MELO.jh031758.1.t1 (mRNA) Melon (Harukei-3) v1.41

Overview
NameMELO.jh031758.1.t1
TypemRNA
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr09: 2157081 .. 2162296 (+)
Sequence length285
RNA-Seq ExpressionMELO.jh031758.1.t1
SyntenyMELO.jh031758.1.t1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGGAAAGAAAGAAAAGAGAAGGGTACTAAATCTCTTACACGATTTTTTCTTCTGCACAAAACATTTATTCCCAAATCCTTTTGCACTATTTTCTCTCGTCCAAGGAAGAAAAGGTACAACATTTCGTTCTTCTTTTTTATCTCTCTGCTTCTCTTGCCCTTTTCCTTCTTCTTCTTCCTCCTCTCTTAGATTCATCAATATTTCCAACCCCTTCTTCTCCCCAAGCCCTAGTTTCGCACATTTTGTTTCTTCCAGACGCGCCATCTCTGTTTGTCGTCTTCAGTCGTCTCGTGCTTCTCCTCGCTCCCTCCTCCATCTGGTATGTTCTTCGTTCATTCCTATAGTACTCCTCTTTGTTGCTTCATTCTTCGATTCATTCTTTGCTCTCTGACTTCCTTTTTACTTAATCGCCATTAATTGCCTTCATTTAGTTTTTCTTGATGGATTCGAACGTGTTTGACGTGGGTCTTCATGTTTAGTTTTTGTTGTTTGTTCTTCTGCCTACAAACTATTTGAGAAAATGACTGATAAAGTAATTTCTAGATTATGATTCCTTGAGTATGAAATTTTCTTCCTTGTTGACTAATAAACTTCGAGTATGATTGCACAAGTTCTATGCTCATTTTACTTTTTAAGTTCTACTCTAATTTTGGTCTTCTAGCTCTTGGATGCACATTTGATGTATATGAGTCGTTAGATTTTGAATGTTTGAGGGAAAAAGTTTGAAGGAAGCCGTTAGAAAATTGGTGGCACAAAAATTTCCAAGCTTGGGAAGGTAATTTCATCCTTGTTAAGTCATCTTCAAGATGGTTAATATAAGTTTCTTCATTTTTTTTCTCAATAACTTTTATTGGGTCCTTACTTGTTGTGCAGTGTATAGATTTCTTTTAGAAAAAAGTTTTTTTTTTTTTGATTGTTTTTCTATGGAAAGTTTTGTAAACAAGCAATTATATTGTCTTATTTTCAAGTGAAATCTGCATTGAAGTTTTTTTGTGGAAAGTTTTGTAAACGAGCAATCTTAGTACATGTGTTAATTTGCATTGTTATGGAAACTGAATTTTCTAATTGGTTGTGATATTAGTTATAACAATAGCGCACATTGATTTTATTGTGGATTTAATGGTGGTAGGTAGTAGCATAGCATGTGGTTAAAATTAAGACTATTGTATCATCATCATGAATGCCTAAATTTGTTCTCTAATTGTGATTGAAAAACTACTAGAACTAATTTCAAATCTAATACATTTAGATGCGGAAAACAGTCCTTTTAGTGCAATTGATTTTAATGTTTAATAATGAGAAACAAGGATCGTTAATCTTCTTCTTTGTTCTTATAGTTGAAATCTATATGTAGACTTCTTTTGTTTGTTAATTTATATTATTGTTTTGTAAATTCTGGTAGCAGCGAATCAAAATTACCATTTTGTGTATATTGCTCATGACGTGTTGCTTAAGAAAGAGTATGGTAGCAAGGTAAATGTTATAATATAATTATATATATATGCATGTGTATCAATATGCCCATTCTATCTTGTGATGTGTTTTAAGGCTGAGATTATTTCTCTTTTTTGGGTCTACCGACGATGCATTTCAGATTGCAAATGTGTGGTCGTGTGGAGTGACCTTATATGTTCTTTGGTTTGTTATTCATTTGTTATAATTAATAGCAAAGTTAGATATTGTTATTGGTTGCATATGTTTCCTCTGTGCTCCTAAAAAATGGTTGACTTATTCTTCATGTTGACAACAAGATATTGCTTTGCAATAGGCGCTAACTCAACAATGCCTTTGTCCATTCCCTAAAGGTATTTTAACTATTTTCTGATTCTTTAAAGGTATATTGATGGTTTTGTGAAAAATATTGATGGCTTTATGAAATATATTGTTGGCTATGTGATAAAATATTTTGGTACCTTACAATGTGTTTGATGAAATGTCTCAATGAAGCCTTTGGTTGATTTTTAATTGATTTTTGTTTGTTTGAATTAGGAAATCAAGGCCAAGACAGATTTCATGGCTATGGGAGGAAGCTTTGAGAAAAAGAGAATGAAAAATGAATGGTTAGATTTTAAACTTTGATAATGTGTAGGGCCTTTAAGCATTCTCTAGAATTTAGTTGTTACAGTCATACATGTTTAGTGTTAGGTTTTATTTCTAGTAGTGCAGAAATTCCAATCTCCTCTCTTATTGAAAAGAATATATAGTCTTAGGATGTATTTAGGATTATTTCTCAAGTAATGACTTTTTGGAATGAATGAAAAATTATTTGGATACTTGGTTTTATATTCTGCTATGGTTTCTTACATAGCACTTTAAGGATGGCCTTCATCACACGTTCGCTTTCTTGAACATATCCTTTTGATGCTTCGACAAGGTAACTTGTCTAGAACCCTTCTTTCTCATCTTTTTGCTTGTTCTCTAAAATTAGGGCCATCCAAAATTTCTCTCCATTTTTCTTCTATTTTGTTTCTCTCTTTTTCCCTCAATTTCTTCTCATTTCCTTGCTCACACGTGTTTATACTATACATGTATTTTTCTGATAGTTTTGATGTTCTCCTTTTTCTTAGTGAATGCCTTTAATTGAAAACCATATCCCCTTGGAAAAGTTCTATTTTATGGGTGAGCAATTTCTTGTATGTTAACAAAAGTTCTCATCAGATATTTGTTTTTGTAACATATTACTTGTATAAAATCTTCCATTTCAAGAACATTTACAGCCATAAACTTTTGTTTCTTTTTTTATCTTTTAGCTCCACATACTTTAGTACTCCAAGTAGTAATTTTTAATTTATGCTCCAGGTTGAACTCAACCAAGTGATAAGTATATTTATAATTTATTTTGTAGGTTGAACTCAACCAAACGTGACATTTGTTTGCATATATATCGTGCCTGAGACAGAAGATTATTGATATGAGGCTGATGTTATACCCAAGAAGATCATATTAGAAAATCTTACAGTAAGCCTGCTCATCAAAACATTGAAAAGAAATGCACATAATAACATTTTCATCTCAAGTAATTGAATGATTTTCATGAGTATTTATTACGGTGTTTGCTAATGGTTTGCTTCTCATTCCAAGAGCCCCTTGTAGTTTCCAAGGTTGAGAGTTGCTTTATTTTTTTTTAGTAACATTAATTGTTATGTAAGTGACGTCTGTTAGTTTGCCAATTTTATTTTGAATTCTTGAATTATTTACTTATTTTCTAGGAGATAAGGAGTGCAAAGATTGAAAGGAAGAAAAAATTGTACTAGATGAACACGTTTTGGTGAACTCGTGATTCAGAGTCTTCTATTGATATTTTGTACATACTTTTGAGATAGGTTTTTGTTGATGATTGTGAACTTTGCTTTGTTAGGTTATTTTTGGTTTAATGAGTCCTTTGAACTAAGTAGTAAATTATAGAACTACCAACTTTATTATCTTTGCTAATATCCATGGACAATATTTTATTCTTTATTCAATAGCTTTCTATTTTATAGTGTTGTCTTTAGAAGTCCAATTTGAGTTAACATACTGCTTTCATACATTCAAATTCCAAATTTCTCATTGCATAGACCTTGTAAATATTTTTGGAGAGTTTCTTCCAAAAGTTACTACTTGTAAAGTATAGCGAGTAATTCTTCCTCATACTTCATTATATGTATCAAAGTGTGTTGGGCATAAAACTTTTTAGTGCACATCAATGAGCTTTTAAATCCTTTGCAAATGTACGTACCTTTCGTTGTGTTATAGTTTTATTGCCTCATAATGTAATTTAGTTTTATTGCCTCATAATGTAAATTATTTGAATACTCAAGTAATGAATTTTAGAATGAATGGAAATTATTTGGATACTTAGTTCTATATTCTGCTATGGTTTCTTACATAGCACTTTAAGGTGCTTACATGTTTTTTTAAAACATGAATGATGGTCTTCGATTCAAATCTTAGTGTGGATTCTGTTGCTTGTAAACTATATTGCACTTGGGAGCTATTTTTATGACATAGATCTTTGAGGTTTGTAGAAATGATAGACTACTGTGTGAAAATTCATAGACTAATGATGAACAAAAACTGATGTAAATCTTTATTCTCTACCACATTTTGCCATTAACTTCATGAATTTATCAAGGTGATGCAGACAGTTAGTTGTTAATTGCTATGCTATAATGTATTATTGGGATGGGTAAGAATGGATGAGATGAACATTGAGATAGGGGTTGAAACATCTTATAGTTTCTAAGTGTTTGCTTCTTTTCTTGGAGAATACTTTGTTGTTCTTACTATAACATTTGTAGAACTATTTGCCAGGTAGGTGCTTCTTGCATACCTGAGAAGCAAGGCACAAATAGACACAACATAGACAACAAAAATATTTTTTTCAAGTGTCATAATGTCCAGATGTTGTAGAATGAGGTTATGGCTAAATTAAGATGGCTAAAATATAGTTGCCATGTTCAATATCAATGAGGTAAGGTTATCTTAGAACTTAGTAAAATGCAGTTTTTGAAGTTCATCAAATTATATACTTGCATATGTTGTTGATTAAAATCTGCATTGATTTAGTATCTGTAACTTGAATACACTTCTTGCTAAGATGAGACACTCTGTTTTACTTGCTAAAAGTTGTTCTCGGCCTTCTACTTCAAATCCCAGCACTTCAGAATTCATTTTCATTCAAAAGGTTGTTTTTCTCTCTTTTTGTACTTTGTGCTAGTGCATCATTTGATCAATTTTTTTGCTTTTAGCCATTGATATGCTTGTAGGTGTTTTGGCTTTGAGTTTTGTTATTCGCTGTTGGTTTTGGCATTTTTGTGAAGTTCTGTAATGAATTTAGCTAAGTTTGTGGGCTGAATTTGGTGTTTGCGATTATGTTTTTCTTCTTTTTCATATGGATGAATTTTGTACATTGTGTACTTCAACAGTAGCATAATTTTGTGACTCGTATATGTAAGGCTTTCCATTTGAATACCTTGTACATTTCCAATACCAAGCTTAGAAGTTATAGAAAAGAATAATCCACTGCCAAACTTAAAAGTTATTATTCTTGAAGTGTGTATGTGCTTTGTGTTGTTAAAATGTGTTGTTGAAGTGAATATGATGTGTTTATGTGGGTGAATGTGTGGTCTTGTTGAATCATTTTTTTTCCTTTTCTTTTCTTACTAGGTTTTTCCACAATCCATTGGAGCAATTAATGAAACCATATTTACGCCAATTCATGATATATAG

