MC11g1322.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC11g1322.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	AP complex subunit sigma
Location	MC11: 16086697 .. 16095731 (+)
Sequence length	1329
RNA-Seq Expression	MC11g1322.1
Synteny	MC11g1322.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTGGTGATATCTTTATATATATATATTATATAATTTTTAAAATTATAAATATATAATAATATTTTTATCTATAATCCTAACCCGTGATTGTTGGTTTTTTAACTTTGAATCTTCACTTTCACTCGACCTCTCTCTCAAAGCCTCAATCCTCCGTATTATTCTCTCGCTCAAACTCCCCGTCGCCACCGGCCTTTGCAGCTTCCGTCGCCGCTCGCTGCACTAGCTTCCGTCGCCACTTGTCTTCGCCTGTCGCAGCCCGTCGTCGCCGTCGTAGCCCACCATCGCCGTCGCAGTAGCTTCAGGTCAAAATTTCTCTGATCTAAATCAATTCGTAAATGGGTTGGGTTTATACCATCCATGGGTGTGGGGAGAGATTGGTGGGTTGGGTGGTTCCAGCTTGTATCGTCTCTGTAATCGGCAAGGTAATCCTTTTCTCGTCAATTAGGGAACAAGAAAATAGGGCTCGATATGGGAATTAGGACTGACTAAGGAGATGTTAGATTATGTTGGTCTACTGCTTTATTTTATTTTATTTTTTTATCTTTTTGGATTTTTGAGCCATCGTGGTATTAAAGATATAAAATGATTTTAGTTTATCTTAACCTAACAACCTCATCTTCTAATTTTAGTTGTGATTTGATATGGTTTTTGAGTAGAAGATCTTAAATTCAGTTCCAATTGGAAAGTGTTTGCTTAGTTTGTTTGGGTTGGGTTCCCTCTACCCCAGCCCTTAGGCTGTTCCTCTCTCTCTCTCTTTTTTTTTTTTTGTCTGTATGAATGTTTCTTATCTAAAAAAAACCAATAACCTTGTGGGAGTTCAAAAGATTACATAAATTTCATGCCCATGCTCGCTAATCTACGGCTTTGGTGATGTGTACTTCCAATTTTCATTTCCAATTACAGTTTTTCGTATGCATACATACATACAAGCGAATAGACAATAAATGCGGCTGCCTTTTTAATGTTACCATTTCTATCTCTTGCATTTCCAACATATATACGATTTGTCAATTATCAGTAGACTAAGTACTTCCCAAATTCCATCTTAATAGGTAAGCAGTTGATTTCCCAAATCCAATCTATGGCTTTGCTTTTTCTCTACTAGAAAAAGCAATAAAACCTGATTTTAGATAGGGTAAACATTGTCAATCCAAGAGTCTTGCAACTCTTCTTGCCTTAAATTACATATTTTGTTTTGTTTGTTTTTTTTCCTTTTCTAAAAAGAGGAAACTATTTAAGAACTTTTATGTGCTCAAATTATTGTGTTTAAAACTACAGAGTAATGGGGTTTAACTTTTAACTGTTAACCTAATTAACAAATATCAAAATATTGTTTTTGTTTGAATAGAAAAACTTTACCGATTCTTGTCTCCCTCACGGGCCGACTTTGGGGTCTCAATTCTAAAGCAAAGGCTTCAGACTCTTCGTGCACTTAATCTCACTCTCTTGGACGGCGAGACTTCTCTCGATTTTCTCTCTCCCTCAATCTCACTCACTCTGCTAGTTCAAGGTTGGTTTCAGCTTAAATCTGTTATTTTTAAGGTTTTATGATTGGTGCGATTAATTGTTTCTTTTCTTTTCTTTTTGTTTTTTTTGATCTTGCCCAATCTGTCTGTCTCTTATAGTTCCATAATGCTCTTCGAATGTAAAATATCAAGAATTAATTAGGACTATTTTCTTTTAGCTCCAGTATGTAATGATGATTCAATTGTTCCCGTCGCAGTTTTGTTTATTACTAATGTACATTTTAGTTAATCTACTGTTTATCACTTTATTCTTTCATGAGCATGGTGATTTTTGCAAATGGGAGTTATAAATTTATTTATTTATTTTTTTGAATGTCACTATGTAGATGAGTGTCAGCTGTAGACTTTCATTCCGATAAGAGTTATCTCTTTTGATGATGTTACCTGGTACATAAGCATATTACATTTGTAGTTTCTATTAATGATCTTCAGACGTTGATTTCTCCATATTTATTGTACTTTTGTATTTCGATGAGTTTCAATTTTCTGGGGTTTGTGTTTCAATCTTAATATTGAAGCTTCAGCTACCATATCATCTCTCGATCATGTATTTAAAGTTTTATATATTAAAAGTGCATCTAAAGTTTACCTAACTTATGTGTTTTTCCCACCATTGTGTTCCCCATATTTGTTATAATTTTGTGTTTCATTGAGCTTGAAGCTTTATCTACCACAATCTTTGAAGTGAGTTTAAAATATTTATTTGTTTACTTGTGTTTTGGGGATTTGGTGGGGCAATTTGGCTATTTGAGGGGTTTTAATGGGTTTTATAGCAGACGGGCTTGTGGAGCATTCATGGGTGGGGAGAGAGATTGATGCAGCTTAGAAAGGGAAATATTATTGATAAGATTCTGACTTCAAAGATACAACAAAGGCCTTTAAATAGGCAAAACAAGCAAAGCTCACGGTAACTACAAGTCTACAAGTTACCAAGGAGTAAACTAACTAATAGAACTAAAAGACTTTAAGATAACTAGAAAGCCTTAAGCCCTAAAGGAACTTATATATGATGAGTTACATCAATTAACCTCCCCCTAAAATTAAACTCGCCCTCGAGTTAATCAGCTAACATGAAAGTATCCGGTGCAGAATAAGGATGAATGTCTGGAACATTGAAAATAGGACTTATGTTGAAATATGAGGGGAGTTCTATTTTATAAGCATTAGGCTCGTATTTCTTGAAGACTTCAAAGGGTCTGAACTTCTTCTTCTGCAACTTATGGCAGAACCAGTTGGGAGGTGACCTTTGGAGAGATGGATCATAACAAGGTCTCCTTCTTTGAAGTCTTGAGCATGGCGTTTTGTGTCAGCCTTCCTTTTGTAGTTAGAATTAGCCTTCTTAATGTGATCCTGAACTTCTTGATGTAGTTGTTTAATCCTCTTCGCCATTTGAGCAGCTTCCATACTAAAATCAACAGAAGAAGGGATATTAGCCAAGTCAACAGTTAATCGAGGAAGTTTAGTATAAACTATCTCAAATGGTGACTTGCCTGTGGTTCTATTCTGCATGTGGTTGAAGGCAAATTCGGCCTGTGCAAGAGTTGAATCCCATTGCTTTGGTCTGTCACTACAAAGGCAGCGTATAAGGTTGCCAAGTGTCCTCTTAGTCACCTCCGTTTGCCCATCAGTTTGGGGTGATTCTTTGTACTATATTTAAGAGATGTGTCAAACTTCTTCCATAGTGTTTTCCAAAATTGACTTAGGAATTTGACATCCCCATCCGAAACAGTTGACTTTGTTATGTGCCATGAAGACGAACAATTTCTTTAAAGAAGTTGTTTGCCACATAGACAGCATCCGAGGTTTTCTTGCATGCTAAAAAGTGTGCCATCTTGCTGAAACAGTCAACCACAACCAAGACAGAATCAAAGCCAAGGGTAATCCCAAGATGAAATCCATAGATAAATCCTCCCGTATAGTTTCGGGAGTGGGAAGGGGAGTATATAGTCCTGTATTGAGCTTGGTGCCTTTTGTTTGACGAACAAAGCATTTAGAAACATAGATGACCACATATTTTCTTAATTGAGGCCAGTAGAAACGGGTAGCCACAAGGTGGATGGTTTTATCACGACCAAAATCAAAATGTCCAGCCAACCCCCCCAAATGCAAGTCCTTAATTAGGGCTGTTCTTAAAGATGTGCCGGGAATGCAAAGTTGATCTCCTTTAAAGAGATAACCATTCAGTAAATGAAAATCCCCTGAATTACTGTTGTCATTGCATTTTCCAAGCATCATTGAAATCTGGATCGTTTGCATAAGAGGATGGGAAGTTAGAAAAAACTATAATTTCACCTTGCAATAGAGTTAATAATGTTCCCGTTCGACTAAGTGCATCTGCTGCCTTGAAAGTCCCATCCTTATATTTGATGACAAAGTCAAACTGTTGCAAAAATGATAGCCATCTCGCGTGCATTCTGCTAATGTTCTTTTGAGTTTGAAGAAACTTAAGAGAGAAATGATCAGTAAATTAAATAAATTCATTACACAGTAAGTAGTGTTCCCATTGTTTGAGTGCGCAGACAACGACATATAACTCTTGCTCATATGTACTACAATTTTGGCGAGATGGGCTTAATTTTTCACTAAAATACTCTATAGGGTACCGGTTTTGGGATACGACAGCCCCAATTCCTAGTTCGGATGCATCTACAGCTACCTCAAAAGGTTGGGTAAAGTCAGGGAGGTGAAGGACTGGACTTTGTGTGAGTTTCTCTTCGAGGATTTTGAAACTATTGGTTTGGGCAGTGTCCCAGTGGAAGTTTCCTTTCTTAAGGCAATCTGTTAAGGGACTAGCTAAGGTGCTAAAGTTTTTTATGAATTTTCAATAAAAGGAGGCTATCCCTAGAAAATATTGTATATCTTTGATAGTTTGTGGTTGGGGCCATTCCAATATAGCTTTGAGTCTGGAAGGATCCATTCGAATGCCATCAGCACTAATAATGAAACCTAAGAAGGAGATTTCAGTAACTAAGAAGACGCATTTTTTTAGATTTATCACAAGTTGGTGCTCATGTAAAGTAGTGAATAGTAGGTTAAGATGTTCTAGATGATCCTCCCTATTCTTGCTATACACCAAGATATCATCGAAGTAAACAACAGTAAATTTATTGAGAAAATGGAGAAGTACTTGATTCATCAAATGCATAAAAGTGCTGGGGGCATTATAGATCGAATGACATAATCAACCATTCAAACAAACCTTCGTTGGTCTTAGAAGCAGTCTTGCACTTGTCCCCTGGTCTTATGAAAATTTGATGGTATCCGCTACGTAAATCTACTTTAGAGAAGATTTACAGAAGAAGTGAGCTCTGCCCAATTGGTCTAGCAAGTCATTAATCCGAGGTATAGGGAATCTGTATTTGACAATAATCTTATTAATTACCCTACTATTGACACACATCCTTCAAGAACCATCTTTTTTGGGAGTAAGTAGGGCAGGGACCGCACACAGCTTAGACTCAGCTGAATATGCCCTTTTTCAAGAAGCTGCGTGATGCAATCATGGAGGATCTTATACTCTGCGGGGCTCATTCCTTAATGAGGTAGATTTGGGAATGTGGCACTCGGGATTAAGTCAATGTGACATTGTATGTTGCGTAGGGGAGGTAAGGAGTTTTGGAGTTTGAACAATTGTGGAAATTTGTAAAGGATGTTTTGTATAGGTTGTGGGGTGTCTGCCATGGACAGATTCTCTAAGCTGATTTATTTGATGACCAGACCTGGAATAGGCTCTGTTTGATGGATTAAAAGCTGTTTCCCGCTGTAGATATGGAATAGATGACCTTTATCAATGCCTTTAGAGGATGTTGGGTTGTTTAAAGGTAAAAGGACCACAGTTTTTCCCATCCAAGAAAACTTGTATGTGTTTTCTAGTCGTTTAAGCTTGAATATCGTATTGCCAATATCTTCCCAAAAGAATATGGCATACATCCATATCCAAGATACATGTGATTTGATCTTTGTAACTATTCCCAATAGAAAGGGAACTGTACATATGGTATTGACCAATGCCTCTCCTCCTTTCCTAATCTAACTTACTTTGTAAGAAGTAGGGTGAGGAGAGACTTTGAGATTCAACGTTGCTGTCACTAGCTTGCTAGATACCACATTTTCAGTATTCCCACTATCTATTATTATGTTGCAAACTTTCCCATTTACAGTACATCTCGTGCGAACCAAAGAATGCCTTTGGGGAATCGGGTTTGTTTTTGGTGTAAGAAGGATTCATTCCAAGACACATGTTACCTGTTCACCTTCATCCGGCTCTAGATAAGCGACCACTTCATCCGATTCTTGGTCACAAGTTGGACAATACATGTTTGCTTCCTTTTCCTATCTCCATTGTTTTCCCTTTCGAACTGTAGTTCAAAAGTTGATTTTATATTATGATTGTCATCGGCAACAATTAGTCTGCAAACTTCGTTGCATTTAAAAAACATAGGCTTAGTGAAGTAAAGCACAGGCTCAGTGCATTTAACAAATTAACGCACAAAGAATTGAAGTATTTATTTATTTTTTTTTTCAGGAGGTTGTGGCTTATTAATTGATTTGTCAATGTTTCAATTGAAGTATTCATATTTTTTCTTTATACTGGACAACTAGTAAGAACTCTGTTAGATGTAAACAAAGATTAAAACAAAATCATCAGTTTATTTTATAGAAGGATAAGAGTTTGGCTAAATTCATGAAACAAAAACGACACTTTTGTAGGTTATTTCTATACTGCAAATCCTTCTTATATTCAAGTCCATAGCCATTTTTAGCCACTTGCACTTTTTCCATAAAATAATATTACTGGAGCTTAAGCCACTTGCATATATTTATCTATAAAGCAATATGAGCTCATCAAGAAGTTAGCCTTAGGGGGCATGTGAGCGTGATACAAGCAGTAAATCGTATGTGCAAGTGCTGTAATCGAGACGATATAAATCGGGCATGCGAGCACCGTAATCAGTTGGATTGTTCGGACCACCATGATACGGGCAGTAATAGTGATGAATACTCAGGGCAAGCCTCGTTTTGCTAAGTTCTATGATTTTCAGGTCCTTTTTTGCGAATTTCGTTTCGTGTTTTCCTATTGCTTTTTTCATTACCGTCTAATTTTGAGTTCTTGAATTCAGCCTGTAGAGAAGCAGCAGGATCTCATTCGCAGCGTCTACGGAGGTTGGCAATTTTGTCTTTCGATTATATTTTTGTAATTTACTAAAATAATCAGGAGTATTTCCACTATTGCAGCTATGGTTTCTTTAACCTTAATTTCTATTTTGCTTTCTTCTTCTTTTCGGTTTGGAAAAGTACTCTCCAGTCGAGCTGAAAACGTCAGCAATTTCGTGGAGGCCGAGTCCATCTTTGGTTCGGTAATTTTTTGTTGATCGCATAATTCATTGTCCAATAATTTCCTTCTGGTCATTACTGTGTATAGGATGTATTGTATTTACAAATCTATGATTCTCGGAGAAGCTAGATATTTGTCGAAATGAATATCTATTTGGCATTATTTAACCAATTATAATATATTTACAGAATGGCCTTTGTTATTAGTGGACTTGTTAGTGCTAATGCCAGATAAATTTAGTTCTATGTCGCTTGCTGTGCAGAAGTCTCTTTAACTTTGCCTTCAATGAACCACGAGGATTGTACTTTTCTTTTTGCTGCAGGACTCTCGTCTTGTATACAAACACTTTGCAACCCTTTATTTCGTGTTTGTATTTAACGGCTCTGAGAATGAGCTTGCCATGCTTGACCTGATTCAAGGTGCGTCCAACTGTCTTGGATTGGTGACCACTGAATCAATCTTGATCTAAATATTATTTACATGTAAAACTACACGTTACCTATGCTGTGAGTTTAGTACTTGATTCCTCAAGTTTTTAAACTCGATGTTATCATGTTATGTTTTGATGTTTTTTAGTTCATAATTACAAGAAGTGTTTAGAGAAGCAATTGATACAAAGAATAATGAAACGTGGGCTTAGAATTCTCTTACTTAAGATACCTAAATAATTGCCCAGACTCCAAGAAGTATGTTTTTTCATTAAAGTTTCATGAATCAAGTCATATATTTGAATGTAGCTGAATCTGGATCTTATCTTTACAAGTTTTTCATTTCAAGTTTCTAGTAGGATGACGTGATTAGTATTGTAATCTTGTGTTACTCTTTAATTGACTTCTCATTTTAAGTCCTGCTGCTTCAGTTTTTGTAGAAACATTGGACAAGTGTTTCAAAAATGTATGTGAGCTTGACTTAGTGTACAATTATAGCAAGGTTTGCTCTCTCTCTCACACAAATACTATACAGTCTTCTCACACACAAGTTTGCTTTTGAAATGGCCTAAAGCTAAGGGTGTACACGGTTTGGGTTGGGTTGAGGGGGTTTTTTGGACCAACCCGGGTTGGTAGGTTTAGTGACCTGATAGAATCAAATTAATTGAGCAACACAACCCAACCCAGCCCTTGTATTTTTTGGTTGGGTTGGGTTGAGTTGGGTTGTTGCTCCTTTTTTATTTTTTTATATAGATCGAGATTAATAAAACGAAACGAGAGATTAGAAGAAGAAAATTTTGACAAAAAAAAAAAGGTGAATAAGTGTGTTTGGCTCCTCTTACAGCAAAAGATAAAAAAGGGAAGAATCGTTGTGAGAGAAGAGATGAAAGAGATGAGGTGAGGGTTGAGGAATATGGAGAGTCAGAGACGAGGGATTGTCGGAGAAGATTGTGGTGCTGGCGGTGAGACGAACAAGAGGGGGAGGGCATGCGAGATGGGGCATGGGAGGGAGATGAGAGAAGGGAGGGGGTTGTCCAGGTTGTTTGGATTTCTAAAATATCCAACCCCCGAACCGAAATTTCGGATTTCTAAAAAACCAACCCAATCCAAACTGAAATTTTTTAAAACCCAACCCAACACTTATGGTTTGGGGGTTGTCCAGATTGTTTGGGTTACCGAGTTTCTTTAACACCCCTACCTAATGCACTCCGTTGATTACATGACTGTCAATGCATTCTTCTCAACATTTAAATTTGAAATAAAACTTCCATGCAGATGCATACTATTTTGGATGAAATCATTTCTGGTGGCCAAGTGCTAGAGACTAGTTCTTCTGAAGTGATGAAGGCAGTTGAAGAAATATCGAAGTGCTCTCTCTCATCCAAGAAAATGTTTATTGTTTTGTGTGGTTTTAAGTATTTTAATACATGTTGATGTTATTGCACTGGCATTGCAGGTTAGAGACAAACTCAAATGCTATCAACTTCGTCTCCAAAACGGTCTCGGGTTGGCGGGGTTGAGTTTGTTGGTTTAAGCGAGCTCGTTAAACAATTTGGAATGTATTCTTTTGATGCCTCGTCTTCAAATTTTCTCTTGATCCGTTGATTTTAATTGATTACTTGGATTGACAAGTCACCATTTATCTTATTTGAAGACACATTTTGACATGTTTTCCAAATAAATAATTTGTAATATAATCATTTGAATTTTTTTCTTAAATAATTATTTTTTAAAAATAAATGACA

