MELO3C004342.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C004342.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Superoxide dismutase [Cu-Zn]
Location	chr05: 26463969 .. 26468392 (+)
Sequence length	806
RNA-Seq Expression	MELO3C004342.1
Synteny	MELO3C004342.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGGTCGAATTAAAATCGCGAGGTCGCACACGCGGTGTCTTGTGGATTCAAAATTATGATTATTTCCATCACCCCTTGGTTTTTTCGCTCCATTCGGCCATGCCTTACAAATTTCGCTCCACTCCCATTCTTCTCTTCCTCTCCTCTTTCAACTGCATTGAGGCCGATCCTTTAGGTAAATGGTTCTCTCCCATTTCATCTCTAATTCCTCTGTTTCTTTTTTATTTTACTTGTTCTTTTTCCAGCCGGATCCTCCATTTCTGTGGTGAAACTGAATTGTTCTTATCGATTTCTTGTTTGAATTCTGTTTTTCTCTGTTTGTGTCTGTGTGTGTTTTTTAATTTGTTTTGGCATGTTGAAGTTTAAAGATACCAAAAGTTGCGCTTCACTACTTTCCAGTTTCGATGGTAGCTGCTAGTTGTAACGCTTACGTTCTTGGTTTTTTTAGTTAAAATTTTTTTGCTTCTTGTTGTTTACTGTTTAGCAAAAAGCATGGGGAATACTACCAAAGTCCCGAACTTAATAGATAGATGATCATGTGCTAAGAAGTGCGATACTTTCCGTAGCTGATACGTGACACAGTGTCTGACATTTGTTTGACACATATTAGAAACTTGTTAGTATAACATATGTGTTAAACAGGCATAGAACACCTGTTGTACTAAAAAAAATATTTGTATGATAATAATAATAACTTTGAAGTGTAAAATATATCCAGCTAAGTTTTTTTAAGTATACAAGTGCATTAACTCATTTCCTCTTGATTTTCTTTTGGTATAAAAATTATATATATTTTGAAAACCGTATATTTAATAAATGTATCCTTGTGCATTATGTCCTAGATTTTTAGAATATGGTGTGTCGTTGTGTCTATATCGTGTCGTATCAATATCTCGTATTCGTATTTGTGTTTGTTAGATCATATGTATAAGCGAGGACAGCTATTTCTGATGTTACAAGACCTTCTTCAAATTTTACAGGAAAATCATTCAATTTGAAAATTCAAGATTACAAATGCAATCTAAACCAAACTTCAAGAACAAAAAGTGTTATTTGTTAATATCCTTGCGACCTCACCCAAAGTATCTATTACAAACTTCAGAAAAAACTTCATAATAAGGGTTGGGTTGAAAAAAAACATAAAGAAGTCCCACCCCAACCTAACTCTGAAAAACATAAAAAATTCAATCCAACCCAAACCTTACAATTTGGGTTGGGTAGTCCGTGTTGTTCGGGTTGTCGGGTTATTTGAACTCCTAGTTTTAGCTAAGTGTAAACTTATTTAAGGATGTTGAAGGTTAGCATTGATCTTTCTCTCTCAAATTTGGTCAAGAGGAATTATTTTTTGAGTCATTCATATAGTTCCATTTTGCTTTTGAGCATTTGAATTGTTTGTTAACTACTTCTTTGATTAATATATTCGAAAGTGAAATTTCCTTGGTTTACTTTATTGATCAGTGTCCCATTTTACCAGTTATTTCAGTTCTCCTAATAACCTTCATTGGACTTGAGTTTGGTTAACACAAAACAATGGTGAAAGCTGTAGCTGTTCTTGAGAGCAATCAGGGAGTCAGTGGAACCATCTTCTTTAGCCAAAATGGCAATGGTAGCTCAAATCAGTGTTCAAATTTAAATGCTTACTGCTTTTATGTTTTCTTTTATGTGGTTTTCAATTTTGCCCTTGTATTTTTCAGGTCCAACTACAATTACAGGAAATATTTCTGGTCTTAAGGCAGGGCTCCATGGCTTCCATGTCCATGCCCTTGGGGACACAACCAATGGTTGCTTATCAACTGGTACATTCTCATGAGTTGCACCATCTTAGTTTCTCAATGTTAGGTACAGAGTGTCTTTTAGAACATAACAACTCCACTTGCAAGCAAATTGGTTGCGCAGGGCCACATTTCAACCCTGAAGGCAAAGACCATGGTGCTCCAGATGATGAAAATCGTCATGTTGGTGATCTTGGAAATGTGGTTGCCGGTGATAATGGTCTGTTTAATGCTGTTCCATATTGCTTTTCATTTTCTCCCTGAAGTAACTATCTTTTTGGTCCTCGAGTTTTGAAGAATGTGTGTTTTTTATACTTGAATTTTCAAAACATGCTTTTTTACTCCTTGAGTCTTTTTGGAACAGATGTATTTGGTCTCGAGTTTTCAATATGTAGTTTTTTAATCCTTAAATTGTTAAGATTAGGTTTAAAAGGTCCCTTTAAGTGTATTGCCATTATTATTTTATATTAATTATATCACATGACATTTTGAAGTACAGAAATAATTTTAGAGAAAAGTAACTTTCTTAAAATTTATTTTTCCAATATAAAATAATGATAAGAAATTTATGCGGGGGCCTTTTGAACTTTAAAAACTCAGAAACTAAAAAAAGTACATTTAAGAAATTTAGAGATCAAATGTACTTGTTCTGAAAAATTTGGAGTCTAAACAAGTATATCTTGAAAACTGAGAAACTAAATGCACACCTTTTTCAAAACTCAAGGATTAAAAAGGTGATTTTGTCTAAATTTCAATGAGCTGGAAGTGGACTCTAAATTCAATCCCTCCAAAATGCAGGACATGGGATTCCTTGAAGGAATCCAGCTTCCCTCTCCATCCTCCCATCAATTACAATATTTCAATAAATATCACTGAATTCCATGTTAAAGCACTCTTTTCTTTTCCTTTTTGAGGATTAATTTGACATGATTGTAAATGTTGTTACGTTTACGGTACAGGTACTGCTACTTTCTCTATTATTGACAAACAGGTTTGGACAATTTTATGTTTAGTTTGATACTTTGCCATCTCTACTGGAAGTCTCAACTAGTGAGCATTACTTCTTTCTATGTTATGCAGATTTCCCTTGTTGGACGAAATTCCGTTCTTGGAAGGTCTATTGTTGTCCATGCAGATCCTGATGATCTTGGCAGGGGTAATTTTATAAATCTTCATTGCTATATTTCTAATAGGAATTATACACATTTAACTCTATCGCAACTAATCTTATCATGCAAAGATTTTAATGATTGACCTAAAGAAACTAACCTCAATTGCATTAATTGTAACTATGCTTCACTTTCGCCTTGGTATTAATTTGATCTTCTTTGAATTCAGTGATATTCTTTTGGGGTTCTTCCCATTTTTTCTCCATACGTGCAGAACATCCATATTCTTCACATTTGTATAATTAAGTTTATTCAAATCTTAAACCAATAGATTATTTTATGTGCTGGAAGTATCACTCTTTGAAATATTTGTTTCCCTTCAATTTCTTGTAAACCTCCTGATGTATTCAAAAATCCCTCAAAGGGAACTTTTTTTATCACAAAATGCAGAATGATTATAAAGTAACTGTAACCAGCAGCCATTTATATAGGCTGACATAAACAACCTAAGGGAAAAGAGGCTCTCGACAAAAACAAAGAACTAACTAACAGCTTATTAAATAAAGCTGTAAAAATACAACTAAGAAGGGTAAAATCTAAGAACAAAGAATTATTTAACTTAAACAAGAAACAACCCCGAGAAAGAACAAGAAACTAAGAATAAACTAATAACAATAGCCCTCATGACCCCCTTTTGTCTCTGCTTGTCAAGTGGATGGCATTCCATCAGATTCAGGATAACCAAATAAAGAAATCTGAAGCATAATCTGACCTTGGCTGCAGGTGGAACTGAACTTAGCCTGACCACTGGCAATGCGGGTGAGAGAATAGGTTGTGGTAAGTACATAATCATACTAATTCGTCACATTCACATTGCTTCTAAGGATTATGCTATGCTAGCCAAGCAGTTAAAAAAAACAAAAAACATACTTGTTCAAACCCTACCTTTCTTTTTTAGATAATAGGTCTGAGATTTGATAGTACAAGTTCATATCAGTTAAATTATTGAACTTGCAATTATCTATCATTAGGTGTATGTCTTTTAGTTAATTTACCAAGGTTTTAAATTTTACTCTCCTGACAAATGTACGGTTCTAATAACAGTCATATATGTATAATGACGTAATGTGACAAATTGTACAAGTATTTTACTTATTATACATGTACACACTTCTCTCTGGGTTTATCGTTATAATTTATATCAATTCTTTAACTTGCACAAACAGATTCAGCACCCTGAATGTATTGATTGGGACATTTTTTTTCACTCTTGGGATTGATCTGTTCTCAAATACAGGTAGCTAAAATTTTTCCTTGACGTAAATCTCTGTTATTATATGTTTGTTGCAGGCGTTATTGGACTGCAAGAGTGAAGTACACTTCGACTTGCATGGTCTGTGATGATTGATGAACAAGTATGATGTATAAAATGCTTTATTTTGGAACATATATATTGTATCTAAAATAAGACGGCTTCAAGCCTTATAGCAGAAATAAATAAAATTAGCATGAAAAAATCTAATCTTATCTTTTATTTACTTTA

