MELO3C004973.jh1.t1 (mRNA) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonstart_codonCDSpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCACCCGAGATTTGCAACGATGAAATATTTGACAGAAGCATCGATTCATTTTCATTCGGTCTCATTTTATACGAGGTATCTACAATTCAATTTCTTTTTTCATTTCCTTAATCTTTCTGTATTATTAAGAGTTGATTCGCATTTGGAAGCAATTTTTTTATCACTTGATAATGACTTCTTTTGTATTTGTATATAATTTGGTTTTCATGGACAGATGGTTGAAGGTATTCAACCATTCCATCGAAAGCCTTCAGAAGAGGTTGCCAAAGCTATTTGTGTAGAAGGAAAGAGACCTCTATTTAAGATCAAATCAAAAATTTATCCACCTGATATAAAAGAGTAA ATGGCACCCGAGATTTGCAACGATGAAATATTTGACAGAAGCATCGATTCATTTTCATTCGGTCTCATTTTATACGAGATGGTTGAAGGTATTCAACCATTCCATCGAAAGCCTTCAGAAGAGGTTGCCAAAGCTATTTGTGTAGAAGGAAAGAGACCTCTATTTAAGATCAAATCAAAAATTTATCCACCTGATATAAAAGAGTAA ATGGCACCCGAGATTTGCAACGATGAAATATTTGACAGAAGCATCGATTCATTTTCATTCGGTCTCATTTTATACGAGATGGTTGAAGGTATTCAACCATTCCATCGAAAGCCTTCAGAAGAGGTTGCCAAAGCTATTTGTGTAGAAGGAAAGAGACCTCTATTTAAGATCAAATCAAAAATTTATCCACCTGATATAAAAGAGTAA MAPEICNDEIFDRSIDSFSFGLILYEMVEGIQPFHRKPSEEVAKAICVEGKRPLFKIKSKIYPPDIKE Homology
BLAST of MELO3C004973.jh1.t1 vs. NCBI nr
Match: XP_008455272.1 (PREDICTED: dual specificity protein kinase shkC-like isoform X2 [Cucumis melo]) HSP 1 Score: 123 bits (308), Expect = 3.57e-31 Identity = 58/68 (85.29%), Postives = 62/68 (91.18%), Query Frame = 0
BLAST of MELO3C004973.jh1.t1 vs. NCBI nr
Match: XP_008455271.1 (PREDICTED: dual specificity protein kinase shkC-like isoform X1 [Cucumis melo] >XP_016901767.1 PREDICTED: dual specificity protein kinase shkC-like isoform X1 [Cucumis melo]) HSP 1 Score: 123 bits (308), Expect = 3.61e-31 Identity = 58/68 (85.29%), Postives = 62/68 (91.18%), Query Frame = 0
BLAST of MELO3C004973.jh1.t1 vs. NCBI nr
Match: KAA0031537.1 (dual specificity protein kinase shkC-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 123 bits (308), Expect = 3.80e-31 Identity = 58/68 (85.29%), Postives = 62/68 (91.18%), Query Frame = 0
BLAST of MELO3C004973.jh1.t1 vs. NCBI nr
Match: TYK06990.1 (dual specificity protein kinase shkC-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 123 bits (308), Expect = 4.07e-31 Identity = 58/68 (85.29%), Postives = 62/68 (91.18%), Query Frame = 0
BLAST of MELO3C004973.jh1.t1 vs. NCBI nr
Match: XP_038888786.1 (integrin-linked protein kinase 1-like [Benincasa hispida]) HSP 1 Score: 121 bits (303), Expect = 1.87e-30 Identity = 56/68 (82.35%), Postives = 62/68 (91.18%), Query Frame = 0
BLAST of MELO3C004973.jh1.t1 vs. ExPASy Swiss-Prot
Match: F4IS56 (Integrin-linked protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=ILK1 PE=1 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 3.8e-20 Identity = 42/68 (61.76%), Postives = 55/68 (80.88%), Query Frame = 0
BLAST of MELO3C004973.jh1.t1 vs. ExPASy Swiss-Prot
Match: P34722 (Protein kinase C-like 1 OS=Caenorhabditis elegans OX=6239 GN=tpa-1 PE=1 SV=2) HSP 1 Score: 47.8 bits (112), Expect = 5.9e-05 Identity = 20/55 (36.36%), Postives = 37/55 (67.27%), Query Frame = 0
BLAST of MELO3C004973.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q9ZQ31 (Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 PE=1 SV=2) HSP 1 Score: 47.8 bits (112), Expect = 5.9e-05 Identity = 18/53 (33.96%), Postives = 33/53 (62.26%), Query Frame = 0
