MELO.jh100344.1.t1 (mRNA) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh100344.1.t1
Type	mRNA
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Pentatricopeptide repeat-containing protein
Location	chr03: 6334702 .. 6336380 (-)
Sequence length	1023
RNA-Seq Expression	MELO.jh100344.1.t1
Synteny	MELO.jh100344.1.t1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCTCAAGTTTTGCATGGCATGGTCATTGGAGGGATTCCATGTGGCTTTTTGTGTATACCTTAAGAGAGAACCTTGGGCCAATTGACACTACACTGAGCAGTGTGCTGAGCTCCGTTTCAGTTTTCACACCTGTGGAGTTGGGCAGTCAAATTCATAATTTGGTTCTTAAGTTAGGTTTTGAGTTTGATGTCATTGTGGCTAGTTCGCTGGTAGACATGTATGCTAAAGTTGGATCAATTGATGATGCCATGAAAGTCTTTATAGATATGCCCTTTAGAGATTTGATATCTTGGAACACTATGATTATGGGTCTGGTTGACAATGGTAAATACTTTGAGGCCCTACACACTTTTAATAAATTGGTCATGGAAGGTGTACTGCCAGATAGGATAACACTAGCCGGAGTCTTATTAGCTTGCAGTTATGCTGGTTTTGTTGAGGAAGGGTTAGGCATCTTCTCTACAATGACATATGAACATGGAGTTGTGCCAAGCAATGAACATTATTCTTGTGTTGTGAACTTGCTGAGTCGGGCTGGTAAATTTGAAGAAGCAGTTAATATTATCAAAACAACACCGTACCAACCTACTTCTACATTTTGGACGTCACTTCTTGGTGTTTGTGCAATTCATGGAGACCTAAAAATCATTGAAAAAGTTGCAGAGTGGGTGATGAAGCTGGAACCACAATCATCCCTACCATATTCAGTGCTGGCTCAAGCATATGCGATAAGATGTCAATGGGAAAGCATGGTTCGTGTCAAGAATACTTGGGAGAATATAGCTGCACAAAAGGTGAAGGCTTGCAGCTGGATTGTGACAAAAGATTGTGCGTATGCTTTCGAGGATGACCAATTACAGCTTCTGTTGAGAAAAAATTTCATTTCAGTGTTGGAATTAATTATCTGGGAGATTGAATATGGGATTGACTATGAACAGTATCTGGAAATAATACATTAAAATTGTTTTGTGATATTGATTATGTGAACCTCAAATTTATCGAATTCTTAATACCCAAGGGCCAACATCTCAATCTTTGGGGTTGTGGACTCTCTGACAATCACACTGAACGGATGCTCCCAGACTGTTCTTAGGAACTTGTGGATGAGACATGGTAAACGTATTGTGCTTGGAATCCTTCATAGAGTGCCTCATTGGATTAAGTTTTTTCTGGATTTGAAGATACTGTTTCCTCTTTGGTGCAAATCTGATGCCCTGTTAAGAGATTAGCAGCTTTGTTTTGATGTTCAGCGACTATTCTCTTTGCATTTGTGTGGGTTTGCAATGGTGGGATACCAATTGAAAGCATTTGCAGTGACGTTTGCTGGAACTAACCTTTGTGCAATGGAAGATGAAGTTTGGAAGAAAACTGATACATACATATTCATGCTTCAAGAGACTGGAGAGACGTGAAGATGATGTAATGCTTCCTCCAACTCCTCATTGGCCTCCACCTATATCATTGTGGCCACCTGTTTAAATAATTATATTATCCATGTTTGTTTTTTGAGTTTAACTCTTACAAGCTTGCTCACCTTAACCCTTATCTTAATTTTTATCTCATTGAAAAATCATAATTTCATGTAGAATTAACGATGGAAGTTATTTCCCATTACAGTATCCAATTTTTGCTATTGGCCACTGAAGAGCAATTCATGTTTAAGAGCTCAACGTGA

