MC11g_new0469.1 (mRNA) Bitter gourd (Dali-11) v1

Overview
NameMC11g_new0469.1
TypemRNA
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC11: 18613115 .. 18617118 (+)
Sequence length543
RNA-Seq ExpressionMC11g_new0469.1
SyntenyMC11g_new0469.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAACAGGGCGAAGATGTCATTCAACCATCGTATGGGGCGAAGGCGTTTGCTATAATTGCCAAGGAGAAGGTATAATTCAATAAAATTTTTATTTCATATACTTATATTACTAATGATCGATTATCAACAAGTATGTGTTATCAAGTGCAGAGCGAGGAAGATGAAGGTGATAACTTCAGTGAAATCGATCTGTTCAAAGAGACGAGATACTCCGAATCTAAAGGTTGGGTTGAAGGCGCGGAGACAGCTTATGTAAGTTTACTACTTTTATAACAATTAACTTCAAATTACGCTTAAATTTTTATGTGTAAACACTTTGATGTTTTTTAAATATGTATATGTAGCTAGATATGATGCGCGTTAGAGAAGAATCTATGCAGACGGCGACAAATCCATGCCAGACCCAGAAGTACTGGAATCAGTTCTCGGGTATCGATCAAGATACATTAAAAATGTTGGTTGGGGTCTGAAACCTAAATCTCGTAGAGGTTCTGCTTCAAGTGTACATTCTTCACAACGGGAACAAGAGCTGTCTCAAGAAATAAGTACACTAAAAGAAGAATTTGAGAACCGTCTCACACGAAAGAACAACGAGTTTGAGGAGCGCCTTACACACAAAGACAAAGAATTTGAAGAGTTAAAGAGTCTCTCGCACACAAAGAGTCTGAGATTACGGGTCTGCGCGGTGAAATGTCAGATTTGAAATCCATGATGCTAGAATTTATGGGTCGTTCTGGTGGAGCCAGCTCATCAAAATAGGTACGTTTACTACTTGTTAGAATTGAATAGTTGTAAATGTAGCTATCCTGCAGTTATGGCAGCCATTTAAAACGTATATCACGAATGGATCAGTTATATGGTTATGTTTAAGTGTTGTTAGATAATTCTATTAAATTTATAAAGTTTATTGGTGAGTGTGTATGTTTTACGTTGTAAGAGCAATTTTTGGAAATTTGAAGTGTTGAGAAGGGGGAAAGTGTTATACATACTTCTAATGAAATGTTGGGGAGAGGGGAGAGGGAAGAGGGAGGGAGGGGGGGGGGGGTTATACATACTTTGAATGAAAGTGTTGGGGGATGGATGCTCCATACTTCGAAGGAAAGTGTTGGGAAGGGATGCTCTTATATTTTTTTCCTTTAGTTGAAAGATAGTGTTGGTGGGGACGCTCTATTTTAGTTTGTGAAATGCTTATTTTGAGTTCATGACATAGAGAAGTTTAAATGCTTCATCGTTTGAGTTCATATGACATGTAAAGTGAGTTAGAATAAAAGTTTGTTAACTTTTAATAGATGTGGTAAGTTAACTTTTAATGTCTAGTTTGAGTTAAATCATTCATGTGGACTGAGTTAGATATTTTTATGACTTTTAAATTAGTTTTAAGAAATAGATAAATTATTTTGTTAATATAAATTTATTTGTTATTTGTTTTTTCAGGTTTGTTCGATCCTTCTATGGAAAGATTTTTGGAAACTTGATCAAATTTTATGAATGAGCAAACTTTATAAGATGTAATTGTTTAGTATATGTTTCAATTGTTTAAGTTTGGGACATTTTAGAGTTGTCGTTACATCCGTACTGTTGTAAAACTTTTAATATTATGACTTTTTCAATGAAATTCGGTTCTTGGTCAAGGTGTTATGGAAATTTCGGATTTATACAGGAAAAAAAGGGAAGAAAAAATGCAGGATTGTACCTTTGGCAACGAACAAATTTCGTCGTCGAAGGTAATCAGTGATGAAACAAAGTTTCGTCGCTGAAAGAGGGTTTCGGTGATGAAATACAGGTTTCGTCGCCGCCAATGAGGGTTTCAGCGACGAAATACAAATTTCGCTGATTATACCTTCGGTGACGAAATTTTAGTCATGACCACGGTGTTGTCGAAGATAGTTTTGACGACAAAAATTGGCTTTCGTCGTCAAATACATCTGGTGATGGCCCTACCACGACGACTTGGGCAACGAACGATTTTCGTCGCCGAAGATCTTTGACAACGAAAATGCTGCTTTCGATGACGAAAAAATTCATCACCGAAACCTGACATTCTTGTAGTGTTGCTTGGTACCATAAAGAAAATTTTAAAGCTTTATCTTATTCTCATAACACTGACCACAAAACTTTCAAGTTGAGATAAAAATATCAAATCACAATTTAATAAATGCAATTTTTTACATGCAATCGATGTATAAATATGCCAAATACCTGCAAACGAGATCTAAGATCTAATAGCAACTATTTTAGTTACAGGAAAACATCTATGAATATTATATTTTGTGTATATCACACAACTCCTATGAATTTTTATTAAACCAACTGGTATAATTATTTAACAATTGATTTATACCTAATATGTTTACTCCTTTTAGGTAACTATATTAAATCTATCTCATCTATAAGATATATGCATTCAGATTGAACATATCTCTTATTTGAATTTTCAACCAAAAATTGATTAAGAAATAATAATTTCACATGATCATCCTCGTGACGTCTCAAATTAATTATTCTACCAATAATTACTTTAATTTCTCAAAGTCATGTCAATAAACTTCATCAAGAAGTTATATTTTTCATACTTTGCTAAATAATTTAAATAATACCAGATACACATGAATAATTAGTCAATCATCTAAGTTCATGATTTTCACATTTAATGATACTCAAGATTATGAATCTCATATAATAACAAATAACATCAAAAGGAAATAAGTTATGCACTATTTAATAGTACAATTTATTCTTTTTTCGTAGACATGCTCATAATAAATTATTTATAACTAATAATTTTATATCTTCAATATGACTATATTCAACTTTATTCCATTAAGATCTTAAATCACCAATAAAAAGATTTTAATCCATGATCCTATATTTTTTATTTTTTTTTTCTTACGAGCATCACACATATTTGACATTTTCCACATTTTCTATTTTCAACTAGAATAAGGAAATTATATTTCAAATTATATCAATAAAATAATTTTCATTCTAATGAAAAATTCATGAGTAATTAAAAATCTCAATAACCACGATAATTTAAGATATGAAATCAAACTTAAACTATTTAAATTGACATAGTCCATTACCTTTTTTTTTCACAATTTCAATCTAATCAGCTTAAAACAACTTTCACAAATAATTTCCAATTAATATTAACAACTTTTAAATCTCGGTAAGGTACTTAAAAGATTTAAAAACTTTTATGCTTATAGGAAACTCAACCTATTAAGATAATATTGCACCCCAAATAATATTGCAAAATCTTGTATAATAGATAATACGAAATTCACCTATTTAGCTTCCATATGTCTTTCTTCCATCTTTAAAATTATTTTTGGTAGCCTCCACCGACAATTGTAGTCTTTTGTGCACAATCCATCTCCAACTATAACTGCCAAAAGAGTTTCTTCAATGACCACGACGAAACGACACGCGACACAAGCAGGATCTACTCTAGCGACCATAGACCACTAATCTTCGACGAGCCCCGTATGCGGTGCATGTGACCCACGCGAGCAGATCTGCTCTGACAATGTGGTCGGCGGTGGACGACGACGCACGTACAACAGCTCACGGTGGACGGTGACCCACGTAGCAGCTCATGGTGGATGGTGCGATTGACGGCTGTGAACCACGTGTGGCGTGGCGGCAGCTGAACACAAGCAGATCTCAGATCTTAGATTCGGTGTTCTGTCCCTTGATCTCATATCCGACGTTCTGCATCGATTCAGTGTAAACCACCAAGTATGTGGCCCTCCGACTAGTACTGGTTTTTTTTCTCTCTGATTCGGAGTTCTGATGAATCGATCCAGCATAAGCAACCTCGAAGTATCAGTAGGGCCACCAGATCTGCAAACACAAGAAGCCGAACCAGCTCTACAGCGTTCTGCTCTCCGTTCGGTGAGATTCATCCAGATCTACAGCTGGCTTCGATGGGCATATCCACAAACAAATTTGGCACCAGCACAAATTTCTCCGCCATGAACATGAACATATCAGAATAG

