MC11g0990.1 (mRNA) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: utr5polypeptideCDSutr3 Hold the cursor over a type above to highlight its positions in the sequence below.TTGGTAGAAAAAAAACTTAATCAATTGAAAGTAAGCTCAAACTATTGAAATCAATTTGCTTTTTATCTCAATTATTTTTTCTTTATTATTATATATATTTTATAATTTGGTTTGTAAATTTGTAGTGCTGTATTTAATTGGTCCTAAATTTTCAAAAAAATGTCTTATAAATTATTAAATTTTCAACGTATTGTCTTATAGATTTTAAAACATGTTTAGTAAAAGTTTTTAAAGCTCGTTATGTATATATGTAATTTTTTTTGGTAAAAATCTCTTATCTTATTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTTTTTTTTGACCTTTTAATTTTGGGCATAATTTCATAAGGTTATCCAAACGTACACCGAGATCGGAAACACCGCAAAATGCCGTAGCAAACAGTTTCTCTATCTCTCACTCTCCGCCGGATAAAATTCCGATTTCATTTCACAATGAATTGCATCACCTCCTCCGTTCAATTTCCTCTTCTCCGATTGCATCTCAAGCCAAATCGGCGGCCGCAGCAGCAGCAGAACTCGCCGTCTCACTCGCCGATTCTCCATCTCTTCCGCCAGATTTACATTTCTCCACAGACGCAACGATTCGCTTCACTGAAAGGCAACGCAATTCCTCCGAGCTCTCTAGTTCTCGCATCCAGCACTATTCCTCCGTCGCAGTCCGGCGACGCATCGGTCCTCCTCCCGACAGGGTTTGCCACTTCTCTCCTTCTTTAGATTCCAAATTACGCGGAAATCTGAGGCAATCTGAGGTTAATTTCTTCATCTCGTTTGTTATTTCGGCAAATTACGCAGCGGCGTGCTTCTAATTGCGTATTTCATAGCTAATTTCATCGTGCCGGAGTTGATTATGAAATCGTACCGATCCGATGAGAGCGAAGAAAATGCTCGCGCGGAAGACGGAGAATCGGGCGCGAGTGAGGGGGAAAGCCGAGCCGGATCGTTCGGGAGGAAGAAACAGGGCTTTGGCGGCAACAAGAGATGACGGAACTTGAAGGCGAAGCCATGGAATTGTTTTGAATTGAATTCTGTAAGTAAATCTCAATCTTCTTTAACCTCTTTAGGTACTTTCTGTATCGAGAATTCAGAATTGTGGTGCAGAGGATAGGGAATTGGGGATCAGATTCTGTTCTTTCTTTTGTCATTGGATTGAAAACAAGATTACTGTTTGTTAGTTTGAAAAAATCGTAAGATTATTTATGAAAAATCGAATCTGGTAATTAATGGATTTTTTTTCATGATTTTTATAGATATTTATAAGGTTA TTGGTAGAAAAAAAACTTAATCAATTGAAAGTAAGCTCAAACTATTGAAATCAATTTGCTTTTTATCTCAATTATTTTTTCTTTATTATTATATATATTTTATAATTTGGTTTGTAAATTTGTAGTGCTGTATTTAATTGGTCCTAAATTTTCAAAAAAATGTCTTATAAATTATTAAATTTTCAACGTATTGTCTTATAGATTTTAAAACATGTTTAGTAAAAGTTTTTAAAGCTCGTTATGTATATATGTAATTTTTTTTGGTAAAAATCTCTTATCTTATTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTTTTTTTTGACCTTTTAATTTTGGGCATAATTTCATAAGGTTATCCAAACGTACACCGAGATCGGAAACACCGCAAAATGCCGTAGCAAACAGTTTCTCTATCTCTCACTCTCCGCCGGATAAAATTCCGATTTCATTTCACAATGAATTGCATCACCTCCTCCGTTCAATTTCCTCTTCTCCGATTGCATCTCAAGCCAAATCGGCGGCCGCAGCAGCAGCAGAACTCGCCGTCTCACTCGCCGATTCTCCATCTCTTCCGCCAGATTTACATTTCTCCACAGACGCAACGATTCGCTTCACTGAAAGGCAACGCAATTCCTCCGAGCTCTCTAGTTCTCGCATCCAGCACTATTCCTCCGTCGCAGTCCGGCGACGCATCGGTCCTCCTCCCGACAGGCGGCGTGCTTCTAATTGCGTATTTCATAGCTAATTTCATCGTGCCGGAGTTGATTATGAAATCGTACCGATCCGATGAGAGCGAAGAAAATGCTCGCGCGGAAGACGGAGAATCGGGCGCGAGTGAGGGGGAAAGCCGAGCCGGATCGTTCGGGAGGAAGAAACAGGGCTTTGGCGGCAACAAGAGATGACGGAACTTGAAGGCGAAGCCATGGAATTGTTTTGAATTGAATTCTGTAAGTAAATCTCAATCTTCTTTAACCTCTTTAGGTACTTTCTGTATCGAGAATTCAGAATTGTGGTGCAGAGGATAGGGAATTGGGGATCAGATTCTGTTCTTTCTTTTGTCATTGGATTGAAAACAAGATTACTGTTTGTTAGTTTGAAAAAATCGTAAGATTATTTATGAAAAATCGAATCTGGTAATTAATGGATTTTTTTTCATGATTTTTATAGATATTTATAAGGTTA ATGAATTGCATCACCTCCTCCGTTCAATTTCCTCTTCTCCGATTGCATCTCAAGCCAAATCGGCGGCCGCAGCAGCAGCAGAACTCGCCGTCTCACTCGCCGATTCTCCATCTCTTCCGCCAGATTTACATTTCTCCACAGACGCAACGATTCGCTTCACTGAAAGGCAACGCAATTCCTCCGAGCTCTCTAGTTCTCGCATCCAGCACTATTCCTCCGTCGCAGTCCGGCGACGCATCGGTCCTCCTCCCGACAGGCGGCGTGCTTCTAATTGCGTATTTCATAGCTAATTTCATCGTGCCGGAGTTGATTATGAAATCGTACCGATCCGATGAGAGCGAAGAAAATGCTCGCGCGGAAGACGGAGAATCGGGCGCGAGTGAGGGGGAAAGCCGAGCCGGATCGTTCGGGAGGAAGAAACAGGGCTTTGGCGGCAACAAGAGATGA MNCITSSVQFPLLRLHLKPNRRPQQQQNSPSHSPILHLFRQIYISPQTQRFASLKGNAIPPSSLVLASSTIPPSQSGDASVLLPTGGVLLIAYFIANFIVPELIMKSYRSDESEENARAEDGESGASEGESRAGSFGRKKQGFGGNKR Homology
