MELO3C003246.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C003246.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	RNA exonuclease 4
Location	chr08: 32158097 .. 32161301 (-)
Sequence length	1276
RNA-Seq Expression	MELO3C003246.1
Synteny	MELO3C003246.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGGTCCACTTTCAAAATCAAATTGTTCAAAAATTTTCTCAGAGCAAGGTTGTGGCCTTTGTTTGAGAGTACTTGATGGTCCCGAAACTCTCAGTGAGCACCAAGACATTTGCTGCATAACGGCACCTGTTCACCAAGTAAGTCGCTCTCTATGCATCATATATGATAAAAAATAAGGTTACTGGTAGTTCTCAAAAGAAGAAAAAGGTTACGGGTAGTTTATATTTTTATATATCAAGTAATTGAGCCATTTATTATGATATCATACATTTGATTGGGGCTCTGTTTTAGGGAACAAGTCTACCACCAACTGATTTATCCGATTGTTATGAAGAAGATCGTTCTGATCGAGGCCTTGGAGCAATAGCTATGGATTGTGTAATGGCTGGTGGAGGAAGTGATGGTGCACTGGACATTTGTGTTTGGATATGCCTTGTTGATGAGGATGAGAAATTGATTTTCAATACTTTCGTACAACCACAAATACCGATCACGAACTACAGGTACTTATTTGTGGCATTATCTTGTTCTCTAAAGAAGGTTTTAGCTTTTAGAATTCAGCCTATAGATGCTCATTTCCCAGTCATGTTGTAGGCACGAAGTAACTGGGCTAAAGGAAGAACATATGAGGTATGCTATGCCACTGAAAAATGTCCAGGAAAAAGTGTTGAAACTCTTGTTAAATGGAGAATCCATTGGGAAATTGAGATCGAATGGTGGTAAAGCTAAGCTTCTTGTCGGCCATGACTTGGAGCATGATTTAGATTGCCTGAGAATGAATTATCCCGATCATATGTTAAGGTGATTTTTACTAACTTGGTTTATAATTTTGTGTGGCTTAGTTCACTTTTATTGAAAATAAAATCCATTTGAACTTTGAAGTGATCTGCTGAACTGCAATGCACCAGAAAAAAAAAAAAACAATCAACTACTACTTTTCAACCTTGCGCATTATTTTCTCTGGAAATAATTCCCACCATTGAGAGAAAACAATGTATTTTTTTCACTTCTTTAATATTTTTCCCTTTTTGTTTTGTTTTGTTTTTAATTGTTAAATGCACATTATTCAAACAACTTCTGCCTGAAATATTTTTATGCAGGGACACGGCTAGATATCATCCATTGATGAAAACAAATTTGGTTAGTCATTCTCTCAAGTACCTTACTCGAGCATATTTGGGGTAAGATACATTAACTATGATTCATGCTGCTTTAAAGAATGATAAACAATTTTTTTGTTATTCTTTCTTTCAATAGAAGCAATTATATTAATCAAATAATCGAAAATAAAGACCTATATTAATGTCTACAAAACTGGTGTAAATAGAACTAAGATGTCACCTAGCCAAAACCTAAACCTTAGGACTATGTGCAAAACGGCCACTGTCAATATTTTTTATAACAAAAAAATAAAGAGGCAAAAATTATGTAAAACTCTATACAAATCACTATAATTTGGCACGCCTTCCAATTGTTGGCTTGTTTGAACTATAAGGGTTTGCTATTATGGAGCTTTTTTTTGTTGCATCTCAGTATTATTTTCATCTGGTTTACTTTGTTTGTCTCCGTCTCTTGAGAGTTATTGTATCTTTGAGCATTAGTCTCTTTTCATTTTTCAGTAAAATATTACGTCTTTTATTTTTTTTGTTTCACTCAGCCCTAGATTGGTCTTTGAAGTTTTTGTTGTTCCTCTTAAGAGTTTGTTAGGAACCAAGGTAGTATGAGATGTCTTTGTCCCACATTGATTAAAATGGGATGATTAGTATGGTTCTTGAGTGGCTAGGCTTTCCCACCCCTGGCTTTTGAGGTATGGTTCTCCAAAATGCTTAAGTAGCTAACAATGAAATCAGAGTTTTTTCAAGCTTAATCCTGTAGTCAAGCTTGAATTCAAAAACCCCCAACTAGAGAGGATCTAAGTGAGCAGCAAGAGTGTATTGCGAACAAAAGCAATGAAATTATGGATTTGTGTGTTATTTTTTATTAAATCTTTCATGTTGGGTCTTTAATGCTTATCTTTGTGCTCCAATACCTCTCGCACTGTCTTTATTTGCCATGTATTAGGTTGGCTCAATGAGATGACTATAGATTTTAAAATGCTTTGGAATACATGAGTTTTGAGTGTTTGTGGTCATTTGCATAGGAGAGTCATACGGGTCTATTTATTCCTAATTTCTAATGTTTATAGAGCTAGTGTTATATGTTTAAGGCTGCTTAGATATCCACAAGAATGAAAAAAACTATCCAACACATCATCATCGAATGTTTACAGTCAACTATAGATTCAATATTTTATAATCAGCTATTGTGAGGGTCAAGGAAATGAATTTGAAATTAGAATTCTCAATGGAAATGCAAATAACCAACGTTCTATATCTTCCGCATTGAAGAATCAAATTCATTTATCCTTGAAGAGTGGTTTTTCACATATTATTTAAAAATTTGACGAAGATGAAACATTGATCATGTGGATAATGGGAGAATGCTGTCTTCATGGGTGGGTTAATATATTCTCTTTATCTTGTTTCTAGTTCATCAAGGATGATCCCAGAGAGCTATGGTTTTGTAGGTATGATATTCGGCAAGATGGGCACGATCCTTACGAAAATTGTGTATCAGTTATGCGATTATATAAAAGAATGCGCAGTCTTGATCACCGTAGACAAGTTATGACCCTGTCAGTTACTCCTTCCTGTATCCAATATGTTGCTCCCAATCTTGATTCCCATAGTGCAAAAGATCTTGAAAAGATGACTCCAGATGAACTTTATGAGATGTCGAGAACAAACTTCAAGTGTTGGTGTCATGACTCAAGACGAGTTATGCAGACTTAGGAGCCAACCATTTTTGTTTTTGCTGGTAAGAGAATGACATTGATCATTGTGGTGTCTGCAATCTGTATAGAGAATACTTGTTTTGTTAAGAAAAAGGCGAGGTTCTTAGAGGAAACACTCCCATGGTACTTGTTGGTTAAAAAATGGGAATGATCTTATCTTTTGTATCTATTTAGCCTTTCAAGACTTAAAATGATAAAGGTACACTTCCCTCATCGGAGATGTCTTACCAATTTATGGTAGTGTTTTAGGTCTCTTATGGTGTTTGTTTTGTGATATAAACAATGAGCCTTGAAAACCCAAGGACCCCTTTTTTGAAGGGTGAATGAGTTTGCTTATTTACCTAGATTAATATATATATATTTTTTTTTTTT