mRNA sequence

CCTGGTGATATCTTTATATATATATATTATATAATTTTTAAAATTATAAATATATAATAATATTTTTATCTATAATCCTAACCCGTGATTGTTGGTTTTTTAACTTTGAATCTTCACTTTCACTCGACCTCTCTCTCAAAGCCTCAATCCTCCGTATTATTCTCTCGCTCAAACTCCCCGTCGCCACCGGCCTTTGCAGCTTCCGTCGCCGCTCGCTGCACTAGCTTCCGTCGCCACTTGTCTTCGCCTGTCGCAGCCCGTCGTCGCCGTCGTAGCCCACCATCGCCGTCGCAGTAGCTTCAGAAAAACTTTACCGATTCTTGTCTCCCTCACGGGCCGACTTTGGGGTCTCAATTCTAAAGCAAAGGCTTCAGACTCTTCGTGCACTTAATCTCACTCTCTTGGACGGCGAGACTTCTCTCGATTTTCTCTCTCCCTCAATCTCACTCACTCTGCTAGTTCAAGCAATATGAGCTCATCAAGAAGTTAGCCTTAGGGGGCATGTGAGCGTGATACAAGCAGTAAATCGTATGTGCAAGTGCTGTAATCGAGACGATATAAATCGGGCATGCGAGCACCGTAATCAGTTGGATTGTTCGGACCACCATGATACGGGCAGTAATAGTGATGAATACTCAGGGCAAGCCTCGTTTTGCTAAGTTCTATGATTTTCAGCCTGTAGAGAAGCAGCAGGATCTCATTCGCAGCGTCTACGGAGTACTCTCCAGTCGAGCTGAAAACGTCAGCAATTTCGTGGAGGCCGAGTCCATCTTTGGTTCGGACTCTCGTCTTGTATACAAACACTTTGCAACCCTTTATTTCGTGTTTGTATTTAACGGCTCTGAGAATGAGCTTGCCATGCTTGACCTGATTCAAGTTTTTGTAGAAACATTGGACAAGTGTTTCAAAAATGTATGTGAGCTTGACTTAGTGTACAATTATAGCAAGATGCATACTATTTTGGATGAAATCATTTCTGGTGGCCAAGTGCTAGAGACTAGTTCTTCTGAAGTGATGAAGGCAGTTGAAGAAATATCGAAGTTAGAGACAAACTCAAATGCTATCAACTTCGTCTCCAAAACGGTCTCGGGTTGGCGGGGTTGAGTTTGTTGGTTTAAGCGAGCTCGTTAAACAATTTGGAATGTATTCTTTTGATGCCTCGTCTTCAAATTTTCTCTTGATCCGTTGATTTTAATTGATTACTTGGATTGACAAGTCACCATTTATCTTATTTGAAGACACATTTTGACATGTTTTCCAAATAAATAATTTGTAATATAATCATTTGAATTTTTTTCTTAAATAATTATTTTTTAAAAATAAATGACA

Coding sequence (CDS)

