRHLTWMIV 349
LALAITHHWKKLSQGK EDEDEKGVYRWDVPLPLLGVALAIGIHAAAKWAGYRHLTWMIV
Sbjct: 301 LALAITHHWKKLSQGK-EDEDEKGVYRWDVPLPLLGVALAIGIHAAAKWAGYRHLTWMIV 359
BLAST of MELO3C005833.jh1.t1 vs. ExPASy TrEMBL
Match:
A0A0A0KM42 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G141030 PE=4 SV=1)
HSP 1 Score: 621 bits (1601), Expect = 2.55e-223
Identity = 319/349 (91.40%), Postives = 332/349 (95.13%), Query Frame = 0
Query: 1 MATSLIAALSSNLKLPLLSAISSSPSTFRLQTQTVPFSNSPFKIQTLWLNPTRNCNVLSH 60
MAT+LIA+LSSNLKLPLLSAISSSPSTFR QTQTVPFSNSP IQTLWLNPTRNCNV+SH
Sbjct: 1 MATTLIASLSSNLKLPLLSAISSSPSTFRRQTQTVPFSNSP--IQTLWLNPTRNCNVISH 60
Query: 61 NRSGFLISRKLESFTVFAADSEAQSDDREESTLPERFRYLTKEAPDPPVRWPFFVALPFL 120
NRSGFLISRKLESFTVFAAD EAQSDDREEST+PERFRYL KE DPPVRWPFFVALPFL
Sbjct: 61 NRSGFLISRKLESFTVFAADFEAQSDDREESTMPERFRYLAKEGSDPPVRWPFFVALPFL 120
Query: 121 LYAWRAVLFELGNWRKIVVSLFSFVASILKGALALILYVIGDPITSMIRGIETAFYTIRS 180
LYAWRAVLFELGNWRKIVV+L FV S+LKGALALILYVIGDPITS+IRGIETAFYTIRS
Sbjct: 121 LYAWRAVLFELGNWRKIVVNLVGFVVSLLKGALALILYVIGDPITSVIRGIETAFYTIRS 180
Query: 181 FYSSIVAYAPIPELTTIIVLASAMLAISEASAPDSVSSQPYLLTLSGLAGYLAVRGYISE 240
F+SSIVAYAP+ ELTTII+LAS +LAISEASAPDSV SQPYLLTLSGLAGY AVRGYISE
Sbjct: 181 FHSSIVAYAPVSELTTIIILASTVLAISEASAPDSVRSQPYLLTLSGLAGYAAVRGYISE 240
Query: 241 PFFWTILLCVYGYSSFVKKRNDVTSALPAAVVFAAIGEPWVRILAMGSFLALAITHHWKK 300
PFFWTILLCVYGYSSFVKKRNDV+SALPAA VFAAIGEPWVRILAMGSFLALAITHHWK
Sbjct: 241 PFFWTILLCVYGYSSFVKKRNDVSSALPAAAVFAAIGEPWVRILAMGSFLALAITHHWKN 300
Query: 301 LSQGKKEDEDEKGVYRWDVPLPLLGVALAIGIHAAAKWAGYRHLTWMIV 349
LSQGKKEDEDEKGVYRWD+PLPLLGVALAIGIH AAKWAGYRHLTWMIV
Sbjct: 301 LSQGKKEDEDEKGVYRWDIPLPLLGVALAIGIHGAAKWAGYRHLTWMIV 347
BLAST of MELO3C005833.jh1.t1 vs. ExPASy TrEMBL
Match:
A0A6J1IBT2 (uncharacterized protein LOC111471530 OS=Cucurbita maxima OX=3661 GN=LOC111471530 PE=4 SV=1)
HSP 1 Score: 535 bits (1377), Expect = 3.21e-189
Identity = 275/349 (78.80%), Postives = 303/349 (86.82%), Query Frame = 0
Query: 1 MATSLIAALSSNLKLPLLSAISSSPSTFRLQTQTVPFSNSPFKIQTLWLNPTRNCNVLSH 60
MAT+LIA LSS LKLPLL+AISSSP FR ++Q V F +SP+KI T+W PTRNCNVLSH
Sbjct: 1 MATALIAGLSSTLKLPLLTAISSSPLNFRPKSQNVQFCSSPYKIHTIWNKPTRNCNVLSH 60
Query: 61 NRSGFLISRKLESFTVFAADSEAQSDDREESTLPERFRYLTKEAPDPPVRWPFFVALPFL 120
N SGFLISR L SFT A E Q++DREE T+PERFRYLTKEAPDPPVRWPFFVAL F+
Sbjct: 61 NLSGFLISRSLGSFTASAGAVEPQNNDREEGTMPERFRYLTKEAPDPPVRWPFFVALAFI 120
Query: 121 LYAWRAVLFELGNWRKIVVSLFSFVASILKGALALILYVIGDPITSMIRGIETAFYTIRS 180
LYAWRAV FELGNWRK V+ +F+FV ILKGALALILYVIGDPITSMIRGIET FYTIRS
Sbjct: 121 LYAWRAVFFELGNWRKAVLCIFNFVGYILKGALALILYVIGDPITSMIRGIETTFYTIRS 180
Query: 181 FYSSIVAYAPIPELTTIIVLASAMLAISEASAPDSVSSQPYLLTLSGLAGYLAVRGYISE 240
FYSS+VAYAP+PELTT+I+LAS ++AISEAS PDSVS+QPYLLTLSGLAGY AVR YISE