mRNA sequence

TCGGTCGAATTAAAATCGCGAGGTCGCACACGCGGTGTCTTGTGGATTCAAAATTATGATTATTTCCATCACCCCTTGGTTTTTTCGCTCCATTCGGCCATGCCTTACAAATTTCGCTCCACTCCCATTCTTCTCTTCCTCTCCTCTTTCAACTGCATTGAGGCCGATCCTTTAGTTATTTCAGTTCTCCTAATAACCTTCATTGGACTTGAGTTTGGTTAACACAAAACAATGGTGAAAGCTGTAGCTGTTCTTGAGAGCAATCAGGGAGTCAGTGGAACCATCTTCTTTAGCCAAAATGGCAATGGTCCAACTACAATTACAGGAAATATTTCTGGTCTTAAGGCAGGGCTCCATGGCTTCCATGTCCATGCCCTTGGGGACACAACCAATGGTTGCTTATCAACTGGGCCACATTTCAACCCTGAAGGCAAAGACCATGGTGCTCCAGATGATGAAAATCGTCATGTTGGTGATCTTGGAAATGTGGTTGCCGGTGATAATGGTACTGCTACTTTCTCTATTATTGACAAACAGATTTCCCTTGTTGGACGAAATTCCGTTCTTGGAAGGTCTATTGTTGTCCATGCAGATCCTGATGATCTTGGCAGGGGCGTTATTGGACTGCAAGAGTGAAGTACACTTCGACTTGCATGGTCTGTGATGATTGATGAACAAGTATGATGTATAAAATGCTTTATTTTGGAACATATATATTGTATCTAAAATAAGACGGCTTCAAGCCTTATAGCAGAAATAAATAAAATTAGCATGAAAAAATCTAATCTTATCTTTTATTTACTTTA

Coding sequence (CDS)

ATGGTGAAAGCTGTAGCTGTTCTTGAGAGCAATCAGGGAGTCAGTGGAACCATCTTCTTTAGCCAAAATGGCAATGGTCCAACTACAATTACAGGAAATATTTCTGGTCTTAAGGCAGGGCTCCATGGCTTCCATGTCCATGCCCTTGGGGACACAACCAATGGTTGCTTATCAACTGGGCCACATTTCAACCCTGAAGGCAAAGACCATGGTGCTCCAGATGATGAAAATCGTCATGTTGGTGATCTTGGAAATGTGGTTGCCGGTGATAATGGTACTGCTACTTTCTCTATTATTGACAAACAGATTTCCCTTGTTGGACGAAATTCCGTTCTTGGAAGGTCTATTGTTGTCCATGCAGATCCTGATGATCTTGGCAGGGGCGTTATTGGACTGCAAGAGTGA

Protein sequence

MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTGPHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHADPDDLGRGVIGLQE

Homology

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BLAST of MELO3C004342.1 vs. NCBI nr
Match: XP_008455578.1 (PREDICTED: superoxide dismutase [Cu-Zn] isoform X2 [Cucumis melo])

HSP 1 Score: 272.3 bits (695), Expect = 2.2e-69
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG
Sbjct: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120

Query: 121 DPDDLGRGVIGLQE 135
           DPDDLGRGVIGLQE
Sbjct: 121 DPDDLGRGVIGLQE 134

[Close]