mRNA sequence

ATGATCTCAAGTTTTGCATGGCATGGTCATTGGAGGGATTCCATGTGGCTTTTTGTGTATACCTTAAGAGAGAACCTTGGGCCAATTGACACTACACTGAGCAGTGTGCTGAGCTCCGTTTCAGTTTTCACACCTGTGGAGTTGGGCAGTCAAATTCATAATTTGGTTCTTAAGTTAGGTTTTGAGTTTGATGTCATTGTGGCTAGTTCGCTGGTAGACATGTATGCTAAAGTTGGATCAATTGATGATGCCATGAAAGTCTTTATAGATATGCCCTTTAGAGATTTGATATCTTGGAACACTATGATTATGGGTCTGGTTGACAATGGTAAATACTTTGAGGCCCTACACACTTTTAATAAATTGGTCATGGAAGGTGTACTGCCAGATAGGATAACACTAGCCGGAGTCTTATTAGCTTGCAGTTATGCTGGTTTTGTTGAGGAAGGGTTAGGCATCTTCTCTACAATGACATATGAACATGGAGTTGTGCCAAGCAATGAACATTATTCTTGTGTTGTGAACTTGCTGAGTCGGGCTGGTAAATTTGAAGAAGCAGTTAATATTATCAAAACAACACCGTACCAACCTACTTCTACATTTTGGACGTCACTTCTTGGTGTTTGTGCAATTCATGGAGACCTAAAAATCATTGAAAAAGTTGCAGAGTGGGTGATGAAGCTGGAACCACAATCATCCCTACCATATTCAGTGCTGGCTCAAGCATATGCGATAAGATGTCAATGGGAAAGCATGGTTCGTGTCAAGAATACTTGGGAGAATATAGCTGCACAAAAGGTGAAGGCTTGCAGCTGGATTGTGACAAAAGATTGTGCGTATGCTTTCGAGGATGACCAATTACAGCTTCTGTTGAGAAAAAATTTCATTTCAGTGTTGGAATTAATTATCTGGGAGATTGAATATGGGATTGACTATGAACAAGACTGGAGAGACGTGAAGATGATTATCCAATTTTTGCTATTGGCCACTGAAGAGCAATTCATGTTTAAGAGCTCAACGTGA

Coding sequence (CDS)

ATGATCTCAAGTTTTGCATGGCATGGTCATTGGAGGGATTCCATGTGGCTTTTTGTGTATACCTTAAGAGAGAACCTTGGGCCAATTGACACTACACTGAGCAGTGTGCTGAGCTCCGTTTCAGTTTTCACACCTGTGGAGTTGGGCAGTCAAATTCATAATTTGGTTCTTAAGTTAGGTTTTGAGTTTGATGTCATTGTGGCTAGTTCGCTGGTAGACATGTATGCTAAAGTTGGATCAATTGATGATGCCATGAAAGTCTTTATAGATATGCCCTTTAGAGATTTGATATCTTGGAACACTATGATTATGGGTCTGGTTGACAATGGTAAATACTTTGAGGCCCTACACACTTTTAATAAATTGGTCATGGAAGGTGTACTGCCAGATAGGATAACACTAGCCGGAGTCTTATTAGCTTGCAGTTATGCTGGTTTTGTTGAGGAAGGGTTAGGCATCTTCTCTACAATGACATATGAACATGGAGTTGTGCCAAGCAATGAACATTATTCTTGTGTTGTGAACTTGCTGAGTCGGGCTGGTAAATTTGAAGAAGCAGTTAATATTATCAAAACAACACCGTACCAACCTACTTCTACATTTTGGACGTCACTTCTTGGTGTTTGTGCAATTCATGGAGACCTAAAAATCATTGAAAAAGTTGCAGAGTGGGTGATGAAGCTGGAACCACAATCATCCCTACCATATTCAGTGCTGGCTCAAGCATATGCGATAAGATGTCAATGGGAAAGCATGGTTCGTGTCAAGAATACTTGGGAGAATATAGCTGCACAAAAGGTGAAGGCTTGCAGCTGGATTGTGACAAAAGATTGTGCGTATGCTTTCGAGGATGACCAATTACAGCTTCTGTTGAGAAAAAATTTCATTTCAGTGTTGGAATTAATTATCTGGGAGATTGAATATGGGATTGACTATGAACAAGACTGGAGAGACGTGAAGATGATTATCCAATTTTTGCTATTGGCCACTGAAGAGCAATTCATGTTTAAGAGCTCAACGTGA

Protein sequence

MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLAQAYAIRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRKNFISVLELIIWEIEYGIDYEQDWRDVKMIIQFLLLATEEQFMFKSST

Homology

[Close]

BLAST of MELO.jh100344.1.t1 vs. NCBI nr
Match: XP_016899445.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 637 bits (1642), Expect = 5.51e-226
Identity = 312/314 (99.36%), Postives = 314/314 (100.00%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG
Sbjct: 245 MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 304

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN
Sbjct: 305 FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 364

Query: 121 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 180
           KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA
Sbjct: 365 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 424

Query: 181 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 240
           GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA
Sbjct: 425 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 484

Query: 241 QAYAIRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRKNFISVLE 300
           QAYA+RCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLR+NFISVLE
Sbjct: 485 QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVLE 544

Query: 301 LIIWEIEYGIDYEQ 314
           LIIWEIEYGIDYEQ
Sbjct: 545 LIIWEIEYGIDYEQ 558

[Close]