Sbjct: 181 FYSSVVAYAPVPELTTLIILASTVVAISEASVPDSVSTQPYLLTLSGLAGYTAVRAYISE 240
Query: 241 PFFWTILLCVYGYSSFVKKRNDVTSALPAAVVFAAIGEPWVRILAMGSFLALAITHHWKK 300
PFFWT LL VY +S FVKKR+DVTSALPAA VFAAIGEPWVRILAMGSF+ LAI HHWKK
Sbjct: 241 PFFWTFLLGVYSFSKFVKKRDDVTSALPAAAVFAAIGEPWVRILAMGSFMGLAIWHHWKK 300
Query: 301 LSQGKKEDEDEKGVYRWDVPLPLLGVALAIGIHAAAKWAGYRHLTWMIV 349
+SQGK E E+G+Y DVP+PLLG ALAIGIHAAAKWAGYRHLTWMIV
Sbjct: 301 VSQGK---EREEGMYERDVPVPLLGAALAIGIHAAAKWAGYRHLTWMIV 346
BLAST of MELO3C005833.jh1.t1 vs. ExPASy TrEMBL
Match:
A0A6J1E6L3 (uncharacterized protein LOC111430430 OS=Cucurbita moschata OX=3662 GN=LOC111430430 PE=4 SV=1)
HSP 1 Score: 533 bits (1374), Expect = 9.19e-189
Identity = 276/349 (79.08%), Postives = 302/349 (86.53%), Query Frame = 0
Query: 1 MATSLIAALSSNLKLPLLSAISSSPSTFRLQTQTVPFSNSPFKIQTLWLNPTRNCNVLSH 60
MAT+LIA LSS LKLPLL+AISSSP FR ++Q V F +SP KI T+W PTRNCNVLSH
Sbjct: 1 MATALIAGLSSTLKLPLLTAISSSPLNFRPKSQNVQFCSSPCKIHTIWNKPTRNCNVLSH 60
Query: 61 NRSGFLISRKLESFTVFAADSEAQSDDREESTLPERFRYLTKEAPDPPVRWPFFVALPFL 120
N SGFLISR L FTV A E Q+DDREE T+PERFRYLTKEAPDPPVRWPFFVAL F+
Sbjct: 61 NLSGFLISRSLGPFTVSAGAVEPQNDDREEGTMPERFRYLTKEAPDPPVRWPFFVALAFI 120
Query: 121 LYAWRAVLFELGNWRKIVVSLFSFVASILKGALALILYVIGDPITSMIRGIETAFYTIRS 180
LYAW+AV FELGNWRK V+ +F+FV ILKGALALILYVIGDPITSMIRGIET FYTIRS
Sbjct: 121 LYAWKAVFFELGNWRKAVLCIFNFVGYILKGALALILYVIGDPITSMIRGIETTFYTIRS 180
Query: 181 FYSSIVAYAPIPELTTIIVLASAMLAISEASAPDSVSSQPYLLTLSGLAGYLAVRGYISE 240
FYSS+VAYAP+PELTT+I+LAS ++AISEAS PDSVS+QPYLLTLSGLA Y AVR YISE
Sbjct: 181 FYSSVVAYAPVPELTTLIILASTVVAISEASVPDSVSTQPYLLTLSGLASYAAVRAYISE 240
Query: 241 PFFWTILLCVYGYSSFVKKRNDVTSALPAAVVFAAIGEPWVRILAMGSFLALAITHHWKK 300
PFFWTILL VY +S FVKKR+DVTSALPAA VFAAIGEPWVRILAMGSF+ LAI HHWKK
Sbjct: 241 PFFWTILLGVYSFSKFVKKRDDVTSALPAAAVFAAIGEPWVRILAMGSFMGLAIWHHWKK 300
Query: 301 LSQGKKEDEDEKGVYRWDVPLPLLGVALAIGIHAAAKWAGYRHLTWMIV 349
+SQGK E E+GVY DVP+PLLG ALAIGIHAAAKWAGYRHLTWMIV
Sbjct: 301 VSQGK---EREEGVYERDVPVPLLGAALAIGIHAAAKWAGYRHLTWMIV 346
BLAST of MELO3C005833.jh1.t1 vs. TAIR 10
Match:
AT4G28210.1 (embryo defective 1923 )
HSP 1 Score: 334.7 bits (857), Expect = 8.7e-92
Identity = 164/270 (60.74%), Postives = 211/270 (78.15%), Query Frame = 0
Query: 80 DSEAQSDDREESTLPERFRYLTKEAPDPPVRWPFFVALPFLLYAWRAVLFELGNWRKIVV 139
+ +A+ R EST+P+RFRYLTKEAPD P+ WP+FVAL FL+YAWRAVLFEL NWRK
Sbjct: 84 EDDAERFARRESTMPDRFRYLTKEAPDSPIIWPWFVALGFLVYAWRAVLFELSNWRKAAF 143
Query: 140 SLFSFVASILKGALALILYVIGDPITSMIRGIETAFYTIRSFYSSIVAYAPIPELTTIIV 199
++ +FV + K ALAL+ + IGDPITS+I +ETA Y++R+FYS IVAY P+ ELTT+I+
Sbjct: 144 AILAFVGDLSKFALALVFHFIGDPITSLISLVETAMYSVRAFYSGIVAYTPVRELTTVIL 203
Query: 200 LASAMLAISEASAPDSVSSQPYLLTLSGLAGYLAVRGYISEPFFWTILLCVYGYSSFVKK 259