BLAST of MELO3C004342.1 vs. NCBI nr
Match: XP_008455574.1 (PREDICTED: superoxide dismutase [Cu-Zn] isoform X1 [Cucumis melo])

HSP 1 Score: 261.5 bits (667), Expect = 3.9e-66
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG
Sbjct: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120

Query: 121 DPDDLGRG 129
           DPDDLGRG
Sbjct: 121 DPDDLGRG 128

[Close]

BLAST of MELO3C004342.1 vs. NCBI nr
Match: TYK18385.1 (superoxide dismutase [Cucumis melo var. makuwa])

HSP 1 Score: 261.5 bits (667), Expect = 3.9e-66
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG
Sbjct: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120

Query: 121 DPDDLGRG 129
           DPDDLGRG
Sbjct: 121 DPDDLGRG 128

[Close]

BLAST of MELO3C004342.1 vs. NCBI nr
Match: XP_004139207.1 (superoxide dismutase [Cu-Zn] 1 [Cucumis sativus] >XP_031736634.1 superoxide dismutase [Cu-Zn] 1 [Cucumis sativus] >KGN60844.1 hypothetical protein Csa_019273 [Cucumis sativus])

HSP 1 Score: 253.1 bits (645), Expect = 1.4e-63
Identity = 124/128 (96.88%), Postives = 126/128 (98.44%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLESNQGVSG+IFFSQNGNGPT ITGNISGLKAGLHGFHVHALGDTTNGCLSTG
Sbjct: 1   MVKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNPEGKDHGAPDDENRHVGDLGNVVAGD+GTATFSIIDKQISLVG NSVLGRSIVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHA 120

Query: 121 DPDDLGRG 129
           DPDDLGRG
Sbjct: 121 DPDDLGRG 128

[Close]

BLAST of MELO3C004342.1 vs. NCBI nr
Match: XP_038890446.1 (superoxide dismutase [Cu-Zn] 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 246.1 bits (627), Expect = 1.7e-61
Identity = 118/128 (92.19%), Postives = 124/128 (96.88%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLESN+GVSGT+FFSQN NGPTT+TGNISGLKAGLHGFHVHA GDTTNGCLSTG
Sbjct: 1   MVKAVAVLESNRGVSGTVFFSQNDNGPTTVTGNISGLKAGLHGFHVHAFGDTTNGCLSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNPEGKDHGAP DENRHVGDLGN+VAGD+GTATFSI+DKQISLVG NSVLGRSIVVHA
Sbjct: 61  PHFNPEGKDHGAPHDENRHVGDLGNLVAGDDGTATFSIVDKQISLVGPNSVLGRSIVVHA 120

Query: 121 DPDDLGRG 129
           DPDDLGRG
Sbjct: 121 DPDDLGRG 128

[Close]

BLAST of MELO3C004342.1 vs. ExPASy Swiss-Prot
Match: Q07796 (Superoxide dismutase [Cu-Zn] OS=Ipomoea batatas OX=4120 GN=SODCC PE=2 SV=2)

HSP 1 Score: 217.2 bits (552), Expect = 1.1e-55
Identity = 98/128 (76.56%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVL S++GVSGTIFFSQ G+GPTT+TGN+SGLK GLHGFHVHALGDTTNGC+STG
Sbjct: 1   MVKAVAVLSSSEGVSGTIFFSQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNP GK+HGAP D+NRH GDLGN+  G++GTA+F+I DKQI L G NSV+GR++VVH 
Sbjct: 61  PHFNPAGKEHGAPGDDNRHAGDLGNITVGEDGTASFTITDKQIPLTGANSVIGRAVVVHG 120

Query: 121 DPDDLGRG 129
           DPDDLG+G
Sbjct: 121 DPDDLGKG 128

[Close]

BLAST of MELO3C004342.1 vs. ExPASy Swiss-Prot
Match: P93258 (Superoxide dismutase [Cu-Zn] 1 OS=Mesembryanthemum crystallinum OX=3544 GN=SODCC.1 PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 9.3e-55
Identity = 96/128 (75.00%), Postives = 114/128 (89.06%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAV VL S++GVSGT+ F+Q G+GPTT+TGN+SGL+ GLHGFHVHALGDTTNGC+STG
Sbjct: 1   MVKAVVVLSSSEGVSGTVQFTQEGSGPTTVTGNVSGLRPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNP GK+HGAP+DE RH GDLGN+  GD+GTATF+IID QI L G NS++GR++VVHA
Sbjct: 61  PHFNPAGKEHGAPEDETRHAGDLGNITVGDDGTATFTIIDSQIPLTGPNSIVGRAVVVHA 120