mRNA sequence

TAGGTCCACTTTCAAAATCAAATTGTTCAAAAATTTTCTCAGAGCAAGGTTGTGGCCTTTGTTTGAGAGTACTTGATGGTCCCGAAACTCTCAGTGAGCACCAAGACATTTGCTGCATAACGGCACCTGTTCACCAAGGAACAAGTCTACCACCAACTGATTTATCCGATTGTTATGAAGAAGATCGTTCTGATCGAGGCCTTGGAGCAATAGCTATGGATTGTGTAATGGCTGGTGGAGGAAGTGATGGTGCACTGGACATTTGTGTTTGGATATGCCTTGTTGATGAGGATGAGAAATTGATTTTCAATACTTTCGTACAACCACAAATACCGATCACGAACTACAGGCACGAAGTAACTGGGCTAAAGGAAGAACATATGAGGTATGCTATGCCACTGAAAAATGTCCAGGAAAAAGTGTTGAAACTCTTGTTAAATGGAGAATCCATTGGGAAATTGAGATCGAATGGTGGTAAAGCTAAGCTTCTTGTCGGCCATGACTTGGAGCATGATTTAGATTGCCTGAGAATGAATTATCCCGATCATATGTTAAGGGACACGGCTAGATATCATCCATTGATGAAAACAAATTTGGTTAGTCATTCTCTCAAGTACCTTACTCGAGCATATTTGGGGTATGATATTCGGCAAGATGGGCACGATCCTTACGAAAATTGTGTATCAGTTATGCGATTATATAAAAGAATGCGCAGTCTTGATCACCGTAGACAAGTTATGACCCTGTCAGTTACTCCTTCCTGTATCCAATATGTTGCTCCCAATCTTGATTCCCATAGTGCAAAAGATCTTGAAAAGATGACTCCAGATGAACTTTATGAGATGTCGAGAACAAACTTCAAGTGTTGGTGTCATGACTCAAGACGAGTTATGCAGACTTAGGAGCCAACCATTTTTGTTTTTGCTGGTAAGAGAATGACATTGATCATTGTGGTGTCTGCAATCTGTATAGAGAATACTTGTTTTGTTAAGAAAAAGGCGAGGTTCTTAGAGGAAACACTCCCATGGTACTTGTTGGTTAAAAAATGGGAATGATCTTATCTTTTGTATCTATTTAGCCTTTCAAGACTTAAAATGATAAAGGTACACTTCCCTCATCGGAGATGTCTTACCAATTTATGGTAGTGTTTTAGGTCTCTTATGGTGTTTGTTTTGTGATATAAACAATGAGCCTTGAAAACCCAAGGACCCCTTTTTTGAAGGGTGAATGAGTTTGCTTATTTACCTAGATTAATATATATATATTTTTTTTTTTT

Coding sequence (CDS)

GGTCCACTTTCAAAATCAAATTGTTCAAAAATTTTCTCAGAGCAAGGTTGTGGCCTTTGTTTGAGAGTACTTGATGGTCCCGAAACTCTCAGTGAGCACCAAGACATTTGCTGCATAACGGCACCTGTTCACCAAGGAACAAGTCTACCACCAACTGATTTATCCGATTGTTATGAAGAAGATCGTTCTGATCGAGGCCTTGGAGCAATAGCTATGGATTGTGTAATGGCTGGTGGAGGAAGTGATGGTGCACTGGACATTTGTGTTTGGATATGCCTTGTTGATGAGGATGAGAAATTGATTTTCAATACTTTCGTACAACCACAAATACCGATCACGAACTACAGGCACGAAGTAACTGGGCTAAAGGAAGAACATATGAGGTATGCTATGCCACTGAAAAATGTCCAGGAAAAAGTGTTGAAACTCTTGTTAAATGGAGAATCCATTGGGAAATTGAGATCGAATGGTGGTAAAGCTAAGCTTCTTGTCGGCCATGACTTGGAGCATGATTTAGATTGCCTGAGAATGAATTATCCCGATCATATGTTAAGGGACACGGCTAGATATCATCCATTGATGAAAACAAATTTGGTTAGTCATTCTCTCAAGTACCTTACTCGAGCATATTTGGGGTATGATATTCGGCAAGATGGGCACGATCCTTACGAAAATTGTGTATCAGTTATGCGATTATATAAAAGAATGCGCAGTCTTGATCACCGTAGACAAGTTATGACCCTGTCAGTTACTCCTTCCTGTATCCAATATGTTGCTCCCAATCTTGATTCCCATAGTGCAAAAGATCTTGAAAAGATGACTCCAGATGAACTTTATGAGATGTCGAGAACAAACTTCAAGTGTTGGTGTCATGACTCAAGACGAGTTATGCAGACTTAG