ATGATACGGGCAGTAATAGTGATGAATACTCAGGGCAAGCCTCGTTTTGCTAAGTTCTATGATTTTCAGCCTGTAGAGAAGCAGCAGGATCTCATTCGCAGCGTCTACGGAGTACTCTCCAGTCGAGCTGAAAACGTCAGCAATTTCGTGGAGGCCGAGTCCATCTTTGGTTCGGACTCTCGTCTTGTATACAAACACTTTGCAACCCTTTATTTCGTGTTTGTATTTAACGGCTCTGAGAATGAGCTTGCCATGCTTGACCTGATTCAAGTTTTTGTAGAAACATTGGACAAGTGTTTCAAAAATGTATGTGAGCTTGACTTAGTGTACAATTATAGCAAGATGCATACTATTTTGGATGAAATCATTTCTGGTGGCCAAGTGCTAGAGACTAGTTCTTCTGAAGTGATGAAGGCAGTTGAAGAAATATCGAAGTTAGAGACAAACTCAAATGCTATCAACTTCGTCTCCAAAACGGTCTCGGGTTGGCGGGGTTGA

Protein sequence

MIRAVIVMNTQGKPRFAKFYDFQPVEKQQDLIRSVYGVLSSRAENVSNFVEAESIFGSDSRLVYKHFATLYFVFVFNGSENELAMLDLIQVFVETLDKCFKNVCELDLVYNYSKMHTILDEIISGGQVLETSSSEVMKAVEEISKLETNSNAINFVSKTVSGWRG

Homology

[Close]

BLAST of MC11g1322.1 vs. ExPASy Swiss-Prot
Match: Q8VZ37 (AP-3 complex subunit sigma OS=Arabidopsis thaliana OX=3702 GN=At3g50860 PE=2 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 3.7e-69
Identity = 130/165 (78.79%), Postives = 148/165 (89.70%), Query Frame = 0


Query: 1   MIRAVIVMNTQGKPRFAKFYDFQPVEKQQDLIRSVYGVLSSRAENVSNFVEAESIFGSDS 60
           MI+AV++MNTQGKPR AKFYD+ PVEKQQ+LIR V+ VL SR ENVSNF+E ES+FG DS
Sbjct: 1   MIKAVMMMNTQGKPRLAKFYDYLPVEKQQELIRGVFSVLCSRPENVSNFLEIESLFGPDS 60

Query: 61  RLVYKHFATLYFVFVFNGSENELAMLDLIQVFVETLDKCFKNVCELDLVYNYSKMHTILD 120
           RLVYKH+ATLYFV VF+GSENELAMLDLIQV VETLDKCF NVCELD+V+NYSKMH +LD
Sbjct: 61  RLVYKHYATLYFVLVFDGSENELAMLDLIQVLVETLDKCFSNVCELDIVFNYSKMHAVLD 120

Query: 121 EIISGGQVLETSSSEVMKAVEEISKLETNSNAINFVSKTVSGWRG 166
           EI+ GGQVLETSS+EVMKAVEEISKLE  SN+I+ V K+VSGWRG
Sbjct: 121 EIVFGGQVLETSSAEVMKAVEEISKLEAASNSISLVPKSVSGWRG 165

[Close]

BLAST of MC11g1322.1 vs. ExPASy Swiss-Prot
Match: Q2YDH6 (AP-3 complex subunit sigma-1 OS=Bos taurus OX=9913 GN=AP3S1 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 5.2e-39
Identity = 77/148 (52.03%), Postives = 111/148 (75.00%), Query Frame = 0


Query: 1   MIRAVIVMNTQGKPRFAKFYDFQPVEKQQDLIRSVYGVLSSRAENVSNFVEAESIF-GSD 60
           MI+A+++ N  GKPR +KFY     + QQ +IR  + ++S R ENV NF+E   +  GSD
Sbjct: 1   MIKAILIFNNHGKPRLSKFYQPYSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSD 60

Query: 61  SRLVYKHFATLYFVFVFNGSENELAMLDLIQVFVETLDKCFKNVCELDLVYNYSKMHTIL 120
           ++L+Y+H+ATLYFVF  + SE+EL +LDLIQVFVETLDKCF+NVCELDL+++  K+H IL
Sbjct: 61  NKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHNIL 120

Query: 121 DEIISGGQVLETSSSEVMKAVEEISKLE 148
            E++ GG VLET+ +E++  ++  +KLE
Sbjct: 121 AEMVMGGMVLETNMNEIVTQIDAQNKLE 148

[Close]

BLAST of MC11g1322.1 vs. ExPASy Swiss-Prot
Match: Q92572 (AP-3 complex subunit sigma-1 OS=Homo sapiens OX=9606 GN=AP3S1 PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 5.2e-39
Identity = 77/148 (52.03%), Postives = 111/148 (75.00%), Query Frame = 0


Query: 1   MIRAVIVMNTQGKPRFAKFYDFQPVEKQQDLIRSVYGVLSSRAENVSNFVEAESIF-GSD 60
           MI+A+++ N  GKPR +KFY     + QQ +IR  + ++S R ENV NF+E   +  GSD
Sbjct: 1   MIKAILIFNNHGKPRLSKFYQPYSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSD 60

Query: 61  SRLVYKHFATLYFVFVFNGSENELAMLDLIQVFVETLDKCFKNVCELDLVYNYSKMHTIL 120
           ++L+Y+H+ATLYFVF  + SE+EL +LDLIQVFVETLDKCF+NVCELDL+++  K+H IL
Sbjct: 61  NKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHNIL 120

Query: 121 DEIISGGQVLETSSSEVMKAVEEISKLE 148
            E++ GG VLET+ +E++  ++  +KLE
Sbjct: 121 AEMVMGGMVLETNMNEIVTQIDAQNKLE 148

[Close]

BLAST of MC11g1322.1 vs. ExPASy Swiss-Prot
Match: Q9DCR2 (AP-3 complex subunit sigma-1 OS=Mus musculus OX=10090 GN=Ap3s1 PE=1 SV=2)

HSP 1 Score: 162.2 bits (409), Expect = 5.2e-39
Identity = 77/148 (52.03%), Postives = 111/148 (75.00%), Query Frame = 0


Query: 1   MIRAVIVMNTQGKPRFAKFYDFQPVEKQQDLIRSVYGVLSSRAENVSNFVEAESIF-GSD 60
           MI+A+++ N  GKPR +KFY     + QQ +IR  + ++S R ENV NF+E   +  GSD
Sbjct: 1   MIKAILIFNNHGKPRLSKFYQPYSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSD 60

Query: 61  SRLVYKHFATLYFVFVFNGSENELAMLDLIQVFVETLDKCFKNVCELDLVYNYSKMHTIL 120
           ++L+Y+H+ATLYFVF  + SE+EL +LDLIQVFVETLDKCF+NVCELDL+++  K+H IL
Sbjct: 61  NKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHNIL 120

Query: 121 DEIISGGQVLETSSSEVMKAVEEISKLE 148
            E++ GG VLET+ +E++  ++  +KLE
Sbjct: 121 AEMVMGGMVLETNMNEIVTQIDAQNKLE 148

[Close]

BLAST of MC11g1322.1 vs. ExPASy Swiss-Prot
Match: Q1JQA3 (AP-3 complex subunit sigma-2 OS=Bos taurus OX=9913 GN=AP3S2 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 6.7e-39
Identity = 76/155 (49.03%), Postives = 113/155 (72.90%), Query Frame = 0


Query: 1   MIRAVIVMNTQGKPRFAKFYDFQPVEKQQDLIRSVYGVLSSRAENVSNFVEAESIF-GSD 60
           MI+A++V N  GKPR  +FY   P E QQ ++R  + ++  R +N+ NF+E  S+  GSD
Sbjct: 1   MIQAILVFNNHGKPRLVRFYQRFPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSD 60

Query: 61  SRLVYKHFATLYFVFVFNGSENELAMLDLIQVFVETLDKCFKNVCELDLVYNYSKMHTIL 120
            +L+Y+H+ATLYFVF  + SE+EL +LDLIQVFVETLDKCF+NVCELDL+++  K+H IL
Sbjct: 61  YKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHYIL 120