mRNA sequence

ATGAAAGGAAAGAAAGAAAAGAGAAGGGTACTAAATCTCTTACACGATTTTTTCTTCTGCACAAAACATTTATTCCCAAATCCTTTTGCACTATTTTCTCTCGTCCAAGGAAGAAAAGACGCGCCATCTCTGTTTGTCGTCTTCAGTCGTCTCGTGCTTCTCCTCGCTCCCTCCTCCATCTGGTATGTTCTTCGTTCATTCCTATATAACATTAATTGTTATGTTTTTCCACAATCCATTGGAGCAATTAATGAAACCATATTTACGCCAATTCATGATATATAG

Coding sequence (CDS)

ATGAAAGGAAAGAAAGAAAAGAGAAGGGTACTAAATCTCTTACACGATTTTTTCTTCTGCACAAAACATTTATTCCCAAATCCTTTTGCACTATTTTCTCTCGTCCAAGGAAGAAAAGACGCGCCATCTCTGTTTGTCGTCTTCAGTCGTCTCGTGCTTCTCCTCGCTCCCTCCTCCATCTGGTATGTTCTTCGTTCATTCCTATATAACATTAATTGTTATGTTTTTCCACAATCCATTGGAGCAATTAATGAAACCATATTTACGCCAATTCATGATATATAG

Protein sequence

MKGKKEKRRVLNLLHDFFFCTKHLFPNPFALFSLVQGRKDAPSLFVVFSRLVLLLAPSSIWYVLRSFLYNINCYVFPQSIGAINETIFTPIHDI
Homology
[Close]
BLAST of MELO.jh031758.1.t1 vs. NCBI nr
Match: XP_016902535.1 (PREDICTED: uncharacterized protein LOC103499160 [Cucumis melo])