LAS++LAI EA AP+S+S QPY++T++GL GY AV+ YISEPFFWT+LL +YGYS +KK
Sbjct: 204 LASSVLAIGEAVAPESISKQPYVVTIAGLVGYAAVQSYISEPFFWTVLLGLYGYSRLIKK 263
Query: 260 RNDVTSALPAAVVFAAIGEPWVRILAMGSFLALAITHHWKKLSQGKKEDEDEKGVYRWDV 319
R+DVTSALP+A V A +GEPWVR++A+ +LALA+ H+ K S E+E + R
Sbjct: 264 RDDVTSALPSAAVLAGVGEPWVRVVAITGYLALAMYHNSTKTS-----SEEESQILRRAP 323
Query: 320 PLPLLGVALAIGIHAAAKWAGYRHLTWMIV 350
P+PLL ALAIG+ AAKWAGYRHLTWMIV
Sbjct: 324 PMPLLAAALAIGVRLAAKWAGYRHLTWMIV 348
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_008437523.1 | 1.07e-243 | 99.71 | PREDICTED: uncharacterized protein LOC103482911 [Cucumis melo] | [more] |
| KAA0042600.1 | 2.41e-231 | 95.00 | Embryo defective 1923 [Cucumis melo var. makuwa] >TYK06002.1 Embryo defective 19... | [more] |
| XP_004145896.1 | 5.27e-223 | 91.40 | uncharacterized protein LOC101214502 [Cucumis sativus] >KGN49929.1 hypothetical ... | [more] |
| XP_038906583.1 | 1.15e-211 | 87.46 | uncharacterized protein LOC120092540 isoform X1 [Benincasa hispida] | [more] |
| XP_023549679.1 | 5.70e-190 | 79.66 | uncharacterized protein LOC111808104 [Cucurbita pepo subsp. pepo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A1S3ATW7 | 5.17e-244 | 99.71 | uncharacterized protein LOC103482911 OS=Cucumis melo OX=3656 GN=LOC103482911 PE=... | [more] |
| A0A5A7TGY5 | 1.17e-231 | 95.00 | Embryo defective 1923 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37... | [more] |
| A0A0A0KM42 | 2.55e-223 | 91.40 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G141030 PE=4 SV=1 | [more] |
| A0A6J1IBT2 | 3.21e-189 | 78.80 | uncharacterized protein LOC111471530 OS=Cucurbita maxima OX=3661 GN=LOC111471530... | [more] |
| A0A6J1E6L3 | 9.19e-189 | 79.08 | uncharacterized protein LOC111430430 OS=Cucurbita moschata OX=3662 GN=LOC1114304... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G28210.1 | 8.7e-92 | 60.74 | embryo defective 1923 | [more] |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MELO3C005833.jh1.t1.exon | MELO3C005833.jh1.t1.exon | exon |
| MELO3C005833.jh1.t1.exon | MELO3C005833.jh1.t1.exon_2 | exon |
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MELO3C005833.jh1.t1.stop_codon | MELO3C005833.jh1.t1.stop_codon | stop_codon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MELO3C005833.jh1.t1.cds | MELO3C005833.jh1.t1.cds | CDS |
| MELO3C005833.jh1.t1.cds | MELO3C005833.jh1.t1.cds_2 | CDS |
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MELO3C005833.jh1.t1.start_codon | MELO3C005833.jh1.t1.start_codon | start_codon |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MELO3C005833.jh1.t1 | MELO3C005833.jh1.t1-protein | polypeptide |
