MELO3C000817.1 (mRNA) Melon (DHL92) v4

Overview
NameMELO3C000817.1
TypemRNA
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionMagnesium transporter
Locationchr06: 23599302 .. 23599587 (+)
Sequence length186
RNA-Seq ExpressionMELO3C000817.1
SyntenyMELO3C000817.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGGAGCTCTTTTTAAGTTCTGGTACTGTTTGTTTGTCTATCTATTCTTTGGTGAGTGCAATATTCGGCATGAACATTCCTTACACTTGGAATGACGATCATGGATACATGTTTAAATGGGTATGCTAAAGGACTCGACTTTGATTTCTGACTTGAAATGCAGGAAACTGAGACTCCGATCTAGTGCTTACAACAATCATCTTGTTTTCATTATGTGCAGGTTGTCATTGTTGCTGGATTTGCTTCCGCGGTGTTGTTCATCACAATTATTTACTATGCTCGCTAA

mRNA sequence

TTGGAGCTCTTTTTAAGTTCTGGTACTGTTTGTTTGTCTATCTATTCTTTGGTGAGTGCAATATTCGGCATGAACATTCCTTACACTTGGAATGACGATCATGGATACATGTTTAAATGGGTTGTCATTGTTGCTGGATTTGCTTCCGCGGTGTTGTTCATCACAATTATTTACTATGCTCGCTAA

Coding sequence (CDS)

ATGAACATTCCTTACACTTGGAATGACGATCATGGATACATGTTTAAATGGGTTGTCATTGTTGCTGGATTTGCTTCCGCGGTGTTGTTCATCACAATTATTTACTATGCTCGCTAA

Protein sequence

MNIPYTWNDDHGYMFKWVVIVAGFASAVLFITIIYYAR
Homology
[Close]
BLAST of MELO3C000817.1 vs. NCBI nr
Match: KAA0057488.1 (magnesium transporter CorA-like family protein [Cucumis melo var. makuwa])

HSP 1 Score: 82.8 bits (203), Expect = 7.0e-13
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 0 

Query: 1   MNIPYTWNDDHGYMFKWVVIVAGFASAVLFITIIYYAR 39
           MNIPYTWNDDHGYMFKWVVIVAGFASAVLFITIIYYAR
Sbjct: 372 MNIPYTWNDDHGYMFKWVVIVAGFASAVLFITIIYYAR 409

[Close]
BLAST of MELO3C000817.1 vs. NCBI nr
Match: ADN34078.1 (magnesium transporter [Cucumis melo subsp. melo])

HSP 1 Score: 82.8 bits (203), Expect = 7.0e-13
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 0 

Query: 1   MNIPYTWNDDHGYMFKWVVIVAGFASAVLFITIIYYAR 39
           MNIPYTWNDDHGYMFKWVVIVAGFASAVLFITIIYYAR
Sbjct: 232 MNIPYTWNDDHGYMFKWVVIVAGFASAVLFITIIYYAR 269

[Close]
BLAST of MELO3C000817.1 vs. NCBI nr
Match: XP_038875645.1 (magnesium transporter MRS2-2-like [Benincasa hispida])

HSP 1 Score: 76.6 bits (187), Expect = 5.0e-11
Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = 0 

Query: 1   MNIPYTWNDDHGYMFKWVVIVAGFASAVLFITIIYYAR 39
           MNIPYTWNDDHGYMFKWVVIV+G A AVLF+TIIYYAR
Sbjct: 349 MNIPYTWNDDHGYMFKWVVIVSGVACAVLFVTIIYYAR 386

[Close]
BLAST of MELO3C000817.1 vs. NCBI nr
Match: XP_022138806.1 (magnesium transporter MRS2-2-like [Momordica charantia])

HSP 1 Score: 73.9 bits (180), Expect = 3.3e-10
Identity = 33/38 (86.84%), Postives = 34/38 (89.47%), Query Frame = 0 

Query: 1   MNIPYTWNDDHGYMFKWVVIVAGFASAVLFITIIYYAR 39
           MNIPYTWNDDHGYMFKWVVIV G A AV+FI IIYYAR
Sbjct: 349 MNIPYTWNDDHGYMFKWVVIVTGVACAVMFIAIIYYAR 386

