MELO3C001973.1 (mRNA) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGCTCTGTCTCATTTGAGAAATAATCTCAAGAGACTCCCCAACGAAGAGAAAGAAAGCAAAAGGGTTTTAGAGACACTCTTCTTCTGGGTTTTACCGCTTCTTCCCCACGACGCCAAGATGATTGCTGATAAGGGCAAGAAGGCCAAGCTCTCTGAAAAGCCCGAAGACGACAATTCTGAGGTCATCGATGAGAAACTCGTTATTTCCATCGAGAAGTTGCAGGAAATTCAAGACGAGCTCGAGAAGGTACTGATTCATTCAATGCTTCTTTAACTTTCTCACTCCTCCTTCTTTCTGCTGCTCTCTCTGTTTAATGTTGCCAGGAGATCAATGAACCCGAGACAAAAAAAACGTTACCTTGTGATCTATCATTTTTTTTATTTATTTTTTTATTTTTGGGTGCTCAGTTGAGCTTGTCCCGAGCTGAACGGAATTGGGTTCACATTGTCTTCTAAATATACTTCAATTGTTACCCAAAGCTTAAGGCTTTTTTTGTAGTCTTGTTGAAAAACGTCGTTGCCGACGTTTAATTTCTTTTACCTGCGCTTGGGAAATCTGTTTGTTCGTTCTTAAATTCATTAAGGTTGACTGGCTTAGTTCTTTGTGTGATTTATAATCTAATTCTAAAGTATGGCTGACAACTTATTTGAATTTTACATCCCATGTTACCTGGATAAAATGAATTGCGTTACGATAAATGTTAATCTTGAATTACACCCTGCGACTTCACTGTTCCTGGGACCAAACAGTTATGAAGTCTGCCTCTAACTCCGAAGTACTGTGCAAAGTTGCTATCTTTTTTATAGGGTGTATATTTAATTATATAGTATTACTGCTCTATTAAGAACGATTATATTCTACTGTTAATTACTGTTTTCCAGTAAGTTTGAGATAACTGCTGCTTTATGATCATGTTGTTTATTTGCCTTGATCTTCAAGATCAACGAGGAGGCCAGTGATAAAGTATTGGAAGTGGAACAGAAGTACAATGAAGTACGAAAACCTGTCTACGACAAGCGGAATGAGATTATCAAATCAATTCCTGACTTCTGGTTAACAGCGGTTTGTATTTCCTTCTCAAATCTGTCATCTTTGAACTAATTATGAACTTCTTGTCATGCTGATGAGTTTCATAACTGATTCTTCCTCCCTGTGTCCTATGATAAAAATAACTGTTTCTTCTTCAACTTGCAGTTCTTGAGTCATCCTGCTCTTTGTGAACTTTTAACCGAAGAGGACCAGAAGGTTTCATTTGTCTCCCTCGTTTTATATATTTGAGTTTTCAAAATTATAAATGAAATTGCAAGTAAAATACTGAATTTTAATAGTGAAGCTGATTTTGAATTCTCATAATCTTGTTTTAGTATCTTCTGTCCAAATGCCCATAAAATTGTTGTTGGTCATTTTGCTTTTGTTAGATATTCAAACATCTCACCTCCCTGGAAGTGGAAGATTTTAAAGATGTCAAATCGGGTTACTCAATTACTTTTGTGAGTTTGAATCATTGCCCTAACTTGCTCCTTTTCTGTTATGTTCCTACATTTTGCTTTTATTTTTTTTCTGTAGTGATTTCTTGTCCTTTGTGTCACTTACATTTATTTCTTTACGAGTATTTATTTTGTTTCTTTGATTCTACAGAACTTCAACACCAACCCTTATTTTGAAGATACAAAGCTGACGAAGACCTTCACCTTTCTTGATGAAGGAACTAGGAAAATCAATGCTACATCGATAAAATGGAAAGAGGGAATGGTGAGAAACTTTTTTATCTCCTTCCTAAAATAATGCTTGTATTAGTTCGTCAAATTATTTTCACTAACTGTCTACTGTACTCTGCATATCTGAAGGGTTTACCTAATGGGTTTAACCATGAGAAGAAAGGGAACAAACGACCTCAGGCTGAGGAAAGGTTGGTCACTAAACCTGTTAATCAATAATCACCGTTTAGAGACTATTCATTTATTTTTTATGTTTTATATTATTGGTTATATGTTAATTGTGAAAGCACCGTCACTAGACTATCTAATTTATGCTAGTTTGTTTGTTATACAAATTTGCGTGCATTTATGAGGCAACACCGGTGATTCAGTTTAGGTATTTGAGTCAAAACTCATGCTATGGTAGATTATGATCAGTATTATAAAAGGGCGACCTTGTGAGACATTTCATTATGGAAAAGGCACCGATAACTCTTACGGTTAAATGTGAGACACTGCCTAAATTTAAGAGAATGTTACTTCCCTACTATTTTTTTGGCAACTTTCTAAGCCGAGTCTGGCTTTATTCTCAATTTTTTGGTGTTATTAGAATTCAATAGACTGAATTGCTATGCATAGAGAATAGCTTTCTTGCATTTCATGAAAATAATTTCAGACTTTAGAAAGCATATAATCCTTTGAAACTGAGTAGAGCAAAGAACAAAAAGGAAAGATGCTTAATACAATAACCTAATGATAGAACTCTTTCTATTTTTAATTAGAGAGGTTTAGAGCTCCCTACCTCTCCACTCTTTCCTAACCACTAGTCGAAAAGACATCGTCTTTCTCACTGCATCCGACCATGTACAAGATAAATGTTAGTTTAAGCATGAGTGTTCATAAGAGAGGGAGGGACCAAGTACCTTAAATTACTTGGTTATCTTGTACTTCTTTTAACTTTGGGTTCTATCAAAATTCCTATCCAATATCAAGAAAATGAGCTATCTTAGAAACCCTGATGCATTTAAATGATTAAAACTTTGAGAGGAGGTAAAAAGAGAGGAAAAGAAACTTCTAGTTGCTGATAGTGGAGATGACTGAGAACTGAAGTACAAACAATTAGAGATGGGGAAATCACTGACTGAGCTATGAAAGGAACACAGAGAGAGGAATAGGTGGGAGGGACAAAATCTATGTCGTAGTCATAATTTAGATGGTGTTCTATTTTCTCTCATCACCTCTTCTTTCGTTTTCTTTCCAATTGTCTCTTTAATCAGATTTCAGATTCAAGGGACATCAAGAGATTCAATTGACTGTCTCAAGTGTTAGTCTGATGTCATATACTCACAGCTATGATCTTATTTTTAAAAAACGCATTTCCTAGTGACATACCTCCTACGTATGAAATGAACAAAATGCCTACAACTTTCGTTAAAAGGAAAATAATTCATTGGACCTCACTGGTAGCACTCTTTTTCCTGTTTTGGGTGCAGCTTTTTTAGCTGGTTCAGTGATACAGAACAGAAAGATATTGATGACTTCCATGATGAGGTATTATGAAAACATATTGCACATTTACATCACCCCCACAAAAATTTCATTTCTTTTATATGTCATTTGCATCACTCAGAGGCAGGCGTTTACATAGCTGACCAGAACAGAAATTTTCTCATTTCAAAAAGATGAATACTGTAATCTTTATGACGAGATATCCTTTTCACTTCAAAGTAAAAAGCTGTATTTTGAAATTTTCTCTGGGTTGCAGGTTGCGGAAATTATCAAGGAGGATTTATGGCCTAACCCTTTATCCTACTTCAATAACGTATGTTTCTTTCTGCTGCATAGGTTTCTTTTCTCAGCACACAAGCTGAAATTGTACTTAATTAATGTTGGCTACATTTACTATTTTTTCTAACAGTTGCTGTACTGTGATACAGGAGGCTGATGAAGATGAATTGGATGAAGACGAATCTAATGAAGAGGTGAAGAAAAACAAATTACGGGCCTTTTTTAGACCCCTGATTAAGGCAGCTAATTCATTGTGTTTGGCTGTTGGATAGTTCAATAGATCGCTGTTCTATAATCGTTTGTGTGTTTGTTTATCCCTTGCTATCTTCTTCACCAATACCATAATTTTGTGTTTTGGTACTTCTTCAGGGAAAAGAAGATGACGACTCAGATGATGATGACGACGATCAAGATGATGACAATGATGCTGGTGATGATGAGGATGATGACTAAGATGACTAGTGAAGTTTAATGCATCTCTTCAAATGGCTCATTTCTGTAATAGTTGCTCAAGTATCAGTTGGTAAAGGAGAATCGTTTCTTGTGGTAGCCTTCTTCCGGTCGTGGTAGGGTAACGGTTTGTAAGTTCAGTTGGTCAGGCATTTCGACTCGACTCTACTTTCTCCCTAAGAGCCCTTTCCTTTTCTCCTTCCTCGTTGCGTAAATTACTCTCTAATATATAGGTTGATGAGGATATTTATGGTTTTTTAATCTTATGTTTTGTTCTAATGCTAACATTGGAGAAAGTATTTTGATGTGTAAAGTTATTTTGAACTCCCCCTTAATGCATATGTTATTAATTGTGTTACTAATTACTATTGCCACCCCTCTCAAAGCTTCACTGCTAATGGTGACCTATGGTTCTTTTCTGCCATGGCTGGTGTTCCTGAAGAACCAAAACCATAGCAAGTACTTTGTGCATCTTGAGCGTTCATAGGACACACCATCTGCTTCCAAGTTTTAGTTTTCCTTTTTTTTTTTTCTGTCATATCAAACATTTAATGC