mRNA sequence

ATGCAACAGGGCGAAGATGTCATTCAACCATCGTATGGGGCGAAGGCGTTTGCTATAATTGCCAAGGAGAAGAGCGAGGAAGATGAAGGTGATAACTTCAGTGAAATCGATCTGTTCAAAGAGACGAGATACTCCGAATCTAAAGGTTGGGTTGAAGGCGCGGAGACAGCTTATCTAGATATGATGCGCGTTAGAGAAGAATCTATGCAGACGGCGACAAATCCATGCCAGACCCAGAAGTACTGGAATCAGTTCTCGGCTGAACACAAGCAGATCTCAGATCTTAGATTCGGTGTTCTGTCCCTTGATCTCATATCCGACGTTCTGCATCGATTCAGTGTAAACCACCAACATAAGCAACCTCGAAGTATCAGTAGGGCCACCAGATCTGCAAACACAAGAAGCCGAACCAGCTCTACAGCGTTCTGCTCTCCGTTCGGTGAGATTCATCCAGATCTACAGCTGGCTTCGATGGGCATATCCACAAACAAATTTGGCACCAGCACAAATTTCTCCGCCATGAACATGAACATATCAGAATAG

Coding sequence (CDS)

ATGCAACAGGGCGAAGATGTCATTCAACCATCGTATGGGGCGAAGGCGTTTGCTATAATTGCCAAGGAGAAGAGCGAGGAAGATGAAGGTGATAACTTCAGTGAAATCGATCTGTTCAAAGAGACGAGATACTCCGAATCTAAAGGTTGGGTTGAAGGCGCGGAGACAGCTTATCTAGATATGATGCGCGTTAGAGAAGAATCTATGCAGACGGCGACAAATCCATGCCAGACCCAGAAGTACTGGAATCAGTTCTCGGCTGAACACAAGCAGATCTCAGATCTTAGATTCGGTGTTCTGTCCCTTGATCTCATATCCGACGTTCTGCATCGATTCAGTGTAAACCACCAACATAAGCAACCTCGAAGTATCAGTAGGGCCACCAGATCTGCAAACACAAGAAGCCGAACCAGCTCTACAGCGTTCTGCTCTCCGTTCGGTGAGATTCATCCAGATCTACAGCTGGCTTCGATGGGCATATCCACAAACAAATTTGGCACCAGCACAAATTTCTCCGCCATGAACATGAACATATCAGAATAG

Protein sequence

MQQGEDVIQPSYGAKAFAIIAKEKSEEDEGDNFSEIDLFKETRYSESKGWVEGAETAYLDMMRVREESMQTATNPCQTQKYWNQFSAEHKQISDLRFGVLSLDLISDVLHRFSVNHQHKQPRSISRATRSANTRSRTSSTAFCSPFGEIHPDLQLASMGISTNKFGTSTNFSAMNMNISE
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..141

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MC11g_new0469MC11g_new0469gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MC11g_new0469.1-cdsMC11g_new0469.1-cds-MC11:18613115..18613186CDS
MC11g_new0469.1-cdsMC11g_new0469.1-cds-MC11:18613268..18613369CDS
MC11g_new0469.1-cdsMC11g_new0469.1-cds-MC11:18613462..18613546CDS
MC11g_new0469.1-cdsMC11g_new0469.1-cds-MC11:18616767..18616858CDS
MC11g_new0469.1-cdsMC11g_new0469.1-cds-MC11:18616927..18617118CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MC11g_new0469.1MC11g_new0469.1-proteinpolypeptide