Query: 121 DEIISGGQVLETSSSEVMKAVEEISKLETNSNAIN 155
            E++ GG VLET+ +E++  +E  ++LE +   ++
Sbjct: 121 QEVVMGGMVLETNMNEIVAQIEAQNRLEKSEGGLS 155

[Close]

BLAST of MC11g1322.1 vs. NCBI nr
Match: XP_022159031.1 (AP-3 complex subunit sigma [Momordica charantia] >XP_022159032.1 AP-3 complex subunit sigma [Momordica charantia] >XP_022159033.1 AP-3 complex subunit sigma [Momordica charantia] >XP_022159034.1 AP-3 complex subunit sigma [Momordica charantia])

HSP 1 Score: 320 bits (819), Expect = 6.68e-110
Identity = 164/165 (99.39%), Postives = 164/165 (99.39%), Query Frame = 0


Query: 1   MIRAVIVMNTQGKPRFAKFYDFQPVEKQQDLIRSVYGVLSSRAENVSNFVEAESIFGSDS 60
           MIRAVIVMNTQGKPRFAKFYDFQPVEKQQDLIRSVYGVLSSRAENVSNFVEAESIFG DS
Sbjct: 1   MIRAVIVMNTQGKPRFAKFYDFQPVEKQQDLIRSVYGVLSSRAENVSNFVEAESIFGXDS 60

Query: 61  RLVYKHFATLYFVFVFNGSENELAMLDLIQVFVETLDKCFKNVCELDLVYNYSKMHTILD 120
           RLVYKHFATLYFVFVFNGSENELAMLDLIQVFVETLDKCFKNVCELDLVYNYSKMHTILD
Sbjct: 61  RLVYKHFATLYFVFVFNGSENELAMLDLIQVFVETLDKCFKNVCELDLVYNYSKMHTILD 120

Query: 121 EIISGGQVLETSSSEVMKAVEEISKLETNSNAINFVSKTVSGWRG 165
           EIISGGQVLETSSSEVMKAVEEISKLETNSNAINFVSKTVSGWRG
Sbjct: 121 EIISGGQVLETSSSEVMKAVEEISKLETNSNAINFVSKTVSGWRG 165

[Close]

BLAST of MC11g1322.1 vs. NCBI nr
Match: XP_008452384.1 (PREDICTED: AP-3 complex subunit sigma [Cucumis melo] >XP_008452386.1 PREDICTED: AP-3 complex subunit sigma [Cucumis melo] >XP_008452387.1 PREDICTED: AP-3 complex subunit sigma [Cucumis melo] >XP_008452388.1 PREDICTED: AP-3 complex subunit sigma [Cucumis melo] >XP_008452389.1 PREDICTED: AP-3 complex subunit sigma [Cucumis melo] >XP_008452390.1 PREDICTED: AP-3 complex subunit sigma [Cucumis melo] >XP_008452391.1 PREDICTED: AP-3 complex subunit sigma [Cucumis melo] >XP_016901330.1 PREDICTED: AP-3 complex subunit sigma [Cucumis melo])

HSP 1 Score: 303 bits (776), Expect = 2.41e-103
Identity = 153/165 (92.73%), Postives = 161/165 (97.58%), Query Frame = 0


Query: 1   MIRAVIVMNTQGKPRFAKFYDFQPVEKQQDLIRSVYGVLSSRAENVSNFVEAESIFGSDS 60
           MIR+VIVMNT+GKPRFAKFYDFQP+EKQQ+LIRSVYGVL SRAEN+SNFVEAESIFGSDS
Sbjct: 1   MIRSVIVMNTEGKPRFAKFYDFQPIEKQQELIRSVYGVLCSRAENISNFVEAESIFGSDS 60

Query: 61  RLVYKHFATLYFVFVFNGSENELAMLDLIQVFVETLDKCFKNVCELDLVYNYSKMHTILD 120
           RLVYKHFATLYFV VFN SENELAMLDLIQVFVETLDKCFKNVCELDLV+NYSKMH+ILD
Sbjct: 61  RLVYKHFATLYFVLVFNSSENELAMLDLIQVFVETLDKCFKNVCELDLVFNYSKMHSILD 120

Query: 121 EIISGGQVLETSSSEVMKAVEEISKLETNSNAINFVSKTVSGWRG 165
           EIISGGQVLETSSSEVMKAVEEISKLET SN+INFVSKTVSGWRG
Sbjct: 121 EIISGGQVLETSSSEVMKAVEEISKLETASNSINFVSKTVSGWRG 165

[Close]

BLAST of MC11g1322.1 vs. NCBI nr
Match: XP_038893159.1 (AP-3 complex subunit sigma [Benincasa hispida] >XP_038893161.1 AP-3 complex subunit sigma [Benincasa hispida] >XP_038893162.1 AP-3 complex subunit sigma [Benincasa hispida] >XP_038893163.1 AP-3 complex subunit sigma [Benincasa hispida])

HSP 1 Score: 301 bits (771), Expect = 1.39e-102
Identity = 155/165 (93.94%), Postives = 159/165 (96.36%), Query Frame = 0


Query: 1   MIRAVIVMNTQGKPRFAKFYDFQPVEKQQDLIRSVYGVLSSRAENVSNFVEAESIFGSDS 60
           MIRAVIVMNTQGKPRFAKFY+FQPVEKQQ+LIRSVYGVL SRAENVSNFVEAESIFG DS
Sbjct: 1   MIRAVIVMNTQGKPRFAKFYNFQPVEKQQELIRSVYGVLCSRAENVSNFVEAESIFGPDS 60

Query: 61  RLVYKHFATLYFVFVFNGSENELAMLDLIQVFVETLDKCFKNVCELDLVYNYSKMHTILD 120
           RLVYKHFATLYFV VFN SENELAMLDLIQVFVETLDKCFKNVCELDLV+NYSKMHTILD
Sbjct: 61  RLVYKHFATLYFVLVFNSSENELAMLDLIQVFVETLDKCFKNVCELDLVFNYSKMHTILD 120

Query: 121 EIISGGQVLETSSSEVMKAVEEISKLETNSNAINFVSKTVSGWRG 165
           EIISGGQVLETSSS VMKAVEEISKLET SN+INFVSKTVSGWRG
Sbjct: 121 EIISGGQVLETSSSGVMKAVEEISKLETASNSINFVSKTVSGWRG 165

[Close]

BLAST of MC11g1322.1 vs. NCBI nr
Match: KAG6603975.1 (AP-3 complex subunit sigma, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034147.1 AP-3 complex subunit sigma, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 301 bits (770), Expect = 1.98e-102
Identity = 153/165 (92.73%), Postives = 161/165 (97.58%), Query Frame = 0


Query: 1   MIRAVIVMNTQGKPRFAKFYDFQPVEKQQDLIRSVYGVLSSRAENVSNFVEAESIFGSDS 60
           MIRAVIVMNTQGKPRFAKFYDFQPVEKQQ+LIRSV+GVL SRAENVSNFVEAESIFG DS
Sbjct: 1   MIRAVIVMNTQGKPRFAKFYDFQPVEKQQELIRSVHGVLCSRAENVSNFVEAESIFGPDS 60

Query: 61  RLVYKHFATLYFVFVFNGSENELAMLDLIQVFVETLDKCFKNVCELDLVYNYSKMHTILD 120
           RLVYKHFATLYFVFVFN SENELAMLDLIQVFVETLDKCFKNVCELDLV+NY+KMH+ILD
Sbjct: 61  RLVYKHFATLYFVFVFNSSENELAMLDLIQVFVETLDKCFKNVCELDLVFNYTKMHSILD 120