Query: 121 DPDDLGRG 129
           DPDDLGRG
Sbjct: 121 DPDDLGRG 128

[Close]

BLAST of MELO3C004342.1 vs. ExPASy Swiss-Prot
Match: O49073 (Superoxide dismutase [Cu-Zn] OS=Paulownia kawakamii OX=70770 GN=SODCC PE=2 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 3.5e-54
Identity = 96/128 (75.00%), Postives = 114/128 (89.06%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVK VAVL S++GVSGTI+F+Q G+GPTT+TGN+SGLK G HGFHVHALGDTTNGCLSTG
Sbjct: 1   MVKGVAVLSSSEGVSGTIYFTQEGDGPTTVTGNVSGLKPGPHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNP GK+HGAPDDE RH GDLGNV  G++GTA F+I+DKQI L G +S++GR++VVHA
Sbjct: 61  PHFNPAGKEHGAPDDEVRHAGDLGNVTVGEDGTAAFTIVDKQIPLTGPHSIIGRAVVVHA 120

Query: 121 DPDDLGRG 129
           DPDDLG+G
Sbjct: 121 DPDDLGKG 128

[Close]

BLAST of MELO3C004342.1 vs. ExPASy Swiss-Prot
Match: Q8L5E0 (Superoxide dismutase [Cu-Zn] 2 OS=Olea europaea OX=4146 GN=OLE5 PE=1 SV=2)

HSP 1 Score: 209.9 bits (533), Expect = 1.8e-53
Identity = 92/128 (71.88%), Postives = 114/128 (89.06%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAV VL S++GV+GT++F+Q G+GPTT+TGN+SGLK GLHGFHVHALGDTTNGC+STG
Sbjct: 1   MVKAVTVLNSSEGVTGTVYFTQEGDGPTTVTGNLSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNP GK+HGAP DENRH GDLGN+  G++GTA  +I+DKQI L G +S++GR++VVH+
Sbjct: 61  PHFNPVGKEHGAPGDENRHAGDLGNITVGEDGTAAINIVDKQIPLTGPHSIIGRAVVVHS 120

Query: 121 DPDDLGRG 129
           DPDDLGRG
Sbjct: 121 DPDDLGRG 128

[Close]

BLAST of MELO3C004342.1 vs. ExPASy Swiss-Prot
Match: P27082 (Superoxide dismutase [Cu-Zn] OS=Nicotiana plumbaginifolia OX=4092 GN=SODCC PE=2 SV=2)

HSP 1 Score: 209.5 bits (532), Expect = 2.3e-53
Identity = 93/128 (72.66%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVL S++GVSGTIFF+Q+G+ PTT+TGN+SGLK GLHGFHVHALGDTTNGC+STG
Sbjct: 1   MVKAVAVLSSSEGVSGTIFFTQDGDAPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PH+NP GK+HGAP+DE RH GDLGN+  G++GTA+F++ DKQI L G  S++GR++VVHA
Sbjct: 61  PHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTLTDKQIPLAGPQSIIGRAVVVHA 120

Query: 121 DPDDLGRG 129
           DPDDLG+G
Sbjct: 121 DPDDLGKG 128

[Close]

BLAST of MELO3C004342.1 vs. ExPASy TrEMBL
Match: A0A1S3C2H4 (Superoxide dismutase OS=Cucumis melo OX=3656 GN=LOC103495717 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.1e-69
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG
Sbjct: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120

Query: 121 DPDDLGRGVIGLQE 135
           DPDDLGRGVIGLQE
Sbjct: 121 DPDDLGRGVIGLQE 134

[Close]

BLAST of MELO3C004342.1 vs. ExPASy TrEMBL
Match: A0A5D3D4B3 (Superoxide dismutase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001080 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.9e-66
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG
Sbjct: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120

Query: 121 DPDDLGRG 129
           DPDDLGRG
Sbjct: 121 DPDDLGRG 128

[Close]