Protein sequence

GPLSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGKLRSNGGKAKLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLDHRRQVMTLSVTPSCIQYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDSRRVMQT

Homology

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BLAST of MELO3C003246.1 vs. NCBI nr
Match: KAA0045030.1 (apoptosis-enhancing nuclease isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 629.4 bits (1622), Expect = 1.6e-176
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 1   GPLSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSDCYEE 60
           GPLSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSDCYEE
Sbjct: 32  GPLSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSDCYEE 91

Query: 61  DRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVT 120
           DRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVT
Sbjct: 92  DRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVT 151

Query: 121 GLKEEHMRYAMPLKNVQEKVLKLLLNGESIGKLRSNGGKAKLLVGHDLEHDLDCLRMNYP 180
           GLKEEHMRYAMPLKNVQEKVLKLLLNGESIGKLRSNGGKAKLLVGHDLEHDLDCLRMNYP
Sbjct: 152 GLKEEHMRYAMPLKNVQEKVLKLLLNGESIGKLRSNGGKAKLLVGHDLEHDLDCLRMNYP 211

Query: 181 DHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLD 240
           DHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLD
Sbjct: 212 DHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLD 271

Query: 241 HRRQVMTLSVTPSCIQYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDSRRVMQT 300
           HRRQVMTLSVTPSCIQYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDSRRVMQT
Sbjct: 272 HRRQVMTLSVTPSCIQYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDSRRVMQT 330

[Close]

BLAST of MELO3C003246.1 vs. NCBI nr
Match: XP_008449328.1 (PREDICTED: RNA exonuclease 4-like [Cucumis melo])

HSP 1 Score: 629.4 bits (1622), Expect = 1.6e-176
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 1   GPLSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSDCYEE 60
           GPLSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSDCYEE
Sbjct: 2   GPLSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSDCYEE 61

Query: 61  DRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVT 120
           DRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVT
Sbjct: 62  DRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVT 121

Query: 121 GLKEEHMRYAMPLKNVQEKVLKLLLNGESIGKLRSNGGKAKLLVGHDLEHDLDCLRMNYP 180
           GLKEEHMRYAMPLKNVQEKVLKLLLNGESIGKLRSNGGKAKLLVGHDLEHDLDCLRMNYP
Sbjct: 122 GLKEEHMRYAMPLKNVQEKVLKLLLNGESIGKLRSNGGKAKLLVGHDLEHDLDCLRMNYP 181

Query: 181 DHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLD 240
           DHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLD
Sbjct: 182 DHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLD 241

Query: 241 HRRQVMTLSVTPSCIQYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDSRRVMQT 300
           HRRQVMTLSVTPSCIQYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDSRRVMQT
Sbjct: 242 HRRQVMTLSVTPSCIQYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDSRRVMQT 300

[Close]

BLAST of MELO3C003246.1 vs. NCBI nr
Match: TYJ96296.1 (apoptosis-enhancing nuclease isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 627.1 bits (1616), Expect = 7.8e-176
Identity = 297/299 (99.33%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 1   GPLSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSDCYEE 60
           GPLSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSDCYEE
Sbjct: 32  GPLSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSDCYEE 91

Query: 61  DRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVT 120
           DRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVT
Sbjct: 92  DRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVT 151

Query: 121 GLKEEHMRYAMPLKNVQEKVLKLLLNGESIGKLRSNGGKAKLLVGHDLEHDLDCLRMNYP 180
           GLKEEH+RYAMPLKNVQEKVLKLLLNGESIG+LRSNGGKAKLLVGHDLEHDLDCLRMNYP
Sbjct: 152 GLKEEHLRYAMPLKNVQEKVLKLLLNGESIGRLRSNGGKAKLLVGHDLEHDLDCLRMNYP 211

Query: 181 DHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLD 240
           DHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLD
Sbjct: 212 DHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLD 271

Query: 241 HRRQVMTLSVTPSCIQYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDSRRVMQT 300
           HRRQVMTLSVTPSCIQYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDSRRVMQT
Sbjct: 272 HRRQVMTLSVTPSCIQYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDSRRVMQT 330

[Close]

BLAST of MELO3C003246.1 vs. NCBI nr
Match: XP_008465475.1 (PREDICTED: RNA exonuclease 4-like isoform X1 [Cucumis melo])

HSP 1 Score: 620.2 bits (1598), Expect = 9.6e-174
Identity = 295/299 (98.66%), Postives = 297/299 (99.33%), Query Frame = 0


Query: 1   GPLSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSDCYEE 60
           GPLSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSD YEE
Sbjct: 2   GPLSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSDGYEE 61

Query: 61  DRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVT 120
           DRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVT
Sbjct: 62  DRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVT 121

Query: 121 GLKEEHMRYAMPLKNVQEKVLKLLLNGESIGKLRSNGGKAKLLVGHDLEHDLDCLRMNYP 180
           GLKEEH+RYAMPLKNVQEKVLKLLLNGESIG+LRSNGGKAKLLVGHDLEHDLDCLRMNYP
Sbjct: 122 GLKEEHLRYAMPLKNVQEKVLKLLLNGESIGRLRSNGGKAKLLVGHDLEHDLDCLRMNYP 181

Query: 181 DHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLD 240
           DHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLD
Sbjct: 182 DHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLD 241

Query: 241 HRRQVMTLSVTPSCIQYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDSRRVMQT 300
           HRRQVMT SVTPSCIQYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDSRRVMQT
Sbjct: 242 HRRQVMTRSVTPSCIQYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDSRRVMQT 300

[Close]

BLAST of MELO3C003246.1 vs. NCBI nr
Match: XP_011653750.1 (apoptosis-enhancing nuclease isoform X1 [Cucumis sativus] >XP_011653752.1 apoptosis-enhancing nuclease isoform X1 [Cucumis sativus] >XP_031739807.1 apoptosis-enhancing nuclease isoform X1 [Cucumis sativus] >XP_031739808.1 apoptosis-enhancing nuclease isoform X1 [Cucumis sativus])