Query: 121 EIISGGQVLETSSSEVMKAVEEISKLETNSNAINFVSKTVSGWRG 165
           EIISGGQVLETSS+EV+KAVEEISKLET SN+INFVSKTVSGWRG
Sbjct: 121 EIISGGQVLETSSAEVVKAVEEISKLETASNSINFVSKTVSGWRG 165

[Close]

BLAST of MC11g1322.1 vs. NCBI nr
Match: XP_022978569.1 (AP-3 complex subunit sigma-like [Cucurbita maxima])

HSP 1 Score: 300 bits (767), Expect = 5.68e-102
Identity = 152/165 (92.12%), Postives = 161/165 (97.58%), Query Frame = 0


Query: 1   MIRAVIVMNTQGKPRFAKFYDFQPVEKQQDLIRSVYGVLSSRAENVSNFVEAESIFGSDS 60
           MIRAVIVMNTQGKPRFAKFYDFQPVEKQQ+LIRSV+GVL SRAENVSNFVEAESIFG DS
Sbjct: 1   MIRAVIVMNTQGKPRFAKFYDFQPVEKQQELIRSVHGVLCSRAENVSNFVEAESIFGPDS 60

Query: 61  RLVYKHFATLYFVFVFNGSENELAMLDLIQVFVETLDKCFKNVCELDLVYNYSKMHTILD 120
           R+VYKHFATLYFVFVFN SENELAMLDLIQVFVETLDKCFKNVCELDLV+NY+KMH+ILD
Sbjct: 61  RVVYKHFATLYFVFVFNSSENELAMLDLIQVFVETLDKCFKNVCELDLVFNYTKMHSILD 120

Query: 121 EIISGGQVLETSSSEVMKAVEEISKLETNSNAINFVSKTVSGWRG 165
           EIISGGQVLETSS+EV+KAVEEISKLET SN+INFVSKTVSGWRG
Sbjct: 121 EIISGGQVLETSSAEVVKAVEEISKLETASNSINFVSKTVSGWRG 165

[Close]

BLAST of MC11g1322.1 vs. ExPASy TrEMBL
Match: A0A6J1E2P6 (AP complex subunit sigma OS=Momordica charantia OX=3673 GN=LOC111025475 PE=3 SV=1)

HSP 1 Score: 320 bits (819), Expect = 3.24e-110
Identity = 164/165 (99.39%), Postives = 164/165 (99.39%), Query Frame = 0


Query: 1   MIRAVIVMNTQGKPRFAKFYDFQPVEKQQDLIRSVYGVLSSRAENVSNFVEAESIFGSDS 60
           MIRAVIVMNTQGKPRFAKFYDFQPVEKQQDLIRSVYGVLSSRAENVSNFVEAESIFG DS
Sbjct: 1   MIRAVIVMNTQGKPRFAKFYDFQPVEKQQDLIRSVYGVLSSRAENVSNFVEAESIFGXDS 60

Query: 61  RLVYKHFATLYFVFVFNGSENELAMLDLIQVFVETLDKCFKNVCELDLVYNYSKMHTILD 120
           RLVYKHFATLYFVFVFNGSENELAMLDLIQVFVETLDKCFKNVCELDLVYNYSKMHTILD
Sbjct: 61  RLVYKHFATLYFVFVFNGSENELAMLDLIQVFVETLDKCFKNVCELDLVYNYSKMHTILD 120

Query: 121 EIISGGQVLETSSSEVMKAVEEISKLETNSNAINFVSKTVSGWRG 165
           EIISGGQVLETSSSEVMKAVEEISKLETNSNAINFVSKTVSGWRG
Sbjct: 121 EIISGGQVLETSSSEVMKAVEEISKLETNSNAINFVSKTVSGWRG 165

[Close]

BLAST of MC11g1322.1 vs. ExPASy TrEMBL
Match: A0A1S3BT37 (AP complex subunit sigma OS=Cucumis melo OX=3656 GN=LOC103493438 PE=3 SV=1)

HSP 1 Score: 303 bits (776), Expect = 1.17e-103
Identity = 153/165 (92.73%), Postives = 161/165 (97.58%), Query Frame = 0


Query: 1   MIRAVIVMNTQGKPRFAKFYDFQPVEKQQDLIRSVYGVLSSRAENVSNFVEAESIFGSDS 60
           MIR+VIVMNT+GKPRFAKFYDFQP+EKQQ+LIRSVYGVL SRAEN+SNFVEAESIFGSDS
Sbjct: 1   MIRSVIVMNTEGKPRFAKFYDFQPIEKQQELIRSVYGVLCSRAENISNFVEAESIFGSDS 60

Query: 61  RLVYKHFATLYFVFVFNGSENELAMLDLIQVFVETLDKCFKNVCELDLVYNYSKMHTILD 120
           RLVYKHFATLYFV VFN SENELAMLDLIQVFVETLDKCFKNVCELDLV+NYSKMH+ILD
Sbjct: 61  RLVYKHFATLYFVLVFNSSENELAMLDLIQVFVETLDKCFKNVCELDLVFNYSKMHSILD 120

Query: 121 EIISGGQVLETSSSEVMKAVEEISKLETNSNAINFVSKTVSGWRG 165
           EIISGGQVLETSSSEVMKAVEEISKLET SN+INFVSKTVSGWRG
Sbjct: 121 EIISGGQVLETSSSEVMKAVEEISKLETASNSINFVSKTVSGWRG 165

[Close]

BLAST of MC11g1322.1 vs. ExPASy TrEMBL
Match: A0A6J1IUE1 (AP complex subunit sigma OS=Cucurbita maxima OX=3661 GN=LOC111478508 PE=3 SV=1)

HSP 1 Score: 300 bits (767), Expect = 2.75e-102
Identity = 152/165 (92.12%), Postives = 161/165 (97.58%), Query Frame = 0


Query: 1   MIRAVIVMNTQGKPRFAKFYDFQPVEKQQDLIRSVYGVLSSRAENVSNFVEAESIFGSDS 60
           MIRAVIVMNTQGKPRFAKFYDFQPVEKQQ+LIRSV+GVL SRAENVSNFVEAESIFG DS
Sbjct: 1   MIRAVIVMNTQGKPRFAKFYDFQPVEKQQELIRSVHGVLCSRAENVSNFVEAESIFGPDS 60

Query: 61  RLVYKHFATLYFVFVFNGSENELAMLDLIQVFVETLDKCFKNVCELDLVYNYSKMHTILD 120
           R+VYKHFATLYFVFVFN SENELAMLDLIQVFVETLDKCFKNVCELDLV+NY+KMH+ILD
Sbjct: 61  RVVYKHFATLYFVFVFNSSENELAMLDLIQVFVETLDKCFKNVCELDLVFNYTKMHSILD 120

Query: 121 EIISGGQVLETSSSEVMKAVEEISKLETNSNAINFVSKTVSGWRG 165
           EIISGGQVLETSS+EV+KAVEEISKLET SN+INFVSKTVSGWRG
Sbjct: 121 EIISGGQVLETSSAEVVKAVEEISKLETASNSINFVSKTVSGWRG 165

[Close]

BLAST of MC11g1322.1 vs. ExPASy TrEMBL
Match: A0A6J1GFL2 (AP complex subunit sigma OS=Cucurbita moschata OX=3662 GN=LOC111453507 PE=3 SV=1)

HSP 1 Score: 298 bits (762), Expect = 1.59e-101
Identity = 151/165 (91.52%), Postives = 161/165 (97.58%), Query Frame = 0