BLAST of MELO3C004973.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q54Y55 (Dual specificity protein kinase shkC OS=Dictyostelium discoideum OX=44689 GN=shkC PE=3 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 7.6e-05 Identity = 21/54 (38.89%), Postives = 37/54 (68.52%), Query Frame = 0
BLAST of MELO3C004973.jh1.t1 vs. ExPASy Swiss-Prot
Match: P36583 (Protein kinase C-like 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pck2 PE=1 SV=2) HSP 1 Score: 47.0 bits (110), Expect = 1.0e-04 Identity = 22/57 (38.60%), Postives = 37/57 (64.91%), Query Frame = 0
BLAST of MELO3C004973.jh1.t1 vs. ExPASy TrEMBL
Match: A0A1S3C195 (dual specificity protein kinase shkC-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495475 PE=4 SV=1) HSP 1 Score: 123 bits (308), Expect = 1.73e-31 Identity = 58/68 (85.29%), Postives = 62/68 (91.18%), Query Frame = 0
BLAST of MELO3C004973.jh1.t1 vs. ExPASy TrEMBL
Match: A0A1S3C0I9 (dual specificity protein kinase shkC-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495475 PE=4 SV=1) HSP 1 Score: 123 bits (308), Expect = 1.75e-31 Identity = 58/68 (85.29%), Postives = 62/68 (91.18%), Query Frame = 0
BLAST of MELO3C004973.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5A7SPY2 (Dual specificity protein kinase shkC-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G003020 PE=4 SV=1) HSP 1 Score: 123 bits (308), Expect = 1.84e-31 Identity = 58/68 (85.29%), Postives = 62/68 (91.18%), Query Frame = 0
BLAST of MELO3C004973.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5D3C6M9 (Dual specificity protein kinase shkC-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003060 PE=4 SV=1) HSP 1 Score: 123 bits (308), Expect = 1.97e-31 Identity = 58/68 (85.29%), Postives = 62/68 (91.18%), Query Frame = 0
BLAST of MELO3C004973.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6J1DTP3 (dual specificity protein kinase shkC-like OS=Momordica charantia OX=3673 GN=LOC111024309 PE=4 SV=1) HSP 1 Score: 120 bits (300), Expect = 2.43e-30 Identity = 56/68 (82.35%), Postives = 62/68 (91.18%), Query Frame = 0
BLAST of MELO3C004973.jh1.t1 vs. TAIR 10
Match: AT2G31800.1 (Integrin-linked protein kinase family ) HSP 1 Score: 102.8 bits (255), Expect = 1.1e-22 Identity = 43/68 (63.24%), Postives = 56/68 (82.35%), Query Frame = 0
BLAST of MELO3C004973.jh1.t1 vs. TAIR 10
Match: AT2G43850.1 (Integrin-linked protein kinase family ) HSP 1 Score: 98.2 bits (243), Expect = 2.7e-21 Identity = 42/68 (61.76%), Postives = 55/68 (80.88%), Query Frame = 0
BLAST of MELO3C004973.jh1.t1 vs. TAIR 10
Match: AT2G43850.2 (Integrin-linked protein kinase family ) HSP 1 Score: 98.2 bits (243), Expect = 2.7e-21 Identity = 42/68 (61.76%), Postives = 55/68 (80.88%), Query Frame = 0
BLAST of MELO3C004973.jh1.t1 vs. TAIR 10
Match: AT3G59830.1 (Integrin-linked protein kinase family ) HSP 1 Score: 95.5 bits (236), Expect = 1.7e-20 Identity = 41/68 (60.29%), Postives = 53/68 (77.94%), Query Frame = 0
BLAST of MELO3C004973.jh1.t1 vs. TAIR 10
Match: AT3G58760.1 (Integrin-linked protein kinase family ) HSP 1 Score: 65.9 bits (159), Expect = 1.5e-11 Identity = 32/68 (47.06%), Postives = 43/68 (63.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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