MELO3C001754.1 (mRNA) Melon (DHL92) v4

Overview
NameMELO3C001754.1
TypemRNA
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr01: 10405952 .. 10406113 (-)
Sequence length162
RNA-Seq ExpressionMELO3C001754.1
SyntenyMELO3C001754.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAACGCCGCCGCCGTCTGTCCATTTTTCCACCGTCGACGCCTCCCAGCTGTCGTTCGTCACGATCGTCGGACGCCGGAGAACCACCGCTCGCGATTGCCCGTTTCGCGCTGCAAAGACCCGACCGAAACCCGTTTCGGTCCGAGCCACACAAGCCGGGTGA

mRNA sequence

ccaacgccgccgccgtctgtccatttttccaccgtcgacgcctcccagctgtcgttcgtcacgatcgtcggacgccggagaaccaccgctcgcgattgcccgtttcgcgctgcaaagacccgaccgaaacccgtttcggtccgagccacacaagccgggtga

Coding sequence (CDS)

CCAACGCCGCCGCCGTCTGTCCATTTTTCCACCGTCGACGCCTCCCAGCTGTCGTTCGTCACGATCGTCGGACGCCGGAGAACCACCGCTCGCGATTGCCCGTTTCGCGCTGCAAAGACCCGACCGAAACCCGTTTCGGTCCGAGCCACACAAGCCGGGTGA

Protein sequence

PTPPPSVHFSTVDASQLSFVTIVGRRRTTARDCPFRAAKTRPKPVSVRATQAG
Homology
The following BLAST results are available for this feature:
BLAST of MELO3C001754.1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C001754.1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C001754.1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C001754.1 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012314Peptidase M12B, GON-ADAMTSsPROSITEPS51046GONcoord: 1..53
score: 8.540886

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C001754MELO3C001754gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C001754.1:exon:11275MELO3C001754.1:exon:11275exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C001754.1:cdsMELO3C001754.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C001754.1MELO3C001754.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008270 zinc ion binding