Query: 1   MIRAVIVMNTQGKPRFAKFYDFQPVEKQQDLIRSVYGVLSSRAENVSNFVEAESIFGSDS 60
           MIRAVIVMNTQGKPRFAKFYDFQPVEKQQ+LIRSV+GVL SRAEN+SNFVEAESIFG DS
Sbjct: 1   MIRAVIVMNTQGKPRFAKFYDFQPVEKQQELIRSVHGVLCSRAENLSNFVEAESIFGPDS 60

Query: 61  RLVYKHFATLYFVFVFNGSENELAMLDLIQVFVETLDKCFKNVCELDLVYNYSKMHTILD 120
           RLVYKHFATLYFVFVFN SENELAMLDLIQVFVETLDKCFKNVCELDLV++Y+KMH+ILD
Sbjct: 61  RLVYKHFATLYFVFVFNSSENELAMLDLIQVFVETLDKCFKNVCELDLVFHYTKMHSILD 120

Query: 121 EIISGGQVLETSSSEVMKAVEEISKLETNSNAINFVSKTVSGWRG 165
           EIISGGQVLETSS+EV+KAVEEISKLET SN+INFVSKTVSGWRG
Sbjct: 121 EIISGGQVLETSSAEVVKAVEEISKLETASNSINFVSKTVSGWRG 165

[Close]

BLAST of MC11g1322.1 vs. ExPASy TrEMBL
Match: A0A5E4E1T1 (AP complex subunit sigma OS=Prunus dulcis OX=3755 GN=ALMOND_2B010729 PE=3 SV=1)

HSP 1 Score: 281 bits (720), Expect = 4.16e-95
Identity = 143/164 (87.20%), Postives = 155/164 (94.51%), Query Frame = 0


Query: 1   MIRAVIVMNTQGKPRFAKFYDFQPVEKQQDLIRSVYGVLSSRAENVSNFVEAESIFGSDS 60
           MIRAV+V+NTQGKPR AKFY+FQPVEKQQ+LIRSVYGVLSSRAENVSNFV+AESIFG D+
Sbjct: 1   MIRAVMVINTQGKPRLAKFYEFQPVEKQQELIRSVYGVLSSRAENVSNFVDAESIFGPDT 60

Query: 61  RLVYKHFATLYFVFVFNGSENELAMLDLIQVFVETLDKCFKNVCELDLVYNYSKMHTILD 120
           RLVYKHFATLYFVFVF+ SENELAMLDLIQVFVETLDKCFKNVCELD+V NYSKMHT+LD
Sbjct: 61  RLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDVVLNYSKMHTVLD 120

Query: 121 EIISGGQVLETSSSEVMKAVEEISKLETNSNAINFVSKTVSGWR 164
           EII GGQVLETSS+EVMKAVEEISKLET SNAI+ V K+VS WR
Sbjct: 121 EIIFGGQVLETSSTEVMKAVEEISKLETASNAISLVPKSVSAWR 164

[Close]

BLAST of MC11g1322.1 vs. TAIR 10
Match: AT3G50860.1 (Clathrin adaptor complex small chain family protein )

HSP 1 Score: 262.3 bits (669), Expect = 2.6e-70
Identity = 130/165 (78.79%), Postives = 148/165 (89.70%), Query Frame = 0


Query: 1   MIRAVIVMNTQGKPRFAKFYDFQPVEKQQDLIRSVYGVLSSRAENVSNFVEAESIFGSDS 60
           MI+AV++MNTQGKPR AKFYD+ PVEKQQ+LIR V+ VL SR ENVSNF+E ES+FG DS
Sbjct: 1   MIKAVMMMNTQGKPRLAKFYDYLPVEKQQELIRGVFSVLCSRPENVSNFLEIESLFGPDS 60

Query: 61  RLVYKHFATLYFVFVFNGSENELAMLDLIQVFVETLDKCFKNVCELDLVYNYSKMHTILD 120
           RLVYKH+ATLYFV VF+GSENELAMLDLIQV VETLDKCF NVCELD+V+NYSKMH +LD
Sbjct: 61  RLVYKHYATLYFVLVFDGSENELAMLDLIQVLVETLDKCFSNVCELDIVFNYSKMHAVLD 120

Query: 121 EIISGGQVLETSSSEVMKAVEEISKLETNSNAINFVSKTVSGWRG 166
           EI+ GGQVLETSS+EVMKAVEEISKLE  SN+I+ V K+VSGWRG
Sbjct: 121 EIVFGGQVLETSSAEVMKAVEEISKLEAASNSISLVPKSVSGWRG 165

[Close]

BLAST of MC11g1322.1 vs. TAIR 10
Match: AT1G47830.1 (SNARE-like superfamily protein )

HSP 1 Score: 102.4 bits (254), Expect = 3.5e-22
Identity = 55/147 (37.41%), Postives = 91/147 (61.90%), Query Frame = 0


Query: 1   MIRAVIVMNTQGKPRFAKFYDFQPVEKQQDLIRSVYGVLSSRAENVSNFVEAESIFGSDS 60
           MIR +++ N QGK R AK+Y      ++  +   V+ ++ +R    +NFVE  +      
Sbjct: 1   MIRFILLQNRQGKTRLAKYYVPLEESEKHKVEYEVHRLVVNRDAKFTNFVEFRT-----H 60

Query: 61  RLVYKHFATLYFVFVFNGSENELAMLDLIQVFVETLDKCFKNVCELDLVYNYSKMHTILD 120
           +++Y+ +A L+F    + ++NELA L+ I +FVE LD  F NVCELDLV+N+ K++ ILD
Sbjct: 61  KVIYRRYAGLFFSVCVDITDNELAYLESIHLFVEILDHFFSNVCELDLVFNFHKVYLILD 120

Query: 121 EIISGGQVLETSSSEVMKAVEEISKLE 148
           E I  G++ ETS   +++ + E+ KL+
Sbjct: 121 EFILAGELQETSKRAIIERMSELEKLQ 142

[Close]

BLAST of MC11g1322.1 vs. TAIR 10
Match: AT2G17380.1 (associated protein 19 )

HSP 1 Score: 100.1 bits (248), Expect = 1.7e-21
Identity = 54/156 (34.62%), Postives = 95/156 (60.90%), Query Frame = 0


Query: 1   MIRAVIVMNTQGKPRFAKFYDFQPVEKQQDLIRSVYGVLSSRAENVSNFVEAESIFGSDS 60
           MI  V++++ QGK R  K+Y     +++  +IR + GV+ +R   + NF+E         
Sbjct: 1   MIHFVLLVSRQGKVRLTKWYSPYTQKERSKVIRELSGVILNRGPKLCNFIEWRGY----- 60

Query: 61  RLVYKHFATLYFVFVFNGSENELAMLDLIQVFVETLDKCFKNVCELDLVYNYSKMHTILD 120
           ++VYK +A+LYF    + ++NEL +L++I  +VE LD+ F +VCELDL++N+ K + ILD
Sbjct: 61  KVVYKRYASLYFCMCIDEADNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILD 120

Query: 121 EIISGGQVLETSSSEVMKAVE------EISKLETNS 151
           E++  G++ E+S   V + +       E++K E +S
Sbjct: 121 ELLIAGELQESSKKTVARIISAQDQLVEVAKEEASS 151

[Close]

BLAST of MC11g1322.1 vs. TAIR 10
Match: AT4G35410.2 (Clathrin adaptor complex small chain family protein )

HSP 1 Score: 100.1 bits (248), Expect = 1.7e-21
Identity = 55/156 (35.26%), Postives = 94/156 (60.26%), Query Frame = 0


Query: 1   MIRAVIVMNTQGKPRFAKFYDFQPVEKQQDLIRSVYGVLSSRAENVSNFVEAESIFGSDS 60
           MI  V++++ QGK R  K+Y     +++  +IR + GV+ +R   + NFVE         
Sbjct: 1   MIHFVLLVSRQGKVRLTKWYSPYAQKERSKVIRELSGVILNRGPKLCNFVEWRGY----- 60