[Close]
BLAST of MELO3C000817.1 vs. NCBI nr
Match: XP_004150432.1 (magnesium transporter MRS2-I [Cucumis sativus] >KGN61641.1 hypothetical protein Csa_006619 [Cucumis sativus])

HSP 1 Score: 73.6 bits (179), Expect = 4.2e-10
Identity = 32/38 (84.21%), Postives = 36/38 (94.74%), Query Frame = 0 

Query: 1   MNIPYTWNDDHGYMFKWVVIVAGFASAVLFITIIYYAR 39
           MNIPYTWND HG++FKWVVI++GFA AVLFITIIYYAR
Sbjct: 349 MNIPYTWNDGHGFIFKWVVIISGFACAVLFITIIYYAR 386

[Close]
BLAST of MELO3C000817.1 vs. ExPASy Swiss-Prot
Match: B8AJT9 (Magnesium transporter MRS2-I OS=Oryza sativa subsp. indica OX=39946 GN=MRS2-I PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.3e-09
Identity = 25/38 (65.79%), Postives = 33/38 (86.84%), Query Frame = 0 

Query: 1   MNIPYTWNDDHGYMFKWVVIVAGFASAVLFITIIYYAR 39
           MNIPYTWND+HGY+FKWVV+V+G   A +F++I+ YAR
Sbjct: 337 MNIPYTWNDNHGYVFKWVVLVSGLFCAFMFVSIVAYAR 374

[Close]
BLAST of MELO3C000817.1 vs. ExPASy Swiss-Prot
Match: Q10D38 (Magnesium transporter MRS2-I OS=Oryza sativa subsp. japonica OX=39947 GN=MRS2-I PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.3e-09
Identity = 25/38 (65.79%), Postives = 33/38 (86.84%), Query Frame = 0 

Query: 1   MNIPYTWNDDHGYMFKWVVIVAGFASAVLFITIIYYAR 39
           MNIPYTWND+HGY+FKWVV+V+G   A +F++I+ YAR
Sbjct: 340 MNIPYTWNDNHGYVFKWVVLVSGLFCAFMFVSIVAYAR 377

[Close]
BLAST of MELO3C000817.1 vs. ExPASy Swiss-Prot
Match: Q9FLG2 (Magnesium transporter MRS2-2 OS=Arabidopsis thaliana OX=3702 GN=MRS2-2 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 4.6e-07
Identity = 24/38 (63.16%), Postives = 29/38 (76.32%), Query Frame = 0 

Query: 1   MNIPYTWNDDHGYMFKWVVIVAGFASAVLFITIIYYAR 39
           MNIPYTWND HGYMFK+VV + G    V+F+ I+ YAR
Sbjct: 350 MNIPYTWNDGHGYMFKYVVGLTGTLCVVVFVIIMSYAR 387

[Close]
BLAST of MELO3C000817.1 vs. ExPASy Swiss-Prot
Match: Q304A0 (Magnesium transporter MRS2-7 OS=Arabidopsis thaliana OX=3702 GN=MRS2-7 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 4.6e-07
Identity = 24/38 (63.16%), Postives = 28/38 (73.68%), Query Frame = 0 

Query: 1   MNIPYTWNDDHGYMFKWVVIVAGFASAVLFITIIYYAR 39
           MNIP TWN DHGY+FKWVV + G    VLF+ I+ YAR
Sbjct: 342 MNIPNTWNHDHGYIFKWVVSLTGTFCIVLFVIILSYAR 379

[Close]
BLAST of MELO3C000817.1 vs. ExPASy TrEMBL
Match: A0A5A7UQU3 (Magnesium transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G003740 PE=3 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.4e-13
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 0 

Query: 1   MNIPYTWNDDHGYMFKWVVIVAGFASAVLFITIIYYAR 39
           MNIPYTWNDDHGYMFKWVVIVAGFASAVLFITIIYYAR
Sbjct: 372 MNIPYTWNDDHGYMFKWVVIVAGFASAVLFITIIYYAR 409

[Close]
BLAST of MELO3C000817.1 vs. ExPASy TrEMBL
Match: E5GC79 (Magnesium transporter OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.4e-13
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 0 