HSP 1 Score: 616.7 bits (1589), Expect = 1.1e-172
Identity = 290/299 (96.99%), Postives = 297/299 (99.33%), Query Frame = 0


Query: 1   GPLSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSDCYEE 60
           GPLSKSNCSKIFSEQGCGLCLRVLDGPE+LS+HQDICCITAPVHQGTSLPPTDLSDCYEE
Sbjct: 65  GPLSKSNCSKIFSEQGCGLCLRVLDGPESLSDHQDICCITAPVHQGTSLPPTDLSDCYEE 124

Query: 61  DRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVT 120
           DRSDRGLGAIA+DCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVT
Sbjct: 125 DRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVT 184

Query: 121 GLKEEHMRYAMPLKNVQEKVLKLLLNGESIGKLRSNGGKAKLLVGHDLEHDLDCLRMNYP 180
           GLKEEHMRYAMPLKNVQEKVLKLLLNGESIG+LR NGGKAKLLVGHDLEHDLDCLR+NYP
Sbjct: 185 GLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYP 244

Query: 181 DHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLD 240
           DHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLD
Sbjct: 245 DHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLD 304

Query: 241 HRRQVMTLSVTPSCIQYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDSRRVMQT 300
           H RQVMTLS+TPSCIQYVAPNLDSHSAKDLEKMTPDELYEMSR+NFKCWCHDSRRVMQT
Sbjct: 305 HHRQVMTLSITPSCIQYVAPNLDSHSAKDLEKMTPDELYEMSRSNFKCWCHDSRRVMQT 363

[Close]

BLAST of MELO3C003246.1 vs. ExPASy Swiss-Prot
Match: Q08237 (RNA exonuclease 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=REX4 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.4e-18
Identity = 56/171 (32.75%), Postives = 91/171 (53.22%), Query Frame = 0


Query: 70  IAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRY 129
           IAMDC   G G +G       I +V+    ++ + FV+P+  +  +R  V+G+K EHM+ 
Sbjct: 122 IAMDCEFVGVGPEGKESALARISIVNYFGHVVLDEFVKPREKVVEWRTWVSGIKPEHMKN 181

Query: 130 AMPLKNVQEKVLKLLLNGESIGKLRSNGGKAKLLVGHDLEHDLDCLRMNYPDHMLRDTAR 189
           A+  K  Q+K   +L              + ++LVGH L+HDL+ L +++P  +LRDT+R
Sbjct: 182 AITFKEAQKKTADIL--------------EGRILVGHALKHDLEALMLSHPKSLLRDTSR 241

Query: 190 YHPLMK--TNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRS 239
           + P  K      + SLK LTR  L   I++  H   E+  + M LYK+ ++
Sbjct: 242 HLPFRKLYAKGKTPSLKKLTREVLKISIQEGEHSSVEDARATMLLYKKEKT 278

[Close]

BLAST of MELO3C003246.1 vs. ExPASy Swiss-Prot
Match: Q4IEV5 (RNA exonuclease 4 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=REX4 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.4e-18
Identity = 56/176 (31.82%), Postives = 97/176 (55.11%), Query Frame = 0


Query: 70  IAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRY 129
           IA+DC M G G  G       + +VD     I++++V+P+  +TN+R  V+G+ ++ MR+
Sbjct: 134 IAIDCEMVGVGPGGHESALARVSIVDFHGVQIYDSYVKPKEKVTNWRTAVSGISQKSMRF 193

Query: 130 AMPLKNVQEKVLKLLLNGESIGKLRSNGGKAKLLVGHDLEHDLDCLRMNYPDHMLRDTAR 189
           A   + VQ ++ KLL              + ++LVGHDL+HDL+ L +++P   +RDTA+
Sbjct: 194 ARDFEEVQAEIDKLL--------------RGRILVGHDLKHDLEALILSHPGKDIRDTAK 253

Query: 190 YHPLMK-TNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRS---LDH 242
           +    K  N    SL+ L +  LG +I+   H   E+  + M L+++ +S   +DH
Sbjct: 254 FSGFKKYANGRKPSLRVLAQQLLGVEIQGGEHSSIEDARATMLLFRKHKSAFDVDH 295

[Close]

BLAST of MELO3C003246.1 vs. ExPASy Swiss-Prot
Match: Q6CMT3 (RNA exonuclease 4 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=REX4 PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 4.1e-18
Identity = 54/167 (32.34%), Postives = 90/167 (53.89%), Query Frame = 0


Query: 70  IAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRY 129
           ++MDC   G G DG       + +V+    ++ + FV+P+ P+T++R  V+G+K  HM  
Sbjct: 120 VSMDCEFVGVGPDGKDSALARVSIVNYYGNVVLDLFVRPKEPVTDWRTWVSGIKPHHMAN 179

Query: 130 AMPLKNVQEKVLKLLLNGESIGKLRSNGGKAKLLVGHDLEHDLDCLRMNYPDHMLRDTAR 189
           A+  ++ Q++V              SN  K ++LVGH + HDL  L +++P  M+RDT+R
Sbjct: 180 AVTQEDCQKQV--------------SNVLKGRILVGHSVHHDLTALMLSHPRRMIRDTSR 239

Query: 190 YHPLMK--TNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYK 235
           + P  +  +   + SLK LT+  L  DI+   H   E+  + M LYK
Sbjct: 240 HMPFRQKYSEGKTPSLKKLTKEILQLDIQDGEHSSIEDARATMLLYK 272

[Close]

BLAST of MELO3C003246.1 vs. ExPASy Swiss-Prot
Match: Q9GZR2 (RNA exonuclease 4 OS=Homo sapiens OX=9606 GN=REXO4 PE=1 SV=2)