Query: 61  RLVYKHFATLYFVFVFNGSENELAMLDLIQVFVETLDKCFKNVCELDLVYNYSKMHTILD 120
           ++VYK +A+LYF    +  +NEL +L++I  +VE LD+ F +VCELDL++N+ K + ILD
Sbjct: 61  KVVYKRYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILD 120

Query: 121 EIISGGQVLETSSSEVMKAVE------EISKLETNS 151
           E++  G++ E+S   V + +       E++K E +S
Sbjct: 121 ELLIAGELQESSKKTVARIISAQDQLVEVAKEEASS 151

[Close]

BLAST of MC11g1322.1 vs. TAIR 10
Match: AT2G19790.1 (SNARE-like superfamily protein )

HSP 1 Score: 97.4 bits (241), Expect = 1.1e-20
Identity = 47/144 (32.64%), Postives = 93/144 (64.58%), Query Frame = 0


Query: 2   IRAVIVMNTQGKPRFAKFYDFQPVEKQQDLIRSVYGVLSSRAENVSNFVEAESIFGSDSR 61
           IR ++++N QG+ R A++Y++  +E+++ L   +     +R +   +FVE  +      +
Sbjct: 3   IRFILMVNKQGQTRLAQYYEWLTLEERRALEGEIVRKCLARNDQQCSFVEHRNY-----K 62

Query: 62  LVYKHFATLYFVFVFNGSENELAMLDLIQVFVETLDKCFKNVCELDLVYNYSKMHTILDE 121
           +VY+ +A+L+F+   +  ENELA+L+ I + VET+DK F NVCELD++++  K H +L+E
Sbjct: 63  IVYRRYASLFFMVGVDDDENELAILEFIHLLVETMDKHFGNVCELDIMFHLEKAHFMLEE 122

Query: 122 IISGGQVLETSSSEVMKAVEEISK 146
           ++  G ++ETS + ++  ++ + K
Sbjct: 123 MVMNGCIVETSKANILSPIQLMDK 141

The following BLAST results are available for this feature:

BLAST of MC11g1322.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZ37	3.7e-69	78.79	AP-3 complex subunit sigma OS=Arabidopsis thaliana OX=3702 GN=At3g50860 PE=2 SV=...	[more]
Q2YDH6	5.2e-39	52.03	AP-3 complex subunit sigma-1 OS=Bos taurus OX=9913 GN=AP3S1 PE=2 SV=1	[more]
Q92572	5.2e-39	52.03	AP-3 complex subunit sigma-1 OS=Homo sapiens OX=9606 GN=AP3S1 PE=1 SV=1	[more]
Q9DCR2	5.2e-39	52.03	AP-3 complex subunit sigma-1 OS=Mus musculus OX=10090 GN=Ap3s1 PE=1 SV=2	[more]
Q1JQA3	6.7e-39	49.03	AP-3 complex subunit sigma-2 OS=Bos taurus OX=9913 GN=AP3S2 PE=2 SV=1	[more]

BLAST of MC11g1322.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159031.1	6.68e-110	99.39	AP-3 complex subunit sigma [Momordica charantia] >XP_022159032.1 AP-3 complex su...	[more]
XP_008452384.1	2.41e-103	92.73	PREDICTED: AP-3 complex subunit sigma [Cucumis melo] >XP_008452386.1 PREDICTED: ...	[more]
XP_038893159.1	1.39e-102	93.94	AP-3 complex subunit sigma [Benincasa hispida] >XP_038893161.1 AP-3 complex subu...	[more]
KAG6603975.1	1.98e-102	92.73	AP-3 complex subunit sigma, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]
XP_022978569.1	5.68e-102	92.12	AP-3 complex subunit sigma-like [Cucurbita maxima]	[more]

BLAST of MC11g1322.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E2P6	3.24e-110	99.39	AP complex subunit sigma OS=Momordica charantia OX=3673 GN=LOC111025475 PE=3 SV=...	[more]
A0A1S3BT37	1.17e-103	92.73	AP complex subunit sigma OS=Cucumis melo OX=3656 GN=LOC103493438 PE=3 SV=1	[more]
A0A6J1IUE1	2.75e-102	92.12	AP complex subunit sigma OS=Cucurbita maxima OX=3661 GN=LOC111478508 PE=3 SV=1	[more]
A0A6J1GFL2	1.59e-101	91.52	AP complex subunit sigma OS=Cucurbita moschata OX=3662 GN=LOC111453507 PE=3 SV=1	[more]
A0A5E4E1T1	4.16e-95	87.20	AP complex subunit sigma OS=Prunus dulcis OX=3755 GN=ALMOND_2B010729 PE=3 SV=1	[more]

BLAST of MC11g1322.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50860.1	2.6e-70	78.79	Clathrin adaptor complex small chain family protein	[more]
AT1G47830.1	3.5e-22	37.41	SNARE-like superfamily protein	[more]
AT2G17380.1	1.7e-21	34.62	associated protein 19	[more]
AT4G35410.2	1.7e-21	35.26	Clathrin adaptor complex small chain family protein	[more]
AT2G19790.1	1.1e-20	32.64	SNARE-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 129..149
None	No IPR available	GENE3D	3.30.450.60		coord: 1..160 e-value: 2.4E-59 score: 201.6
None	No IPR available	PANTHER	PTHR11753:SF42	AP COMPLEX SUBUNIT SIGMA	coord: 1..157
IPR016635	Adaptor protein complex, sigma subunit	PIRSF	PIRSF015588	AP_complex_sigma	coord: 1..157 e-value: 5.0E-55 score: 183.5
IPR016635	Adaptor protein complex, sigma subunit	PANTHER	PTHR11753	ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY	coord: 1..157
IPR022775	AP complex, mu/sigma subunit	PFAM	PF01217	Clat_adaptor_s	coord: 1..146 e-value: 8.4E-49 score: 165.2
IPR000804	Clathrin adaptor complex, small chain	PROSITE	PS00989	CLAT_ADAPTOR_S	coord: 62..72
IPR027155	AP-3 complex subunit sigma	CDD	cd14834	AP3_sigma	coord: 1..145 e-value: 9.99111E-87 score: 248.682
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 1..145

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC11g1322	MC11g1322	gene

The following utr5 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g1322.1-utr5	MC11g1322.1-utr5-MC11:16086697..16086999	utr5
MC11g1322.1-utr5	MC11g1322.1-utr5-MC11:16088046..16088207	utr5
MC11g1322.1-utr5	MC11g1322.1-utr5-MC11:16093056..16093196	utr5

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g1322.1-cds	MC11g1322.1-cds-MC11:16093197..16093265	CDS
MC11g1322.1-cds	MC11g1322.1-cds-MC11:16093344..16093386	CDS
MC11g1322.1-cds	MC11g1322.1-cds-MC11:16093519..16093580	CDS
MC11g1322.1-cds	MC11g1322.1-cds-MC11:16093881..16093977	CDS
MC11g1322.1-cds	MC11g1322.1-cds-MC11:16094418..16094488	CDS
MC11g1322.1-cds	MC11g1322.1-cds-MC11:16095262..16095353	CDS
MC11g1322.1-cds	MC11g1322.1-cds-MC11:16095443..16095506	CDS

The following utr3 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g1322.1-utr3	MC11g1322.1-utr3-MC11:16095507..16095731	utr3

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC11g1322.1	MC11g1322.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006896	Golgi to vacuole transport
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0015031	protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0030123	AP-3 adaptor complex
cellular_component	GO:0030117	membrane coat
cellular_component	GO:0030659	cytoplasmic vesicle membrane