Query: 1   MNIPYTWNDDHGYMFKWVVIVAGFASAVLFITIIYYAR 39
           MNIPYTWNDDHGYMFKWVVIVAGFASAVLFITIIYYAR
Sbjct: 232 MNIPYTWNDDHGYMFKWVVIVAGFASAVLFITIIYYAR 269

[Close]
BLAST of MELO3C000817.1 vs. ExPASy TrEMBL
Match: A0A6J1CAT1 (Magnesium transporter OS=Momordica charantia OX=3673 GN=LOC111009882 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.6e-10
Identity = 33/38 (86.84%), Postives = 34/38 (89.47%), Query Frame = 0 

Query: 1   MNIPYTWNDDHGYMFKWVVIVAGFASAVLFITIIYYAR 39
           MNIPYTWNDDHGYMFKWVVIV G A AV+FI IIYYAR
Sbjct: 349 MNIPYTWNDDHGYMFKWVVIVTGVACAVMFIAIIYYAR 386

[Close]
BLAST of MELO3C000817.1 vs. ExPASy TrEMBL
Match: A0A0A0LNR4 (Magnesium transporter OS=Cucumis sativus OX=3659 GN=Csa_2G199910 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.1e-10
Identity = 32/38 (84.21%), Postives = 36/38 (94.74%), Query Frame = 0 

Query: 1   MNIPYTWNDDHGYMFKWVVIVAGFASAVLFITIIYYAR 39
           MNIPYTWND HG++FKWVVI++GFA AVLFITIIYYAR
Sbjct: 349 MNIPYTWNDGHGFIFKWVVIISGFACAVLFITIIYYAR 386

[Close]
BLAST of MELO3C000817.1 vs. ExPASy TrEMBL
Match: A0A6J1EQA3 (Magnesium transporter OS=Cucurbita moschata OX=3662 GN=LOC111436840 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.7e-10
Identity = 31/38 (81.58%), Postives = 35/38 (92.11%), Query Frame = 0 

Query: 1   MNIPYTWNDDHGYMFKWVVIVAGFASAVLFITIIYYAR 39
           MNIPYTWNDDHGYMFKWVVIV+G A A+LF+ I+YYAR
Sbjct: 341 MNIPYTWNDDHGYMFKWVVIVSGVACALLFVVIVYYAR 378

[Close]
BLAST of MELO3C000817.1 vs. TAIR 10
Match: AT5G09690.1 (magnesium transporter 7 )

HSP 1 Score: 53.9 bits (128), Expect = 3.2e-08
Identity = 24/38 (63.16%), Postives = 28/38 (73.68%), Query Frame = 0 

Query: 1   MNIPYTWNDDHGYMFKWVVIVAGFASAVLFITIIYYAR 39
           MNIP TWN DHGY+FKWVV + G    VLF+ I+ YAR
Sbjct: 342 MNIPNTWNHDHGYIFKWVVSLTGTFCIVLFVIILSYAR 379

[Close]
BLAST of MELO3C000817.1 vs. TAIR 10
Match: AT5G64560.1 (magnesium transporter 9 )

HSP 1 Score: 53.9 bits (128), Expect = 3.2e-08
Identity = 24/38 (63.16%), Postives = 29/38 (76.32%), Query Frame = 0 

Query: 1   MNIPYTWNDDHGYMFKWVVIVAGFASAVLFITIIYYAR 39
           MNIPYTWND HGYMFK+VV + G    V+F+ I+ YAR
Sbjct: 350 MNIPYTWNDGHGYMFKYVVGLTGTLCVVVFVIIMSYAR 387

[Close]
BLAST of MELO3C000817.1 vs. TAIR 10
Match: AT5G09690.2 (magnesium transporter 7 )

HSP 1 Score: 53.9 bits (128), Expect = 3.2e-08
Identity = 24/38 (63.16%), Postives = 28/38 (73.68%), Query Frame = 0 

Query: 1   MNIPYTWNDDHGYMFKWVVIVAGFASAVLFITIIYYAR 39
           MNIP TWN DHGY+FKWVV + G    VLF+ I+ YAR
Sbjct: 353 MNIPNTWNHDHGYIFKWVVSLTGTFCIVLFVIILSYAR 390

[Close]
BLAST of MELO3C000817.1 vs. TAIR 10
Match: AT5G09690.4 (magnesium transporter 7 )