HSP 1 Score: 61.6 bits (148), Expect = 5.72e-09
Identity = 28/35 (80.00%), Postives = 29/35 (82.86%), Query Frame = 0 

Query: 4  KKEKRRVLNLLHDFFFCTKHLFPNPFALFSLVQGR 38
          KKEKR+V NLLHDFF CTKHL PNP  LFSL QGR
Sbjct: 30 KKEKRKVPNLLHDFFLCTKHLSPNPSTLFSLAQGR 64

[Close]
BLAST of MELO.jh031758.1.t1 vs. NCBI nr
Match: XP_008447319.1 (PREDICTED: uncharacterized protein LOC103489789 [Cucumis melo])

HSP 1 Score: 51.6 bits (122), Expect = 4.70e-05
Identity = 24/32 (75.00%), Postives = 24/32 (75.00%), Query Frame = 0 

Query: 7   KRRVLNLLHDFFFCTKHLFPNPFALFSLVQGR 38
           K R    LHDFFF TKHL PNPFALFSL QGR
Sbjct: 91  KERKEKALHDFFFYTKHLSPNPFALFSLAQGR 122

[Close]
BLAST of MELO.jh031758.1.t1 vs. ExPASy TrEMBL
Match: A0A1S4E3H9 (uncharacterized protein LOC103499160 OS=Cucumis melo OX=3656 GN=LOC103499160 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.77e-09
Identity = 28/35 (80.00%), Postives = 29/35 (82.86%), Query Frame = 0 

Query: 4  KKEKRRVLNLLHDFFFCTKHLFPNPFALFSLVQGR 38
          KKEKR+V NLLHDFF CTKHL PNP  LFSL QGR
Sbjct: 30 KKEKRKVPNLLHDFFLCTKHLSPNPSTLFSLAQGR 64

[Close]
BLAST of MELO.jh031758.1.t1 vs. ExPASy TrEMBL
Match: A0A1S3BH46 (uncharacterized protein LOC103489789 OS=Cucumis melo OX=3656 GN=LOC103489789 PE=4 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.28e-05
Identity = 24/32 (75.00%), Postives = 24/32 (75.00%), Query Frame = 0 

Query: 7   KRRVLNLLHDFFFCTKHLFPNPFALFSLVQGR 38
           K R    LHDFFF TKHL PNPFALFSL QGR
Sbjct: 91  KERKEKALHDFFFYTKHLSPNPFALFSLAQGR 122

The following BLAST results are available for this feature:
BLAST of MELO.jh031758.1.t1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016902535.15.72e-0980.00PREDICTED: uncharacterized protein LOC103499160 [Cucumis melo][more]
XP_008447319.14.70e-0575.00PREDICTED: uncharacterized protein LOC103489789 [Cucumis melo][more]
BLAST of MELO.jh031758.1.t1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh031758.1.t1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S4E3H92.77e-0980.00uncharacterized protein LOC103499160 OS=Cucumis melo OX=3656 GN=LOC103499160 PE=... [more]
A0A1S3BH462.28e-0575.00uncharacterized protein LOC103489789 OS=Cucumis melo OX=3656 GN=LOC103489789 PE=... [more]
BLAST of MELO.jh031758.1.t1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO.jh031758.1MELO.jh031758.1gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO.jh031758.1.t1.exonMELO.jh031758.1.t1.exonexon
MELO.jh031758.1.t1.exonMELO.jh031758.1.t1.exon_2exon
MELO.jh031758.1.t1.exonMELO.jh031758.1.t1.exon_3exon
MELO.jh031758.1.t1.exonMELO.jh031758.1.t1.exon_4exon


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO.jh031758.1.t1.start_codonMELO.jh031758.1.t1.start_codonstart_codon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO.jh031758.1.t1.cdsMELO.jh031758.1.t1.cdsCDS
MELO.jh031758.1.t1.cdsMELO.jh031758.1.t1.cds_2CDS
MELO.jh031758.1.t1.cdsMELO.jh031758.1.t1.cds_3CDS
MELO.jh031758.1.t1.cdsMELO.jh031758.1.t1.cds_4CDS


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO.jh031758.1.t1.stop_codonMELO.jh031758.1.t1.stop_codonstop_codon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO.jh031758.1.t1MELO.jh031758.1.t1-proteinpolypeptide