BLAST of MELO.jh100344.1.t1 vs. NCBI nr
Match: XP_008441580.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X1 [Cucumis melo] >XP_008441581.1 PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X1 [Cucumis melo] >XP_016899443.1 PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X1 [Cucumis melo] >XP_016899444.1 PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 637 bits (1642), Expect = 7.26e-225
Identity = 312/314 (99.36%), Postives = 314/314 (100.00%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG
Sbjct: 319 MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 378

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN
Sbjct: 379 FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 438

Query: 121 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 180
           KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA
Sbjct: 439 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 498

Query: 181 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 240
           GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA
Sbjct: 499 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 558

Query: 241 QAYAIRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRKNFISVLE 300
           QAYA+RCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLR+NFISVLE
Sbjct: 559 QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVLE 618

Query: 301 LIIWEIEYGIDYEQ 314
           LIIWEIEYGIDYEQ
Sbjct: 619 LIIWEIEYGIDYEQ 632

[Close]

BLAST of MELO.jh100344.1.t1 vs. NCBI nr
Match: TYK23780.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 637 bits (1642), Expect = 1.80e-223
Identity = 312/314 (99.36%), Postives = 314/314 (100.00%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG
Sbjct: 319 MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 378

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN
Sbjct: 379 FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 438

Query: 121 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 180
           KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA
Sbjct: 439 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 498

Query: 181 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 240
           GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA
Sbjct: 499 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 558

Query: 241 QAYAIRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRKNFISVLE 300
           QAYA+RCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLR+NFISVLE
Sbjct: 559 QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVLE 618

Query: 301 LIIWEIEYGIDYEQ 314
           LIIWEIEYGIDYEQ
Sbjct: 619 LIIWEIEYGIDYEQ 632

[Close]

BLAST of MELO.jh100344.1.t1 vs. NCBI nr
Match: XP_011657317.1 (pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Cucumis sativus] >XP_031743516.1 pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Cucumis sativus] >XP_031743517.1 pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Cucumis sativus] >XP_031743518.1 pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Cucumis sativus] >XP_031743519.1 pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Cucumis sativus] >XP_031743520.1 pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Cucumis sativus] >KAE8647194.1 hypothetical protein Csa_019030 [Cucumis sativus])

HSP 1 Score: 600 bits (1546), Expect = 2.73e-210
Identity = 295/314 (93.95%), Postives = 302/314 (96.18%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSS+SVFTPVELGSQIHNLVLKLG
Sbjct: 319 MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSISVFTPVELGSQIHNLVLKLG 378

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           F+ DVIV SSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN
Sbjct: 379 FQSDVIVTSSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 438

Query: 121 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 180
           KLVMEGVLPDRITLAGVLLACSYAG VEEGL IFS MTYEHGVVP NEHYSCVVNLLSRA
Sbjct: 439 KLVMEGVLPDRITLAGVLLACSYAGLVEEGLVIFSKMTYEHGVVPRNEHYSCVVNLLSRA 498

Query: 181 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 240
           GKFEEAVNIIKTT YQPTSTFWTSLLGVCAIHGDLKIIEKVAEW+MKLEPQSSLPYSVLA
Sbjct: 499 GKFEEAVNIIKTTLYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWMMKLEPQSSLPYSVLA 558

Query: 241 QAYAIRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRKNFISVLE 300
           QAYA+RCQWESMVRVK TWENIA QKVKACSWIVTKD AYAF+DDQLQLL R+N ISVLE
Sbjct: 559 QAYAMRCQWESMVRVKKTWENIATQKVKACSWIVTKDYAYAFQDDQLQLLSRENIISVLE 618

Query: 301 LIIWEIEYGIDYEQ 314
           LIIWEIEYGID+EQ
Sbjct: 619 LIIWEIEYGIDHEQ 632

[Close]

BLAST of MELO.jh100344.1.t1 vs. NCBI nr
Match: XP_038884751.1 (pentatricopeptide repeat-containing protein At1g43980, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 549 bits (1415), Expect = 2.36e-195
Identity = 274/314 (87.26%), Postives = 289/314 (92.04%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MISSFAWHG WRDSMWLFVY LR+NLGPI+ TLSSVLSS+SVFTPVELGSQIHNLVLKLG
Sbjct: 1   MISSFAWHGRWRDSMWLFVYALRDNLGPIEITLSSVLSSISVFTPVELGSQIHNLVLKLG 60

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           FE D IV SSLVDMYAKVGSID AMKVF+DMP RDLISWNTMIMGLV+NGKYF+ALHTFN
Sbjct: 61  FESDAIVTSSLVDMYAKVGSIDSAMKVFVDMPVRDLISWNTMIMGLVNNGKYFDALHTFN 120