BLAST of MC11g0990.1 vs. NCBI nr
Match: XP_038897194.1 (uncharacterized protein LOC120085329 [Benincasa hispida]) HSP 1 Score: 169 bits (429), Expect = 3.28e-51 Identity = 103/148 (69.59%), Postives = 112/148 (75.68%), Query Frame = 0
BLAST of MC11g0990.1 vs. NCBI nr
Match: XP_023525256.1 (uncharacterized protein LOC111788910 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 163 bits (412), Expect = 1.96e-48 Identity = 98/148 (66.22%), Postives = 109/148 (73.65%), Query Frame = 0
BLAST of MC11g0990.1 vs. NCBI nr
Match: XP_022940449.1 (uncharacterized protein LOC111446047 [Cucurbita moschata] >KAG7037370.1 hypothetical protein SDJN02_00995 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 159 bits (401), Expect = 9.19e-47 Identity = 96/148 (64.86%), Postives = 107/148 (72.30%), Query Frame = 0
BLAST of MC11g0990.1 vs. NCBI nr
Match: XP_022981640.1 (uncharacterized protein LOC111480699 [Cucurbita maxima]) HSP 1 Score: 154 bits (389), Expect = 7.82e-45 Identity = 96/148 (64.86%), Postives = 106/148 (71.62%), Query Frame = 0
BLAST of MC11g0990.1 vs. NCBI nr
Match: KAG6585878.1 (hypothetical protein SDJN03_18611, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 154 bits (388), Expect = 1.65e-44 Identity = 93/145 (64.14%), Postives = 104/145 (71.72%), Query Frame = 0
BLAST of MC11g0990.1 vs. ExPASy TrEMBL
Match: A0A6J1FK57 (uncharacterized protein LOC111446047 OS=Cucurbita moschata OX=3662 GN=LOC111446047 PE=4 SV=1) HSP 1 Score: 159 bits (401), Expect = 4.45e-47 Identity = 96/148 (64.86%), Postives = 107/148 (72.30%), Query Frame = 0
BLAST of MC11g0990.1 vs. ExPASy TrEMBL
Match: A0A6J1J030 (uncharacterized protein LOC111480699 OS=Cucurbita maxima OX=3661 GN=LOC111480699 PE=4 SV=1) HSP 1 Score: 154 bits (389), Expect = 3.79e-45 Identity = 96/148 (64.86%), Postives = 106/148 (71.62%), Query Frame = 0
BLAST of MC11g0990.1 vs. ExPASy TrEMBL
Match: A0A0A0K9M2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G420170 PE=4 SV=1) HSP 1 Score: 119 bits (299), Expect = 4.41e-32 Identity = 68/113 (60.18%), Postives = 83/113 (73.45%), Query Frame = 0
BLAST of MC11g0990.1 vs. ExPASy TrEMBL
Match: A0A5D3BI04 (Glutathione transport system permease gsiD OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27427G00010 PE=4 SV=1) HSP 1 Score: 112 bits (280), Expect = 3.44e-29 Identity = 68/117 (58.12%), Postives = 83/117 (70.94%), Query Frame = 0
BLAST of MC11g0990.1 vs. ExPASy TrEMBL
Match: B9SV97 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1303160 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.00e-11 Identity = 39/72 (54.17%), Postives = 51/72 (70.83%), Query Frame = 0
BLAST of MC11g0990.1 vs. TAIR 10
Match: AT1G50732.1 (unknown protein. ) HSP 1 Score: 47.0 bits (110), Expect = 1.5e-05 Identity = 20/48 (41.67%), Postives = 31/48 (64.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following utr3 feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following utr5 feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|