BLAST of MELO3C004342.1 vs. ExPASy TrEMBL
Match: A0A1S3C1D1 (Superoxide dismutase [Cu-Zn] OS=Cucumis melo OX=3656 GN=LOC103495717 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.9e-66
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG
Sbjct: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120

Query: 121 DPDDLGRG 129
           DPDDLGRG
Sbjct: 121 DPDDLGRG 128

[Close]

BLAST of MELO3C004342.1 vs. ExPASy TrEMBL
Match: A0A0A0LIH2 (Superoxide dismutase [Cu-Zn] OS=Cucumis sativus OX=3659 GN=Csa_2G013250 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 6.7e-64
Identity = 124/128 (96.88%), Postives = 126/128 (98.44%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLESNQGVSG+IFFSQNGNGPT ITGNISGLKAGLHGFHVHALGDTTNGCLSTG
Sbjct: 1   MVKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNPEGKDHGAPDDENRHVGDLGNVVAGD+GTATFSIIDKQISLVG NSVLGRSIVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHA 120

Query: 121 DPDDLGRG 129
           DPDDLGRG
Sbjct: 121 DPDDLGRG 128

[Close]

BLAST of MELO3C004342.1 vs. ExPASy TrEMBL
Match: A0A6J1G326 (Superoxide dismutase OS=Cucurbita moschata OX=3662 GN=LOC111450340 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 4.0e-61
Identity = 117/128 (91.41%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLESNQGV GT+FF+QNGNGPTT+ GNISGL  GLHGFHVHALGDTTNGC STG
Sbjct: 1   MVKAVAVLESNQGVKGTVFFNQNGNGPTTVRGNISGLTPGLHGFHVHALGDTTNGCSSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNPEGKDHGAPDDENRHVGDLGN+VAGD+GTATFSIIDKQISLVG NSVLGRSIVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNLVAGDDGTATFSIIDKQISLVGTNSVLGRSIVVHA 120

Query: 121 DPDDLGRG 129
           DPDDLGRG
Sbjct: 121 DPDDLGRG 128

[Close]

BLAST of MELO3C004342.1 vs. TAIR 10
Match: AT1G08830.1 (copper/zinc superoxide dismutase 1 )

HSP 1 Score: 204.9 bits (520), Expect = 4.0e-53
Identity = 92/128 (71.88%), Postives = 111/128 (86.72%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           M K VAVL S++GV+GTIFF+Q G+G TT++G +SGLK GLHGFHVHALGDTTNGC+STG
Sbjct: 1   MAKGVAVLNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNP+GK HGAP+D NRH GDLGN+  GD+GTATF+I D QI L G NS++GR++VVHA
Sbjct: 61  PHFNPDGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHA 120

Query: 121 DPDDLGRG 129
           DPDDLG+G
Sbjct: 121 DPDDLGKG 128

[Close]

BLAST of MELO3C004342.1 vs. TAIR 10
Match: AT1G08830.2 (copper/zinc superoxide dismutase 1 )

HSP 1 Score: 204.9 bits (520), Expect = 4.0e-53
Identity = 92/128 (71.88%), Postives = 111/128 (86.72%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           M K VAVL S++GV+GTIFF+Q G+G TT++G +SGLK GLHGFHVHALGDTTNGC+STG
Sbjct: 1   MAKGVAVLNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNP+GK HGAP+D NRH GDLGN+  GD+GTATF+I D QI L G NS++GR++VVHA
Sbjct: 61  PHFNPDGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHA 120

Query: 121 DPDDLGRG 129
           DPDDLG+G
Sbjct: 121 DPDDLGKG 128

[Close]

BLAST of MELO3C004342.1 vs. TAIR 10
Match: AT5G18100.1 (copper/zinc superoxide dismutase 3 )

HSP 1 Score: 160.6 bits (405), Expect = 8.7e-40
Identity = 73/127 (57.48%), Postives = 95/127 (74.80%), Query Frame = 0


Query: 2   VKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTGP 61
           ++AVA++  +  V G + F Q+ +G T +TG ISGL  G HGFH+H+ GDTTNGC+STGP
Sbjct: 8   LRAVALIAGDNNVRGCLQFVQDISGTTHVTGKISGLSPGFHGFHIHSFGDTTNGCISTGP 67

Query: 62  HFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHAD 121
           HFNP  + HG P++E RH GDLGN++AG NG A   I DK I L G+ S+LGR++VVHAD
Sbjct: 68  HFNPLNRVHGPPNEEERHAGDLGNILAGSNGVAEILIKDKHIPLSGQYSILGRAVVVHAD 127

Query: 122 PDDLGRG 129
           PDDLG+G
Sbjct: 128 PDDLGKG 134

[Close]

BLAST of MELO3C004342.1 vs. TAIR 10
Match: AT5G18100.2 (copper/zinc superoxide dismutase 3 )

HSP 1 Score: 160.6 bits (405), Expect = 8.7e-40
Identity = 73/127 (57.48%), Postives = 95/127 (74.80%), Query Frame = 0


Query: 2   VKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTGP 61
           ++AVA++  +  V G + F Q+ +G T +TG ISGL  G HGFH+H+ GDTTNGC+STGP
Sbjct: 8   LRAVALIAGDNNVRGCLQFVQDISGTTHVTGKISGLSPGFHGFHIHSFGDTTNGCISTGP 67

Query: 62  HFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHAD 121
           HFNP  + HG P++E RH GDLGN++AG NG A   I DK I L G+ S+LGR++VVHAD
Sbjct: 68  HFNPLNRVHGPPNEEERHAGDLGNILAGSNGVAEILIKDKHIPLSGQYSILGRAVVVHAD 127

Query: 122 PDDLGRG 129
           PDDLG+G
Sbjct: 128 PDDLGKG 134

[Close]

BLAST of MELO3C004342.1 vs. TAIR 10
Match: AT2G28190.1 (copper/zinc superoxide dismutase 2 )

HSP 1 Score: 152.5 bits (384), Expect = 2.4e-37
Identity = 72/126 (57.14%), Postives = 89/126 (70.63%), Query Frame = 0


Query: 3   KAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTGPH 62
           KAVAVL+    V G +  +Q+ +GPTT+   I+GL  G HGFH+H  GDTTNGC+STGPH
Sbjct: 66  KAVAVLKGTSDVEGVVTLTQDDSGPTTVNVRITGLTPGPHGFHLHEFGDTTNGCISTGPH 125

Query: 63  FNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHADP 122
           FNP    HGAP+DE RH GDLGN+ A  +G A  +I+D QI L G NSV+GR+ VVH   
Sbjct: 126 FNPNNMTHGAPEDECRHAGDLGNINANADGVAETTIVDNQIPLTGPNSVVGRAFVVHELK 185

Query: 123 DDLGRG 129
           DDLG+G
Sbjct: 186 DDLGKG 191

The following BLAST results are available for this feature:

BLAST of MELO3C004342.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455578.1	2.2e-69	100.00	PREDICTED: superoxide dismutase [Cu-Zn] isoform X2 [Cucumis melo]	[more]
XP_008455574.1	3.9e-66	100.00	PREDICTED: superoxide dismutase [Cu-Zn] isoform X1 [Cucumis melo]	[more]
TYK18385.1	3.9e-66	100.00	superoxide dismutase [Cucumis melo var. makuwa]	[more]
XP_004139207.1	1.4e-63	96.88	superoxide dismutase [Cu-Zn] 1 [Cucumis sativus] >XP_031736634.1 superoxide dism...	[more]
XP_038890446.1	1.7e-61	92.19	superoxide dismutase [Cu-Zn] 1-like isoform X2 [Benincasa hispida]	[more]

BLAST of MELO3C004342.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q07796	1.1e-55	76.56	Superoxide dismutase [Cu-Zn] OS=Ipomoea batatas OX=4120 GN=SODCC PE=2 SV=2	[more]
P93258	9.3e-55	75.00	Superoxide dismutase [Cu-Zn] 1 OS=Mesembryanthemum crystallinum OX=3544 GN=SODCC...	[more]
O49073	3.5e-54	75.00	Superoxide dismutase [Cu-Zn] OS=Paulownia kawakamii OX=70770 GN=SODCC PE=2 SV=1	[more]
Q8L5E0	1.8e-53	71.88	Superoxide dismutase [Cu-Zn] 2 OS=Olea europaea OX=4146 GN=OLE5 PE=1 SV=2	[more]
P27082	2.3e-53	72.66	Superoxide dismutase [Cu-Zn] OS=Nicotiana plumbaginifolia OX=4092 GN=SODCC PE=2 ...	[more]