Query: 121 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 180
           KLV EGVL DRITLAGVLLACSYAGFVEEGL IFSTMTYEHG+VP NEHYSCVVNLLS A
Sbjct: 121 KLVKEGVLADRITLAGVLLACSYAGFVEEGLVIFSTMTYEHGIVPRNEHYSCVVNLLSWA 180

Query: 181 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 240
           GKFEEAVNIIKTTP QPTSTFWTSLLGVCAIHGDLK+IE+VAE VMKLEPQSSLPYSVLA
Sbjct: 181 GKFEEAVNIIKTTPCQPTSTFWTSLLGVCAIHGDLKVIERVAERVMKLEPQSSLPYSVLA 240

Query: 241 QAYAIRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRKNFISVLE 300
           QAYA+R +WES VRV+ TWENIAAQKVK CSWIVTKD AYAFEDDQLQ L R+  ISVLE
Sbjct: 241 QAYAMRGRWESTVRVRKTWENIAAQKVKGCSWIVTKDYAYAFEDDQLQHLWRE--ISVLE 300

Query: 301 LIIWEIEYGIDYEQ 314
           LIIWE+EYGI Y+Q
Sbjct: 301 LIIWEVEYGIVYDQ 312

[Close]

BLAST of MELO.jh100344.1.t1 vs. ExPASy Swiss-Prot
Match: Q9LP03 (Pentatricopeptide repeat-containing protein At1g43980, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E58 PE=3 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 5.6e-64
Identity = 125/306 (40.85%), Postives = 194/306 (63.40%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MI S++WH    D++ LF+  + +++ P   T SSVLSS++    ++ G+ +H+LV+KLG
Sbjct: 319 MIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNA-VMLDHGADVHSLVIKLG 378

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           F+ D  VA+SL++MY K GS+D AM VF     +DLI WNT+IMGL  N +  E+L  FN
Sbjct: 379 FDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFN 438

Query: 121 KLVM-EGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSR 180
           +L+M + + PDR+TL G+L+AC YAGFV EG+ IFS+M   HGV P NEHY+C++ LL R
Sbjct: 439 QLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCR 498

Query: 181 AGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVL 240
            G   EA +I    P++P+S  W  +L      GD ++ E VA+ +++ EP+SS PY VL
Sbjct: 499 VGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVL 558

Query: 241 AQAYAIRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRKNFISVL 300
            + Y +  +WE+ V+++        +  +  S I  +   ++FE DQLQ+    +  ++L
Sbjct: 559 IKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEADQLQIHGGHDTCALL 618

Query: 301 ELIIWE 306
           +L+ W+
Sbjct: 619 DLLSWD 623

[Close]

BLAST of MELO.jh100344.1.t1 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 5.6e-56
Identity = 117/320 (36.56%), Postives = 183/320 (57.19%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           +I+ +  +G   +++ LF    RE++ P   + +++L + +    + LG Q H  VLK G
Sbjct: 357 LIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHG 416

Query: 61  FEF------DVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFE 120
           F+F      D+ V +SL+DMY K G +++   VF  M  RD +SWN MI+G   NG   E
Sbjct: 417 FKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNE 476

Query: 121 ALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVV 180
           AL  F +++  G  PD IT+ GVL AC +AGFVEEG   FS+MT + GV P  +HY+C+V
Sbjct: 477 ALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMV 536

Query: 181 NLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSL 240
           +LL RAG  EEA ++I+  P QP S  W SLL  C +H ++ + + VAE ++++EP +S 
Sbjct: 537 DLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSG 596

Query: 241 PYSVLAQAYAIRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRKN 300
           PY +L+  YA   +WE ++ V+ +       K   CSWI  +   + F         +K 
Sbjct: 597 PYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQ 656

Query: 301 FISVLELIIWEIEYGIDYEQ 315
             S+L+++I E+    D+ +
Sbjct: 657 IHSLLDILIAEMRPEQDHTE 676

[Close]

BLAST of MELO.jh100344.1.t1 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 7.9e-50
Identity = 101/282 (35.82%), Postives = 170/282 (60.28%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MI+ ++  GH  +++ LFV   RE      ++ SS LS+ +    +ELG Q+H  ++K G
Sbjct: 380 MIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGG 439

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           +E    V ++L+ MY K GSI++A  +F +M  +D++SWNTMI G   +G    AL  F 
Sbjct: 440 YETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFE 499

Query: 121 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 180
            +  EG+ PD  T+  VL ACS+ G V++G   F TMT ++GV+P+++HY+C+V+LL RA
Sbjct: 500 SMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRA 559

Query: 181 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 240
           G  E+A N++K  P++P +  W +LLG   +HG+ ++ E  A+ +  +EP++S  Y +L+
Sbjct: 560 GLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLS 619