HSP 1 Score: 91.7 bits (226), Expect = 1.6e-17
Identity = 52/167 (31.14%), Postives = 94/167 (56.29%), Query Frame = 0


Query: 69  AIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMR 128
           A+A+DC M G G  G   +   + +V++  K +++ +V+P  P+T+YR  V+G++ E+++
Sbjct: 243 ALALDCEMVGVGPKGEESMAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLK 302

Query: 129 YAMPLKNVQEKVLKLLLNGESIGKLRSNGGKAKLLVGHDLEHDLDCLRMNYPDHMLRDTA 188
               L+ VQ++V ++L              K ++LVGH L +DL  L +++P   +RDT 
Sbjct: 303 QGEELEVVQKEVAEML--------------KGRILVGHALHNDLKVLFLDHPKKKIRDTQ 362

Query: 189 RYHPLMKTNLVS--HSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLY 234
           +Y P  K+ + S   SL+ L+   LG  ++Q  H   ++  + MRLY
Sbjct: 363 KYKP-FKSQVKSGRPSLRLLSEKILGLQVQQAEHCSIQDAQAAMRLY 394

[Close]

BLAST of MELO3C003246.1 vs. ExPASy Swiss-Prot
Match: Q7S9B7 (RNA exonuclease 4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=rex-4 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.5e-17
Identity = 56/185 (30.27%), Postives = 94/185 (50.81%), Query Frame = 0


Query: 52  TDLSDCYEEDRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIP 111
           TDL+   +  +S+     +++DC M G G  GA  +     +VD     I++++V+P   
Sbjct: 199 TDLALILQATKSNTLGKYLSIDCEMVGTGPSGATSVLARCSIVDFHGHQIYDSYVRPTAF 258

Query: 112 ITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGKLRSNGGKAKLLVGHDLEHD 171
           +T++R  V+G+ + HM  A   ++VQ  V  LL              K ++LVGHD++HD
Sbjct: 259 VTDWRTHVSGISKRHMASARSFESVQATVAALL--------------KGRILVGHDVKHD 318

Query: 172 LDCLRMNYPDHMLRDTARYHPLMK-TNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVM 231
           L+ L   +P   +RDTA+Y    K  +    SL+ L +  LG +I Q  H   E+    M
Sbjct: 319 LEVLGFEHPHRDIRDTAKYSGFRKYGHGPKPSLRVLAKEVLGIEIHQGQHSSVEDARVAM 369

Query: 232 RLYKR 236
            L+++
Sbjct: 379 LLFRK 369

[Close]

BLAST of MELO3C003246.1 vs. ExPASy TrEMBL
Match: A0A5A7TPB9 (RNA exonuclease 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G00150 PE=3 SV=1)

HSP 1 Score: 629.4 bits (1622), Expect = 7.6e-177
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 1   GPLSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSDCYEE 60
           GPLSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSDCYEE
Sbjct: 32  GPLSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSDCYEE 91

Query: 61  DRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVT 120
           DRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVT
Sbjct: 92  DRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVT 151

Query: 121 GLKEEHMRYAMPLKNVQEKVLKLLLNGESIGKLRSNGGKAKLLVGHDLEHDLDCLRMNYP 180
           GLKEEHMRYAMPLKNVQEKVLKLLLNGESIGKLRSNGGKAKLLVGHDLEHDLDCLRMNYP
Sbjct: 152 GLKEEHMRYAMPLKNVQEKVLKLLLNGESIGKLRSNGGKAKLLVGHDLEHDLDCLRMNYP 211

Query: 181 DHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLD 240
           DHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLD
Sbjct: 212 DHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLD 271

Query: 241 HRRQVMTLSVTPSCIQYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDSRRVMQT 300
           HRRQVMTLSVTPSCIQYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDSRRVMQT
Sbjct: 272 HRRQVMTLSVTPSCIQYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDSRRVMQT 330

[Close]

BLAST of MELO3C003246.1 vs. ExPASy TrEMBL
Match: A0A1S3BLT2 (RNA exonuclease 4 OS=Cucumis melo OX=3656 GN=LOC103491238 PE=3 SV=1)

HSP 1 Score: 629.4 bits (1622), Expect = 7.6e-177
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 1   GPLSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSDCYEE 60
           GPLSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSDCYEE
Sbjct: 2   GPLSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSDCYEE 61

Query: 61  DRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVT 120
           DRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVT
Sbjct: 62  DRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVT 121

Query: 121 GLKEEHMRYAMPLKNVQEKVLKLLLNGESIGKLRSNGGKAKLLVGHDLEHDLDCLRMNYP 180
           GLKEEHMRYAMPLKNVQEKVLKLLLNGESIGKLRSNGGKAKLLVGHDLEHDLDCLRMNYP
Sbjct: 122 GLKEEHMRYAMPLKNVQEKVLKLLLNGESIGKLRSNGGKAKLLVGHDLEHDLDCLRMNYP 181

Query: 181 DHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLD 240
           DHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLD
Sbjct: 182 DHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLD 241

Query: 241 HRRQVMTLSVTPSCIQYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDSRRVMQT 300
           HRRQVMTLSVTPSCIQYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDSRRVMQT
Sbjct: 242 HRRQVMTLSVTPSCIQYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDSRRVMQT 300

[Close]

BLAST of MELO3C003246.1 vs. ExPASy TrEMBL
Match: A0A5D3BBM9 (RNA exonuclease 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00940 PE=3 SV=1)

HSP 1 Score: 627.1 bits (1616), Expect = 3.8e-176
Identity = 297/299 (99.33%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 1   GPLSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSDCYEE 60
           GPLSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSDCYEE
Sbjct: 32  GPLSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSDCYEE 91

Query: 61  DRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVT 120
           DRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVT
Sbjct: 92  DRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVT 151

Query: 121 GLKEEHMRYAMPLKNVQEKVLKLLLNGESIGKLRSNGGKAKLLVGHDLEHDLDCLRMNYP 180
           GLKEEH+RYAMPLKNVQEKVLKLLLNGESIG+LRSNGGKAKLLVGHDLEHDLDCLRMNYP
Sbjct: 152 GLKEEHLRYAMPLKNVQEKVLKLLLNGESIGRLRSNGGKAKLLVGHDLEHDLDCLRMNYP 211

Query: 181 DHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLD 240
           DHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLD
Sbjct: 212 DHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLD 271

Query: 241 HRRQVMTLSVTPSCIQYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDSRRVMQT 300
           HRRQVMTLSVTPSCIQYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDSRRVMQT
Sbjct: 272 HRRQVMTLSVTPSCIQYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDSRRVMQT 330

[Close]

BLAST of MELO3C003246.1 vs. ExPASy TrEMBL
Match: A0A1S3CNZ6 (RNA exonuclease 4 OS=Cucumis melo OX=3656 GN=LOC103503082 PE=3 SV=1)

HSP 1 Score: 620.2 bits (1598), Expect = 4.6e-174
Identity = 295/299 (98.66%), Postives = 297/299 (99.33%), Query Frame = 0


Query: 1   GPLSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSDCYEE 60
           GPLSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSD YEE
Sbjct: 2   GPLSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSDGYEE 61

Query: 61  DRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVT 120
           DRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVT
Sbjct: 62  DRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVT 121

Query: 121 GLKEEHMRYAMPLKNVQEKVLKLLLNGESIGKLRSNGGKAKLLVGHDLEHDLDCLRMNYP 180
           GLKEEH+RYAMPLKNVQEKVLKLLLNGESIG+LRSNGGKAKLLVGHDLEHDLDCLRMNYP
Sbjct: 122 GLKEEHLRYAMPLKNVQEKVLKLLLNGESIGRLRSNGGKAKLLVGHDLEHDLDCLRMNYP 181

Query: 181 DHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLD 240
           DHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLD
Sbjct: 182 DHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLD 241

Query: 241 HRRQVMTLSVTPSCIQYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDSRRVMQT 300
           HRRQVMT SVTPSCIQYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDSRRVMQT
Sbjct: 242 HRRQVMTRSVTPSCIQYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDSRRVMQT 300

[Close]

BLAST of MELO3C003246.1 vs. ExPASy TrEMBL
Match: A0A5A7TYQ2 (RNA exonuclease 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3741G00010 PE=3 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 8.8e-165
Identity = 280/284 (98.59%), Postives = 282/284 (99.30%), Query Frame = 0


Query: 16  GCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAMDCV 75
           GCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSD YEEDRSDRGLGAIAMDCV
Sbjct: 41  GCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSDGYEEDRSDRGLGAIAMDCV 100

Query: 76  MAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKN 135
           MAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEH+RYAMPLKN
Sbjct: 101 MAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHLRYAMPLKN 160

Query: 136 VQEKVLKLLLNGESIGKLRSNGGKAKLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMK 195
           VQEKVLKLLLNGESIG+LRSNGGKAKLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMK
Sbjct: 161 VQEKVLKLLLNGESIGRLRSNGGKAKLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMK 220

Query: 196 TNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLDHRRQVMTLSVTPSCI 255
           TNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLDHRRQVMT SVTPSCI
Sbjct: 221 TNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLDHRRQVMTRSVTPSCI 280

Query: 256 QYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDSRRVMQT 300
           QYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDSRRVMQT
Sbjct: 281 QYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDSRRVMQT 324

[Close]

BLAST of MELO3C003246.1 vs. TAIR 10
Match: AT2G48100.1 (Exonuclease family protein )

HSP 1 Score: 274.6 bits (701), Expect = 9.2e-74
Identity = 137/291 (47.08%), Postives = 188/291 (64.60%), Query Frame = 0


Query: 3   LSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSDCYEEDR 62
           LSK NC  IF+++GC LCL++ +    L+EH++ C ++ P   GTS      S       
Sbjct: 71  LSKGNCKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRPLGTSTQRNPSSSL----- 130

Query: 63  SDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGL 122
           +   L A+A+DC M GGG+DG +D C  +CLVD+DE +IF+T VQP +P+T+YRHE+TGL
Sbjct: 131 AGSRLKAMALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGL 190

Query: 123 KEEHMRYAMPLKNVQEKVLKLLLNGESIGKLRSNGGKAKLLVGHDLEHDLDCLRMNYPDH 182
            +E ++  MPL++V+E+V   L  G+      ++G    LLVGHDL HD+ CL++ YP H
Sbjct: 191 TKEDLKDGMPLEHVRERVFSFLCGGQ------NDGAGRLLLVGHDLRHDMSCLKLEYPSH 250

Query: 183 MLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLDHR 242
           +LRDTA+Y PLMKTNLVS SLKYLT++YLGY I+   H+ YE+CVS MRLYKRMR  +H 
Sbjct: 251 LLRDTAKYVPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEVYEDCVSAMRLYKRMRDQEH- 310

Query: 243 RQVMTLSVTPSCIQYVAPN-LDSHSAKDLEKMTPDELYEMSRTNFKCWCHD 293
                      C      N L+S    DLEKM  +ELY+ S + ++CWC D
Sbjct: 311 ----------VCSGKAEGNGLNSRKQSDLEKMNAEELYQKSTSEYRCWCLD 339

[Close]

BLAST of MELO3C003246.1 vs. TAIR 10
Match: AT2G48100.2 (Exonuclease family protein )

HSP 1 Score: 274.6 bits (701), Expect = 9.2e-74
Identity = 137/291 (47.08%), Postives = 188/291 (64.60%), Query Frame = 0


Query: 3   LSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSDCYEEDR 62
           LSK NC  IF+++GC LCL++ +    L+EH++ C ++ P   GTS      S       
Sbjct: 71  LSKGNCKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRPLGTSTQRNPSSSL----- 130

Query: 63  SDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGL 122
           +   L A+A+DC M GGG+DG +D C  +CLVD+DE +IF+T VQP +P+T+YRHE+TGL
Sbjct: 131 AGSRLKAMALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGL 190

Query: 123 KEEHMRYAMPLKNVQEKVLKLLLNGESIGKLRSNGGKAKLLVGHDLEHDLDCLRMNYPDH 182
            +E ++  MPL++V+E+V   L  G+      ++G    LLVGHDL HD+ CL++ YP H
Sbjct: 191 TKEDLKDGMPLEHVRERVFSFLCGGQ------NDGAGRLLLVGHDLRHDMSCLKLEYPSH 250

Query: 183 MLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLDHR 242
           +LRDTA+Y PLMKTNLVS SLKYLT++YLGY I+   H+ YE+CVS MRLYKRMR  +H 
Sbjct: 251 LLRDTAKYVPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEVYEDCVSAMRLYKRMRDQEH- 310

Query: 243 RQVMTLSVTPSCIQYVAPN-LDSHSAKDLEKMTPDELYEMSRTNFKCWCHD 293
                      C      N L+S    DLEKM  +ELY+ S + ++CWC D
Sbjct: 311 ----------VCSGKAEGNGLNSRKQSDLEKMNAEELYQKSTSEYRCWCLD 339

[Close]

BLAST of MELO3C003246.1 vs. TAIR 10
Match: AT2G48100.3 (Exonuclease family protein )

HSP 1 Score: 274.6 bits (701), Expect = 9.2e-74
Identity = 137/291 (47.08%), Postives = 188/291 (64.60%), Query Frame = 0


Query: 3   LSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDLSDCYEEDR 62
           LSK NC  IF+++GC LCL++ +    L+EH++ C ++ P   GTS      S       
Sbjct: 71  LSKGNCKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRPLGTSTQRNPSSSL----- 130

Query: 63  SDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGL 122
           +   L A+A+DC M GGG+DG +D C  +CLVD+DE +IF+T VQP +P+T+YRHE+TGL
Sbjct: 131 AGSRLKAMALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGL 190

Query: 123 KEEHMRYAMPLKNVQEKVLKLLLNGESIGKLRSNGGKAKLLVGHDLEHDLDCLRMNYPDH 182
            +E ++  MPL++V+E+V   L  G+      ++G    LLVGHDL HD+ CL++ YP H
Sbjct: 191 TKEDLKDGMPLEHVRERVFSFLCGGQ------NDGAGRLLLVGHDLRHDMSCLKLEYPSH 250

Query: 183 MLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMRSLDHR 242
           +LRDTA+Y PLMKTNLVS SLKYLT++YLGY I+   H+ YE+CVS MRLYKRMR  +H 
Sbjct: 251 LLRDTAKYVPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEVYEDCVSAMRLYKRMRDQEH- 310

Query: 243 RQVMTLSVTPSCIQYVAPN-LDSHSAKDLEKMTPDELYEMSRTNFKCWCHD 293
                      C      N L+S    DLEKM  +ELY+ S + ++CWC D
Sbjct: 311 ----------VCSGKAEGNGLNSRKQSDLEKMNAEELYQKSTSEYRCWCLD 339

[Close]

BLAST of MELO3C003246.1 vs. TAIR 10
Match: AT3G27970.1 (Exonuclease family protein )

HSP 1 Score: 273.5 bits (698), Expect = 2.0e-73
Identity = 136/299 (45.48%), Postives = 195/299 (65.22%), Query Frame = 0


Query: 1   GPLSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQG--TSLPPTDLSDCY 60
           GPL K  C  IFS +GC  C+ +L+ P +   HQ+ C  ++ V+ G  T +    L D  
Sbjct: 65  GPLPKQECKNIFSLRGCRFCMTILESPNSRRIHQERCQFSS-VNSGLTTRMAALGLRDKA 124

Query: 61  EED-RSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRH 120
             D  S R    +A+ C M GGGSDG+LD+C  +C+ DE + +IF+T+V+P + +T+YR+
Sbjct: 125 MIDYTSSRSPRVVALSCKMVGGGSDGSLDLCARVCITDESDNVIFHTYVKPSMAVTSYRY 184

Query: 121 EVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGKLRSNGGKAKLLVGHDLEHDLDCLRM 180
           E TG++ E++R AMPLK VQ K+ + L NGE + K+R  GGKA++LVGH L+HDLD L++
Sbjct: 185 ETTGIRPENLRDAMPLKQVQRKIQEFLCNGEPMWKIRPRGGKARILVGHGLDHDLDRLQL 244

Query: 181 NYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMR 240
            YP  M+RDTA+Y PLMKT+ +S+SLKYLT+AYLGYD+     DPYE+CV+ MRLY RMR
Sbjct: 245 EYPSSMIRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDVHFGIQDPYEDCVATMRLYTRMR 304

Query: 241 SLDHRRQVMTLSVTPSCIQYVAPNLDSHSA---KDLEKMTPDELYEMSRTNFKCWCHDS 294
              H+ +   L+         A N  +  A    + E+M+PDE+  +SR+++ CWC DS
Sbjct: 305 YQKHKIEAYPLAAD-------AQNRSNQVAWRQSEAERMSPDEMLSISRSDYYCWCLDS 355

[Close]

BLAST of MELO3C003246.1 vs. TAIR 10
Match: AT5G40310.1 (Exonuclease family protein )

HSP 1 Score: 266.2 bits (679), Expect = 3.3e-71
Identity = 132/296 (44.59%), Postives = 190/296 (64.19%), Query Frame = 0