BLAST of MELO3C004342.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C2H4	1.1e-69	100.00	Superoxide dismutase OS=Cucumis melo OX=3656 GN=LOC103495717 PE=3 SV=1	[more]
A0A5D3D4B3	1.9e-66	100.00	Superoxide dismutase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456...	[more]
A0A1S3C1D1	1.9e-66	100.00	Superoxide dismutase [Cu-Zn] OS=Cucumis melo OX=3656 GN=LOC103495717 PE=3 SV=1	[more]
A0A0A0LIH2	6.7e-64	96.88	Superoxide dismutase [Cu-Zn] OS=Cucumis sativus OX=3659 GN=Csa_2G013250 PE=3 SV=...	[more]
A0A6J1G326	4.0e-61	91.41	Superoxide dismutase OS=Cucurbita moschata OX=3662 GN=LOC111450340 PE=3 SV=1	[more]

BLAST of MELO3C004342.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08830.1	4.0e-53	71.88	copper/zinc superoxide dismutase 1	[more]
AT1G08830.2	4.0e-53	71.88	copper/zinc superoxide dismutase 1	[more]
AT5G18100.1	8.7e-40	57.48	copper/zinc superoxide dismutase 3	[more]
AT5G18100.2	8.7e-40	57.48	copper/zinc superoxide dismutase 3	[more]
AT2G28190.1	2.4e-37	57.14	copper/zinc superoxide dismutase 2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001424	Superoxide dismutase, copper/zinc binding domain	PRINTS	PR00068	CUZNDISMTASE	coord: 79..88 score: 74.74 coord: 43..65 score: 79.25 coord: 123..134 score: 18.82 coord: 98..120 score: 54.73
IPR001424	Superoxide dismutase, copper/zinc binding domain	PFAM	PF00080	Sod_Cu	coord: 11..125 e-value: 2.3E-41 score: 141.2
IPR001424	Superoxide dismutase, copper/zinc binding domain	CDD	cd00305	Cu-Zn_Superoxide_Dismutase	coord: 2..128 e-value: 8.08347E-52 score: 158.963
IPR036423	Superoxide dismutase-like, copper/zinc binding domain superfamily	GENE3D	2.60.40.200	Superoxide dismutase, copper/zinc binding domain	coord: 1..134 e-value: 2.0E-54 score: 185.9
IPR036423	Superoxide dismutase-like, copper/zinc binding domain superfamily	SUPERFAMILY	49329	Cu,Zn superoxide dismutase-like	coord: 2..128
IPR024134	Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone	PANTHER	PTHR10003	SUPEROXIDE DISMUTASE CU-ZN -RELATED	coord: 1..130
None	No IPR available	PANTHER	PTHR10003:SF84	SUPEROXIDE DISMUTASE [CU-ZN]	coord: 1..130
IPR018152	Superoxide dismutase, copper/zinc, binding site	PROSITE	PS00087	SOD_CU_ZN_1	coord: 43..53

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C004342	MELO3C004342	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C004342.1:exon:156928	MELO3C004342.1:exon:156928	exon
MELO3C004342.1:exon:156929	MELO3C004342.1:exon:156929	exon
MELO3C004342.1:exon:156930	MELO3C004342.1:exon:156930	exon
MELO3C004342.1:exon:156931	MELO3C004342.1:exon:156931	exon
MELO3C004342.1:exon:156932	MELO3C004342.1:exon:156932	exon
MELO3C004342.1:exon:156933	MELO3C004342.1:exon:156933	exon
MELO3C004342.1:exon:156934	MELO3C004342.1:exon:156934	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C004342.1:five_prime_utr	MELO3C004342.1:five_prime_utr	five_prime_UTR
MELO3C004342.1:five_prime_utr	MELO3C004342.1:five_prime_utr_2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C004342.1:cds	MELO3C004342.1:cds	CDS
MELO3C004342.1:cds	MELO3C004342.1:cds_2	CDS
MELO3C004342.1:cds	MELO3C004342.1:cds_3	CDS
MELO3C004342.1:cds	MELO3C004342.1:cds_4	CDS
MELO3C004342.1:cds	MELO3C004342.1:cds_5	CDS
MELO3C004342.1:cds	MELO3C004342.1:cds_6	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C004342.1:three_prime_utr	MELO3C004342.1:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C004342.1	MELO3C004342.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006801	superoxide metabolic process
molecular_function	GO:0046872	metal ion binding