Query: 241 QAYAIRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAF 283
             YA   +W  + +++    +   +KV   SWI  ++  + F
Sbjct: 620 NLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTF 661

[Close]

BLAST of MELO.jh100344.1.t1 vs. ExPASy Swiss-Prot
Match: Q9FK93 (Pentatricopeptide repeat-containing protein At5g39680 OS=Arabidopsis thaliana OX=3702 GN=EMB2744 PE=1 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.0e-49
Identity = 101/278 (36.33%), Postives = 170/278 (61.15%), Query Frame = 0


Query: 11  WRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLGFEFDVIVASS 70
           + +++ LF     + + P + T + +L+S++  + ++ G  +H LVLK G+   V+V ++
Sbjct: 319 FEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNA 378

Query: 71  LVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFNKLVMEGVLPD 130
           LV+MYAK GSI+DA K F  M FRD+++WNTMI G   +G   EAL  F++++  G +P+
Sbjct: 379 LVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPN 438

Query: 131 RITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRAGKFEEAVNII 190
           RIT  GVL ACS+ GFVE+GL  F+ +  +  V P  +HY+C+V LLS+AG F++A + +
Sbjct: 439 RITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFM 498

Query: 191 KTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLAQAYAIRCQWE 250
           +T P +     W +LL  C +  + ++ +KVAE+ ++  P  S  Y +L+  +A   +WE
Sbjct: 499 RTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWE 558

Query: 251 SMVRVKNTWENIAAQKVKACSWIVTKDCAYAF--EDDQ 287
            + +V++   N   +K    SWI  ++  + F  ED+Q
Sbjct: 559 GVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQ 596

[Close]

BLAST of MELO.jh100344.1.t1 vs. ExPASy Swiss-Prot
Match: O23169 (Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H5 PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.3e-49
Identity = 109/352 (30.97%), Postives = 192/352 (54.55%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MI  +     WR+   LF   +     P + T + VL++ +  T  ELG Q+H  + ++G
Sbjct: 290 MIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVG 349

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           F+     +SSLVDMY K G+I+ A  V    P  DL+SW ++I G   NG+  EAL  F+
Sbjct: 350 FDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFD 409

Query: 121 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 180
            L+  G  PD +T   VL AC++AG VE+GL  F ++T +H +  +++HY+C+V+LL+R+
Sbjct: 410 LLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARS 469

Query: 181 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 240
           G+FE+  ++I   P +P+   W S+LG C+ +G++ + E+ A+ + K+EP++ + Y  +A
Sbjct: 470 GRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMA 529

Query: 241 QAYAIRCQWESMVRVKNTWENIAAQKVKACSW---------IVTKDCAYAFEDDQLQLL- 300
             YA   +WE   +++   + I   K    SW          +  D ++   +  ++ L 
Sbjct: 530 NIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLR 589

Query: 301 -LRK-----NFISVLELIIWEIEYGIDYEQD----WRDVKMIIQFLLLATEE 333
            LRK      ++    L++ ++E   D +++    +   K+ + F +L+TEE
Sbjct: 590 ELRKKMKEEGYVPATSLVLHDVE---DEQKEENLVYHSEKLAVAFAILSTEE 638

[Close]

BLAST of MELO.jh100344.1.t1 vs. ExPASy TrEMBL
Match: A0A1S4DUP9 (pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485665 PE=4 SV=1)

HSP 1 Score: 637 bits (1642), Expect = 2.67e-226
Identity = 312/314 (99.36%), Postives = 314/314 (100.00%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG
Sbjct: 245 MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 304

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN
Sbjct: 305 FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 364

Query: 121 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 180
           KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA
Sbjct: 365 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 424

Query: 181 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 240
           GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA
Sbjct: 425 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 484

Query: 241 QAYAIRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRKNFISVLE 300
           QAYA+RCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLR+NFISVLE
Sbjct: 485 QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVLE 544

Query: 301 LIIWEIEYGIDYEQ 314
           LIIWEIEYGIDYEQ
Sbjct: 545 LIIWEIEYGIDYEQ 558

[Close]

BLAST of MELO.jh100344.1.t1 vs. ExPASy TrEMBL
Match: A0A1S3B3Q8 (pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485665 PE=4 SV=1)

HSP 1 Score: 637 bits (1642), Expect = 3.51e-225
Identity = 312/314 (99.36%), Postives = 314/314 (100.00%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG
Sbjct: 319 MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 378

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN
Sbjct: 379 FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 438

Query: 121 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 180
           KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA
Sbjct: 439 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 498

Query: 181 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 240
           GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA
Sbjct: 499 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 558

Query: 241 QAYAIRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRKNFISVLE 300
           QAYA+RCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLR+NFISVLE
Sbjct: 559 QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVLE 618

Query: 301 LIIWEIEYGIDYEQ 314
           LIIWEIEYGIDYEQ
Sbjct: 619 LIIWEIEYGIDYEQ 632

[Close]

BLAST of MELO.jh100344.1.t1 vs. ExPASy TrEMBL
Match: A0A5D3DK49 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G001070 PE=4 SV=1)

HSP 1 Score: 637 bits (1642), Expect = 8.73e-224
Identity = 312/314 (99.36%), Postives = 314/314 (100.00%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG
Sbjct: 319 MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 378

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN
Sbjct: 379 FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 438

Query: 121 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 180
           KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA
Sbjct: 439 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 498

Query: 181 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 240
           GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA
Sbjct: 499 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 558

Query: 241 QAYAIRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRKNFISVLE 300
           QAYA+RCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLR+NFISVLE
Sbjct: 559 QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVLE 618

Query: 301 LIIWEIEYGIDYEQ 314
           LIIWEIEYGIDYEQ
Sbjct: 619 LIIWEIEYGIDYEQ 632

[Close]

BLAST of MELO.jh100344.1.t1 vs. ExPASy TrEMBL
Match: A0A0A0KIE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G344300 PE=4 SV=1)

HSP 1 Score: 600 bits (1546), Expect = 1.57e-215
Identity = 295/314 (93.95%), Postives = 302/314 (96.18%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSS+SVFTPVELGSQIHNLVLKLG
Sbjct: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSISVFTPVELGSQIHNLVLKLG 60

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           F+ DVIV SSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN
Sbjct: 61  FQSDVIVTSSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120

Query: 121 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 180
           KLVMEGVLPDRITLAGVLLACSYAG VEEGL IFS MTYEHGVVP NEHYSCVVNLLSRA
Sbjct: 121 KLVMEGVLPDRITLAGVLLACSYAGLVEEGLVIFSKMTYEHGVVPRNEHYSCVVNLLSRA 180

Query: 181 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 240
           GKFEEAVNIIKTT YQPTSTFWTSLLGVCAIHGDLKIIEKVAEW+MKLEPQSSLPYSVLA
Sbjct: 181 GKFEEAVNIIKTTLYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWMMKLEPQSSLPYSVLA 240

Query: 241 QAYAIRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRKNFISVLE 300
           QAYA+RCQWESMVRVK TWENIA QKVKACSWIVTKD AYAF+DDQLQLL R+N ISVLE
Sbjct: 241 QAYAMRCQWESMVRVKKTWENIATQKVKACSWIVTKDYAYAFQDDQLQLLSRENIISVLE 300

Query: 301 LIIWEIEYGIDYEQ 314
           LIIWEIEYGID+EQ
Sbjct: 301 LIIWEIEYGIDHEQ 314

[Close]

BLAST of MELO.jh100344.1.t1 vs. ExPASy TrEMBL
Match: A0A6J1GNQ4 (pentatricopeptide repeat-containing protein At1g43980, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111456079 PE=4 SV=1)

HSP 1 Score: 486 bits (1250), Expect = 8.41e-166
Identity = 240/314 (76.43%), Postives = 269/314 (85.67%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MISS AWHGHWRDSMWLFVY LRENL P   TLSSVLSS+SVFTP++LGSQIHNLVLKLG
Sbjct: 319 MISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISVFTPLDLGSQIHNLVLKLG 378

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           FE D +V SSLV+MYAKVG ID+AMKVF DMP RDLISWNTMIMGLV+NGKYFEAL T  
Sbjct: 379 FESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNTMIMGLVNNGKYFEALGTLE 438

Query: 121 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 180
            LV EGV+ DRITLAGVLLACS+AGFV+EGL IFSTM  +HGVVP+NEHY+CVV+LLSRA
Sbjct: 439 NLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKHGVVPTNEHYTCVVDLLSRA 498

Query: 181 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 240
           GKF+EAVNII+TT  QPTSTFW SLL  CAIHGD+  IE+VAE VMKLEPQSSLPYSVLA
Sbjct: 499 GKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERVAERVMKLEPQSSLPYSVLA 558

Query: 241 QAYAIRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRKNFISVLE 300
           + YA R +WES VRV    ENIAAQKVKACSW+V KD  YAF+DD+LQ L  ++FIS LE
Sbjct: 559 RVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVYAFQDDRLQHLGGESFISALE 618

Query: 301 LIIWEIEYGIDYEQ 314
           LI+WE+EYG ++EQ
Sbjct: 619 LIVWEVEYGNEHEQ 632

[Close]