HSP 1 Score: 53.9 bits (128), Expect = 3.2e-08
Identity = 24/38 (63.16%), Postives = 28/38 (73.68%), Query Frame = 0 

Query: 1   MNIPYTWNDDHGYMFKWVVIVAGFASAVLFITIIYYAR 39
           MNIP TWN DHGY+FKWVV + G    VLF+ I+ YAR
Sbjct: 327 MNIPNTWNHDHGYIFKWVVSLTGTFCIVLFVIILSYAR 364

[Close]
BLAST of MELO3C000817.1 vs. TAIR 10
Match: AT5G64560.2 (magnesium transporter 9 )

HSP 1 Score: 43.1 bits (100), Expect = 5.7e-05
Identity = 16/18 (88.89%), Postives = 17/18 (94.44%), Query Frame = 0 

Query: 1   MNIPYTWNDDHGYMFKWV 19
           MNIPYTWND HGYMFK+V
Sbjct: 350 MNIPYTWNDGHGYMFKYV 367

The following BLAST results are available for this feature:
BLAST of MELO3C000817.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0057488.17.0e-13100.00magnesium transporter CorA-like family protein [Cucumis melo var. makuwa][more]
ADN34078.17.0e-13100.00magnesium transporter [Cucumis melo subsp. melo][more]
XP_038875645.15.0e-1189.47magnesium transporter MRS2-2-like [Benincasa hispida][more]
XP_022138806.13.3e-1086.84magnesium transporter MRS2-2-like [Momordica charantia][more]
XP_004150432.14.2e-1084.21magnesium transporter MRS2-I [Cucumis sativus] >KGN61641.1 hypothetical protein ... [more]
BLAST of MELO3C000817.1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
B8AJT91.3e-0965.79Magnesium transporter MRS2-I OS=Oryza sativa subsp. indica OX=39946 GN=MRS2-I PE... [more]
Q10D381.3e-0965.79Magnesium transporter MRS2-I OS=Oryza sativa subsp. japonica OX=39947 GN=MRS2-I ... [more]
Q9FLG24.6e-0763.16Magnesium transporter MRS2-2 OS=Arabidopsis thaliana OX=3702 GN=MRS2-2 PE=2 SV=1[more]
Q304A04.6e-0763.16Magnesium transporter MRS2-7 OS=Arabidopsis thaliana OX=3702 GN=MRS2-7 PE=2 SV=1[more]
BLAST of MELO3C000817.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UQU33.4e-13100.00Magnesium transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold28... [more]
E5GC793.4e-13100.00Magnesium transporter OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1[more]
A0A6J1CAT11.6e-1086.84Magnesium transporter OS=Momordica charantia OX=3673 GN=LOC111009882 PE=3 SV=1[more]
A0A0A0LNR42.1e-1084.21Magnesium transporter OS=Cucumis sativus OX=3659 GN=Csa_2G199910 PE=3 SV=1[more]
A0A6J1EQA32.7e-1081.58Magnesium transporter OS=Cucurbita moschata OX=3662 GN=LOC111436840 PE=3 SV=1[more]
BLAST of MELO3C000817.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G09690.13.2e-0863.16magnesium transporter 7 [more]
AT5G64560.13.2e-0863.16magnesium transporter 9 [more]
AT5G09690.23.2e-0863.16magnesium transporter 7 [more]
AT5G09690.43.2e-0863.16magnesium transporter 7 [more]
AT5G64560.25.7e-0588.89magnesium transporter 9 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13890:SF43MAGNESIUM TRANSPORTER MRS2-Icoord: 1..38
IPR039204Magnesium transporter MRS2-likePANTHERPTHR13890RNA SPLICING PROTEIN MRS2, MITOCHONDRIALcoord: 1..38

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C000817MELO3C000817gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C000817.1:exon:182126MELO3C000817.1:exon:182126exon
MELO3C000817.1:exon:182127MELO3C000817.1:exon:182127exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C000817.1:five_prime_utrMELO3C000817.1:five_prime_utrfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C000817.1:cdsMELO3C000817.1:cdsCDS
MELO3C000817.1:cdsMELO3C000817.1:cds_2CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C000817.1MELO3C000817.1-proteinpolypeptide