GAGCTCTGTCTCATTTGAGAAATAATCTCAAGAGACTCCCCAACGAAGAGAAAGAAAGCAAAAGGGTTTTAGAGACACTCTTCTTCTGGGTTTTACCGCTTCTTCCCCACGACGCCAAGATGATTGCTGATAAGGGCAAGAAGGCCAAGCTCTCTGAAAAGCCCGAAGACGACAATTCTGAGGTCATCGATGAGAAACTCGTTATTTCCATCGAGAAGTTGCAGGAAATTCAAGACGAGCTCGAGAAGATCAACGAGGAGGCCAGTGATAAAGTATTGGAAGTGGAACAGAAGTACAATGAAGTACGAAAACCTGTCTACGACAAGCGGAATGAGATTATCAAATCAATTCCTGACTTCTGGTTAACAGCGTTCTTGAGTCATCCTGCTCTTTGTGAACTTTTAACCGAAGAGGACCAGAAGATATTCAAACATCTCACCTCCCTGGAAGTGGAAGATTTTAAAGATGTCAAATCGGGTTACTCAATTACTTTTAACTTCAACACCAACCCTTATTTTGAAGATACAAAGCTGACGAAGACCTTCACCTTTCTTGATGAAGGAACTAGGAAAATCAATGCTACATCGATAAAATGGAAAGAGGGAATGGGTTTACCTAATGGGTTTAACCATGAGAAGAAAGGGAACAAACGACCTCAGGCTGAGGAAAGCTTTTTTAGCTGGTTCAGTGATACAGAACAGAAAGATATTGATGACTTCCATGATGAGGTATTATGAAAACATATTGCACATTTACATCACCCCCACAAAAATTTCATTTCTTTTATATGTCATTTGCATCACTCAGAGGCAGGCGTTTACATAGCTGACCAGAACAGAAATTTTCTCATTTCAAAAAGATGAATACTGTAATCTTTATGACGAGATATCCTTTTCACTTCAAAGTAAAAAGCTGTATTTTGAAATTTTCTCTGGGTTGCAGGTTGCGGAAATTATCAAGGAGGATTTATGGCCTAACCCTTTATCCTACTTCAATAACGAGGCTGATGAAGATGAATTGGATGAAGACGAATCTAATGAAGAGGGAAAAGAAGATGACGACTCAGATGATGATGACGACGATCAAGATGATGACAATGATGCTGGTGATGATGAGGATGATGACTAAGATGACTAGTGAAGTTTAATGCATCTCTTCAAATGGCTCATTTCTGTAATAGTTGCTCAAGTATCAGTTGGTAAAGGAGAATCGTTTCTTGTGGTAGCCTTCTTCCGGTCGTGGTAGGGTAACGGTTTGTAAGTTCAGTTGGTCAGGCATTTCGACTCGACTCTACTTTCTCCCTAAGAGCCCTTTCCTTTTCTCCTTCCTCGTTGCGTAAATTACTCTCTAATATATAGGTTGATGAGGATATTTATGGTTTTTTAATCTTATGTTTTGTTCTAATGCTAACATTGGAGAAAGTATTTTGATGTGTAAAGTTATTTTGAACTCCCCCTTAATGCATATGTTATTAATTGTGTTACTAATTACTATTGCCACCCCTCTCAAAGCTTCACTGCTAATGGTGACCTATGGTTCTTTTCTGCCATGGCTGGTGTTCCTGAAGAACCAAAACCATAGCAAGTACTTTGTGCATCTTGAGCGTTCATAGGACACACCATCTGCTTCCAAGTTTTAGTTTTCCTTTTTTTTTTTTCTGTCATATCAAACATTTAATGC GCTCTGTCTCATTTGAGAAATAATCTCAAGAGACTCCCCAACGAAGAGAAAGAAAGCAAAAGGGTTTTAGAGACACTCTTCTTCTGGGTTTTACCGCTTCTTCCCCACGACGCCAAGATGATTGCTGATAAGGGCAAGAAGGCCAAGCTCTCTGAAAAGCCCGAAGACGACAATTCTGAGGTCATCGATGAGAAACTCGTTATTTCCATCGAGAAGTTGCAGGAAATTCAAGACGAGCTCGAGAAGATCAACGAGGAGGCCAGTGATAAAGTATTGGAAGTGGAACAGAAGTACAATGAAGTACGAAAACCTGTCTACGACAAGCGGAATGAGATTATCAAATCAATTCCTGACTTCTGGTTAACAGCGTTCTTGAGTCATCCTGCTCTTTGTGAACTTTTAACCGAAGAGGACCAGAAGATATTCAAACATCTCACCTCCCTGGAAGTGGAAGATTTTAAAGATGTCAAATCGGGTTACTCAATTACTTTTAACTTCAACACCAACCCTTATTTTGAAGATACAAAGCTGACGAAGACCTTCACCTTTCTTGATGAAGGAACTAGGAAAATCAATGCTACATCGATAAAATGGAAAGAGGGAATGGGTTTACCTAATGGGTTTAACCATGAGAAGAAAGGGAACAAACGACCTCAGGCTGAGGAAAGCTTTTTTAGCTGGTTCAGTGATACAGAACAGAAAGATATTGATGACTTCCATGATGAGGTATTATGA ALSHLRNNLKRLPNEEKESKRVLETLFFWVLPLLPHDAKMIADKGKKAKLSEKPEDDNSEVIDEKLVISIEKLQEIQDELEKINEEASDKVLEVEQKYNEVRKPVYDKRNEIIKSIPDFWLTAFLSHPALCELLTEEDQKIFKHLTSLEVEDFKDVKSGYSITFNFNTNPYFEDTKLTKTFTFLDEGTRKINATSIKWKEGMGLPNGFNHEKKGNKRPQAEESFFSWFSDTEQKDIDDFHDEVL Homology
BLAST of MELO3C001973.1 vs. ExPASy Swiss-Prot
Match: Q9CA59 (NAP1-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=NRP1 PE=1 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 5.2e-80 Identity = 153/207 (73.91%), Postives = 179/207 (86.47%), Query Frame = 0
BLAST of MELO3C001973.1 vs. ExPASy Swiss-Prot
Match: Q8LC68 (NAP1-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=NRP2 PE=1 SV=2) HSP 1 Score: 293.1 bits (749), Expect = 2.9e-78 Identity = 154/206 (74.76%), Postives = 174/206 (84.47%), Query Frame = 0
BLAST of MELO3C001973.1 vs. ExPASy Swiss-Prot
Match: Q69JW2 (NAP1-related protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0576700 PE=2 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 3.2e-69 Identity = 139/204 (68.14%), Postives = 169/204 (82.84%), Query Frame = 0
BLAST of MELO3C001973.1 vs. ExPASy Swiss-Prot
Match: B8AEC1 (NAP1-related protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_07785 PE=2 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 9.3e-69 Identity = 139/204 (68.14%), Postives = 168/204 (82.35%), Query Frame = 0
BLAST of MELO3C001973.1 vs. ExPASy Swiss-Prot
Match: A2XU85 (NAP1-related protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=H0219H12.3 PE=3 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 1.2e-60 Identity = 118/185 (63.78%), Postives = 149/185 (80.54%), Query Frame = 0
BLAST of MELO3C001973.1 vs. NCBI nr
Match: XP_008441189.1 (PREDICTED: NAP1-related protein 2 [Cucumis melo]) HSP 1 Score: 402.9 bits (1034), Expect = 2.0e-108 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0
BLAST of MELO3C001973.1 vs. NCBI nr
Match: TYJ98882.1 (NAP1-related protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 402.9 bits (1034), Expect = 2.0e-108 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0
BLAST of MELO3C001973.1 vs. NCBI nr
Match: KAA0036075.1 (NAP1-related protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 402.9 bits (1034), Expect = 2.0e-108 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0
BLAST of MELO3C001973.1 vs. NCBI nr
Match: XP_011649718.1 (NAP1-related protein 2 [Cucumis sativus] >KGN63994.2 hypothetical protein Csa_013089 [Cucumis sativus]) HSP 1 Score: 400.2 bits (1027), Expect = 1.3e-107 Identity = 202/204 (99.02%), Postives = 203/204 (99.51%), Query Frame = 0
BLAST of MELO3C001973.1 vs. NCBI nr
Match: XP_038895495.1 (NAP1-related protein 2-like [Benincasa hispida]) HSP 1 Score: 399.1 bits (1024), Expect = 2.8e-107 Identity = 202/204 (99.02%), Postives = 202/204 (99.02%), Query Frame = 0
BLAST of MELO3C001973.1 vs. ExPASy TrEMBL
Match: A0A5A7T3L8 (NAP1-related protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold112G00690 PE=3 SV=1) HSP 1 Score: 402.9 bits (1034), Expect = 9.5e-109 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0
BLAST of MELO3C001973.1 vs. ExPASy TrEMBL
Match: A0A5D3BGI8 (NAP1-related protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00780 PE=3 SV=1) HSP 1 Score: 402.9 bits (1034), Expect = 9.5e-109 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0
BLAST of MELO3C001973.1 vs. ExPASy TrEMBL
Match: A0A1S3B3H8 (NAP1-related protein 2 OS=Cucumis melo OX=3656 GN=LOC103485375 PE=3 SV=1) HSP 1 Score: 402.9 bits (1034), Expect = 9.5e-109 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0
BLAST of MELO3C001973.1 vs. ExPASy TrEMBL
Match: A0A6J1GB40 (NAP1-related protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111452557 PE=3 SV=1) HSP 1 Score: 396.4 bits (1017), Expect = 8.9e-107 Identity = 199/204 (97.55%), Postives = 202/204 (99.02%), Query Frame = 0
BLAST of MELO3C001973.1 vs. ExPASy TrEMBL
Match: A0A6J1K926 (NAP1-related protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111493377 PE=3 SV=1) HSP 1 Score: 393.3 bits (1009), Expect = 7.5e-106 Identity = 198/204 (97.06%), Postives = 201/204 (98.53%), Query Frame = 0
BLAST of MELO3C001973.1 vs. TAIR 10
Match: AT1G74560.1 (NAP1-related protein 1 ) HSP 1 Score: 298.9 bits (764), Expect = 3.7e-81 Identity = 153/207 (73.91%), Postives = 179/207 (86.47%), Query Frame = 0
BLAST of MELO3C001973.1 vs. TAIR 10
Match: AT1G74560.3 (NAP1-related protein 1 ) HSP 1 Score: 298.9 bits (764), Expect = 3.7e-81 Identity = 153/207 (73.91%), Postives = 179/207 (86.47%), Query Frame = 0
BLAST of MELO3C001973.1 vs. TAIR 10
Match: AT1G74560.2 (NAP1-related protein 1 ) HSP 1 Score: 297.0 bits (759), Expect = 1.4e-80 Identity = 152/206 (73.79%), Postives = 178/206 (86.41%), Query Frame = 0
BLAST of MELO3C001973.1 vs. TAIR 10
Match: AT1G18800.1 (NAP1-related protein 2 ) HSP 1 Score: 292.0 bits (746), Expect = 4.5e-79 Identity = 153/204 (75.00%), Postives = 173/204 (84.80%), Query Frame = 0
BLAST of MELO3C001973.1 vs. TAIR 10
Match: AT2G19480.1 (nucleosome assembly protein 1;2 ) HSP 1 Score: 79.0 bits (193), Expect = 6.0e-15 Identity = 61/209 (29.19%), Postives = 103/209 (49.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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