BLAST of MELO.jh100344.1.t1 vs. TAIR 10
Match: AT1G43980.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 246.1 bits (627), Expect = 4.0e-65
Identity = 125/306 (40.85%), Postives = 194/306 (63.40%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MI S++WH    D++ LF+  + +++ P   T SSVLSS++    ++ G+ +H+LV+KLG
Sbjct: 307 MIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNA-VMLDHGADVHSLVIKLG 366

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           F+ D  VA+SL++MY K GS+D AM VF     +DLI WNT+IMGL  N +  E+L  FN
Sbjct: 367 FDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFN 426

Query: 121 KLVM-EGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSR 180
           +L+M + + PDR+TL G+L+AC YAGFV EG+ IFS+M   HGV P NEHY+C++ LL R
Sbjct: 427 QLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCR 486

Query: 181 AGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVL 240
            G   EA +I    P++P+S  W  +L      GD ++ E VA+ +++ EP+SS PY VL
Sbjct: 487 VGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVL 546

Query: 241 AQAYAIRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRKNFISVL 300
            + Y +  +WE+ V+++        +  +  S I  +   ++FE DQLQ+    +  ++L
Sbjct: 547 IKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEADQLQIHGGHDTCALL 606

Query: 301 ELIIWE 306
           +L+ W+
Sbjct: 607 DLLSWD 611

[Close]

BLAST of MELO.jh100344.1.t1 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 219.5 bits (558), Expect = 4.0e-57
Identity = 117/320 (36.56%), Postives = 183/320 (57.19%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           +I+ +  +G   +++ LF    RE++ P   + +++L + +    + LG Q H  VLK G
Sbjct: 357 LIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHG 416

Query: 61  FEF------DVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFE 120
           F+F      D+ V +SL+DMY K G +++   VF  M  RD +SWN MI+G   NG   E
Sbjct: 417 FKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNE 476

Query: 121 ALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVV 180
           AL  F +++  G  PD IT+ GVL AC +AGFVEEG   FS+MT + GV P  +HY+C+V
Sbjct: 477 ALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMV 536

Query: 181 NLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSL 240
           +LL RAG  EEA ++I+  P QP S  W SLL  C +H ++ + + VAE ++++EP +S 
Sbjct: 537 DLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSG 596

Query: 241 PYSVLAQAYAIRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRKN 300
           PY +L+  YA   +WE ++ V+ +       K   CSWI  +   + F         +K 
Sbjct: 597 PYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQ 656

Query: 301 FISVLELIIWEIEYGIDYEQ 315
             S+L+++I E+    D+ +
Sbjct: 657 IHSLLDILIAEMRPEQDHTE 676

[Close]

BLAST of MELO.jh100344.1.t1 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 199.1 bits (505), Expect = 5.6e-51
Identity = 101/282 (35.82%), Postives = 170/282 (60.28%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MI+ ++  GH  +++ LFV   RE      ++ SS LS+ +    +ELG Q+H  ++K G
Sbjct: 380 MIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGG 439

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           +E    V ++L+ MY K GSI++A  +F +M  +D++SWNTMI G   +G    AL  F 
Sbjct: 440 YETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFE 499

Query: 121 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 180
            +  EG+ PD  T+  VL ACS+ G V++G   F TMT ++GV+P+++HY+C+V+LL RA
Sbjct: 500 SMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRA 559

Query: 181 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 240
           G  E+A N++K  P++P +  W +LLG   +HG+ ++ E  A+ +  +EP++S  Y +L+
Sbjct: 560 GLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLS 619

Query: 241 QAYAIRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAF 283
             YA   +W  + +++    +   +KV   SWI  ++  + F
Sbjct: 620 NLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTF 661

[Close]

BLAST of MELO.jh100344.1.t1 vs. TAIR 10
Match: AT5G39680.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 198.7 bits (504), Expect = 7.3e-51
Identity = 101/278 (36.33%), Postives = 170/278 (61.15%), Query Frame = 0


Query: 11  WRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLGFEFDVIVASS 70
           + +++ LF     + + P + T + +L+S++  + ++ G  +H LVLK G+   V+V ++
Sbjct: 319 FEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNA 378

Query: 71  LVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFNKLVMEGVLPD 130
           LV+MYAK GSI+DA K F  M FRD+++WNTMI G   +G   EAL  F++++  G +P+
Sbjct: 379 LVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPN 438

Query: 131 RITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRAGKFEEAVNII 190
           RIT  GVL ACS+ GFVE+GL  F+ +  +  V P  +HY+C+V LLS+AG F++A + +
Sbjct: 439 RITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFM 498

Query: 191 KTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLAQAYAIRCQWE 250
           +T P +     W +LL  C +  + ++ +KVAE+ ++  P  S  Y +L+  +A   +WE
Sbjct: 499 RTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWE 558

Query: 251 SMVRVKNTWENIAAQKVKACSWIVTKDCAYAF--EDDQ 287
            + +V++   N   +K    SWI  ++  + F  ED+Q
Sbjct: 559 GVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQ 596