Query: 1   GPLSKSNCSKIFSEQGCGLCLRVLDGPETLSEHQDICCITAPVHQGTSLPPTDL---SDC 60
           GPL K  C  IFS +GC  CL +L+ P     HQ+ C + + V  G  +    L   ++ 
Sbjct: 56  GPLPKQECKNIFSIRGCRFCLTILESPNARRIHQERCQL-SNVTSGLMIRMAALGLRNNS 115

Query: 61  YEEDRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRH 120
             +  S R    +A+ C M GGGSDG+LD+C  +C+ DE E ++F+T+V+P IP+TNYR+
Sbjct: 116 TIDYTSSRSPRVVALSCKMVGGGSDGSLDLCARVCITDESENVVFHTYVKPTIPVTNYRY 175

Query: 121 EVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGKLRSNGGKAKLLVGHDLEHDLDCLRM 180
           E+TG++ E++R AM LK+ Q KV + L NGE + K+R   GKA++LVGH L++ LD L++
Sbjct: 176 EMTGIRPENLRDAMRLKHAQRKVQEFLCNGEPMWKIRPRNGKARILVGHGLDNHLDSLQL 235

Query: 181 NYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYENCVSVMRLYKRMR 240
            Y   M+RDTA Y PLMK++ +S+SLKYLT+AYLGYDI     DPYE+CV+ MRLY RMR
Sbjct: 236 EYSSSMIRDTAEYPPLMKSSKLSNSLKYLTQAYLGYDIHVGIQDPYEDCVATMRLYTRMR 295

Query: 241 SLDHRRQVMTLSVTPSCIQYVAPNLDSHSAKDLEKMTPDELYEMSRTNFKCWCHDS 294
              HR +   L+           N  +    +LE+M+P+EL ++SR+++ CWC DS
Sbjct: 296 YQKHRAEAYPLASDTQNHN----NFAAWRQNELERMSPEELLDLSRSDYYCWCLDS 346

The following BLAST results are available for this feature:

BLAST of MELO3C003246.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0045030.1	1.6e-176	100.00	apoptosis-enhancing nuclease isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008449328.1	1.6e-176	100.00	PREDICTED: RNA exonuclease 4-like [Cucumis melo]	[more]
TYJ96296.1	7.8e-176	99.33	apoptosis-enhancing nuclease isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008465475.1	9.6e-174	98.66	PREDICTED: RNA exonuclease 4-like isoform X1 [Cucumis melo]	[more]
XP_011653750.1	1.1e-172	96.99	apoptosis-enhancing nuclease isoform X1 [Cucumis sativus] >XP_011653752.1 apopto...	[more]

BLAST of MELO3C003246.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q08237	1.4e-18	32.75	RNA exonuclease 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=55...	[more]
Q4IEV5	2.4e-18	31.82	RNA exonuclease 4 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9...	[more]
Q6CMT3	4.1e-18	32.34	RNA exonuclease 4 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 707...	[more]
Q9GZR2	1.6e-17	31.14	RNA exonuclease 4 OS=Homo sapiens OX=9606 GN=REXO4 PE=1 SV=2	[more]
Q7S9B7	3.5e-17	30.27	RNA exonuclease 4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708...	[more]

BLAST of MELO3C003246.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TPB9	7.6e-177	100.00	RNA exonuclease 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G001...	[more]
A0A1S3BLT2	7.6e-177	100.00	RNA exonuclease 4 OS=Cucumis melo OX=3656 GN=LOC103491238 PE=3 SV=1	[more]
A0A5D3BBM9	3.8e-176	99.33	RNA exonuclease 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G...	[more]
A0A1S3CNZ6	4.6e-174	98.66	RNA exonuclease 4 OS=Cucumis melo OX=3656 GN=LOC103503082 PE=3 SV=1	[more]
A0A5A7TYQ2	8.8e-165	98.59	RNA exonuclease 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3741G0...	[more]

BLAST of MELO3C003246.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G48100.1	9.2e-74	47.08	Exonuclease family protein	[more]
AT2G48100.2	9.2e-74	47.08	Exonuclease family protein	[more]
AT2G48100.3	9.2e-74	47.08	Exonuclease family protein	[more]
AT3G27970.1	2.0e-73	45.48	Exonuclease family protein	[more]
AT5G40310.1	3.3e-71	44.59	Exonuclease family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013520	Exonuclease, RNase T/DNA polymerase III	SMART	SM00479	exoiiiendus	coord: 68..242 e-value: 4.1E-25 score: 99.4
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 68..253 e-value: 1.1E-41 score: 144.4
None	No IPR available	PANTHER	PTHR12801	RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED	coord: 1..296
None	No IPR available	PANTHER	PTHR12801:SF123	EXONUCLEASE FAMILY PROTEIN	coord: 1..296
IPR037431	RNA exonuclease 4, DEDDh 3'-5' exonuclease domain	CDD	cd06144	REX4_like	coord: 70..234 e-value: 1.142E-69 score: 211.22
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 70..239

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C003246	MELO3C003246	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C003246.1:exon:255424	MELO3C003246.1:exon:255424	exon
MELO3C003246.1:exon:255423	MELO3C003246.1:exon:255423	exon
MELO3C003246.1:exon:255422	MELO3C003246.1:exon:255422	exon
MELO3C003246.1:exon:255421	MELO3C003246.1:exon:255421	exon
MELO3C003246.1:exon:255420	MELO3C003246.1:exon:255420	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C003246.1:three_prime_utr	MELO3C003246.1:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C003246.1:cds	MELO3C003246.1:cds	CDS
MELO3C003246.1:cds	MELO3C003246.1:cds_2	CDS
MELO3C003246.1:cds	MELO3C003246.1:cds_3	CDS
MELO3C003246.1:cds	MELO3C003246.1:cds_4	CDS
MELO3C003246.1:cds	MELO3C003246.1:cds_5	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C003246.1:five_prime_utr	MELO3C003246.1:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C003246.1	MELO3C003246.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
molecular_function	GO:0008408	3'-5' exonuclease activity
molecular_function	GO:0003676	nucleic acid binding