[Close]

BLAST of MELO.jh100344.1.t1 vs. TAIR 10
Match: AT4G37170.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 198.4 bits (503), Expect = 9.5e-51
Identity = 109/352 (30.97%), Postives = 192/352 (54.55%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MI  +     WR+   LF   +     P + T + VL++ +  T  ELG Q+H  + ++G
Sbjct: 290 MIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVG 349

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           F+     +SSLVDMY K G+I+ A  V    P  DL+SW ++I G   NG+  EAL  F+
Sbjct: 350 FDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFD 409

Query: 121 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 180
            L+  G  PD +T   VL AC++AG VE+GL  F ++T +H +  +++HY+C+V+LL+R+
Sbjct: 410 LLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARS 469

Query: 181 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 240
           G+FE+  ++I   P +P+   W S+LG C+ +G++ + E+ A+ + K+EP++ + Y  +A
Sbjct: 470 GRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMA 529

Query: 241 QAYAIRCQWESMVRVKNTWENIAAQKVKACSW---------IVTKDCAYAFEDDQLQLL- 300
             YA   +WE   +++   + I   K    SW          +  D ++   +  ++ L 
Sbjct: 530 NIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLR 589

Query: 301 -LRK-----NFISVLELIIWEIEYGIDYEQD----WRDVKMIIQFLLLATEE 333
            LRK      ++    L++ ++E   D +++    +   K+ + F +L+TEE
Sbjct: 590 ELRKKMKEEGYVPATSLVLHDVE---DEQKEENLVYHSEKLAVAFAILSTEE 638

The following BLAST results are available for this feature:

BLAST of MELO.jh100344.1.t1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016899445.1	5.51e-226	99.36	PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial ...	[more]
XP_008441580.1	7.26e-225	99.36	PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial ...	[more]
TYK23780.1	1.80e-223	99.36	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_011657317.1	2.73e-210	93.95	pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Cucumis sa...	[more]
XP_038884751.1	2.36e-195	87.26	pentatricopeptide repeat-containing protein At1g43980, mitochondrial-like [Benin...	[more]

BLAST of MELO.jh100344.1.t1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LP03	5.6e-64	40.85	Pentatricopeptide repeat-containing protein At1g43980, mitochondrial OS=Arabidop...	[more]
Q9SIT7	5.6e-56	36.56	Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX...	[more]
Q9SY02	7.9e-50	35.82	Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX...	[more]
Q9FK93	1.0e-49	36.33	Pentatricopeptide repeat-containing protein At5g39680 OS=Arabidopsis thaliana OX...	[more]
O23169	1.3e-49	30.97	Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana OX...	[more]

BLAST of MELO.jh100344.1.t1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DUP9	2.67e-226	99.36	pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X2 ...	[more]
A0A1S3B3Q8	3.51e-225	99.36	pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X1 ...	[more]
A0A5D3DK49	8.73e-224	99.36	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0KIE7	1.57e-215	93.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G344300 PE=4 SV=1	[more]
A0A6J1GNQ4	8.41e-166	76.43	pentatricopeptide repeat-containing protein At1g43980, mitochondrial OS=Cucurbit...	[more]

BLAST of MELO.jh100344.1.t1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43980.1	4.0e-65	40.85	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G13600.1	4.0e-57	36.56	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G02750.1	5.6e-51	35.82	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G39680.1	7.3e-51	36.33	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G37170.1	9.5e-51	30.97	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 45..140 e-value: 1.6E-18 score: 68.7 coord: 141..269 e-value: 8.7E-12 score: 46.7
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 169..191 e-value: 0.11 score: 12.8 coord: 69..92 e-value: 0.0052 score: 16.9 coord: 97..127 e-value: 1.2E-5 score: 25.2
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 97..130 e-value: 7.8E-6 score: 23.7
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 95..129 score: 10.709248
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 1..310
None	No IPR available	PANTHER	PTHR24015:SF1740	OS03G0435200 PROTEIN	coord: 1..310

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO.jh100344.1	MELO.jh100344.1	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO.jh100344.1.t1.exon3	MELO.jh100344.1.t1.exon3	exon
MELO.jh100344.1.t1.exon2	MELO.jh100344.1.t1.exon2	exon
MELO.jh100344.1.t1.exon1	MELO.jh100344.1.t1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.MELO.jh100344.1.t1	cds.MELO.jh100344.1.t1_3	CDS
cds.MELO.jh100344.1.t1	cds.MELO.jh100344.1.t1_2	CDS
cds.MELO.jh100344.1.t1	cds.MELO.jh100344.1.t1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO.jh100344.1.t1	MELO.jh100344.1.t1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding